Stats for order Gadiformes
Browsing families:
| Stats for total mtDNA (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.0 - 48.3% | 51.7 - 59.0% | 4048 - 5373 | 2639 - 2879 | 4281 - 5057 | 4311 - 4778 | 7.0 - 25.0 |
| Median | 43.0% | 57.1% | 4280 | 2802 | 4865 | 4684 | 20.0 |
| Average ± stdev | 43.3 ± 2.2% | 56.6 ± 2.2% | 4400 ± 376 | 2773 ± 78 | 4751 ± 249 | 4614 ± 127 | 17.7 ± 6.1 |
| Coefficient of variation | 0.05 | 0.04 | 0.09 | 0.03 | 0.05 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.14 | -0.13 | 0.22 | -0.00 | -0.11 | 0.18 | - |
| Pearson p-value (two tailed) |
7.04E-01 | 7.16E-01 | 5.47E-01 | 9.90E-01 | 7.67E-01 | 6.15E-01 | - |
| Stats for total protein-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.9 - 49.4% | 50.6 - 60.1% | 2850 - 3849 | 1667 - 1826 | 2904 - 3768 | 2887 - 3144 | 7.0 - 25.0 |
| Median | 42.7% | 57.7% | 3072 | 1778 | 3571 | 3029 | 20.0 |
| Average ± stdev | 43.1 ± 2.9% | 56.9 ± 2.9% | 3161 ± 287 | 1756 ± 52 | 3474 ± 249 | 3019 ± 73 | 17.7 ± 6.1 |
| Coefficient of variation | 0.07 | 0.05 | 0.09 | 0.03 | 0.07 | 0.02 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.16 | -0.16 | 0.19 | -0.12 | -0.20 | -0.00 | - |
| Pearson p-value (two tailed) |
6.59E-01 | 6.59E-01 | 5.90E-01 | 7.44E-01 | 5.76E-01 | 9.96E-01 | - |
| Stats for D-loop (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.0 - 38.4% | 61.6 - 65.0% | 174 - 206 | 117 - 141 | 270 - 298 | 239 - 273 | 7.0 - 25.0 |
| Median | 36.6% | 63.8% | 184 | 135 | 292 | 266 | 20.0 |
| Average ± stdev | 36.5 ± 1.1% | 63.5 ± 1.1% | 186 ± 11 | 128 ± 8 | 287 ± 9 | 259 ± 11 | 16.7 ± 6.7 |
| Coefficient of variation | 0.03 | 0.02 | 0.06 | 0.07 | 0.03 | 0.04 | 0.40 |
| Pearson correlation coefficient with log10MLS |
0.60 | -0.60 | 0.28 | 0.27 | -0.02 | -0.42 | - |
| Pearson p-value (two tailed) |
2.10E-01 | 2.10E-01 | 5.90E-01 | 6.03E-01 | 9.77E-01 | 4.04E-01 | - |
| Stats for total tRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.3 - 47.2% | 52.8 - 54.6% | 361 - 407 | 303 - 322 | 353 - 376 | 429 - 469 | 7.0 - 25.0 |
| Median | 45.9% | 54.1% | 387 | 318 | 375 | 456 | 20.0 |
| Average ± stdev | 45.9 ± 0.6% | 53.9 ± 0.6% | 387 ± 10 | 315 ± 5 | 372 ± 6 | 454 ± 11 | 17.7 ± 6.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
-0.17 | 0.35 | 0.23 | -0.20 | 0.25 | 0.40 | - |
| Pearson p-value (two tailed) |
6.36E-01 | 3.25E-01 | 5.26E-01 | 5.81E-01 | 4.90E-01 | 2.49E-01 | - |
| Stats for total rRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.0 - 46.3% | 53.7 - 56.0% | 604 - 656 | 540 - 553 | 571 - 610 | 831 - 864 | 7.0 - 25.0 |
| Median | 44.5% | 55.5% | 613 | 550 | 603 | 852 | 20.0 |
| Average ± stdev | 44.5 ± 0.6% | 55.4 ± 0.6% | 616 ± 13 | 548 ± 3 | 599 ± 10 | 851 ± 8 | 17.7 ± 6.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.01 | 0.02 | 0.01 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.03 | 0.00 | 0.13 | -0.42 | -0.08 | 0.07 | - |
| Pearson p-value (two tailed) |
