Viewing data for Octodon degus


Scientific name Octodon degus
Common name Degus
Maximum lifespan 14.00 years (Octodon degus@AnAge)

Total mtDNA (size: 16798 bases) GC AT G C A T
Base content (bases) 6283 10505 4165 2118 4786 5719
Base content per 1 kb (bases) 374 625 248 126 285 340
Base content (%) 37.4% 62.5%
Total protein-coding genes (size: 11350 bases) GC AT G C A T
Base content (bases) 4267 7073 2988 1279 3348 3725
Base content per 1 kb (bases) 376 623 263 113 295 328
Base content (%) 37.6% 62.3%
D-loop (size: 1307 bases) GC AT G C A T
Base content (bases) 509 798 339 170 331 467
Base content per 1 kb (bases) 389 611 259 130 253 357
Base content (%) 38.9% 61.1%
Total tRNA-coding genes (size: 1505 bases) GC AT G C A T
Base content (bases) 524 981 298 226 439 542
Base content per 1 kb (bases) 348 652 198 150 292 360
Base content (%) 34.8% 65.2%
Total rRNA-coding genes (size: 2523 bases) GC AT G C A T
Base content (bases) 930 1593 509 421 642 951
Base content per 1 kb (bases) 369 631 202 167 254 377
Base content (%) 36.9% 63.1%
12S rRNA gene (size: 953 bases) GC AT G C A T
Base content (bases) 367 586 206 161 233 353
Base content per 1 kb (bases) 385 615 216 169 244 370
Base content (%) 38.5% 61.5%
16S rRNA gene (size: 1570 bases) GC AT G C A T
Base content (bases) 563 1007 303 260 409 598
Base content per 1 kb (bases) 359 641 193 166 261 381
Base content (%) 35.9% 64.1%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 246 435 174 72 220 215
Base content per 1 kb (bases) 361 639 256 106 323 316
Base content (%) 36.1% 63.9%
ATP8 (size: 207 bases) GC AT G C A T
Base content (bases) 61 146 52 9 57 89
Base content per 1 kb (bases) 295 705 251 43 275 430
Base content (%) 29.5% 70.5%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 599 946 347 252 486 460
Base content per 1 kb (bases) 388 612 225 163 315 298
Base content (%) 38.8% 61.2%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 244 440 153 91 206 234
Base content per 1 kb (bases) 357 643 224 133 301 342
Base content (%) 35.7% 64.3%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 318 466 207 111 235 231
Base content per 1 kb (bases) 406 594 264 142 300 295
Base content (%) 40.6% 59.4%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 454 686 314 140 327 359
Base content per 1 kb (bases) 398 602 275 123 287 315
Base content (%) 39.8% 60.2%
ND1 (size: 958 bases) GC AT G C A T
Base content (bases) 367 591 267 100 287 304
Base content per 1 kb (bases) 383 617 279 104 300 317
Base content (%) 38.3% 61.7%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 376 666 295 81 288 378
Base content per 1 kb (bases) 361 639 283 78 276 363
Base content (%) 36.1% 63.9%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 123 213 93 30 108 105
Base content per 1 kb (bases) 355 616 269 87 312 303
Base content (%) 35.5% 61.6%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 502 876 366 136 406 470
Base content per 1 kb (bases) 364 636 266 99 295 341
Base content (%) 36.4% 63.6%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 103 194 68 35 106 88
Base content per 1 kb (bases) 347 653 229 118 357 296
Base content (%) 34.7% 65.3%
ND5 (size: 1812 bases) GC AT G C A T
Base content (bases) 700 1112 516 184 528 584
Base content per 1 kb (bases) 386 614 285 102 291 322
Base content (%) 38.6% 61.4%
ND6 (size: 534 bases) GC AT G C A T
Base content (bases) 191 343 149 42 112 231
Base content per 1 kb (bases) 358 642 279 79 210 433
Base content (%) 35.8% 64.2%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 12 (5.31%)
Threonine (Thr, T)
n = 20 (8.85%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.54%)
Leucine (Leu, L)
n = 45 (19.91%)
Isoleucine (Ile, I)
n = 28 (12.39%)
Methionine (Met, M)
n = 15 (6.64%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 11 (4.87%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 9 (3.98%)
Glutamine (Gln, Q)
n = 7 (3.1%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 6 (2.65%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 9 13 8 3 16 2 16 6 1 3 1 4 0 4 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 5 5 8 0 1 3 4 3 6 3 5 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 9 0 5 3 1 0 0 3 1 2 0 0 5 4 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 3 0 1 0 5 1 2 0 3 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
