Stats for family Gadidae

Species in family:
Boreogadus saida
Gadus morhua
Gadus ogac
Lota lota
Melanogrammus aeglefinus
Merlangius merlangus
Micromesistius poutassou
Pollachius pollachius
Pollachius virens
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Stats for total mtDNA (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.0 - 45.5% 54.5 - 59.0% 4048 - 4680 2639 - 2856 4492 - 5057 4311 - 4778 7.0 - 25.0
Median 42.9% 57.1% 4276 2798 4865 4684 20.0
Average ± stdev 42.8 ± 1.4% 57.2 ± 1.4% 4292 ± 202 2761 ± 74 4804 ± 204 4622 ± 132 17.4 ± 6.4
Coefficient of variation 0.03 0.02 0.05 0.03 0.04 0.03 0.37
Pearson correlation
coefficient with log10MLS		 0.02 -0.01 0.17 -0.08 -0.01 0.22 -
Pearson p-value
(two tailed)		 9.53E-01 9.72E-01 6.71E-01 8.29E-01 9.74E-01 5.76E-01 -
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Stats for total protein-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.9 - 46.2% 53.8 - 60.1% 2850 - 3448 1667 - 1826 3208 - 3768 2923 - 3144 7.0 - 25.0
Median 42.3% 57.7% 3064 1766 3571 3029 20.0
Average ± stdev 42.4 ± 2.0% 57.6 ± 2.0% 3085 ± 183 1751 ± 52 3538 ± 170 3034 ± 61 17.4 ± 6.4
Coefficient of variation 0.05 0.03 0.06 0.03 0.05 0.02 0.37
Pearson correlation
coefficient with log10MLS		 0.06 -0.06 0.12 -0.18 -0.13 0.12 -
Pearson p-value
(two tailed)		 8.71E-01 8.70E-01 7.62E-01 6.41E-01 7.39E-01 7.64E-01 -
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Stats for D-loop (group size: 5 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
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Stats for total tRNA-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.3 - 46.5% 53.3 - 54.6% 361 - 395 303 - 322 353 - 376 429 - 469 7.0 - 25.0
Median 45.7% 54.1% 387 317 375 456 20.0
Average ± stdev 45.8 ± 0.4% 54.1 ± 0.4% 385 ± 9 315 ± 5 372 ± 6 456 ± 11 17.4 ± 6.4
Coefficient of variation 0.01 0.01 0.02 0.02 0.02 0.02 0.37
Pearson correlation
coefficient with log10MLS		 -0.49 0.66 0.17 -0.22 0.28 0.51 -
Pearson p-value
(two tailed)		 1.79E-01 5.19E-02 6.60E-01 5.63E-01 4.69E-01 1.61E-01 -
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Stats for total rRNA-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.0 - 44.6% 55.4 - 56.0% 604 - 617 540 - 553 594 - 610 846 - 864 7.0 - 25.0
Median 44.4% 55.5% 612 549 603 852 20.0
Average ± stdev 44.3 ± 0.2% 55.6 ± 0.2% 611 ± 3 548 ± 3 602 ± 4 853 ± 5 17.4 ± 6.4
Coefficient of variation 0.00 0.00 0.01 0.01 0.01 0.01 0.37
Pearson correlation
coefficient with log10MLS		 -0.42 0.46 -0.09 -0.46 0.14 0.33 -
Pearson p-value
(two tailed)		 2.64E-01 2.09E-01 8.25E-01 2.09E-01 7.23E-01 3.90E-01 -
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Stats for ATP6 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 37.3 - 45.7% 54.3 - 62.6% 174 - 216 81 - 96 193 - 244 175 - 189 7.0 - 25.0
Median 38.9% 61.1% 180 86 239 177 20.0
Average ± stdev 40.0 ± 2.9% 60.0 ± 2.9% 187 ± 14 85 ± 4 230 ± 16 179 ± 4 17.4 ± 6.4
Coefficient of variation 0.07 0.05 0.08 0.05 0.07 0.02 0.37
Pearson correlation
coefficient with log10MLS		 0.17 -0.18 0.20 0.06 -0.27 0.29 -
Pearson p-value
(two tailed)		 6.58E-01 6.50E-01 5.99E-01 8.70E-01 4.83E-01 4.42E-01 -
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Stats for ATP8 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.3 - 43.5% 56.5 - 60.7% 51 - 57 15 - 16 43 - 49 51 - 54 7.0 - 25.0
Median 41.7% 58.3% 54 16 45 53 20.0
Average ± stdev 41.7 ± 1.4% 58.3 ± 1.4% 54 ± 2 15 ± 0 45 ± 1 52 ± 0 17.4 ± 6.4
Coefficient of variation 0.03 0.02 0.04 0.03 0.04 0.02 0.37
Pearson correlation
coefficient with log10MLS		 -0.09 0.09 -0.14 0.19 0.07 0.07 -
Pearson p-value
