Stats for family Elapidae
Species in family:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.4 - 41.7% | 58.3 - 63.6% | 4253 - 5005 | 2019 - 2302 | 4300 - 5057 | 5596 - 5905 | 11.7 - 32.3 |
| Median | 41.5% | 58.6% | 4887 | 2278 | 4671 | 5686 | 19.0 |
| Average ± stdev | 40.2 ± 2.2% | 59.8 ± 2.2% | 4741 ± 273 | 2195 ± 103 | 4606 ± 289 | 5718 ± 103 | 18.7 ± 7.1 |
| Coefficient of variation | 0.05 | 0.04 | 0.06 | 0.05 | 0.06 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.53 | -0.53 | 0.54 | 0.42 | -0.53 | -0.16 | - |
| Pearson p-value (two tailed) |
2.85E-01 | 2.85E-01 | 2.71E-01 | 4.04E-01 | 2.80E-01 | 7.63E-01 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.2 - 41.7% | 58.3 - 64.8% | 2790 - 3397 | 1164 - 1373 | 2778 - 3373 | 3605 - 3911 | 11.7 - 32.3 |
| Median | 41.4% | 58.9% | 3313 | 1347 | 2978 | 3766 | 19.0 |
| Average ± stdev | 39.8 ± 2.7% | 60.2 ± 2.7% | 3186 ± 218 | 1290 ± 76 | 2996 ± 228 | 3772 ± 95 | 18.7 ± 7.1 |
| Coefficient of variation | 0.07 | 0.04 | 0.07 | 0.06 | 0.08 | 0.03 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.52 | -0.52 | 0.54 | 0.35 | -0.55 | -0.20 | - |
| Pearson p-value (two tailed) |
2.90E-01 | 2.90E-01 | 2.73E-01 | 5.01E-01 | 2.63E-01 | 7.07E-01 | - |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.6 - 44.1% | 55.9 - 60.4% | 333 - 408 | 228 - 256 | 349 - 383 | 458 - 483 | 11.7 - 32.3 |
| Median | 43.5% | 57.6% | 369 | 254 | 362 | 466 | 19.0 |
| Average ± stdev | 42.3 ± 1.8% | 57.7 ± 1.8% | 362 ± 24 | 247 ± 9 | 364 ± 13 | 468 ± 10 | 18.7 ± 7.1 |
| Coefficient of variation | 0.04 | 0.03 | 0.07 | 0.04 | 0.04 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.53 | -0.53 | 0.51 | 0.41 | -0.51 | -0.06 | - |
| Pearson p-value (two tailed) |
2.83E-01 | 2.83E-01 | 3.00E-01 | 4.24E-01 | 2.99E-01 | 9.05E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.1 - 43.3% | 56.7 - 60.9% | 551 - 632 | 389 - 422 | 478 - 548 | 858 - 914 | 11.7 - 32.3 |
| Median | 42.5% | 57.6% | 615 | 411 | 500 | 902 | 19.0 |
| Average ± stdev | 41.9 ± 1.6% | 58.1 ± 1.6% | 602 ± 27 | 407 ± 10 | 507 ± 24 | 891 ± 18 | 18.7 ± 7.1 |
| Coefficient of variation | 0.04 | 0.03 | 0.05 | 0.03 | 0.05 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.48 | -0.48 | 0.48 | 0.51 | -0.51 | -0.11 | - |
| Pearson p-value (two tailed) |
3.33E-01 | 3.34E-01 | 3.39E-01 | 3.05E-01 | 3.04E-01 | 8.37E-01 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 34.1 - 40.0% | 60.0 - 65.9% | 167 - 203 | 59 - 71 | 182 - 213 | 226 - 240 | 11.7 - 32.3 |
| Median | 38.6% | 62.0% | 200 | 65 | 185 | 235 | 19.0 |
| Average ± stdev | 37.5 ± 2.5% | 62.4 ± 2.5% | 190 ± 13 | 64 ± 4 | 191 ± 12 | 233 ± 5 | 18.7 ± 7.1 |