41 62 81 43
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 61 37 107
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 51 97 70
ATP8 (size: 207 bases)
Amino acid sequence: MPQLDTSTWLITILSMIITLFVMFQTKTSMHSFFTNPQQSHLKMMKQKTPWEKKWTKIYSPLLSHQQY*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 7 (10.29%)
Threonine (Thr, T)
n = 9 (13.24%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.47%)
Leucine (Leu, L)
n = 7 (10.29%)
Isoleucine (Ile, I)
n = 5 (7.35%)
Methionine (Met, M)
n = 6 (8.82%)
Proline (Pro, P)
n = 4 (5.88%)
Phenylalanine (Phe, F)
n = 4 (5.88%)
Tyrosine (Tyr, Y)
n = 2 (2.94%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 1 (1.47%)
Glutamic acid (Glu, E)
n = 1 (1.47%)
Asparagine (Asn, N)
n = 1 (1.47%)
Glutamine (Gln, Q)
n = 7 (10.29%)
Histidine (His, H)
n = 3 (4.41%)
Lysine (Lys, K)
n = 7 (10.29%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 5 1 0 3 0 3 7 0 1 0 0 0 2 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 0 0 0 0 0 0 2 1 1 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 4 1 1 2 4 0 0 0 1 1 0 0 0 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 1 0 0 1 7 0 0 0 0 0 0 0 0 1 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 18 28 20
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 20 23 23
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 14 38 14
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 40 (7.78%)
Serine (Ser, S)
n = 30 (5.84%)
Threonine (Thr, T)
n = 39 (7.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 36 (7.0%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 39 (7.59%)
Methionine (Met, M)
n = 33 (6.42%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 44 (8.56%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 14 (2.72%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 19 (3.7%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
24 15 27 5 4 17 5 24 6 0 8 8 20 0 21 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 0 14 13 12 1 4 5 30 8 15 4 8 1 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 26 1 6 6 15 0 1 2 9 10 1 4 8 8 10
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 9 1 5 9 9 0 0 0 7 1 0 0 1 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
147 92 139 137
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 134 94 211
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
29 121 227 138
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 19 (8.37%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 16 (7.05%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 5 12 5 1 9 0 16 6 0 5 4 3 1 2 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 2 1 4 3 2 0 2 2 3 2 5 1 8 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 10 0 2 3 9 0 3 1 4 6 0 1 2 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 13 1 5 5 5 0 2 0 4 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
55 48 68 57
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
27 56 60 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 49 106 64
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 23 (8.85%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 13 (5.0%)
Tryptophan (Trp, W)
n = 11 (4.23%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 6 (2.31%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 5 8 9 2 10 0 11 8 0 4 1 10 0 6 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 1 6 8 0 2 5 9 4 5 2 2 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 10 0 8 1 10 0 0 4 5 8 0 0 2 5 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 1 1 2 3 0 1 1 4 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 60 63 77
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 67 57 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 80 111 62
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.6%)
Alanine (Ala, A)
n = 22 (5.8%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 15 (3.96%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 39 (10.29%)
Methionine (Met, M)
n = 17 (4.49%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 31 15 10 5 25 1 18 6 0 3 4 8 0 8 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 6 6 9 1 6 1 14 4 7 6 10 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 16 0 1 5 14 1 1 2 6 8 1 0 6 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 6 0 3 7 10 0 1 2 5 0 1 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