9.37E-01 | 9.95E-01 | 7.27E-01 | 2.26E-01 | 8.17E-01 | 8.51E-01 | - |
| Stats for ATP6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.3 - 48.2% | 51.8 - 62.6% | 174 - 244 | 81 - 96 | 185 - 244 | 169 - 189 | 7.0 - 25.0 |
| Median | 39.4% | 61.1% | 183 | 86 | 239 | 177 | 20.0 |
| Average ± stdev | 40.8 ± 3.8% | 59.2 ± 3.8% | 192 ± 22 | 85 ± 3 | 226 ± 20 | 178 ± 5 | 17.7 ± 6.1 |
| Coefficient of variation | 0.09 | 0.06 | 0.12 | 0.05 | 0.09 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.23 | -0.23 | 0.25 | 0.06 | -0.30 | 0.14 | - |
| Pearson p-value (two tailed) |
5.21E-01 | 5.16E-01 | 4.89E-01 | 8.59E-01 | 3.95E-01 | 7.07E-01 | - |
| Stats for ATP8 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 45.2% | 54.8 - 60.7% | 51 - 59 | 15 - 17 | 38 - 49 | 51 - 54 | 7.0 - 25.0 |
| Median | 42.3% | 58.3% | 55 | 16 | 45 | 53 | 20.0 |
| Average ± stdev | 42.0 ± 1.7% | 58.0 ± 1.7% | 54 ± 2 | 15 ± 0 | 44 ± 2 | 52 ± 1 | 17.7 ± 6.1 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.04 | 0.07 | 0.02 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.03 | -0.03 | -0.02 | 0.25 | -0.08 | 0.13 | - |
| Pearson p-value (two tailed) |
9.24E-01 | 9.24E-01 | 9.51E-01 | 4.92E-01 | 8.31E-01 | 7.21E-01 | - |
| Stats for COX1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 50.0% | 50.0 - 59.1% | 368 - 492 | 265 - 290 | 408 - 517 | 368 - 406 | 7.0 - 25.0 |
| Median | 42.7% | 57.3% | 388 | 276 | 492 | 395 | 20.0 |
| Average ± stdev | 43.8 ± 2.8% | 56.2 ± 2.8% | 403 ± 35 | 275 ± 7 | 481 ± 31 | 391 ± 11 | 17.7 ± 6.1 |
| Coefficient of variation | 0.06 | 0.05 | 0.09 | 0.03 | 0.06 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.19 | -0.19 | 0.19 | 0.15 | -0.20 | -0.12 | - |
| Pearson p-value (two tailed) |
6.07E-01 | 6.07E-01 | 6.05E-01 | 6.70E-01 | 5.79E-01 | 7.40E-01 | - |
| Stats for COX2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.4 - 47.0% | 53.0 - 60.6% | 163 - 201 | 103 - 124 | 178 - 215 | 188 - 209 | 7.0 - 25.0 |
| Median | 40.4% | 59.6% | 171 | 109 | 208 | 205 | 20.0 |
| Average ± stdev | 41.4 ± 2.5% | 58.6 ± 2.5% | 177 ± 12 | 109 ± 5 | 202 ± 11 | 202 ± 5 | 17.7 ± 6.1 |
| Coefficient of variation | 0.06 | 0.04 | 0.07 | 0.05 | 0.05 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.30 | -0.30 | 0.38 | -0.05 | -0.41 | -0.10 | - |
| Pearson p-value (two tailed) |
4.03E-01 | 4.03E-01 | 2.75E-01 | 8.88E-01 | 2.34E-01 | 7.76E-01 | - |
| Stats for COX3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.1 - 51.0% | 49.0 - 58.9% | 191 - 262 | 128 - 139 | 192 - 260 | 193 - 209 | 7.0 - 25.0 |
| Median | 43.9% | 56.4% | 211 | 133 | 247 | 202 | 20.0 |
| Average ± stdev | 44.3 ± 2.8% | 55.7 ± 2.8% | 215 ± 19 | 133 ± 3 | 237 ± 17 | 200 ± 5 | 17.7 ± 6.1 |
| Coefficient of variation | 0.06 | 0.05 | 0.09 | 0.02 | 0.08 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.19 | -0.19 | 0.23 | -0.17 | -0.18 | -0.15 | - |
| Pearson p-value (two tailed) |
6.06E-01 | 5.99E-01 | 5.25E-01 | 6.37E-01 | 6.21E-01 | 6.80E-01 | - |
