Stats for order Osmeriformes
Browsing families:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.1 - 50.6% | 49.4 - 59.9% | 4590 - 5218 | 2785 - 3257 | 3942 - 5915 | 3861 - 5479 | 1.0 - 38.0 |
| Median | 48.3% | 51.9% | 4963 | 3137 | 4584 | 4132 | 7.0 |
| Average ± stdev | 47.2 ± 3.7% | 52.8 ± 3.7% | 4931 ± 206 | 3089 ± 154 | 4623 ± 616 | 4397 ± 544 | 10.7 ± 12.6 |
| Coefficient of variation | 0.08 | 0.07 | 0.04 | 0.05 | 0.13 | 0.12 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | 0.69 | -0.56 | -0.83 | -0.31 | - |
| Pearson p-value (two tailed) |
2.56E-01 | 2.56E-01 | 1.28E-01 | 2.51E-01 | 4.29E-02 | 5.44E-01 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.4 - 51.9% | 48.1 - 60.6% | 2841 - 3834 | 1682 - 2128 | 2791 - 3785 | 2378 - 3172 | 1.0 - 38.0 |
| Median | 48.7% | 51.6% | 3620 | 2014 | 3328 | 2615 | 7.0 |
| Average ± stdev | 47.6 ± 4.2% | 52.4 ± 4.2% | 3507 ± 327 | 1931 ± 165 | 3257 ± 297 | 2726 ± 287 | 10.7 ± 12.6 |
| Coefficient of variation | 0.09 | 0.08 | 0.09 | 0.09 | 0.09 | 0.11 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | 0.74 | -0.03 | -0.86 | 0.00 | - |
| Pearson p-value (two tailed) |
2.58E-01 | 2.58E-01 | 9.57E-02 | 9.58E-01 | 3.00E-02 | 9.96E-01 | - |
| Stats for D-loop (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.0 - 45.8% | 54.2 - 62.0% | 189 - 310 | 146 - 195 | 252 - 300 | 254 - 307 | 1.0 - 38.0 |
| Median | 41.0% | 61.0% | 226 | 158 | 295 | 273 | 7.0 |
| Average ± stdev | 40.9 ± 3.0% | 59.1 ± 3.0% | 229 ± 39 | 159 ± 16 | 282 ± 17 | 276 ± 19 | 10.7 ± 12.6 |
| Coefficient of variation | 0.07 | 0.05 | 0.17 | 0.10 | 0.06 | 0.07 | 1.18 |
| Pearson correlation coefficient with log10MLS |
-0.01 | 0.01 | 0.23 | 0.18 | 0.61 | 0.52 | - |
| Pearson p-value (two tailed) |
9.78E-01 | 9.78E-01 | 6.61E-01 | 7.32E-01 | 1.99E-01 | 2.88E-01 | - |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.4 - 47.6% | 52.4 - 57.6% | 369 - 422 | 289 - 338 | 348 - 408 | 446 - 486 | 1.0 - 38.0 |
| Median | 47.2% | 53.1% | 403 | 331 | 370 | 452 | 7.0 |
| Average ± stdev | 46.3 ± 2.0% | 53.7 ± 2.0% | 398 ± 15 | 321 ± 17 | 373 ± 17 | 460 ± 15 | 10.7 ± 12.6 |
| Coefficient of variation | 0.04 | 0.04 | 0.04 | 0.06 | 0.05 | 0.03 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.63 | -0.63 | 0.89 | 0.18 | -0.91 | -0.11 | - |
| Pearson p-value (two tailed) |
1.77E-01 | 1.77E-01 | 1.76E-02 | 7.37E-01 | 1.20E-02 | 8.39E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.8 - 50.0% | 50.0 - 57.2% | 585 - 716 | 534 - 628 | 493 - 626 | 772 - 868 | 1.0 - 38.0 |
| Median | 49.2% | 51.3% | 679 | 619 | 566 | 803 | 7.0 |
| Average ± stdev | 48.1 ± 2.6% | 51.9 ± 2.6% | 672 ± 41 | 599 ± 33 | 564 ± 39 | 809 ± 33 | 10.7 ± 12.6 |
| Coefficient of variation | 0.05 | 0.05 | 0.06 | 0.06 | 0.07 | 0.04 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.65 | -0.65 | 0.78 | 0.31 | -0.88 | -0.13 | - |
| Pearson p-value (two tailed) |