(two tailed)		 8.15E-01 8.15E-01 7.10E-01 6.17E-01 8.60E-01 8.65E-01 -
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Stats for COX1 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.9 - 47.1% 52.9 - 59.1% 368 - 440 265 - 290 448 - 517 373 - 406 7.0 - 25.0
Median 42.7% 57.3% 387 275 492 395 20.0
Average ± stdev 43.1 ± 1.9% 56.9 ± 1.9% 393 ± 20 274 ± 6 489 ± 20 393 ± 8 17.4 ± 6.4
Coefficient of variation 0.04 0.03 0.05 0.03 0.04 0.02 0.37
Pearson correlation
coefficient with log10MLS		 0.10 -0.10 0.11 0.11 -0.13 -0.02 -
Pearson p-value
(two tailed)		 7.89E-01 7.89E-01 7.88E-01 7.82E-01 7.43E-01 9.62E-01 -
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Stats for COX2 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.4 - 43.7% 56.3 - 60.6% 163 - 197 103 - 111 189 - 215 198 - 209 7.0 - 25.0
Median 40.4% 59.6% 171 109 208 205 20.0
Average ± stdev 40.8 ± 1.6% 59.2 ± 1.6% 174 ± 10 107 ± 2 205 ± 7 204 ± 3 17.4 ± 6.4
Coefficient of variation 0.04 0.03 0.06 0.02 0.04 0.02 0.37
Pearson correlation
coefficient with log10MLS		 0.29 -0.29 0.37 -0.44 -0.45 0.05 -
Pearson p-value
(two tailed)		 4.48E-01 4.48E-01 3.29E-01 2.37E-01 2.24E-01 9.05E-01 -
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Stats for COX3 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.1 - 46.4% 53.6 - 58.9% 191 - 232 128 - 136 228 - 260 193 - 209 7.0 - 25.0
Median 43.6% 56.4% 209 133 247 202 20.0
Average ± stdev 43.6 ± 1.6% 56.4 ± 1.6% 210 ± 11 132 ± 2 242 ± 10 200 ± 4 17.4 ± 6.4
Coefficient of variation 0.04 0.03 0.06 0.02 0.04 0.02 0.37
Pearson correlation
coefficient with log10MLS		 0.10 -0.11 0.18 -0.37 -0.09 -0.09 -
Pearson p-value
(two tailed)		 7.89E-01 7.78E-01 6.49E-01 3.23E-01 8.18E-01 8.18E-01 -
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Stats for CYTB (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.2 - 45.8% 54.2 - 60.8% 275 - 337 165 - 186 348 - 415 270 - 301 7.0 - 25.0
Median 42.0% 58.0% 305 180 379 279 20.0
Average ± stdev 42.0 ± 1.9% 58.0 ± 1.9% 303 ± 17 177 ± 6 380 ± 18 282 ± 9 17.4 ± 6.4
Coefficient of variation 0.05 0.03 0.06 0.04 0.05 0.03 0.37
Pearson correlation
coefficient with log10MLS		 -0.02 0.02 0.08 -0.36 -0.13 0.22 -
Pearson p-value
(two tailed)		 9.53E-01 9.53E-01 8.43E-01 3.44E-01 7.41E-01 5.78E-01 -
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Stats for ND1 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.0 - 46.9% 53.1 - 59.0% 241 - 290 147 - 169 285 - 342 221 - 242 7.0 - 25.0
Median 43.8% 56.2% 267 160 316 233 20.0
Average ± stdev 43.8 ± 1.9% 56.2 ± 1.9% 267 ± 14 159 ± 6 314 ± 16 232 ± 6 17.4 ± 6.4
Coefficient of variation 0.04 0.03 0.05 0.04 0.05 0.03 0.37
Pearson correlation
coefficient with log10MLS		 -0.00 -0.00 -0.01 -0.01 -0.06 0.12 -
Pearson p-value
(two tailed)		 9.99E-01 9.95E-01 9.88E-01 9.80E-01 8.69E-01 7.62E-01 -
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Stats for ND2 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.9 - 47.7% 52.3 - 61.1% 273 - 344 132 - 156 280 - 336 267 - 304 7.0 - 25.0
Median 41.7% 58.3% 290 143 329 285 20.0
Average ± stdev 42.0 ± 2.6% 58.0 ± 2.6% 294 ± 23 143 ± 8 321 ± 17 285 ± 11 17.4 ± 6.4
Coefficient of variation 0.06 0.05 0.08 0.06 0.05 0.04 0.37
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.18 -0.02 -0.23 0.02 -
Pearson p-value
(two tailed)		 6.96E-01 7.01E-01 6.39E-01 9.49E-01 5.50E-01 9.65E-01 -
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Stats for ND3 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.7 - 45.8% 54.2 - 61.3% 85 - 111 48 - 61 109 - 132 73 - 85 7.0 - 25.0
Median 42.7% 57.3% 94 54 121 81 20.0
