Stats for order Chimaeriformes
Browsing families:
| Stats for total mtDNA (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 33.7 | 66.2 | 3492 | 2159 | 5685 | 5419 | 6.0 |
| Chimaera monstrosa | 38.6 | 61.4 | 4638 | 2527 | 5543 | 5872 | 29.4 |
| Callorhinchus capensis | 34.1 | 65.9 | 3545 | 2162 | 5631 | 5422 | 12.0 |
| Stats for total protein-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 32.6 | 67.3 | 2418 | 1292 | 4118 | 3533 | 6.0 |
| Chimaera monstrosa | 38.6 | 61.4 | 2957 | 1441 | 3607 | 3393 | 29.4 |
| Callorhinchus capensis | 33.2 | 66.8 | 2475 | 1296 | 4066 | 3537 | 12.0 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 33.4 | 66.6 | 293 | 219 | 465 | 558 | 6.0 |
| Chimaera monstrosa | 36.5 | 63.5 | 321 | 240 | 436 | 538 | 29.4 |
| Callorhinchus capensis | 33.2 | 66.8 | 290 | 220 | 466 | 559 | 12.0 |
| Stats for total rRNA-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 38.6 | 61.4 | 535 | 457 | 662 | 913 | 6.0 |
| Chimaera monstrosa | 38.8 | 61.2 | 548 | 465 | 655 | 946 | 29.4 |
| Callorhinchus capensis | 38.3 | 61.7 | 539 | 460 | 678 | 928 | 12.0 |
| Stats for ATP6 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 31.4 | 68.6 | 154 | 61 | 251 | 218 | 6.0 |
| Chimaera monstrosa | 37.1 | 62.9 | 183 | 71 | 233 | 197 | 29.4 |
| Callorhinchus capensis | 31.9 | 68.1 | 155 | 63 | 250 | 216 | 12.0 |
| Stats for ATP8 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 23.6 | 76.4 | 32 | 7 | 62 | 64 | 6.0 |
| Chimaera monstrosa | 31.5 | 68.5 | 44 | 9 | 53 | 62 | 29.4 |
| Callorhinchus capensis | 24.2 | 75.8 | 34 | 6 | 60 | 65 | 12.0 |
| Stats for COX1 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 35.4 | 64.6 | 321 | 232 | 582 | 425 | 6.0 |
| Chimaera monstrosa | 40.7 | 59.3 | 376 | 259 | 516 | 409 | 29.4 |
| Callorhinchus capensis | 36.3 | 63.7 | 334 | 232 | 568 | 426 | 12.0 |
| Stats for COX2 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 34.6 | 63.5 | 146 | 93 | 224 | 215 | 6.0 |
| Chimaera monstrosa | 41.0 | 59.0 | 187 | 96 | 193 | 215 | 29.4 |
| Callorhinchus capensis | 35.7 | 64.3 | 149 | 98 | 228 | 216 | 12.0 |
| Stats for COX3 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 35.6 | 64.4 | 164 | 116 | 283 | 223 | 6.0 |
| Chimaera monstrosa | 42.1 | 57.9 | 209 | 122 | 237 | 218 | 29.4 |
| Callorhinchus capensis | 36.0 | 64.0 | 166 | 117 | 281 | 222 | 12.0 |
| Stats for CYTB (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 33.9 | 66.1 | 246 | 140 | 436 | 318 | 6.0 |
| Chimaera monstrosa | 40.6 | 59.4 | 314 | 150 | 369 | 311 | 29.4 |
| Callorhinchus capensis | 34.2 | 65.8 | 251 | 139 | 430 | 320 | 12.0 |
| Stats for ND1 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 34.3 | 65.7 | 217 | 112 | 354 | 277 | 6.0 |
| Chimaera monstrosa | 39.6 | 60.4 | 259 | 126 | 316 | 271 | 29.4 |
| Callorhinchus capensis | 34.8 | 65.2 | 223 | 111 | 348 | 278 | 12.0 |
| Stats for ND2 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 31.5 | 68.5 | 235 | 93 | 364 | 350 | 6.0 |
| Chimaera monstrosa | 37.8 | 62.2 | 293 | 102 | 298 | 351 | 29.4 |
| Callorhinchus capensis | 31.7 | 68.3 | 239 | 91 | 359 | 353 | 12.0 |
| Stats for ND3 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 33.2 | 66.8 | 74 | 42 | 144 | 89 | 6.0 |
| Chimaera monstrosa | 40.4 | 59.6 | 90 | 51 | 125 | 83 | 29.4 |
| Callorhinchus capensis | 32.7 | 67.3 | 72 | 42 | 146 | 89 | 12.0 |
| Stats for ND4 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 32.0 | 68.0 | 296 | 144 | 494 | 442 | 6.0 |
| Chimaera monstrosa | 36.6 | 63.4 | 339 | 164 | 471 | 401 | 29.4 |
| Callorhinchus capensis | 33.0 | 67.0 | 308 | 146 | 483 | 439 | 12.0 |
| Stats for ND4L (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 33.3 | 66.7 | 65 | 34 | 112 | 86 | 6.0 |
| Chimaera monstrosa | 39.1 | 60.9 | 80 | 36 | 101 | 80 | 29.4 |
| Callorhinchus capensis | 33.7 | 66.3 | 66 | 34 | 111 | 86 | 12.0 |
| Stats for ND5 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 29.1 | 70.9 | 354 | 176 | 692 | 602 | 6.0 |
| Chimaera monstrosa | 35.2 | 64.8 | 446 | 202 | 608 | 583 | 29.4 |
| Callorhinchus capensis | 29.2 | 70.8 | 360 | 173 | 686 | 605 | 12.0 |
| Stats for ND6 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 30.5 | 69.5 | 115 | 44 | 128 | 235 | 6.0 |
| Chimaera monstrosa | 37.9 | 62.1 | 142 | 56 | 97 | 227 | 29.4 |
| Callorhinchus capensis | 31.6 | 68.4 | 119 | 46 | 124 | 233 | 12.0 |
| Stats for 12S rRNA gene (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 42.4 | 57.6 | 223 | 177 | 236 | 307 | 6.0 |
| Chimaera monstrosa | 42.1 | 57.9 | 225 | 175 | 218 | 331 | 29.4 |
| Callorhinchus capensis | 42.2 | 57.8 | 222 | 180 | 241 | 309 | 12.0 |
| Stats for 16S rRNA gene (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Callorhinchus milii | 36.5 | 63.5 | 312 | 280 | 426 | 606 | 6.0 |
| Chimaera monstrosa | 36.8 | 63.2 | 323 | 290 | 437 | 615 | 29.4 |
| Callorhinchus capensis | 36.1 | 63.9 | 317 | 280 | 437 | 619 | 12.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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