| Stats for CYTB (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.2 - 48.2% | 51.8 - 60.8% | 275 - 366 | 165 - 186 | 319 - 415 | 270 - 301 | 7.0 - 25.0 |
| Median | 42.3% | 58.0% | 305 | 181 | 379 | 279 | 20.0 |
| Average ± stdev | 42.6 ± 2.7% | 57.4 ± 2.7% | 309 ± 24 | 177 ± 6 | 374 ± 25 | 281 ± 9 | 17.7 ± 6.1 |
| Coefficient of variation | 0.06 | 0.05 | 0.08 | 0.04 | 0.07 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.10 | -0.10 | 0.17 | -0.29 | -0.20 | 0.15 | - |
| Pearson p-value (two tailed) |
7.86E-01 | 7.86E-01 | 6.43E-01 | 4.18E-01 | 5.79E-01 | 6.76E-01 | - |
| Stats for ND1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.0 - 49.6% | 50.4 - 59.0% | 241 - 325 | 147 - 169 | 263 - 342 | 221 - 242 | 7.0 - 25.0 |
| Median | 44.7% | 56.2% | 270 | 160 | 316 | 233 | 20.0 |
| Average ± stdev | 44.4 ± 2.6% | 55.6 ± 2.6% | 273 ± 22 | 159 ± 6 | 309 ± 21 | 232 ± 6 | 17.7 ± 6.1 |
| Coefficient of variation | 0.06 | 0.05 | 0.08 | 0.04 | 0.07 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.11 | -0.11 | 0.12 | -0.01 | -0.15 | 0.08 | - |
| Pearson p-value (two tailed) |
7.60E-01 | 7.55E-01 | 7.46E-01 | 9.70E-01 | 6.69E-01 | 8.24E-01 | - |
| Stats for ND2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.9 - 49.7% | 50.3 - 61.1% | 273 - 377 | 132 - 156 | 268 - 336 | 258 - 304 | 7.0 - 25.0 |
| Median | 41.8% | 58.3% | 292 | 143 | 329 | 285 | 20.0 |
| Average ± stdev | 42.7 ± 3.5% | 57.3 ± 3.5% | 303 ± 32 | 143 ± 8 | 316 ± 23 | 282 ± 13 | 17.7 ± 6.1 |
| Coefficient of variation | 0.08 | 0.06 | 0.11 | 0.06 | 0.07 | 0.05 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.22 | -0.21 | 0.24 | -0.03 | -0.27 | -0.08 | - |
| Pearson p-value (two tailed) |
5.49E-01 | 5.52E-01 | 5.12E-01 | 9.24E-01 | 4.47E-01 | 8.23E-01 | - |
| Stats for ND3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.7 - 49.6% | 50.4 - 61.3% | 85 - 118 | 48 - 61 | 107 - 132 | 69 - 85 | 7.0 - 25.0 |
| Median | 44.1% | 57.3% | 94 | 55 | 121 | 81 | 20.0 |
| Average ± stdev | 43.6 ± 3.2% | 56.4 ± 3.2% | 97 ± 10 | 54 ± 3 | 118 ± 8 | 78 ± 4 | 17.7 ± 6.1 |
| Coefficient of variation | 0.07 | 0.06 | 0.11 | 0.07 | 0.07 | 0.06 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.20 | -0.20 | 0.29 | -0.25 | -0.21 | -0.10 | - |
| Pearson p-value (two tailed) |
5.83E-01 | 5.83E-01 | 4.10E-01 | 4.87E-01 | 5.60E-01 | 7.79E-01 | - |
| Stats for ND4 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.0 - 50.2% | 49.8 - 62.0% | 321 - 484 | 196 - 221 | 344 - 487 | 342 - 374 | 7.0 - 25.0 |
| Median | 42.1% | 58.7% | 366 | 208 | 450 | 360 | 20.0 |
| Average ± stdev | 42.5 ± 3.8% | 57.5 ± 3.8% | 379 ± 47 | 207 ± 7 | 436 ± 41 | 358 ± 10 | 17.7 ± 6.1 |
| Coefficient of variation | 0.09 | 0.07 | 0.12 | 0.03 | 0.10 | 0.03 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | 0.15 | 0.14 | -0.12 | -0.32 | - |
| Pearson p-value (two tailed) |
6.46E-01 | 6.46E-01 | 6.82E-01 | 7.01E-01 | 7.32E-01 | 3.65E-01 | - |