78 91 114 97
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 92 77 159
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 131 168 71
ND1 (size: 958 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.46%)
Alanine (Ala, A)
n = 27 (8.49%)
Serine (Ser, S)
n = 26 (8.18%)
Threonine (Thr, T)
n = 22 (6.92%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 8 (2.52%)
Leucine (Leu, L)
n = 56 (17.61%)
Isoleucine (Ile, I)
n = 29 (9.12%)
Methionine (Met, M)
n = 24 (7.55%)
Proline (Pro, P)
n = 22 (6.92%)
Phenylalanine (Phe, F)
n = 19 (5.97%)
Tyrosine (Tyr, Y)
n = 10 (3.14%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 10 (3.14%)
Asparagine (Asn, N)
n = 15 (4.72%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 5 (1.57%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 7 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 17 22 7 3 27 1 16 6 0 2 2 3 1 7 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 7 12 8 0 4 3 3 1 6 6 10 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 9 0 5 5 14 0 0 2 6 4 0 2 4 11 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 7 3 0 3 8 0 0 2 5 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
59 78 100 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 95 57 136
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 94 147 68
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 14 (4.05%)
Serine (Ser, S)
n = 35 (10.12%)
Threonine (Thr, T)
n = 42 (12.14%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 62 (17.92%)
Isoleucine (Ile, I)
n = 41 (11.85%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (0.87%)
Asparagine (Asn, N)
n = 19 (5.49%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 24 27 4 10 27 2 18 10 0 0 2 4 1 4 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 3 4 7 0 2 3 7 2 4 8 6 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 23 0 7 8 13 1 0 6 3 7 0 1 6 13 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 0 0 0 12 0 0 0 2 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
38 80 149 80
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 103 60 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 112 169 56
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 14 (4.05%)
Serine (Ser, S)
n = 35 (10.12%)
Threonine (Thr, T)
n = 42 (12.14%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 62 (17.92%)
Isoleucine (Ile, I)
n = 41 (11.85%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 18 (5.2%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (0.87%)
Asparagine (Asn, N)
n = 19 (5.49%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 24 27 4 10 27 2 18 10 0 0 2 4 1 4 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 3 4 7 0 2 3 7 2 4 8 6 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 23 0 7 8 13 1 0 6 3 7 0 1 6 13 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 0 0 0 12 0 0 0 2 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
38 80 149 80
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 103 60 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 112 169 56
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 21 (4.59%)
Serine (Ser, S)
n = 39 (8.52%)
Threonine (Thr, T)
n = 43 (9.39%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 94 (20.52%)
Isoleucine (Ile, I)
n = 48 (10.48%)
Methionine (Met, M)
n = 31 (6.77%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 15 (3.28%)
Tyrosine (Tyr, Y)
n = 18 (3.93%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 26 (5.68%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
23 25 27 15 9 32 5 32 10 0 2 3 5 0 6 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 2 2 8 2 11 0 2 4 7 5 6 9 8 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 27 0 5 11 11 2 2 8 5 13 1 1 11 15 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 10 0 1 3 11 0 0 2 8 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
63 115 169 112
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 116 90 198
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 135 211 95
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 16 (16.33%)
Isoleucine (Ile, I)
