Stats for order Charadriiformes

Browsing families:
Charadriidae (1)
Laridae (1)
Recurvirostridae (1)
Scolopacidae (2)
Stercorariidae (1)
Species in group (6):
Arenaria interpres
Chroicocephalus ridibundus
Recurvirostra avosetta
Scolopax rusticola
Stercorarius maccormicki
Vanellus vanellus
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Stats for total mtDNA (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.2 - 45.2% 54.8 - 56.8% 5070 - 5260 2265 - 2380 3986 - 4249 5124 - 5400 15.5 - 32.9
Median 44.7% 55.3% 5167 2311 4066 5281 24.5
Average ± stdev 44.5 ± 0.7% 55.5 ± 0.7% 5166 ± 61 2313 ± 35 4083 ± 86 5250 ± 104 24.4 ± 5.3
Coefficient of variation 0.02 0.01 0.01 0.02 0.02 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.95 -0.95 0.89 0.76 -0.91 -0.42 -
Pearson p-value
(two tailed)		 4.40E-03 4.40E-03 1.60E-02 7.78E-02 1.30E-02 4.08E-01 -
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Stats for total protein-coding genes (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.8 - 45.8% 54.2 - 56.2% 3626 - 3809 1348 - 1438 2668 - 2867 3413 - 3552 15.5 - 32.9
Median 45.1% 55.1% 3740 1387 2807 3519 24.5
Average ± stdev 45.0 ± 0.7% 55.0 ± 0.7% 3730 ± 56 1386 ± 32 2775 ± 68 3483 ± 54 24.4 ± 5.3
Coefficient of variation 0.01 0.01 0.02 0.02 0.02 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.98 -0.98 0.92 0.45 -0.78 -0.25 -
Pearson p-value
(two tailed)		 6.75E-04 6.75E-04 9.50E-03 3.67E-01 6.75E-02 6.39E-01 -
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Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
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Stats for total tRNA-coding genes (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.4 - 42.7% 57.3 - 58.6% 379 - 398 260 - 267 385 - 400 501 - 511 15.5 - 32.9
Median 42.0% 58.2% 387 263 399 509 24.5
Average ± stdev 41.9 ± 0.5% 58.1 ± 0.5% 387 ± 6 262 ± 2 394 ± 5 506 ± 3 24.4 ± 5.3
Coefficient of variation 0.01 0.01 0.02 0.01 0.01 0.01 0.22
Pearson correlation
coefficient with log10MLS		 0.55 -0.55 0.25 0.61 -0.51 -0.55 -
Pearson p-value
(two tailed)		 2.59E-01 2.59E-01 6.37E-01 1.95E-01 2.98E-01 2.55E-01 -
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Stats for total rRNA-coding genes (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.3 - 47.0% 53.0 - 56.7% 632 - 710 483 - 510 530 - 571 826 - 891 15.5 - 32.9
Median 45.8% 54.4% 689 492 544 858 24.5
Average ± stdev 45.5 ± 1.4% 54.5 ± 1.4% 677 ± 25 493 ± 9 548 ± 16 854 ± 20 24.4 ± 5.3
Coefficient of variation 0.03 0.02 0.04 0.02 0.03 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.81 -0.81 0.69 0.72 -0.64 -0.82 -
Pearson p-value
(two tailed)		 5.19E-02 5.19E-02 1.31E-01 1.08E-01 1.75E-01 4.81E-02 -
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Stats for ATP6 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.6 - 47.7% 52.3 - 55.4% 240 - 257 63 - 71 160 - 185 188 - 206 15.5 - 32.9
Median 45.5% 54.8% 245 67 178 201 24.5
Average ± stdev 45.6 ± 1.1% 54.4 ± 1.1% 245 ± 5 66 ± 2 172 ± 8 199 ± 5 24.4 ± 5.3