1.62E-01 | 1.62E-01 | 6.66E-02 | 5.53E-01 | 2.11E-02 | 8.11E-01 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.5 - 51.8% | 48.2 - 62.5% | 168 - 247 | 88 - 107 | 179 - 232 | 141 - 195 | 1.0 - 38.0 |
| Median | 47.2% | 53.5% | 221 | 104 | 211 | 159 | 7.0 |
| Average ± stdev | 46.3 ± 4.8% | 53.7 ± 4.8% | 217 ± 24 | 99 ± 6 | 205 ± 17 | 161 ± 18 | 10.7 ± 12.6 |
| Coefficient of variation | 0.10 | 0.09 | 0.11 | 0.07 | 0.09 | 0.11 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.56 | -0.56 | 0.64 | 0.09 | -0.73 | -0.21 | - |
| Pearson p-value (two tailed) |
2.48E-01 | 2.48E-01 | 1.68E-01 | 8.72E-01 | 9.88E-02 | 6.89E-01 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 49.4% | 50.6 - 60.7% | 48 - 55 | 18 - 28 | 41 - 52 | 41 - 52 | 1.0 - 38.0 |
| Median | 46.4% | 54.2% | 55 | 25 | 47 | 45 | 7.0 |
| Average ± stdev | 45.4 ± 3.4% | 54.6 ± 3.4% | 53 ± 2 | 23 ± 3 | 46 ± 3 | 45 ± 4 | 10.7 ± 12.6 |
| Coefficient of variation | 0.07 | 0.06 | 0.05 | 0.15 | 0.07 | 0.09 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | 0.71 | 0.21 | -0.82 | 0.06 | - |
| Pearson p-value (two tailed) |
3.20E-01 | 3.20E-01 | 1.17E-01 | 6.96E-01 | 4.70E-02 | 9.16E-01 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.1 - 49.8% | 50.2 - 58.9% | 355 - 475 | 283 - 319 | 417 - 520 | 326 - 393 | 1.0 - 38.0 |
| Median | 49.3% | 53.1% | 446 | 301 | 477 | 352 | 7.0 |
| Average ± stdev | 47.2 ± 3.3% | 52.8 ± 3.3% | 430 ± 40 | 302 ± 12 | 466 ± 33 | 352 ± 21 | 10.7 ± 12.6 |
| Coefficient of variation | 0.07 | 0.06 | 0.09 | 0.04 | 0.07 | 0.06 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.71 | -0.71 | 0.73 | 0.32 | -0.76 | -0.34 | - |
| Pearson p-value (two tailed) |
1.17E-01 | 1.17E-01 | 9.84E-02 | 5.42E-01 | 8.27E-02 | 5.12E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.4 - 50.7% | 49.3 - 59.6% | 163 - 221 | 110 - 129 | 170 - 216 | 168 - 200 | 1.0 - 38.0 |
| Median | 46.5% | 53.7% | 199 | 122 | 186 | 188 | 7.0 |
| Average ± stdev | 46.1 ± 3.3% | 53.9 ± 3.3% | 197 ± 18 | 121 ± 6 | 187 ± 15 | 185 ± 10 | 10.7 ± 12.6 |
| Coefficient of variation | 0.07 | 0.06 | 0.09 | 0.05 | 0.08 | 0.06 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.40 | -0.40 | 0.60 | -0.40 | -0.76 | 0.31 | - |
| Pearson p-value (two tailed) |
4.37E-01 | 4.37E-01 | 2.11E-01 | 4.27E-01 | 8.16E-02 | 5.46E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.1 - 51.8% | 48.2 - 57.9% | 204 - 252 | 127 - 158 | 203 - 259 | 162 - 196 | 1.0 - 38.0 |
| Median | 50.1% | 50.4% | 249 | 146 | 222 | 178 | 7.0 |
| Average ± stdev | 48.9 ± 3.4% | 51.1 ± 3.4% | 241 ± 16 | 142 ± 9 | 223 ± 17 | 177 ± 13 | 10.7 ± 12.6 |
| Coefficient of variation | 0.07 | 0.07 | 0.07 | 0.07 | 0.08 | 0.07 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.56 | -0.56 | 0.76 | 0.08 | -0.86 | 0.06 | - |
| Pearson p-value (two tailed) |