n = 14 (14.29%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 7 6 0 2 6 0 8 2 0 0 0 4 1 3 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 3 2 3 2 0 2 2 0 1 0 1 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 3 0 1 6 2 0 0 0 3 1 0 0 2 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
20 14 34 31
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 22 17 51
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 32 37 24
ND5 (size: 1812 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.64%)
Alanine (Ala, A)
n = 36 (5.97%)
Serine (Ser, S)
n = 57 (9.45%)
Threonine (Thr, T)
n = 55 (9.12%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 14 (2.32%)
Leucine (Leu, L)
n = 89 (14.76%)
Isoleucine (Ile, I)
n = 62 (10.28%)
Methionine (Met, M)
n = 35 (5.8%)
Proline (Pro, P)
n = 26 (4.31%)
Phenylalanine (Phe, F)
n = 45 (7.46%)
Tyrosine (Tyr, Y)
n = 20 (3.32%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 13 (2.16%)
Glutamic acid (Glu, E)
n = 10 (1.66%)
Asparagine (Asn, N)
n = 35 (5.8%)
Glutamine (Gln, Q)
n = 20 (3.32%)
Histidine (His, H)
n = 12 (1.99%)
Lysine (Lys, K)
n = 21 (3.48%)
Arginine (Arg, R)
n = 8 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
26 36 30 8 16 44 3 16 20 0 3 4 7 0 18 27
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 4 6 12 18 0 3 15 9 1 10 9 6 1 14
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 25 2 15 17 14 1 1 9 8 12 2 2 15 20 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 8 2 3 10 20 1 1 1 6 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
101 137 218 148
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
63 164 132 245
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 215 234 135
ND6 (size: 534 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (13.56%)
Alanine (Ala, A)
n = 12 (6.78%)
Serine (Ser, S)
n = 13 (7.34%)
Threonine (Thr, T)
n = 5 (2.82%)
Cysteine (Cys, C)
n = 3 (1.69%)
Valine (Val, V)
n = 19 (10.73%)
Leucine (Leu, L)
n = 19 (10.73%)
Isoleucine (Ile, I)
n = 18 (10.17%)
Methionine (Met, M)
n = 8 (4.52%)
Proline (Pro, P)
n = 3 (1.69%)
Phenylalanine (Phe, F)
n = 13 (7.34%)
Tyrosine (Tyr, Y)
n = 11 (6.21%)
Tryptophan (Trp, W)
n = 7 (3.95%)
Aspartic acid (Asp, D)
n = 3 (1.69%)
Glutamic acid (Glu, E)
n = 9 (5.08%)
Asparagine (Asn, N)
n = 5 (2.82%)
Glutamine (Gln, Q)
n = 1 (0.56%)
Histidine (His, H)
n = 1 (0.56%)
Lysine (Lys, K)
n = 1 (0.56%)
Arginine (Arg, R)
n = 2 (1.13%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 1 4 2 0 1 1 7 1 0 11 0 4 4 12 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 3 0 8 0 2 2 10 1 3 10 3 0 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 3 0 3 0 2 1 6 1 11 0 1 8 5 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 8 3 0 1 0 1 1 0 0 0 0 1 0 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
67 11 44 56
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 26 32 77
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
39 5 36 98
Total protein-coding genes (size: 11408 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 215 (5.66%)
Alanine (Ala, A)
n = 228 (6.0%)
Serine (Ser, S)
n = 296 (7.79%)
Threonine (Thr, T)
n = 319 (8.39%)
Cysteine (Cys, C)
n = 26 (0.68%)
Valine (Val, V)
n = 152 (4.0%)
Leucine (Leu, L)
n = 594 (15.63%)
Isoleucine (Ile, I)
n = 367 (9.66%)
Methionine (Met, M)
n = 238 (6.26%)
Proline (Pro, P)
n = 194 (5.11%)
Phenylalanine (Phe, F)
n = 235 (6.18%)
Tyrosine (Tyr, Y)
n = 138 (3.63%)
Tryptophan (Trp, W)
n = 108 (2.84%)
Aspartic acid (Asp, D)
n = 64 (1.68%)
Glutamic acid (Glu, E)
n = 90 (2.37%)
Asparagine (Asn, N)
n = 170 (4.47%)
Glutamine (Gln, Q)
n = 92 (2.42%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 97 (2.55%)
Arginine (Arg, R)
n = 64 (1.68%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
183 184 200 80 59 223 21 192 91 1 42 30 72 8 96 139
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
38 11 15 67 69 88 4 38 45 90 42 73 51 67 3 67
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
79 169 4 59 69 110 6 14 38 65 73 7 19 69 101 30
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
71 74 16 22 42 94 3 8 9 45 2 1 0 6 1 101
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
749 834 1244 969
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
466 985 759 1586
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
175 1074 1623 924

>NC_020661.1 Octodon degus voucher 109241 mitochondrion, complete genome
GTTAATGTAGCTTATCTTTCAAAGCAAGGCACTGAAAATGCCTAGATGAGTATTTTTACTCCATAAACAT
