Stats for order Galliformes
Browsing families:
| Stats for total mtDNA (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.5 - 47.3% | 52.7 - 56.5% | 5034 - 5444 | 2175 - 2506 | 3894 - 4308 | 4825 - 5200 | 5.0 - 30.0 |
| Median | 44.7% | 55.3% | 5206 | 2256 | 4109 | 5075 | 13.0 |
| Average ± stdev | 45.1 ± 1.2% | 54.9 ± 1.2% | 5245 ± 130 | 2278 ± 84 | 4107 ± 125 | 5063 ± 99 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.02 | 0.04 | 0.03 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.24 | -0.24 | 0.23 | 0.21 | -0.10 | -0.29 | - |
| Pearson p-value (two tailed) |
3.95E-01 | 3.94E-01 | 4.13E-01 | 4.54E-01 | 7.27E-01 | 3.03E-01 | - |
| Stats for total protein-coding genes (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.0 - 48.0% | 52.0 - 56.0% | 3651 - 3975 | 1291 - 1565 | 2657 - 2948 | 3170 - 3495 | 5.0 - 30.0 |
| Median | 45.1% | 54.9% | 3793 | 1357 | 2812 | 3387 | 13.0 |
| Average ± stdev | 45.6 ± 1.3% | 54.4 ± 1.3% | 3814 ± 96 | 1374 ± 69 | 2805 ± 97 | 3377 ± 79 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.05 | 0.03 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.23 | -0.23 | 0.16 | 0.23 | -0.09 | -0.31 | - |
| Pearson p-value (two tailed) |
4.05E-01 | 4.03E-01 | 5.68E-01 | 4.01E-01 | 7.59E-01 | 2.59E-01 | - |
| Stats for D-loop (group size: 11 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.8 - 42.8% | 57.2 - 60.2% | 293 - 404 | 148 - 245 | 360 - 475 | 293 - 431 | 5.0 - 27.0 |
| Median | 40.6% | 59.4% | 310 | 164 | 378 | 310 | 13.0 |
| Average ± stdev | 40.8 ± 0.9% | 59.2 ± 0.9% | 316 ± 29 | 168 ± 24 | 385 ± 29 | 317 ± 36 | 13.7 ± 6.8 |
| Coefficient of variation | 0.02 | 0.02 | 0.09 | 0.15 | 0.08 | 0.12 | 0.49 |
| Pearson correlation coefficient with log10MLS |
-0.04 | 0.04 | -0.31 | -0.47 | -0.52 | -0.34 | - |
| Pearson p-value (two tailed) |
9.07E-01 | 9.07E-01 | 3.56E-01 | 1.48E-01 | 1.03E-01 | 3.02E-01 | - |
| Stats for total tRNA-coding genes (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.4 - 43.8% | 56.2 - 58.6% | 378 - 413 | 258 - 281 | 375 - 394 | 488 - 520 | 5.0 - 30.0 |
| Median | 42.6% | 57.4% | 392 | 269 | 384 | 504 | 13.0 |
| Average ± stdev | 42.6 ± 0.7% | 57.4 ± 0.7% | 391 ± 9 | 268 ± 6 | 385 ± 5 | 503 ± 7 | 14.9 ± 7.8 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
-0.00 | 0.01 | 0.34 | -0.18 | 0.27 | 0.19 | - |
| Pearson p-value (two tailed) |
9.87E-01 | 9.67E-01 | 2.21E-01 | 5.19E-01 | 3.24E-01 | 4.95E-01 | - |
| Stats for total rRNA-coding genes (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 47.9% | 52.1 - 56.1% | 670 - 749 | 462 - 495 | 500 - 570 | 838 - 892 | 5.0 - 30.0 |
| Median | 45.9% | 54.1% | 705 | 472 | 530 | 862 | 13.0 |
| Average ± stdev | 45.9 ± 1.2% | 54.1 ± 1.2% | 711 ± 23 | 474 ± 8 | 533 ± 19 | 864 ± 16 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.02 | 0.04 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.36 | -0.36 | 0.29 | 0.40 | -0.17 | -0.46 | - |
| Pearson p-value (two tailed) |