| Coefficient of variation | 0.07 | 0.04 | 0.07 | 0.07 | 0.07 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.52 | -0.52 | 0.52 | 0.21 | -0.55 | -0.25 | - |
| Pearson p-value (two tailed) |
2.90E-01 | 2.91E-01 | 2.94E-01 | 6.85E-01 | 2.53E-01 | 6.37E-01 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 27.7 - 40.6% | 59.4 - 72.3% | 36 - 49 | 7 - 18 | 31 - 51 | 64 - 76 | 11.7 - 32.3 |
| Median | 37.0% | 63.0% | 49 | 15 | 39 | 67 | 19.0 |
| Average ± stdev | 35.1 ± 5.9% | 64.9 ± 5.9% | 44 ± 5 | 13 ± 4 | 38 ± 6 | 67 ± 3 | 18.7 ± 7.1 |
| Coefficient of variation | 0.17 | 0.09 | 0.12 | 0.34 | 0.18 | 0.06 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | 0.52 | 0.42 | -0.42 | -0.24 | - |
| Pearson p-value (two tailed) |
3.20E-01 | 3.20E-01 | 2.85E-01 | 4.11E-01 | 4.03E-01 | 6.47E-01 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.1 - 45.7% | 54.3 - 61.9% | 375 - 462 | 235 - 270 | 424 - 522 | 432 - 471 | 11.7 - 32.3 |
| Median | 44.1% | 56.7% | 451 | 262 | 463 | 449 | 19.0 |
| Average ± stdev | 43.1 ± 2.8% | 56.9 ± 2.8% | 435 ± 29 | 255 ± 12 | 459 ± 34 | 452 ± 13 | 18.7 ± 7.1 |
| Coefficient of variation | 0.06 | 0.05 | 0.07 | 0.05 | 0.08 | 0.03 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.48 | -0.48 | 0.51 | 0.29 | -0.52 | -0.12 | - |
| Pearson p-value (two tailed) |
3.41E-01 | 3.41E-01 | 2.97E-01 | 5.76E-01 | 2.88E-01 | 8.24E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.6 - 44.8% | 55.2 - 60.4% | 167 - 198 | 104 - 115 | 145 - 185 | 225 - 239 | 11.7 - 32.3 |
| Median | 43.9% | 56.1% | 191 | 110 | 161 | 230 | 19.0 |
| Average ± stdev | 42.9 ± 2.2% | 57.1 ± 2.2% | 184 ± 12 | 109 ± 3 | 162 ± 16 | 230 ± 4 | 18.7 ± 7.1 |
| Coefficient of variation | 0.05 | 0.04 | 0.07 | 0.03 | 0.10 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.47 | -0.47 | 0.47 | 0.19 | -0.50 | 0.40 | - |
| Pearson p-value (two tailed) |
3.53E-01 | 3.53E-01 | 3.46E-01 | 7.22E-01 | 3.16E-01 | 4.37E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.3 - 45.5% | 54.5 - 61.7% | 192 - 237 | 108 - 132 | 193 - 242 | 221 - 242 | 11.7 - 32.3 |
| Median | 45.0% | 55.1% | 225 | 128 | 207 | 238 | 19.0 |
| Average ± stdev | 43.4 ± 3.0% | 56.6 ± 3.0% | 219 ± 14 | 120 ± 9 | 212 ± 15 | 231 ± 8 | 18.7 ± 7.1 |
| Coefficient of variation | 0.07 | 0.05 | 0.07 | 0.08 | 0.07 | 0.04 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | 0.52 | 0.46 | -0.53 | -0.40 | - |
| Pearson p-value (two tailed) |
2.56E-01 | 2.56E-01 | 2.86E-01 | 3.62E-01 | 2.79E-01 | 4.37E-01 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.5 - 41.9% | 58.1 - 64.5% | 286 - 351 | 108 - 127 | 299 - 367 | 325 - 350 | 11.7 - 32.3 |
| Median | 41.0% | 59.0% | 332 | 120 | 323 | 349 | 19.0 |
| Average ± stdev | 39.7 ± 2.7% | 60.3 ± 2.8% | 324 ± 23 | 118 ± 7 | 330 ± 22 | 342 ± 8 | 18.7 ± 7.1 |