AAAGGTTTGGTCCTAGCCTTTTTATTAGTTGTCAATAAAATTATACATGCAAGAGTCATCAAACCTGTGA
GAATGCCCTCCAAGTCGCATCGTGACCTAGAGGAGCTGGTATCAAGCACACTACCGTAGCTCATGACACC
CCGCTTAGCCACACCCCCACGGGATACAGCAGTAATTAAAATTAAGCAATAAACGAAAGTTTGACTAAGT
TATATAACAACTAAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCTAATTAATAA
ACCCCGGCGTAAAGAGTGTTAAAGACAAAACTAAAATAAGATTAAAGTTTACCCAAGTCGTAAAAAACTA
CAGGTAAAAAATAAATCCACATACGAAAGTTATCTTAGTACACCTGAATCCACTAAAGCTAAGATCCAAA
CTGGGATTAGATACCCCACTATGCTTAGCCATAAACACAGACATTTAACAACAAAAATGTTCGCCAGAGA
ACTACTAGCAACAGCTTAAAACTCAAAGGACTTGGCGGTGCTTTAAACCCACCTAGAGGAGCCTGTTCTA
TAATCGATAAACCCCGATAAACCTCACCACTTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAA
CCCTAATAAGGAAAAAAAGTAAGCACAAATATACTCATAAAAACGTTAGGTCAAGGTGTAGCTAATGAAG
TGGTAAGAAATGGGCTACATTTTCTTACCTTAAGAATATTAACAGTAATCTTTATGAAATCTAAAGATTT
AAGGGGGATTTAGCAGTAAATTAAGAATAGAGAGCTTAATTGAATTCGGCCATGAAGCACGCACACACCG
CCCGTCACCCTCCTTAAATACTCACTCAAATTTTTTTTCCTTTTAATTACAACCAATATGAGAGGAGACA
AGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGACAAACAAAGTGTAGCTTAAACAAAAGCATCC
GGCCTACACCCGGAAGATTTCAAACACTATGACCACTTTGAACTAAATCTAGCCCGACAACCTACTATAC
ATTTCATGTATTACTAATACTATAAAAACCTAAAATAAAACATTCACAAATTTAAAGTATAGGAGATAGA
AATCTATAAAGGCGCTATAGAGATAGTACCGCAAGGGAAAGATGAAAGAAGAACAAATTAATAGTACAAC
ACAGCATAGACTACACCTACTACCTTTTGCATAATGAGTTAACTAGTAAAATTTGGCAAAAAGAATTTTA
GTCAACTACCCCGAAACCAAACGAGCTACTTCCGAACAGCTGTAAGAGCAAACTCGTCTATGTGGCAAAA
TAGTGAGATGATTTAGAAGTAGAGGTGAAAAGCCTATCGAGCTTGGAGATAGCTGGTTATCCAAATAAGA
ATTTTAGTTCAACTTTAAGTTTTCCTGAAAAATTTATAATTTTACTGAAAGCTCAAATGTTAATTTAAGG
AGGGACAGCTCCTTAAGCAAGGATACATCCTTAAACAGAGAATAAACAATACATCTACCATAGTAGGCTT
AAAAGCAGCCATCAATTAAGAAAGCGTTCAAGCTCAACAAAACATCAACAACTTATCCCAAAAAACAATA
ATCACTTCCTGTTTGACAATTGGATTAATCTATTATTAAATAGAAGAAATAATGTTAATATTAGTAACAA
GAAATAATTCTCCTTGCACAAGCTTAGATAAACTCACCCAAATTAACAACCATATAATAAATACATTAAC
TAGATAATTATATTATATATATTGTTAACCCGACGCAGGTGTGCAAAAAGGAAAGACTAAAACAAGCAAA
AGGAACTCGGCAAACACAAATCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCCCAAGTATTAGAGG
CACCGCCTGCCCAGTGACTTTTACAGTTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCA
CTTGTTCTTTAAATAAGGACTAGTATGAACGGCTTGACGAGGATTTAACTGTCTCTTGCTTATAGTCTGT
GAAATTGACCTTCTCGTGAAGAGGCGAGAATAAAAAAATAAGACGAGAAGACCCTATGGAGCTTAAATTT
ATTAACCCATTATTAACTGACTAAATCTAATAGAGATAAAATATAGACCATGGGTTAACAATTTTGGTTG
GGGTGACCTCGGAGTAAAACCTAACCTCCGAATGATTTTAACCTAGACCCTACAAGTCAAAGTTTCTATT
CATACATTGACCCAGAATTCATCTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCTATTC
AAGAGTTCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACCCCCAAATGGTGCAACCGCT
ATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCG
GTTTCTATCTATTAAAAATTTCTCCCAGTACGAAAGGACAAGAGAAATAAGGCCAATAAAACAGCCACGC
CTTAATAGCAAAAGAATGATATTATATTAACTCACTAGCTATTAATTAAAACTACCCAAGAGCATGGGTT
TGTTAAGGTGGCAGAGCCCGGTAATTGCATAAAACTTAAAACTTTACAATCAGAGGTTCAACTCCTCTCC
TTAACATTCATGTATATAATCAATTTCCTATTATTAATTGTCCCAATTCTTCTTGCTATAGCTTTCTTAA
CCTTAATAGAGCGAAAAATGCTAGGCTACATACAACTACGCAAAGGACCAAACATTGTAGGCCCTTATGG
CATTCTACAACCAATAGCAGACGCACTAAAATTATTTATCAAAGAACCCTTACACCCCTCAACATCATCT
ATCCTACTATTCACCATCGCACCTTCCCTAGCCCTAACATTAGCACTATCTATATGAATCCCTATACCCA
TACCCCACCCCCTCATTAACATAAACCTAGGAGCCCTATTCATCCTAGCTACATCAAGCCTTGCCGTGTA
TTCTATTTTATGATCCGGATGAGCCTCAAACTCCAAATATGCCTTATTCGGGGCACTACGAGCCGTTGCC
CAAACCATCTCATACGAAGTAACCTTAGCCATTATCCTCCTATCAATCCTAATCCTAAACGGTTCATTCA
CACTTTCAACTTTAATAACCACCCAAAAAAACATCTGACTGATCCTACCAACTTGACCTTTAGCCATAAT
ATGATTCGTTTCTACCCTTGCAGAGACTAACCGAGCTCCATTTGACCTAACCGAAGGTGAATCAGAGTTG
GTCTCAGGTTTTAATGTAGAATATGCCGCAGGTCCATTTGCACTATTCTTCATAGCTGAATACATAAACA
TTCTCATAATAAATGCTCTAACAACAATTATCTTCCTTAACTCTCTACCAACTTCCTCAAACCCAGAAAT
TCACTCAACAAATTTTATAATCAAAACACTAATCCTAACAGCCTTATTCTTATGAATCCGAGCCTCCTAT
CCACGATTCCGCTACGACCAACTAATACATCTTTTATGAAAAAACTTTCTACCATTGACTCTAGCTTTAT
GTATATGACATATTTCAATACCTATTTTTATATGCAGCATCCCCCCTCAATCAATATAGAAATATGTCTG
AAAAAGAGTTACTTTGATAGAGTAAAGCATAGAGGTTTAAGCCCTCTTATTTCTAGAAAAATAGGATTCG
AACCTAACCTGAAGAACTCAAAATTCTCCGTGCTACCACTACACTAATCTCTACTAGTAAGGTCAGCTAA
ATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTCTAATCCCTTCCCGTACTAATAAAAATCATACTAA
TAACCATTATCTACACCACATTAATCATAGGAACACTAATCACCCTTATCAGCTCTCACTGACTATTAAT
ATGAATCGGCCTAGAAATAAGCATATTAGCTATTATCCCTATCCTAATAAACAAATCTAACCCTCGGTCA
ACACAACCTGCAACAAAATATTCCCTCATGCAACCAACCGCATCAATAATCCTCTTACTATCCATTATCT