1.91E-01 | 1.92E-01 | 3.01E-01 | 1.40E-01 | 5.47E-01 | 8.62E-02 | - |
| Stats for ATP6 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 49.0% | 51.0 - 56.1% | 230 - 264 | 64 - 78 | 154 - 193 | 178 - 203 | 5.0 - 30.0 |
| Median | 45.8% | 54.2% | 246 | 69 | 175 | 193 | 13.0 |
| Average ± stdev | 46.1 ± 1.5% | 53.9 ± 1.5% | 245 ± 9 | 69 ± 3 | 177 ± 10 | 191 ± 6 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.03 | 0.04 | 0.06 | 0.06 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | 0.15 | 0.07 | -0.12 | -0.08 | - |
| Pearson p-value (two tailed) |
5.54E-01 | 5.54E-01 | 5.85E-01 | 7.91E-01 | 6.76E-01 | 7.78E-01 | - |
| Stats for ATP8 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.1 - 45.5% | 54.5 - 61.9% | 54 - 66 | 6 - 12 | 32 - 43 | 53 - 67 | 5.0 - 30.0 |
| Median | 40.6% | 59.4% | 58 | 9 | 40 | 58 | 13.0 |
| Average ± stdev | 41.1 ± 2.4% | 58.9 ± 2.4% | 58 ± 3 | 9 ± 1 | 39 ± 2 | 58 ± 3 | 14.9 ± 7.8 |
| Coefficient of variation | 0.06 | 0.04 | 0.06 | 0.19 | 0.07 | 0.06 | 0.52 |
| Pearson correlation coefficient with log10MLS |
-0.06 | 0.06 | -0.09 | -0.08 | 0.21 | -0.22 | - |
| Pearson p-value (two tailed) |
8.38E-01 | 8.38E-01 | 7.41E-01 | 7.69E-01 | 4.51E-01 | 4.28E-01 | - |
| Stats for COX1 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.4 - 49.0% | 51.0 - 55.6% | 438 - 496 | 239 - 275 | 394 - 443 | 390 - 435 | 5.0 - 30.0 |
| Median | 45.8% | 54.2% | 464 | 251 | 416 | 420 | 13.0 |
| Average ± stdev | 46.1 ± 1.5% | 53.9 ± 1.5% | 462 ± 16 | 253 ± 9 | 417 ± 16 | 417 ± 12 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.03 | 0.04 | 0.04 | 0.04 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
-0.04 | 0.04 | -0.11 | 0.10 | 0.21 | -0.22 | - |
| Pearson p-value (two tailed) |
9.00E-01 | 9.00E-01 | 6.93E-01 | 7.23E-01 | 4.58E-01 | 4.33E-01 | - |
| Stats for COX2 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.1 - 47.8% | 52.2 - 56.9% | 197 - 228 | 90 - 113 | 156 - 182 | 198 - 215 | 5.0 - 30.0 |
| Median | 44.7% | 55.3% | 209 | 99 | 173 | 204 | 13.0 |
| Average ± stdev | 45.0 ± 1.4% | 55.0 ± 1.4% | 209 ± 8 | 98 ± 5 | 170 ± 8 | 205 ± 4 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.04 | 0.06 | 0.05 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | -0.03 | 0.32 | 0.08 | -0.45 | - |
| Pearson p-value (two tailed) |
5.53E-01 | 5.53E-01 | 9.05E-01 | 2.39E-01 | 7.77E-01 | 9.57E-02 | - |
| Stats for COX3 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.4 - 50.9% | 49.1 - 55.6% | 234 - 269 | 114 - 130 | 179 - 218 | 199 - 226 | 5.0 - 30.0 |
| Median | 46.6% | 53.4% | 244 | 119 | 200 | 218 | 13.0 |
| Average ± stdev | 46.8 ± 1.8% | 53.2 ± 1.8% | 247 ± 10 | 119 ± 4 | 199 ± 10 | 217 ± 6 | 14.9 ± 7.8 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.04 | 0.05 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.37 | -0.37 | 0.38 | 0.24 | -0.47 | -0.00 | - |
| Pearson p-value (two tailed) |
1.75E-01 | 1.75E-01 | 1.57E-01 | 3.84E-01 | 8.04E-02 | 9.92E-01 | - |