2.43E-01 | 2.43E-01 | 7.97E-02 | 8.85E-01 | 2.69E-02 | 9.16E-01 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.4 - 50.6% | 49.4 - 61.6% | 259 - 394 | 173 - 209 | 288 - 395 | 225 - 305 | 1.0 - 38.0 |
| Median | 48.6% | 51.8% | 354 | 204 | 341 | 250 | 7.0 |
| Average ± stdev | 47.1 ± 4.4% | 52.9 ± 4.4% | 342 ± 41 | 194 ± 13 | 343 ± 31 | 259 ± 27 | 10.7 ± 12.6 |
| Coefficient of variation | 0.09 | 0.08 | 0.12 | 0.07 | 0.09 | 0.10 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.70 | -0.70 | 0.84 | -0.17 | -0.93 | -0.08 | - |
| Pearson p-value (two tailed) |
1.19E-01 | 1.19E-01 | 3.79E-02 | 7.47E-01 | 7.34E-03 | 8.75E-01 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.7 - 52.9% | 47.1 - 61.3% | 238 - 356 | 139 - 189 | 231 - 345 | 170 - 253 | 1.0 - 38.0 |
| Median | 51.0% | 49.6% | 314 | 181 | 289 | 199 | 7.0 |
| Average ± stdev | 49.0 ± 5.2% | 51.0 ± 5.2% | 308 ± 35 | 169 ± 19 | 289 ± 33 | 207 ± 29 | 10.7 ± 12.6 |
| Coefficient of variation | 0.11 | 0.10 | 0.12 | 0.11 | 0.12 | 0.14 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.68 | -0.68 | 0.86 | 0.03 | -0.95 | 0.01 | - |
| Pearson p-value (two tailed) |
1.38E-01 | 1.38E-01 | 2.72E-02 | 9.55E-01 | 3.66E-03 | 9.86E-01 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.2 - 54.0% | 46.0 - 60.8% | 281 - 379 | 130 - 191 | 222 - 346 | 186 - 311 | 1.0 - 38.0 |
| Median | 51.2% | 50.4% | 360 | 183 | 301 | 232 | 7.0 |
| Average ± stdev | 49.1 ± 5.1% | 50.9 ± 5.1% | 347 ± 33 | 167 ± 25 | 292 ± 37 | 242 ± 44 | 10.7 ± 12.6 |
| Coefficient of variation | 0.10 | 0.10 | 0.09 | 0.15 | 0.13 | 0.18 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.45 | -0.45 | 0.70 | -0.04 | -0.91 | 0.25 | - |
| Pearson p-value (two tailed) |
3.66E-01 | 3.66E-01 | 1.25E-01 | 9.37E-01 | 1.20E-02 | 6.37E-01 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.5 - 52.4% | 47.6 - 62.5% | 81 - 115 | 49 - 72 | 99 - 127 | 54 - 91 | 1.0 - 38.0 |
| Median | 51.3% | 51.9% | 111 | 64 | 112 | 63 | 7.0 |
| Average ± stdev | 47.9 ± 5.5% | 52.1 ± 5.5% | 105 ± 11 | 61 ± 8 | 112 ± 8 | 69 ± 14 | 10.7 ± 12.6 |
| Coefficient of variation | 0.11 | 0.11 | 0.11 | 0.15 | 0.08 | 0.20 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.41 | -0.41 | 0.74 | -0.16 | -0.84 | -0.00 | - |
| Pearson p-value (two tailed) |
4.18E-01 | 4.18E-01 | 9.37E-02 | 7.61E-01 | 3.51E-02 | 9.98E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.8 - 52.6% | 47.4 - 61.2% | 356 - 456 | 205 - 271 | 353 - 488 | 290 - 404 | 1.0 - 38.0 |
| Median | 47.7% | 52.4% | 432 | 237 | 413 | 326 | 7.0 |
| Average ± stdev | 47.1 ± 4.5% | 52.9 ± 4.5% | 422 ± 33 | 233 ± 21 | 402 ± 44 | 336 ± 39 | 10.7 ± 12.6 |
| Coefficient of variation | 0.10 | 0.09 | 0.08 | 0.09 | 0.11 | 0.12 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.46 | -0.46 | 0.70 | -0.22 | -0.74 | -0.13 | - |
| Pearson p-value (two tailed) |
3.63E-01 | 3.63E-01 | 1.24E-01 | 6.75E-01 | 9.57E-02 | 8.05E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.8 - 55.9% | 44.1 - 56.2% | 86 - 112 | 44 - 58 | 72 - 101 | 53 - 75 | 1.0 - 38.0 |