TAACTATAATGTACTCAGGCCAATGATCTATCTTTTACTCCAACAACACAACCATTTCATTAATTTTAAC
CACATCATTAATCATAAAACTAGGCTTAGCCCCCTTTCACTTCTGAGTAACAGAAGTAACACAAGGAACA
TCCCTACTCACAGGGATAGTGTTACTCACATGACAAAAAATTGCACCCCTCTCTATTCTACTTCAAAATT
TCCCAACAATCAATCAACCCTTAATCCTCGCTTCAGCTGTCCTGTCGACACTGTTAGGAGGATGAGGGGG
TCTTAACCAAACACAATTACGAAAAATCTTGGCATATTCATCAATCGCCCATATAGGATGAATAATAGCA
GTCCTATTCTACAACCCATCAATTTCAATCTTAAACCTAGTAATCTACATTATACTAACCATCTCAACAT
TCTCCATCCTCCACACTAACAACAACCTAACTACACTAGCACTATCCCACATATGAAGCACCTCTCCCCC
AACCATTATTATCATCTTAATAAACCTATTATCCCTAGGAGGTTTACCACCCCTAACTGGATTTGCCCCT
AAATGAATTACAATTCAAGAAATAGTAAAAAATAATAACATCACAATTTCCATTATTATAACAATAATAG
CCCTACTTAGCCTATACTTCTATATACGACTAACATACTCAACAACCCTAACCCTATTCCCATCTACCAA
TAGCTCAAAATTTAAATGATTCTTCCACAATAACAAAAAAATAATTATACTAGCACCCCTCATCACTTTA
TCTACCATACTCCTCCCCATAACACCCCTACTAACAACCCTAAGCTAAGGAGATTAGGTTAACAAGACCA
AGAGCCTTCAGAGCCGTAAGTAAATATATCAGTATTTATTTCTTGATAAGAGGTGCAAGACTGTAAACTC
ACATCATCTAAATGCAAATCAGACACTTTAATTAAGGTAAGCCCTTTGTAGATTGATGGGATCCTAACCC
ATGAAAATTTAGTTAACAGGTAAATACCCTAATCAACTGGCTTCAACCTACTCTCCCGCCCTGTAAAGAA
AGAGGAGGGCGGGAGAAGCCCCGGCAGGTTTGAAGCTGCTCCTTTGAATTTGCAATTCAATATGATTAAT
CACCTCAGAGCTGTGGCAAAAAAAGGAGTATAACCTTTATCTTTAGATTTACAGTCTAATGCTTAAATTC
AGCCATTTTACCTCTTACTACTTATGTTTATTAATCGGTGATTATTTTCTACAAATCACAAAGACATCGG
TACTTTATATCTTCTATTCGGCGCTTGAGCCGGAATAGTAGGCACGGCTTTGAGTTTACTAATTCGAGCA
GAATTAGGCCAACCTGGAGCCCTGCTAGGAGATGACCAAATCTACAATGTAGTCGTAACAGCCCATGCAT
TTGTTATAATCTTTTTTATAGTTATACCTATTATGATTGGAGGATTCGGAAACTGGTTGGTTCCTTTAAT
AATTGGAGCGCCTGATATAGCATTCCCCCGAATAAACAATATAAGCTTCTGACTTCTACCCCCATCTTTC
CTCTTACTTCTCGCTTCATCAATAGTAGAAGCTGGGGCCGGAACAGGATGAACAGTATACCCACCATTAG
CTGGAAACCTTGCCCATGCAGGAGCCTCCGTTGATTTAACAATTTTCTCTCTGCACCTAGCAGGGGTTTC
ATCAATTCTAGGAGCTATTAATTTTATTACTACTATTATTAATATAAAACCACCAGCTATGACACAATAT
CAAACACCCCTGTTCGTCTGATCAGTATTAATCACAGCCGTATTACTCCTACTCTCATTACCTGTTCTGG
CAGCTGGGATCACAATATTACTAACAGACCGAAACTTAAATACCACTTTCTTTGATCCTGCAGGGGGAGG
AGACCCTATCTTGTATCAACACTTGTTCTGATTTTTTGGGCACCCTGAAGTATACATCTTAATCTTACCT
GGGTTTGGAATAATTTCACATATTGTAACATATTATTCAGGTAAAAAAGAGCCTTTTGGTTATATAGGAA
TAGTATGAGCTATAATGTCAATCGGATTTCTAGGATTTATTGTATGAGCCCATCATATGTTTACCGTAGG
AATAGACGTCGACACACGAGCATACTTTACATCAGCTACTATAATCATTGCCATCCCTACAGGAGTAAAA
GTATTTAGCTGATTAGCCACCCTGCATGGAGGAAACATTAAATGATCCCCTGCAATATTATGAGCATTAG
GGTTCATTTTTTTATTCACAGTAGGGGGATTAACAGGAATCGTACTAGCCAATTCCTCACTAGACATTGT
CCTACATGATACATACTATGTCGTCGCACATTTCCACTATGTATTATCCATAGGAGCCGTATTTGCTATT
ATAGGAGGCTTCGTCCACTGATTCCCCTTATTCACAGGATACACCTTACATTCCACATGAGCTAAAATTC
ACTTTTTCATTATATTCACAGGAGTAAACATTACTTTCTTCCCTCAACACTTCCTAGGTTTATCAGGAAT
ACCACGACGATACTCTGACTACCCGGACGCCTACACATTCTGAAACACAGTTTCATCCATAGGCTCATTT
ATCTCTCTAATGGCTGTTATAATCATAATTTTCATAGTCTGAGAAGCATTCGCTTCTAAACGAGAAGTAA
TAACAACCGAACTAACTTCAATTAACCTAGAATGACTTCACGGATGTCCTCCTCCATATCATACATTTGA
AGAACCAACATACATCAAAACACTATAACAAGAAAGGAAGGAATTGAACCCCCTAAGACTAGTTTCAAGC
CAGCCCCATAACCTTTATGACTCTCTTCACAAGAATTAGATATTAGTAAAACTATTACATAACTTTGTCA
AAGTTAAATTACTGGTTAGACTCCTGTATATCTTTATGGCTTACCCCTACCAATTAGGCTTCCAAGATGC
TACTTCCCCAATTATGGAAGAATTACTTCACTTCCACGACCACACACTAATAATCGTTTTCCTAATTAGT
ACATTAGTGCTTTATCTCATTTCACTTATATTGACTACAAAACTAACTCATACAAGCACTATAGACGCCC
AAGAAGTCGAAACTATTTGAACTATTTTACCAGCTATTATCTTAATTATAATTGCTCTACCATCACTACG
AATTTTATACATAATAGATGAAGTTAACAACCCTGCATTAACAGTAAAAACTATGGGGCACCAATGATAC
TGAAGTTACGAGTATACTGATTATGAAGAATTAAATTTTGACTCATATATAACCCCTACAACAGACCTAA
AACCAGGAGAACTTCGACTACTTGAAGTCGATAACCGAGTTGTATTACCAATAGGGATACCTGTTCGTAT
ATTAATTTCATCAGAAGACGTACTACACTCATGAGCCGTTCCATCCTTAGGATTAAAAACAGATGCCATT
CCAGGACGACTAAATCAAGCAATTTTAACATCATCCCGTCCAGGTTTATTCTACGGTCAATGTTCAGAAA
TCTGTGGCTCTAACCACAGTTTCATGCCTATCGTCATCGAAATAGTCCCTTTAAAAACATTTGAAAACTG
ATGCTCTTCAATATTATAAGACATTATGAAGCTAACCAGCATTAACCTTTTAAGTTAAAGACTGAGAATT
CTTATTCTCCATAATGAAATGCCACAACTAGACACATCCACATGACTAATTACTATTCTATCAATAATTA
TCACATTATTTGTTATATTCCAAACTAAAACCTCAATACACTCATTCTTTACTAACCCCCAACAATCCCA
CTTAAAAATAATAAAACAAAAAACACCTTGAGAAAAAAAATGAACGAAAATCTATTCTCCTCTTTTATCA
CACCAACAATACTAGGCATGCCTATTGCAATTATCATTATCATATTCCCCGCTATACTATACCCCAACCC
AAAGCGATTAATTAATAACCGAGTAGTTGCCCTTCAGCAATGATTAATTAAACTAATTCTAAAACAAATA
ATATTAATTCACTCTACCAAAGGACGAACTTGATCTTTAATATTAATCTCACTAATCTTATTTATTGGGA
CAACCAATTTATTAGGGCTATTACCACACTCCTTCACCCCTACTACTCAACTATCTATAAACTTAGGTAT
AGCAATCCCTCTTTGAGCAGGGGCTGTAATCCTGGGCTTCCGTCATAAAACAAAAATATCTTTAGCCCAC
TTCCTTCCCCAAGGCACACCTATTCTCCTTATCCCTATACTAATTGTAATCGAAACAATTAGCCTATTTA