| Stats for ND4L (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.1 - 48.5% | 51.5 - 57.9% | 82 - 98 | 40 - 49 | 81 - 99 | 68 - 76 | 7.0 - 25.0 |
| Median | 46.8% | 53.2% | 93 | 46 | 89 | 69 | 20.0 |
| Average ± stdev | 46.2 ± 2.1% | 53.8 ± 2.1% | 91 ± 4 | 45 ± 2 | 89 ± 5 | 70 ± 2 | 17.7 ± 6.1 |
| Coefficient of variation | 0.05 | 0.04 | 0.05 | 0.05 | 0.06 | 0.04 | 0.35 |
| Pearson correlation coefficient with log10MLS |
-0.10 | 0.10 | -0.07 | -0.07 | -0.04 | 0.30 | - |
| Pearson p-value (two tailed) |
7.93E-01 | 7.93E-01 | 8.54E-01 | 8.49E-01 | 9.10E-01 | 4.05E-01 | - |
| Stats for ND5 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.4 - 49.8% | 50.2 - 60.6% | 466 - 639 | 250 - 284 | 453 - 588 | 470 - 538 | 7.0 - 25.0 |
| Median | 41.5% | 58.7% | 491 | 272 | 572 | 511 | 20.0 |
| Average ± stdev | 42.2 ± 3.2% | 57.7 ± 3.2% | 507 ± 50 | 269 ± 10 | 554 ± 40 | 507 ± 18 | 17.7 ± 6.1 |
| Coefficient of variation | 0.07 | 0.05 | 0.10 | 0.04 | 0.07 | 0.04 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.06 | -0.06 | 0.17 | -0.46 | -0.17 | 0.17 | - |
| Pearson p-value (two tailed) |
8.61E-01 | 8.63E-01 | 6.48E-01 | 1.86E-01 | 6.45E-01 | 6.31E-01 | - |
| Stats for ND6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.1 - 49.6% | 50.4 - 55.9% | 152 - 189 | 74 - 89 | 74 - 99 | 181 - 212 | 7.0 - 25.0 |
| Median | 46.0% | 54.4% | 156 | 82 | 94 | 194 | 20.0 |
| Average ± stdev | 46.1 ± 2.2% | 53.9 ± 2.2% | 161 ± 10 | 81 ± 5 | 89 ± 8 | 194 ± 8 | 17.7 ± 6.1 |
| Coefficient of variation | 0.05 | 0.04 | 0.07 | 0.07 | 0.09 | 0.04 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.12 | -0.12 | 0.17 | 0.08 | -0.14 | 0.09 | - |
| Pearson p-value (two tailed) |
7.31E-01 | 7.31E-01 | 6.40E-01 | 8.23E-01 | 6.98E-01 | 7.95E-01 | - |
| Stats for 12S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.2 - 48.5% | 51.5 - 54.8% | 220 - 246 | 205 - 212 | 195 - 217 | 291 - 306 | 7.0 - 25.0 |
| Median | 45.6% | 54.4% | 225 | 209 | 215 | 304 | 20.0 |
| Average ± stdev | 45.8 ± 1.0% | 54.2 ± 1.0% | 226 ± 6 | 208 ± 1 | 212 ± 6 | 302 ± 4 | 17.7 ± 6.1 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.01 | 0.03 | 0.01 | 0.35 |
| Pearson correlation coefficient with log10MLS |
0.13 | -0.13 | 0.07 | 0.15 | -0.05 | -0.33 | - |
| Pearson p-value (two tailed) |
7.11E-01 | 7.27E-01 | 8.52E-01 | 6.72E-01 | 8.97E-01 | 3.57E-01 | - |
| Stats for 16S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.3 - 45.0% | 55.0 - 56.7% | 384 - 410 | 335 - 347 | 376 - 393 | 540 - 558 | 7.0 - 25.0 |
| Median | 43.7% | 56.3% | 389 | 340 | 388 | 550 | 20.0 |
| Average ± stdev | 43.8 ± 0.5% | 56.2 ± 0.5% | 390 ± 7 | 340 ± 3 | 387 ± 4 | 548 ± 5 | 17.7 ± 6.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.35 |
| Pearson correlation coefficient with log10MLS |
-0.10 | 0.16 | 0.18 | -0.57 | -0.13 | 0.36 | - |
| Pearson p-value (two tailed) |
7.81E-01 | 6.62E-01 | 6.21E-01 | 8.66E-02 | 7.27E-01 | 3.13E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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