Stats for family Osmeridae

Stats for total mtDNA (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 47.6 52.4 4795 3137 4584 4132 10.0
Plecoglossus altivelis 50.6 49.4 5120 3257 4304 3861 3.0
Osmerus mordax 48.6 51.4 4963 3111 4414 4132 7.0
Hypomesus olidus 48.3 51.7 4900 3215 4584 4087 5.0
Stats for total protein-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 48.1 51.9 3478 2014 3328 2592 10.0
Plecoglossus altivelis 51.9 48.1 3790 2128 3117 2378 3.0
Osmerus mordax 49.2 50.8 3620 1988 3185 2615 7.0
Hypomesus olidus 48.4 51.6 3482 2047 3339 2544 5.0
Stats for D-loop (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 39.0 61.0 209 152 295 269 10.0
Plecoglossus altivelis 41.0 59.0 204 147 252 254 3.0
Osmerus mordax 42.8 57.2 241 161 278 259 7.0
Hypomesus olidus 45.8 54.2 310 195 300 298 5.0
Stats for total tRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 47.2 52.8 403 331 368 452 10.0
Plecoglossus altivelis 47.6 52.4 403 338 370 446 3.0
Osmerus mordax 46.7 53.3 393 332 377 452 7.0
Hypomesus olidus 47.2 52.8 402 331 370 450 5.0
Stats for total rRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 48.3 51.7 673 619 580 803 10.0
Plecoglossus altivelis 50.0 50.0 701 628 557 772 3.0
Osmerus mordax 48.7 51.3 679 612 564 796 7.0
Hypomesus olidus 49.2 50.8 679 626 566 780 5.0
Stats for ATP6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 46.5 53.5 221 97 207 159 10.0
Plecoglossus altivelis 51.8 48.2 247 107 189 141 3.0
Osmerus mordax 47.2 52.8 219 104 211 150 7.0
Hypomesus olidus 46.5 53.5 214 104 217 149 5.0
Stats for ATP8 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 47.0 53.0 54 25 48 41 10.0
Plecoglossus altivelis 46.4 53.6 55 23 45 45 3.0
Osmerus mordax 49.4 50.6 55 28 44 41 7.0
Hypomesus olidus 45.8 54.2 51 26 47 44 5.0
Stats for COX1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 46.6 53.4 426 296 477 352 10.0
Plecoglossus altivelis 49.5 50.5 467 301 439 344 3.0
Osmerus mordax 49.3 50.7 446 319 460 326 7.0
Hypomesus olidus 46.9 53.1 411 317 487 336 5.0
Stats for COX2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 46.3 53.7 198 122 183 188 10.0
Plecoglossus altivelis 50.7 49.3 221 129 173 168 3.0
Osmerus mordax 46.5 53.5 199 122 186 184 7.0
Hypomesus olidus 46.2 53.8 192 127 195 177 5.0
Stats for COX3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 50.3 49.7 249 146 222 168 10.0
Plecoglossus altivelis 51.8 48.2 249 158 217 162 3.0
Osmerus mordax 49.6 50.4 251 138 218 178 7.0
Hypomesus olidus 50.1 49.9 245 148 223 169 5.0
Stats for CYTB (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 48.6 51.4 349 206 341 245 10.0
Plecoglossus altivelis 50.6 49.4 368 209 339 225 3.0
Osmerus mordax 48.2 51.8 354 196 341 250 7.0
Hypomesus olidus 47.0 53.0 332 204 359 246 5.0
Stats for ND1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 51.0 49.0 313 184 287 191 10.0
Plecoglossus altivelis 52.9 47.1 327 189 289 170 3.0
Osmerus mordax 50.4 49.6 314 175 283 199 7.0
Hypomesus olidus 49.8 50.2 305 181 301 188 5.0
Stats for ND2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 49.6 50.4 338 183 307 223 10.0
Plecoglossus altivelis 54.0 46.0 377 191 297 186 3.0
Osmerus mordax 51.2 48.8 360 178 281 232 7.0
Hypomesus olidus 51.5 48.5 352 189 301 209 5.0
Stats for ND3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 48.1 51.9 104 64 118 63 10.0
Plecoglossus altivelis 52.4 47.6 111 72 112 54 3.0
Osmerus mordax 51.3 48.7 115 64 109 61 7.0
Hypomesus olidus 51.3 48.7 109 70 111 59 5.0
Stats for ND4 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 47.6 52.4 416 242 413 310 10.0
Plecoglossus altivelis 52.6 47.4 456 271 364 290 3.0
Osmerus mordax 48.4 51.6 432 237 386 326 7.0
Hypomesus olidus 47.4 52.6 418 236 413 314 5.0
Stats for ND4L (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 50.2 49.8 97 52 88 60 10.0
Plecoglossus altivelis 55.9 44.1 112 54 78 53 3.0
Osmerus mordax 51.9 48.1 100 54 85 58 7.0
Hypomesus olidus 54.2 45.8 103 58 81 55 5.0
Stats for ND5 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 46.4 53.6 550 303 555 431 10.0
Plecoglossus altivelis 50.4 49.6 602 324 515 398 3.0
Osmerus mordax 47.4 52.6 587 285 524 443 7.0
Hypomesus olidus 47.5 52.5 576 298 535 430 5.0
Stats for ND6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 50.4 49.6 167 96 87 172 10.0
Plecoglossus altivelis 58.2 41.8 202 102 65 153 3.0
Osmerus mordax 54.0 46.0 192 90 62 178 7.0
Hypomesus olidus 51.5 48.5 178 91 74 179 5.0
Stats for 12S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 50.2 49.8 249 236 211 271 10.0
Plecoglossus altivelis 50.9 49.1 254 227 202 262 3.0
Osmerus mordax 50.7 49.3 252 227 199 267 7.0
Hypomesus olidus 51.6 48.4 252 236 201 256 5.0
Stats for 16S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Mallotus villosus 47.2 52.8 424 383 369 532 10.0
Plecoglossus altivelis 49.5 50.5 447 401 355 510 3.0
Osmerus mordax 47.6 52.4 427 385 365 529 7.0
Hypomesus olidus 47.9 52.1 427 390 365 524 5.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.