TTCAACCAATAGCCTTAGCAGTCCGTCTGACTGCTAATATTACTGCTGGACATTTATTAATACATCTAAT
TGGAGGAGCAACCTCCGCACTACTTACAATTAGCCCTCCAGCAGCTTTAATAACATTCATTATTCTTCTC
CTCTTAACCATTCTTGAATTCGCCGTTGCACTAATTCAAGCCTATGTATTTACACTACTAGTTAGCCTTT
ACCTACATGATAATACTTAATGACCCACCAAACACATGCATACCACATAGTTAACCCGAGCCCTTGACCT
CTTACAGGGGCACTATCAGCCATTTTACTTACCTCAGGCTTAATTATATGATTCCACTTTAATTCAACAA
CCCTACTCTCACTAAGCATACTAACCAACCTTATAACTATATACCAATGATGACGAGATGTAGTACGAGA
AGGAACATACCAAGGCCACCACACCTCTATTGTACAAAAAGGTCTTCGTTATGGGATAATCCTTTTCATT
ATTTCAGAGGTATTTTTCTTCTCAGGATTCTTCTGAGCATTTTATCACTCCAGCTTAGCACCTACTCCAG
AATTAGGGGGATACTGACCCCCTACAGGCATTAACCCTTTAAACCCCTTAGAAGTTCCACTATTAAATAC
ATCAGTATTACTTGCCTCTGGAGTATCAATCACTTGAGCCCACCATAGCTTAATAGAAGGAAACCGAAAA
CAAATAACCCAAGCCCTTGCAATTACCATTATCCTAGGGGCCTATTTCACCCTACTTCAAGTATCTGAAT
ACTTCGAAGCATCTTTCACCATCTCTGACGGTATTTACGGCTCTACATTTTTCGTTGCAACAGGATTTCA
TGGATTACACGTAATCATTGGATCAACATTCCTAATGACATGCTTACTACGCCAACTCTACTTCCACTTT
ACCTCTAAACACCATTTCGGATTCGAAGCCGCAGCTTGATACTGACACTTCGTAGACGTTGTATGACTAT
TCCTTTATGTCTCTATTTATCGATGAGGCTCATGCTTTCTTATATAATTAGTACTGCTGACTTCCAATCA
CCAAGTTCCGTTAATATAATGGAAGAAAGCAATAAACATCGTCATATCACTCATCACCAACTATACATTA
ACCATAATCCTTATCACAATTGCATTCTGACTCCCTCAACTTAATATTTATACTGAAAAAGCCAACCCTT
ATGAATTTTGATTCAATCCTCCANAAANNNNNNNNNTCCCATTCTCCATAAAATTCTTCCTAATCGCCAT
CACCTTTTTACTGTTTGACCTAGGAAATGCTCTTCTACTTCCTCTCCCATGAGCCCTTCAAACTCTAACC
CTTAACTTAACAACATGACCCGCTATTTGCTTAATTTTAATCCTATCCCTAGGCCTCACTTACGAATGGT
TACAAAAAGGGTTAAAGTGAGCTGAATATGGTAATTAGTTTAACAAAAACAAATGATTTCGACTCATTAG
ATTATGCCAACTACATAATTACCAAAATGACTTCAATCTTATTTAACATTATTACAGCCTTTATCATTTC
TTTTATGGGCATTATAATCTATCGATCCCATATAATGTCCTCCTTACTATGCCTAGAAGGGATAATGTTA
TCCATATTCATTTTAGGCGTAACTATCATACTAAACTCCCATTATATTTTAGCTTTCTCCACACCCATCA
TCCTCTTAGTATTCGCCGCCTGCGAAGCAGCTGTGGGTCTCGCACTATTAGTAATAATCTCAAATACATA
TGGTATTGACTACGTACAAAACTTAAATCTACTACAATGCTAAAAATCATCATACCAACAATCATACTCA
TCCCAACCGTCTGATTATCTAATACCTCCTCAATATGAATTAACACAACATCATACAGCATACTAATTGC
ACTGATCAGTCTAAGCTACCTCAACAATATAGATACAACCAACATAAACCACTCACTGACATTATCATCT
GACCCCTTATCAACCCCTTTATTAATCTTAACAACATGACTTCTACCCTTAATAATCATTGCTAGCCAAC
ACCACCTAAAAAATGAAACAGAAACACGAAAAAAAACTTACATCTCCTTACTAATCTCCTTACAAACATT
CCTTATCCTAACATTCTCAGCAACAGAAATAATTATATTTTACATTTTATTCGAAACAACCCTAATCCCT
ACATTAATTATCATTACACGCTGAGGGAATCAAACAGAACGAATAAACGCTGGCCTATACTTCCTATTTT
ACACCTTAATTGGATCCCTCCCCTTACTAATCACATTAATCTACATTCAAAACCAAATAGGAACCTTAAA
CTTCCTATTATTTAATTATTATAAACCAATGCTTGACTCCACTTGATCCAACAACCTCATATGACTAGCA
TGCACTATAGCATTTATAATTAAACTACCCTTATACGGCCTCCACTTGTGATTACCAAAAGCACACGTCG
AAGCTCCAATTGCAGGCTCCATGGTACTTGCAGCCATCTTACTTAAATTAGGGGGGTACGGTCTAATACG
AATTCTACAACTCCTAGAACCCTTAACAAATAATATAGCATACCCATTCCTTCTACTGTCGTTATGAGGA
ATAATTATAACTAGCTCAATCTGCTTACGCCAAACAGACTTAAAATCCCTCATCGCATACTCCTCTGTTA
GTCACATAGCACTTGTAATCGTTGCTATTTGAATTCAACCCCCTTGAAGCTTAATGGGAGCTACTTCTTT
AATAATTGCCCACGGTCTTACATCCTCCCTATTATTCTGTGTAGCTAATTCTAATTATGAACGAGTACAC
AGCCGAACTTTACTTCTAACACGAGGCCTACAAATACTATTTCCACTTATAGGGATATGATGGATTATTG
CAAGCCTGACAAACCTTGCTTTACCCCCTTCAATTAACCTATTCGGAGAACTATTAATCGTAATATCAAC
TTTCTCGTGATGTAATCTCACAATCATTCTTACCGGATTAAACATCCTTATCACAGCTTTATACTCACTT
TATATACTAATCTCAACACAACGAGGGAAACTACCCTACCACATTCACAACATACCCCCAACATTTACAC
GAGAAAATATTCTAATAAGCCTACACATTATCCCTCTACTGCTCCTAACCCTTAACCCTAAAATCGTCCT
AGGAAACCTATATTGTAATTATAGTTTAACCAAAACATTAGATTGTGAATCTAATAATAGAAGTATTAAA
ACCTTCTTATTTACCCCTATTCGGAGAAAGACCGCTGGAACTGCTAACTCCACACCCCATAATTAACATT
TATGGCTTTCTTGACTTTTATAGGATAGAAGTATTCCATTGGTCTTAGGAACCAAAAAATTGGTGCAACT
CCAAATAAAAGTAATAAACCTATTCAACTCTTCATTTATCATAACCTTAACAATCTTAACATTCCCTATC
ATCACACCTTTGACCAACCTATACAAAAAATCACACTACCCCGGCTATATTAAAACAATTATCTCCATCT
CCTTTTTCCTCAGCCTAATCCCAACCCTCACTATGTTTTACTCTGGTCAAGAGGCCACAATATATAATTG
GAGCTGACTAAATATTCAAACCTTTCACCTAAATATTAATATTAAATTAGACTATTTTTCTATCCTATTT
ATATCAGTAGCCTTATTTGTCACATGATCCATTATAGAGTTCTCACTCTGATACATACACTCTGACCCTA
ATATAGACAAATTCTTCAAATATCTACTACTATTTCTAATTACTATAATAATCCTAGTTACAGCTAACAA
CCTATTCCAACTTTTCATCGGCTGAGAAAGCGTAGGAATCATATCTTTCCTACTAATTGGATGGTGACAT
GGACGATCAGACGCCAACACAGCAGCAATGCAAGCAGTATTATACAACCGTATTGGCGACATCGGCTTCA
TTCTTTCCATAACATGATTTCTACTCTACTCCAACTCATGAGACCTACAACAAATCTTTATTACCCAAGA
AGGTACTGATATTATCCCTATGCTCGGCCTACTGCTAGCAGCAACTGGAAAATCAGCCCAATTCGGACTA
CACCCTTGACTCCCCTCAGCTATAGAAGGCCCTACACCGGTATCTGCCTTACTTCACTCAAGCACTATAG
TTGTCGCAGGAATTTTCCTATTAATCCGCTTCTATCCCCTCATACAAAATAATCAATCACTCCAAACACT