Average ± stdev 42.9 ± 2.6% 57.1 ± 2.6% 95 ± 8 54 ± 4 119 ± 7 79 ± 3 17.4 ± 6.4
Coefficient of variation 0.06 0.05 0.09 0.08 0.06 0.05 0.37
Pearson correlation
coefficient with log10MLS		 0.13 -0.13 0.26 -0.26 -0.16 0.00 -
Pearson p-value
(two tailed)		 7.41E-01 7.41E-01 5.04E-01 4.98E-01 6.87E-01 1.00E+00 -
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Stats for ND4 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 38.0 - 45.9% 54.1 - 62.0% 321 - 425 196 - 221 392 - 487 342 - 374 7.0 - 25.0
Median 41.3% 58.7% 365 205 450 360 20.0
Average ± stdev 41.6 ± 2.8% 58.4 ± 2.8% 367 ± 33 206 ± 7 446 ± 29 359 ± 9 17.4 ± 6.4
Coefficient of variation 0.07 0.05 0.09 0.04 0.07 0.03 0.37
Pearson correlation
coefficient with log10MLS		 0.08 -0.08 0.05 0.13 -0.01 -0.28 -
Pearson p-value
(two tailed)		 8.39E-01 8.39E-01 8.96E-01 7.45E-01 9.73E-01 4.58E-01 -
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Stats for ND4L (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.1 - 48.5% 51.5 - 57.9% 82 - 98 40 - 49 83 - 99 68 - 76 7.0 - 25.0
Median 46.8% 53.2% 92 46 89 69 20.0
Average ± stdev 46.0 ± 2.1% 54.0 ± 2.1% 91 ± 4 45 ± 2 90 ± 4 70 ± 2 17.4 ± 6.4
Coefficient of variation 0.05 0.04 0.05 0.06 0.05 0.04 0.37
Pearson correlation
coefficient with log10MLS		 -0.16 0.16 -0.13 -0.08 0.05 0.27 -
Pearson p-value
(two tailed)		 6.88E-01 6.88E-01 7.34E-01 8.40E-01 9.08E-01 4.85E-01 -
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Stats for ND5 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.4 - 45.6% 54.4 - 60.6% 466 - 556 250 - 284 513 - 588 487 - 538 7.0 - 25.0
Median 41.3% 58.7% 490 270 572 511 20.0
Average ± stdev 41.4 ± 1.8% 58.6 ± 1.8% 492 ± 26 268 ± 11 565 ± 23 511 ± 14 17.4 ± 6.4
Coefficient of variation 0.04 0.03 0.05 0.04 0.04 0.03 0.37
Pearson correlation
coefficient with log10MLS		 -0.13 0.13 0.06 -0.51 -0.07 0.38 -
Pearson p-value
(two tailed)		 7.48E-01 7.44E-01 8.75E-01 1.60E-01 8.62E-01 3.08E-01 -
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Stats for ND6 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.1 - 49.6% 50.4 - 55.9% 152 - 170 74 - 89 80 - 99 181 - 202 7.0 - 25.0
Median 45.6% 54.4% 155 79 94 193 20.0
Average ± stdev 45.7 ± 2.0% 54.3 ± 2.0% 158 ± 6 80 ± 5 91 ± 6 192 ± 6 17.4 ± 6.4
Coefficient of variation 0.04 0.04 0.04 0.07 0.07 0.03 0.37
Pearson correlation
coefficient with log10MLS		 0.05 -0.05 0.07 0.01 -0.06 -0.02 -
Pearson p-value
(two tailed)		 8.93E-01 8.93E-01 8.55E-01 9.72E-01 8.88E-01 9.50E-01 -
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Stats for 12S rRNA gene (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.2 - 46.0% 54.0 - 54.8% 220 - 225 205 - 210 210 - 217 301 - 306 7.0 - 25.0
Median 45.5% 54.4% 225 209 215 304 20.0
Average ± stdev 45.5 ± 0.3% 54.5 ± 0.3% 223 ± 1 208 ± 1 214 ± 2 303 ± 1 17.4 ± 6.4
Coefficient of variation 0.01 0.01 0.01 0.01 0.01 0.01 0.37
Pearson correlation
coefficient with log10MLS		 -0.06 0.09 -0.37 0.08 0.31 -0.45 -
Pearson p-value
(two tailed)		 8.77E-01 8.23E-01 3.33E-01 8.34E-01 4.24E-01 2.27E-01 -
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Stats for 16S rRNA gene (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.3 - 44.0% 56.0 - 56.7% 384 - 392 335 - 347 384 - 393 544 - 558 7.0 - 25.0
Median 43.7% 56.3% 388 340 388 550 20.0
Average ± stdev 43.7 ± 0.2% 56.3 ± 0.2% 387 ± 2 340 ± 3 388 ± 3 549 ± 4 17.4 ± 6.4
Coefficient of variation 0.00 0.00 0.01 0.01 0.01 0.01 0.37
Pearson correlation
coefficient with log10MLS		 -0.56 0.60 0.09 -0.56 -0.01 0.53 -
Pearson p-value
(two tailed)		 1.16E-01 9.04E-02 8.14E-01 1.16E-01 9.86E-01 1.40E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.