| Coefficient of variation | 0.07 | 0.05 | 0.07 | 0.06 | 0.07 | 0.03 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.54 | -0.54 | 0.53 | 0.46 | -0.54 | -0.23 | - |
| Pearson p-value (two tailed) |
2.69E-01 | 2.72E-01 | 2.81E-01 | 3.63E-01 | 2.69E-01 | 6.58E-01 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 36.7 - 42.9% | 57.1 - 63.3% | 260 - 311 | 94 - 115 | 239 - 278 | 295 - 339 | 11.7 - 32.3 |
| Median | 41.6% | 58.4% | 286 | 108 | 256 | 313 | 19.0 |
| Average ± stdev | 40.6 ± 2.6% | 59.4 ± 2.6% | 283 ± 19 | 107 ± 7 | 256 ± 13 | 314 ± 12 | 18.7 ± 7.1 |
| Coefficient of variation | 0.06 | 0.04 | 0.07 | 0.07 | 0.05 | 0.04 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.53 | -0.53 | 0.48 | 0.24 | -0.62 | -0.39 | - |
| Pearson p-value (two tailed) |
2.74E-01 | 2.74E-01 | 3.35E-01 | 6.49E-01 | 1.88E-01 | 4.51E-01 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 33.8 - 40.4% | 59.6 - 66.2% | 268 - 319 | 80 - 101 | 229 - 279 | 375 - 403 | 11.7 - 32.3 |
| Median | 38.6% | 61.5% | 307 | 93 | 244 | 389 | 19.0 |
| Average ± stdev | 38.1 ± 2.4% | 61.9 ± 2.4% | 299 ± 18 | 92 ± 6 | 249 ± 17 | 388 ± 8 | 18.7 ± 7.1 |
| Coefficient of variation | 0.06 | 0.04 | 0.06 | 0.08 | 0.07 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.47 | -0.47 | 0.55 | 0.06 | -0.60 | -0.04 | - |
| Pearson p-value (two tailed) |
3.43E-01 | 3.43E-01 | 2.58E-01 | 9.13E-01 | 2.07E-01 | 9.37E-01 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 32.4 - 45.5% | 54.5 - 67.6% | 76 - 113 | 35 - 43 | 83 - 112 | 101 - 122 | 11.7 - 32.3 |
| Median | 42.0% | 61.2% | 107 | 38 | 97 | 116 | 19.0 |
| Average ± stdev | 39.0 ± 5.2% | 61.0 ± 5.2% | 95 ± 14 | 38 ± 2 | 94 ± 11 | 114 ± 6 | 18.7 ± 7.1 |
| Coefficient of variation | 0.13 | 0.09 | 0.16 | 0.06 | 0.12 | 0.06 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | 0.54 | 0.36 | -0.50 | -0.46 | - |
| Pearson p-value (two tailed) |
2.63E-01 | 2.63E-01 | 2.68E-01 | 4.77E-01 | 3.09E-01 | 3.59E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 35.5 - 41.7% | 58.3 - 64.5% | 354 - 423 | 120 - 150 | 327 - 404 | 413 - 459 | 11.7 - 32.3 |
| Median | 41.2% | 59.2% | 417 | 134 | 366 | 452 | 19.0 |
| Average ± stdev | 39.8 ± 2.5% | 60.2 ± 2.5% | 401 ± 23 | 131 ± 11 | 360 ± 29 | 444 ± 15 | 18.7 ± 7.1 |
| Coefficient of variation | 0.06 | 0.04 | 0.06 | 0.08 | 0.08 | 0.04 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.54 | -0.54 | 0.52 | 0.38 | -0.47 | -0.18 | - |
| Pearson p-value (two tailed) |
2.73E-01 | 2.73E-01 | 2.96E-01 | 4.57E-01 | 3.53E-01 | 7.26E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 32.4 - 39.2% | 60.8 - 67.6% | 65 - 82 | 28 - 35 | 82 - 93 | 90 - 106 | 11.7 - 32.3 |