ATGCCTCTGCCTCGGAGCATTAACCACTTTGTTTACGGCCATTTGTGCACTGACACAAAATGACATCAAA
AAAATCGTAGCATTTTCCACTTCCAGCCAACTAGGCCTAATAATAGTAACCATCGGAATTAACCAACCCC
ATCTAGCATTTCTTCACATCTGCACCCACGCTTTCTTCAAAGCAATACTTTTTCTATGCTCCGGTTCAAT
CATCCATAATTTAAACGACGAACAAGATATTCGAAAAATAGGCGGCCTACACAAAACCCTACCAATTACA
TCTTCCTCTTTAATAATTGGCAGTATAGCTTTAACAGGGATCCCTTTCCTTACAGGATTTTACTCCAAAG
ACCTAATCATTGAATCTGCAACAACGTCGTATACAAACGCCTGAGCCCTAGTTATTACCCTAATTGCTAC
ATCCCTAACTGCTGTCTATAGCACACGAATCATCTTCTTCGCATTACTCAATAACCCTCGATTTAATTTC
TCTCCAAGCATAAATGAAAATGACCCCACAATAATTAACCCTATCAAACGACTAGCCATCAGCAGCATCT
TAGCCGGCTTCTTCATCTCCTACAATATTCCCATCACAAACATCCCTCAAATAACTATACCCCCCTACAT
GAAATTTGCAGCAATCTTATCAACAGTCCTAGGCTTCATAATCGCCCTCGAACTAAACGTAATAACCAAA
AACCTTAAATCTAATTACTCCACTAAATTAACTAACTTCTCAAACATGCTAGGCTACTTCCCACCCCTAA
TCCACCGAACATCCCCATTCATTAACCTCTCAACAGGCCAAAACCTAGCCTCCCTAATAATTGATTTAAT
TTGACTTGAAAAATCTCTACCAAAGACTATCTCTCAAACACAAGCAATAGCATCCATATATACTTCTACC
CAAACCGGCCTACTAAAACTCTACTTCCTCTCCTTCCTGATCTCTATAACTCTAGCACTCACCCTACTAT
TTTAATTACCGCGAGTGATCTCCAGAACAATAAAAATCCCTGCAAACAAAGATCAACCAGCTACAAATAT
CAATCAACAATTATAACTATAAATCGCAGCAACACCAGCAGAATCTTCATTTAAAAATCCTACGCTTCCC
CCCTCAGCATCATAAATAATCCACTCACCTATGCCATAACAATTAGCCAATACCTCAACATGCTCATAAT
CAACTCATCAACGTAAACCCACAAGCTCAAACAAGAAACCTAAAAACAATGTCCCTCAAATAATAACACT
TGACCCTCATGTCTCAGGATATTGCTCCATAGCTATCGCAGTTGTATAAGCAAACACCACCATTATACCC
CCTAAATATACTAAAAACACAACCAACCCTAGAAATGACCCACCATAACTCAAAATAATAGCACACCCAA
TTCCACCACTAACAACCAATGCTAACCCCCCATAAATAGGCGAAGGTTTAACAGAAAAACTAATAAAACC
AATAACAAACATAATACTAAGAATATAAACAATATTTAAAATCATTATCCTCACATGGAATTTAACCATG
ACCAATGATATGAAAAACCACCGTTGTAATTCAACTATAAGAATATACTAATGACCAATATCCGAAAATC
ACACCCCTTAATCAAAATTATCAACCACTCATTCATCGACTTACCAGCTCCCTCGAATATCTCAGCATGA
TGAAATTTCGGTTCCTTATTAGGTGTATGTTTAATATTACAAATTATTACAGGTCTATTCTTAGCAATAC
ACTACACAGCCGATACAACCACAGCATTCTCATCAGTCACTCACATTTGCCGAGACGTAAATTACGGATG
ATTAATCCGATATCTTCACGCTAACGGAGCGTCCATATTCTTCATCCTACTTTACCTACACATCGGACGA
GGTATCTACTACGGGTCATTTACTTTCATAGAAACCTGAAACATCGGAGTTCTACTTTTATTCGCAGTCA
TAGCTACAGCTTTCATAGGCTACGTTCTACCATGAGGACAAATATCTTTCTGGGGGGCAACAGTCATCAC
AAACCTTCTATCAGCAATCCCTTATATCGGACCTAATCTAGTAGAATGAATCTGAGGTGGATTTTCAGTC
GACAAAGCTACACTAACCCGATTTTTTGCTTTCCACTTCATCCTGCCTTTTATCATCACAGCAATAGTAA
TAATCCACTTATTATTCCTTCACGAAACAGGATCCAACAACCCATCAGGGCTAAACTCAGACTCAGATAA
AATCCCATTCCATCCTTATTATACAATCAAAGACATCCTAGGATTCTTATTCATACTACTCACACTAATA
ACCCTTGTTTTATTTACACCAGACCTTCTAGGAGATCCAGACAACTATACCCCTGCCAACCCCTTAAACA
CCCCTCCCCACATCAAACCAGAATGATACTTCCTATTCGCATATGCCATCCTACGTTCAATCCCTAACAA
ACTAGGAGGAGTATTAGCCCTAGTATTATCCATCCTAATCCTAATGCTATTCCCCATACTTCATCTATCC
AAACAACGCAGCATATCATTTCGCCCCTTAAGCCAATGCCTTTTATGAGCCCTAGTAGGAAATCTAATTA
TTCTCACATGAATTGGGGGTCAACCAGTAGAACACCCATTCATTACAATCGGACAACTAGCCTCAGCAAT
CTACTTTTTCATCATCCTAATCCTCATACCAACCACAAGTCTCATAGAAAACAAACTCCTTAAATGAAGA
GCCTTAGTAGTATAAAAATTACATTGGTCTTGTAAACCAAAAATGAGAAACTAATTCTCCTAAGACACCC
AATTCAAGAAAGAGACATAGGCCCCGCTATCAGTACCCAAAACTGAAGTTCTAATTAAACTATTTCTTGA
AAACACCCCTCATATAATAACAACTATGTACTTCGTGCATTAATGCATGTCCCCATTAATATAATGCTCT
AGTACATATAATGTATTAAAGTACATAGACCATGTTATGTTTAATCAACATATAAACCTTAGCCCCATGC
ATATAAGCCAGTACTAATTAACTAAGACGTACATAAGACATATATCCAAGATCCAAAGGCAAACCTAGAC
AACATGAGTATTGTCCTCCTAATTAATCTAATAATCTTACATAAGACATACATCTCCGTGATCAGACATT
GGTACATCAAATTAAATAATCCTTGACAATACGTCTATCACTTTCCATTAGGGGTATCTTAATAACCATC
CTCCGAGAAACCATCAACCCGCCAGGCAGGTGTCACCCTCCTCGCTCCGGGCCCATAAATCGTGGGGGTA
GCTATACTGAAACTTTAACAGACATCTGGTTCTTTCTTCAGGGCCATAGAATTAAGCTGGCTCATTCGTT
CCTCTTAAATAAGACATCTCGATGCTAGGAGGTCTACTGGCGAGAAACCAACAACACTATAATACAAGAC
ATTTGGTAACGATTTAATTTTAGGGATGCTGTGACTCAGCATAGCCGTCAAGGCATGGTCTCAATCAAAT
CAATTGTAGCTGGACTTACAAATCAGTTCCCTTAGCCCGCATAATAAAAATCAAGAGGTGCATACTTTTA
ATGCTAGAAGGACATAGAATAAATTTACACATACACACGTATACACACGTATACACACACGTATACACAC
GTATACACACACGTATACACACGTATACACACACGTATACACACGTATACACACGTATACACACACGTAT
ACGCACACGTATACACACACGTATACACACACGTATACGCACACGTATACGCACACGTATACACACACGT
ATACACACACGTATACGCACACGTATACACACACGTATACACACACGTATACGCACACGTATACACACAC
GTATACACACACGTATACGCACACGTATACACACACGTACGTACACACGCACGCATTGTTTTACCAAAAG
TATCTTTTAACAAACCCCCCTTACCCCCCGTAAAATTATATATATATTGCATGGGTAAATTACCCATGCA
CCGTATTTATTAGCCCTGCCAAACCCCAAAAACAGGAAAATAAATACAAAATAACTACAATTTTACGCCT
ACCCTACCCATATTCATAGGGTGTAATTATAATATTTATACCCTCATGTCAGTACAACATTACATTATTT
TCCCACCACCCTCATTCATAGAATGACCACACCTTAAACAAACCCGCCTTGCAAACCCTAAGCCTAAG


Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.