| Stats for CYTB (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.3 - 49.1% | 50.9 - 54.7% | 380 - 415 | 131 - 153 | 273 - 309 | 301 - 334 | 5.0 - 30.0 |
| Median | 46.9% | 53.1% | 399 | 138 | 287 | 319 | 13.0 |
| Average ± stdev | 47.0 ± 1.2% | 53.0 ± 1.2% | 397 ± 10 | 139 ± 6 | 286 ± 8 | 318 ± 10 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.04 | 0.03 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.20 | -0.20 | 0.04 | 0.36 | 0.15 | -0.37 | - |
| Pearson p-value (two tailed) |
4.72E-01 | 4.72E-01 | 8.81E-01 | 1.85E-01 | 5.97E-01 | 1.70E-01 | - |
| Stats for ND1 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.2 - 48.8% | 51.2 - 55.8% | 309 - 350 | 113 - 152 | 240 - 273 | 247 - 275 | 5.0 - 30.0 |
| Median | 46.5% | 53.5% | 328 | 120 | 261 | 265 | 13.0 |
| Average ± stdev | 46.4 ± 1.3% | 53.6 ± 1.3% | 329 ± 10 | 123 ± 9 | 259 ± 9 | 263 ± 7 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.08 | 0.04 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.28 | -0.28 | 0.15 | 0.19 | -0.27 | -0.13 | - |
| Pearson p-value (two tailed) |
3.17E-01 | 3.17E-01 | 5.89E-01 | 4.88E-01 | 3.29E-01 | 6.52E-01 | - |
| Stats for ND2 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 46.4% | 53.6 - 59.1% | 332 - 376 | 83 - 116 | 239 - 290 | 304 - 339 | 5.0 - 30.0 |
| Median | 42.8% | 57.2% | 354 | 93 | 263 | 327 | 13.0 |
| Average ± stdev | 43.2 ± 1.6% | 56.8 ± 1.6% | 354 ± 13 | 94 ± 8 | 262 ± 13 | 327 ± 9 | 14.9 ± 7.8 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.09 | 0.05 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.27 | -0.27 | 0.14 | 0.28 | -0.30 | -0.03 | - |
| Pearson p-value (two tailed) |
3.26E-01 | 3.26E-01 | 6.07E-01 | 3.18E-01 | 2.71E-01 | 9.13E-01 | - |
| Stats for ND3 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.3 - 48.3% | 51.7 - 55.7% | 112 - 126 | 40 - 46 | 84 - 100 | 87 - 105 | 5.0 - 30.0 |
| Median | 45.7% | 54.3% | 118 | 43 | 92 | 98 | 13.0 |
| Average ± stdev | 46.0 ± 1.2% | 53.9 ± 1.3% | 118 ± 3 | 43 ± 2 | 91 ± 4 | 97 ± 5 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.05 | 0.05 | 0.05 | 0.52 |
| Pearson correlation coefficient with log10MLS |
-0.02 | -0.02 | -0.00 | -0.06 | -0.09 | 0.06 | - |
| Pearson p-value (two tailed) |
9.47E-01 | 9.53E-01 | 9.93E-01 | 8.39E-01 | 7.37E-01 | 8.44E-01 | - |
| Stats for ND4 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.4 - 46.3% | 53.7 - 58.6% | 444 - 498 | 127 - 154 | 313 - 359 | 404 - 448 | 5.0 - 30.0 |
| Median | 44.7% | 55.3% | 477 | 135 | 337 | 429 | 13.0 |
| Average ± stdev | 44.4 ± 1.5% | 55.6 ± 1.5% | 474 ± 15 | 137 ± 8 | 338 ± 13 | 427 ± 11 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.03 | 0.03 | 0.06 | 0.04 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.36 | -0.36 | 0.25 | 0.40 | -0.02 | -0.59 | - |
| Pearson p-value (two tailed) |
1.90E-01 | 1.90E-01 | 3.68E-01 | 1.44E-01 | 9.30E-01 | 1.96E-02 | - |