| Median | 37.8% | 62.4% | 76 | 34 | 84 | 97 | 19.0 |
| Average ± stdev | 36.7 ± 2.4% | 63.3 ± 2.4% | 74 ± 5 | 32 ± 2 | 86 ± 4 | 97 ± 5 | 18.7 ± 7.1 |
| Coefficient of variation | 0.07 | 0.04 | 0.07 | 0.08 | 0.05 | 0.06 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.25 | -0.25 | 0.36 | -0.08 | -0.55 | 0.11 | - |
| Pearson p-value (two tailed) |
6.33E-01 | 6.33E-01 | 4.80E-01 | 8.74E-01 | 2.57E-01 | 8.29E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 32.0 - 39.2% | 60.8 - 68.0% | 415 - 524 | 151 - 188 | 433 - 550 | 606 - 665 | 11.7 - 32.3 |
| Median | 38.8% | 61.8% | 506 | 186 | 484 | 643 | 19.0 |
| Average ± stdev | 37.1 ± 2.8% | 62.9 ± 2.8% | 486 ± 36 | 171 ± 15 | 476 ± 43 | 637 ± 19 | 18.7 ± 7.1 |
| Coefficient of variation | 0.08 | 0.04 | 0.08 | 0.09 | 0.09 | 0.03 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.45 | -0.45 | 0.50 | 0.21 | -0.50 | 0.16 | - |
| Pearson p-value (two tailed) |
3.70E-01 | 3.70E-01 | 3.15E-01 | 6.94E-01 | 3.18E-01 | 7.64E-01 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 31.7 - 41.4% | 58.6 - 68.3% | 128 - 160 | 29 - 47 | 72 - 96 | 216 - 242 | 11.7 - 32.3 |
| Median | 39.0% | 61.3% | 157 | 39 | 79 | 226 | 19.0 |
| Average ± stdev | 37.8 ± 3.5% | 62.2 ± 3.5% | 149 ± 11 | 39 ± 6 | 81 ± 8 | 227 ± 9 | 18.7 ± 7.1 |
| Coefficient of variation | 0.09 | 0.06 | 0.08 | 0.16 | 0.11 | 0.04 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | 0.55 | 0.30 | -0.65 | -0.37 | - |
| Pearson p-value (two tailed) |
2.63E-01 | 2.63E-01 | 2.53E-01 | 5.66E-01 | 1.59E-01 | 4.72E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.0 - 43.8% | 56.2 - 59.0% | 223 - 242 | 159 - 173 | 185 - 199 | 328 - 351 | 11.7 - 32.3 |
| Median | 43.2% | 56.9% | 236 | 167 | 193 | 344 | 19.0 |
| Average ± stdev | 42.9 ± 1.0% | 57.1 ± 1.0% | 233 ± 5 | 165 ± 4 | 191 ± 5 | 341 ± 7 | 18.7 ± 7.1 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.52 | -0.52 | 0.41 | 0.47 | -0.42 | -0.33 | - |
| Pearson p-value (two tailed) |
2.85E-01 | 2.85E-01 | 4.20E-01 | 3.42E-01 | 4.12E-01 | 5.18E-01 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.0 - 43.1% | 56.9 - 62.0% | 328 - 390 | 230 - 249 | 289 - 349 | 530 - 563 | 11.7 - 32.3 |
| Median | 42.2% | 58.1% | 383 | 245 | 310 | 558 | 19.0 |
| Average ± stdev | 41.4 ± 1.9% | 58.6 ± 2.0% | 369 ± 22 | 242 ± 6 | 315 ± 20 | 550 ± 12 | 18.7 ± 7.1 |
| Coefficient of variation | 0.05 | 0.03 | 0.06 | 0.03 | 0.07 | 0.02 | 0.38 |
| Pearson correlation coefficient with log10MLS |
0.47 | -0.46 | 0.47 | 0.51 | -0.49 | 0.03 | - |
| Pearson p-value (two tailed) |
3.52E-01 | 3.54E-01 | 3.46E-01 | 3.00E-01 | 3.23E-01 | 9.49E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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