Coefficient of variation 0.02 0.02 0.02 0.04 0.05 0.03 0.22
Pearson correlation
coefficient with log10MLS		 0.75 -0.75 0.76 0.35 -0.72 0.17 -
Pearson p-value
(two tailed)		 8.45E-02 8.45E-02 8.15E-02 5.03E-01 1.05E-01 7.49E-01 -
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Stats for ATP8 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.7 - 44.0% 56.0 - 58.3% 60 - 65 9 - 11 33 - 43 54 - 62 15.5 - 32.9
Median 42.3% 57.7% 61 10 39 60 24.5
Average ± stdev 42.5 ± 0.8% 57.5 ± 0.8% 61 ± 1 10 ± 0 38 ± 3 58 ± 2 24.4 ± 5.3
Coefficient of variation 0.02 0.01 0.03 0.08 0.08 0.04 0.22
Pearson correlation
coefficient with log10MLS		 0.30 -0.30 -0.06 0.55 -0.28 0.17 -
Pearson p-value
(two tailed)		 5.67E-01 5.67E-01 9.03E-01 2.53E-01 5.96E-01 7.50E-01 -
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Stats for COX1 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.2 - 46.9% 53.1 - 54.8% 452 - 484 244 - 252 387 - 418 421 - 436 15.5 - 32.9
Median 46.6% 53.4% 473 250 401 432 24.5
Average ± stdev 46.4 ± 0.6% 53.6 ± 0.6% 469 ± 9 249 ± 2 402 ± 10 429 ± 4 24.4 ± 5.3
Coefficient of variation 0.01 0.01 0.02 0.01 0.03 0.01 0.22
Pearson correlation
coefficient with log10MLS		 0.88 -0.88 0.83 -0.17 -0.71 -0.05 -
Pearson p-value
(two tailed)		 2.08E-02 2.08E-02 3.86E-02 7.47E-01 1.13E-01 9.23E-01 -
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Stats for COX2 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.0 - 46.6% 53.4 - 57.0% 194 - 216 95 - 104 162 - 177 201 - 217 15.5 - 32.9
Median 44.6% 55.4% 209 100 170 213 24.5
Average ± stdev 44.7 ± 1.2% 55.3 ± 1.2% 206 ± 6 99 ± 3 168 ± 4 209 ± 5 24.4 ± 5.3
Coefficient of variation 0.03 0.02 0.03 0.04 0.03 0.03 0.22
Pearson correlation
coefficient with log10MLS		 0.84 -0.84 0.98 -0.03 -0.91 -0.32 -
Pearson p-value
(two tailed)		 3.58E-02 3.58E-02 7.98E-04 9.61E-01 1.15E-02 5.31E-01 -
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Stats for COX3 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.3 - 46.8% 53.2 - 55.7% 224 - 249 116 - 130 185 - 211 219 - 232 15.5 - 32.9
Median 46.6% 53.6% 240 123 200 226 24.5
Average ± stdev 46.0 ± 1.0% 54.0 ± 1.0% 238 ± 8 122 ± 4 197 ± 7 225 ± 5 24.4 ± 5.3
Coefficient of variation 0.02 0.02 0.03 0.04 0.04 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.80 -0.80 0.58 0.19 -0.67 -0.10 -
Pearson p-value
(two tailed)		 5.35E-02 5.35E-02 2.26E-01 7.20E-01 1.47E-01 8.56E-01 -
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Stats for CYTB (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.1 - 46.6% 53.4 - 54.9% 380 - 393 136 - 145 278 - 287 325 - 340 15.5 - 32.9
Median 46.5% 54.0% 386 142 286 332 24.5
Average ± stdev 46.1 ± 0.6% 53.9 ± 0.6% 386 ± 4 141 ± 2 283 ± 3 332 ± 4 24.4 ± 5.3
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.01 0.22
Pearson correlation
coefficient with log10MLS		 0.53 -0.53 0.41 0.51 -0.36 -0.41 -
Pearson p-value
(two tailed)		 2.80E-01 2.80E-01 4.23E-01 3.03E-01 4.84E-01 4.16E-01 -
