Export data of 16S rRNA gene for order Rodentia

Species (N=27) GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Acomys cahirinus 38.8 61.2 337 268 354 600 5.9
Apodemus peninsulae 33.8 66.2 270 261 439 603 4.4
Callosciurus erythraeus 38.1 61.9 337 265 401 575 17.0
Castor canadensis 39.8 60.2 361 266 369 581 23.4
Cavia porcellus 36.5 63.5 304 268 408 585 12.0
Chinchilla lanigera 39.2 60.8 344 265 355 591 17.2
Cynomys ludovicianus 35.6 64.4 303 255 429 580 11.0
Heterocephalus glaber 37.5 62.5 322 260 361 608 31.0
Ictidomys tridecemlineatus 35.8 64.2 303 258 433 571 7.9
Jaculus jaculus 39.1 60.9 322 294 403 557 7.3
Meriones unguiculatus 35.6 64.4 296 267 433 585 6.3
Mesocricetus auratus 36.9 63.1 306 270 407 579 3.9
Mus musculus 35.4 64.6 304 256 417 605 4.0
Nannospalax ehrenbergi 37.9 62.1 334 263 372 607 20.2
Octodon degus 35.9 64.1 303 260 409 598 14.0
Petaurista alborufus 38.2 61.8 340 262 399 573 21.4
Pseudomys chapmani 35.2 64.7 303 248 394 618 6.8
Pteromys volans 35.1 64.9 295 254 431 585 11.4
Rattus fuscipes 37.2 62.8 319 262 379 603 5.3
Rattus lutreolus 37.3 62.7 323 260 378 604 4.4
Rattus norvegicus 36.9 63.1 324 256 385 606 3.8
Rattus rattus 35.7 64.3 303 257 400 609 4.2
Ratufa bicolor 37.5 62.5 327 267 402 586 19.0
Sciurus vulgaris 36.4 63.6 314 259 427 574 14.8
Spalacopus cyanus 35.3 64.7 302 253 409 607 10.8
Tamias sibiricus 35.2 64.8 307 255 420 613 9.6
Thryonomys swinderianus 35.9 64.1 303 257 393 607 5.4
Export data
Other sections:
Total mtDNA
Total protein-coding genes
D-loop
Total tRNA-coding genes
Total rRNA-coding genes
ATP6
ATP8
COX1
COX2
COX3
CYTB
ND1
ND2
ND3
ND4
ND4L
ND5
ND6
12S rRNA gene
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.