| Stats for ND4L (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.4 - 49.8% | 50.2 - 55.6% | 98 - 110 | 34 - 45 | 68 - 85 | 72 - 86 | 5.0 - 30.0 |
| Median | 47.1% | 52.9% | 103 | 37 | 76 | 79 | 13.0 |
| Average ± stdev | 47.4 ± 1.7% | 52.6 ± 1.7% | 103 ± 3 | 37 ± 2 | 76 ± 3 | 79 ± 4 | 14.9 ± 7.8 |
| Coefficient of variation | 0.04 | 0.03 | 0.03 | 0.08 | 0.05 | 0.05 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.44 | -0.43 | 0.37 | 0.29 | -0.24 | -0.27 | - |
| Pearson p-value (two tailed) |
1.05E-01 | 1.08E-01 | 1.79E-01 | 3.03E-01 | 3.89E-01 | 3.34E-01 | - |
| Stats for ND5 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.1 - 48.1% | 51.9 - 56.9% | 594 - 649 | 184 - 246 | 389 - 459 | 532 - 584 | 5.0 - 30.0 |
| Median | 45.3% | 54.7% | 627 | 194 | 425 | 568 | 13.0 |
| Average ± stdev | 45.4 ± 1.4% | 54.6 ± 1.4% | 623 ± 16 | 200 ± 15 | 427 ± 18 | 565 ± 14 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.03 | 0.03 | 0.08 | 0.04 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.17 | -0.17 | 0.22 | 0.03 | 0.06 | -0.39 | - |
| Pearson p-value (two tailed) |
5.48E-01 | 5.47E-01 | 4.32E-01 | 9.07E-01 | 8.45E-01 | 1.56E-01 | - |
| Stats for ND6 (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 49.8% | 50.2 - 56.1% | 178 - 209 | 42 - 57 | 51 - 72 | 207 - 229 | 5.0 - 30.0 |
| Median | 46.6% | 53.4% | 190 | 49 | 61 | 217 | 13.0 |
| Average ± stdev | 46.6 ± 1.7% | 53.4 ± 1.7% | 193 ± 7 | 49 ± 4 | 61 ± 5 | 217 ± 6 | 14.9 ± 7.8 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.09 | 0.09 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.13 | -0.13 | 0.01 | 0.24 | -0.13 | -0.06 | - |
| Pearson p-value (two tailed) |
6.46E-01 | 6.46E-01 | 9.70E-01 | 3.82E-01 | 6.54E-01 | 8.40E-01 | - |
| Stats for 12S rRNA gene (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.9 - 50.0% | 50.0 - 55.1% | 254 - 302 | 176 - 194 | 181 - 209 | 306 - 339 | 5.0 - 30.0 |
| Median | 47.4% | 52.6% | 273 | 183 | 195 | 318 | 13.0 |
| Average ± stdev | 47.2 ± 1.5% | 52.8 ± 1.5% | 276 ± 12 | 183 ± 5 | 194 ± 7 | 319 ± 9 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.03 | 0.05 | 0.03 | 0.04 | 0.03 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.44 | -0.44 | 0.35 | 0.25 | -0.10 | -0.60 | - |
| Pearson p-value (two tailed) |
1.02E-01 | 1.02E-01 | 2.06E-01 | 3.69E-01 | 7.34E-01 | 1.70E-02 | - |
| Stats for 16S rRNA gene (group size: 15 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.3 - 47.3% | 52.7 - 56.7% | 412 - 461 | 282 - 303 | 315 - 364 | 532 - 565 | 5.0 - 30.0 |
| Median | 44.8% | 55.2% | 433 | 291 | 341 | 544 | 13.0 |
| Average ± stdev | 45.1 ± 1.2% | 54.9 ± 1.2% | 435 ± 13 | 290 ± 5 | 339 ± 13 | 545 ± 10 | 14.9 ± 7.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.02 | 0.04 | 0.02 | 0.52 |
| Pearson correlation coefficient with log10MLS |
0.23 | -0.23 | 0.16 | 0.37 | -0.19 | -0.18 | - |
| Pearson p-value (two tailed) |
4.11E-01 | 4.10E-01 | 5.67E-01 | 1.73E-01 | 5.07E-01 | 5.31E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions