Stats for family Centrarchidae

Species in family:
Lepomis cyanellus
Lepomis macrochirus
Micropterus dolomieu
Micropterus salmoides
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Stats for total mtDNA (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 46.5 53.5 4880 2789 4398 4417 23.0
Micropterus dolomieu 46.7 53.3 4873 2830 4400 4385 26.0
Lepomis cyanellus 46.3 53.7 4932 2704 4321 4528 9.0
Lepomis macrochirus 46.9 53.1 4983 2753 4228 4525 10.0
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Stats for total protein-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.2 52.8 3621 1766 3172 2852 23.0
Micropterus dolomieu 47.2 52.8 3604 1785 3183 2836 26.0
Lepomis cyanellus 46.7 53.3 3654 1675 3118 2960 9.0
Lepomis macrochirus 47.7 52.3 3708 1734 3041 2924 10.0
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Stats for D-loop (group size: 1 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus dolomieu 39.5 60.5 181 146 256 244 26.0
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Stats for total tRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 45.6 54.4 392 315 380 464 23.0
Micropterus dolomieu 46.0 54.0 393 320 375 463 26.0
Lepomis cyanellus 45.9 54.1 405 306 363 474 9.0
Lepomis macrochirus 46.2 53.8 402 314 359 475 10.0
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Stats for total rRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 46.3 53.7 663 557 570 846 23.0
Micropterus dolomieu 46.8 53.2 669 565 574 830 26.0
Lepomis cyanellus 46.9 53.1 666 570 565 835 9.0
Lepomis macrochirus 46.1 53.9 663 554 565 857 10.0
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Stats for ATP6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 45.5 54.5 220 91 208 165 23.0
Micropterus dolomieu 47.1 52.9 223 99 203 158 26.0
Lepomis cyanellus 47.4 52.6 232 92 195 165 9.0
Lepomis macrochirus 48.8 51.2 244 90 183 167 10.0
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Stats for ATP8 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.0 53.0 60 19 42 47 23.0
Micropterus dolomieu 47.6 52.4 60 20 42 46 26.0
Lepomis cyanellus 45.2 54.8 59 17 42 50 9.0
Lepomis macrochirus 46.4 53.6 59 19 42 48 10.0
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Stats for COX1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.1 52.9 442 289 462 358 23.0
Micropterus dolomieu 46.4 53.6 438 282 468 363 26.0
Lepomis cyanellus 46.8 53.2 444 282 457 368 9.0
Lepomis macrochirus 47.5 52.5 445 292 454 360 10.0
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Stats for COX2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 45.3 54.7 196 117 187 191 23.0
Micropterus dolomieu 44.4 55.6 197 110 186 198 26.0
Lepomis cyanellus 45.3 54.7 202 111 182 196 9.0
Lepomis macrochirus 45.0 55.0 199 112 182 198 10.0
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Stats for COX3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.7 52.3 235 140 226 185 23.0
Micropterus dolomieu 49.7 50.3 250 140 210 185 26.0
Lepomis cyanellus 46.2 53.8 235 128 219 203 9.0
Lepomis macrochirus 47.3 52.7 238 133 217 197 10.0
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Stats for CYTB (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 49.1 50.9 376 184 328 253 23.0
Micropterus dolomieu 49.6 50.4 378 188 324 251 26.0
Lepomis cyanellus 47.7 52.3 373 171 327 270 9.0
Lepomis macrochirus 48.4 51.6 372 180 314 275 10.0
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Stats for ND1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 46.3 53.7 306 145 279 245 23.0
Micropterus dolomieu 46.1 53.9 299 150 287 239 26.0
Lepomis cyanellus 46.1 53.9 305 144 277 249 9.0
Lepomis macrochirus 46.8 53.2 311 145 279 240 10.0
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Stats for ND2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.8 52.2 367 133 273 274 23.0
Micropterus dolomieu 48.3 51.7 367 139 276 265 26.0
Lepomis cyanellus 45.8 54.2 356 123 283 284 9.0
Lepomis macrochirus 48.9 51.1 382 130 265 269 10.0
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Stats for ND3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 50.4 49.6 115 62 100 74 23.0
Micropterus dolomieu 48.4 51.6 113 56 105 75 26.0
Lepomis cyanellus 49.6 50.4 121 52 94 82 9.0
Lepomis macrochirus 48.1 51.9 116 52 97 84 10.0
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Stats for ND4 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.6 52.4 447 211 387 336 23.0
Micropterus dolomieu 47.9 52.1 443 218 389 331 26.0
Lepomis cyanellus 47.9 52.1 461 200 385 335 9.0
Lepomis macrochirus 49.6 50.4 472 213 363 333 10.0
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Stats for ND4L (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 49.8 50.2 103 45 87 62 23.0
Micropterus dolomieu 49.5 50.5 102 45 88 62 26.0
Lepomis cyanellus 48.1 51.9 101 42 82 72 9.0
Lepomis macrochirus 51.2 48.8 108 44 76 69 10.0
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Stats for ND5 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 45.8 54.2 580 262 516 481 23.0
Micropterus dolomieu 44.5 55.5 557 261 532 489 26.0
Lepomis cyanellus 45.0 55.0 583 245 505 506 9.0
Lepomis macrochirus 46.3 53.7 593 259 490 497 10.0
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Stats for ND6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.3 52.7 177 70 83 192 23.0
Micropterus dolomieu 49.6 50.4 180 79 79 184 26.0
Lepomis cyanellus 49.0 51.0 185 71 76 190 9.0
Lepomis macrochirus 45.8 54.2 172 67 85 198 10.0
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Stats for 12S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 47.1 52.9 242 204 204 297 23.0
Micropterus dolomieu 47.8 52.2 246 207 200 294 26.0
Lepomis cyanellus 46.9 53.1 238 207 205 298 9.0
Lepomis macrochirus 47.2 52.8 241 206 204 296 10.0
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Stats for 16S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Micropterus salmoides 45.8 54.2 421 353 366 549 23.0
Micropterus dolomieu 46.2 53.8 423 358 374 536 26.0
Lepomis cyanellus 46.9 53.1 428 363 360 537 9.0
Lepomis macrochirus 45.5 54.5 422 348 361 561 10.0
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.