| Median | 51.9% | 49.5% | 101 | 54 | 85 | 60 | 7.0 |
| Average ± stdev | 51.1 ± 4.2% | 48.9 ± 4.2% | 99 ± 7 | 51 ± 4 | 84 ± 9 | 61 ± 7 | 10.7 ± 12.6 |
| Coefficient of variation | 0.08 | 0.09 | 0.08 | 0.09 | 0.11 | 0.12 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.30 | -0.30 | 0.32 | 0.22 | -0.75 | 0.46 | - |
| Pearson p-value (two tailed) |
5.57E-01 | 5.57E-01 | 5.36E-01 | 6.69E-01 | 8.31E-02 | 3.64E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.8 - 50.4% | 49.6 - 62.2% | 450 - 614 | 244 - 324 | 458 - 603 | 398 - 539 | 1.0 - 38.0 |
| Median | 47.4% | 53.0% | 587 | 298 | 535 | 443 | 7.0 |
| Average ± stdev | 46.1 ± 4.3% | 53.9 ± 4.3% | 563 ± 54 | 284 ± 28 | 531 ± 43 | 459 ± 50 | 10.7 ± 12.6 |
| Coefficient of variation | 0.09 | 0.08 | 0.10 | 0.10 | 0.08 | 0.11 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.52 | -0.52 | 0.73 | -0.06 | -0.83 | -0.02 | - |
| Pearson p-value (two tailed) |
2.87E-01 | 2.87E-01 | 1.01E-01 | 9.10E-01 | 3.97E-02 | 9.76E-01 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.6 - 58.2% | 41.8 - 59.4% | 154 - 202 | 58 - 102 | 62 - 108 | 153 - 202 | 1.0 - 38.0 |
| Median | 51.5% | 49.6% | 192 | 91 | 74 | 179 | 7.0 |
| Average ± stdev | 50.8 ± 5.9% | 49.2 ± 5.9% | 180 ± 16 | 84 ± 15 | 76 ± 16 | 180 ± 16 | 10.7 ± 12.6 |
| Coefficient of variation | 0.12 | 0.12 | 0.09 | 0.19 | 0.21 | 0.09 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.32 | -0.32 | 0.45 | 0.10 | -0.62 | 0.08 | - |
| Pearson p-value (two tailed) |
5.36E-01 | 5.36E-01 | 3.71E-01 | 8.52E-01 | 1.87E-01 | 8.85E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.0 - 51.6% | 48.4 - 55.0% | 221 - 267 | 203 - 236 | 184 - 216 | 256 - 303 | 1.0 - 38.0 |
| Median | 50.9% | 49.3% | 252 | 227 | 202 | 271 | 7.0 |
| Average ± stdev | 49.9 ± 2.5% | 50.1 ± 2.5% | 249 ± 13 | 225 ± 11 | 202 ± 10 | 273 ± 15 | 10.7 ± 12.6 |
| Coefficient of variation | 0.05 | 0.05 | 0.06 | 0.05 | 0.05 | 0.06 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.71 | -0.71 | 0.86 | 0.46 | -0.80 | -0.33 | - |
| Pearson p-value (two tailed) |
1.17E-01 | 1.17E-01 | 2.62E-02 | 3.54E-01 | 5.49E-02 | 5.17E-01 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.6 - 49.5% | 50.5 - 58.4% | 364 - 449 | 331 - 401 | 309 - 410 | 510 - 565 | 1.0 - 38.0 |
| Median | 47.9% | 52.4% | 427 | 385 | 365 | 532 | 7.0 |
| Average ± stdev | 47.0 ± 2.8% | 53.0 ± 2.8% | 423 ± 28 | 374 ± 23 | 362 ± 29 | 536 ± 19 | 10.7 ± 12.6 |
| Coefficient of variation | 0.06 | 0.05 | 0.07 | 0.06 | 0.08 | 0.04 | 1.18 |
| Pearson correlation coefficient with log10MLS |
0.61 | -0.61 | 0.73 | 0.22 | -0.89 | 0.05 | - |
| Pearson p-value (two tailed) |
1.97E-01 | 1.97E-01 | 9.85E-02 | 6.76E-01 | 1.71E-02 | 9.32E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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