Stats for family Callorhinchidae

Species in family:
Callorhinchus capensis
Callorhinchus milii
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Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 33.7 66.2 3492 2159 5685 5419 6.0
Callorhinchus capensis 34.1 65.9 3545 2162 5631 5422 12.0
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Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 32.6 67.3 2418 1292 4118 3533 6.0
Callorhinchus capensis 33.2 66.8 2475 1296 4066 3537 12.0
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Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
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Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 33.4 66.6 293 219 465 558 6.0
Callorhinchus capensis 33.2 66.8 290 220 466 559 12.0
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Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 38.6 61.4 535 457 662 913 6.0
Callorhinchus capensis 38.3 61.7 539 460 678 928 12.0
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Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 31.4 68.6 154 61 251 218 6.0
Callorhinchus capensis 31.9 68.1 155 63 250 216 12.0
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Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 23.6 76.4 32 7 62 64 6.0
Callorhinchus capensis 24.2 75.8 34 6 60 65 12.0
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Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 35.4 64.6 321 232 582 425 6.0
Callorhinchus capensis 36.3 63.7 334 232 568 426 12.0
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Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 34.6 63.5 146 93 224 215 6.0
Callorhinchus capensis 35.7 64.3 149 98 228 216 12.0
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Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 35.6 64.4 164 116 283 223 6.0
Callorhinchus capensis 36.0 64.0 166 117 281 222 12.0
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Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 33.9 66.1 246 140 436 318 6.0
Callorhinchus capensis 34.2 65.8 251 139 430 320 12.0
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Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 34.3 65.7 217 112 354 277 6.0
Callorhinchus capensis 34.8 65.2 223 111 348 278 12.0
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Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 31.5 68.5 235 93 364 350 6.0
Callorhinchus capensis 31.7 68.3 239 91 359 353 12.0
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Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 33.2 66.8 74 42 144 89 6.0
Callorhinchus capensis 32.7 67.3 72 42 146 89 12.0
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Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 32.0 68.0 296 144 494 442 6.0
Callorhinchus capensis 33.0 67.0 308 146 483 439 12.0
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Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 33.3 66.7 65 34 112 86 6.0
Callorhinchus capensis 33.7 66.3 66 34 111 86 12.0
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Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 29.1 70.9 354 176 692 602 6.0
Callorhinchus capensis 29.2 70.8 360 173 686 605 12.0
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Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 30.5 69.5 115 44 128 235 6.0
Callorhinchus capensis 31.6 68.4 119 46 124 233 12.0
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Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 42.4 57.6 223 177 236 307 6.0
Callorhinchus capensis 42.2 57.8 222 180 241 309 12.0
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Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Callorhinchus milii 36.5 63.5 312 280 426 606 6.0
Callorhinchus capensis 36.1 63.9 317 280 437 619 12.0
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.