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Stats for ND1 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.1 - 46.3% 53.7 - 55.9% 307 - 321 121 - 138 259 - 274 257 - 286 15.5 - 32.9
Median 45.4% 55.3% 312 130 272 268 24.5
Average ± stdev 45.0 ± 0.9% 55.0 ± 0.9% 311 ± 4 128 ± 6 268 ± 5 269 ± 11 24.4 ± 5.3
Coefficient of variation 0.02 0.02 0.02 0.05 0.02 0.04 0.22
Pearson correlation
coefficient with log10MLS		 0.12 -0.12 -0.38 0.41 -0.48 0.15 -
Pearson p-value
(two tailed)		 8.19E-01 8.19E-01 4.52E-01 4.16E-01 3.35E-01 7.79E-01 -
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Stats for ND2 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.0 - 43.8% 56.2 - 59.0% 332 - 347 93 - 111 249 - 266 331 - 350 15.5 - 32.9
Median 42.3% 58.1% 336 100 263 344 24.5
Average ± stdev 42.2 ± 1.0% 57.8 ± 1.0% 338 ± 5 100 ± 6 259 ± 7 341 ± 6 24.4 ± 5.3
Coefficient of variation 0.02 0.02 0.02 0.07 0.03 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.83 -0.83 0.82 0.46 -0.81 -0.26 -
Pearson p-value
(two tailed)		 4.27E-02 4.27E-02 4.53E-02 3.55E-01 5.01E-02 6.15E-01 -
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Stats for ND3 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.0 - 46.3% 53.7 - 57.0% 110 - 120 40 - 43 87 - 96 94 - 105 15.5 - 32.9
Median 45.5% 55.6% 115 42 94 103 24.5
Average ± stdev 44.8 ± 1.2% 55.2 ± 1.2% 115 ± 3 41 ± 1 92 ± 3 101 ± 3 24.4 ± 5.3
Coefficient of variation 0.03 0.02 0.03 0.03 0.04 0.04 0.22
Pearson correlation
coefficient with log10MLS		 0.74 -0.74 0.51 0.58 -0.26 -0.72 -
Pearson p-value
(two tailed)		 9.14E-02 9.14E-02 3.04E-01 2.31E-01 6.25E-01 1.10E-01 -
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Stats for ND4 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.3 - 45.9% 54.1 - 56.7% 460 - 489 130 - 144 312 - 345 424 - 447 15.5 - 32.9
Median 45.2% 55.7% 480 136 329 437 24.5
Average ± stdev 44.6 ± 1.0% 55.4 ± 1.0% 477 ± 9 137 ± 4 329 ± 11 433 ± 9 24.4 ± 5.3
Coefficient of variation 0.02 0.02 0.02 0.04 0.04 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.80 -0.80 0.90 0.24 -0.77 -0.12 -
Pearson p-value
(two tailed)		 5.56E-02 5.56E-02 1.33E-02 6.44E-01 7.44E-02 8.26E-01 -
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Stats for ND4L (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.1 - 47.8% 52.2 - 56.9% 89 - 103 38 - 43 69 - 83 76 - 90 15.5 - 32.9
Median 46.5% 54.5% 96 42 75 88 24.5
Average ± stdev 45.6 ± 1.7% 54.4 ± 1.7% 95 ± 4 40 ± 1 75 ± 4 85 ± 4 24.4 ± 5.3
Coefficient of variation 0.04 0.03 0.05 0.05 0.06 0.05 0.22
Pearson correlation
coefficient with log10MLS		 0.64 -0.64 0.48 0.35 -0.57 -0.06 -
Pearson p-value
(two tailed)		 1.70E-01 1.70E-01 3.30E-01 5.02E-01 2.35E-01 9.12E-01 -
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Stats for ND5 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.4 - 44.6% 55.4 - 56.6% 584 - 616 193 - 208 412 - 443 572 - 603 15.5 - 32.9
Median 44.4% 55.7% 600 204 434 592 24.5
Average ± stdev 44.1 ± 0.5% 55.9 ± 0.5% 598 ± 11 202 ± 4 426 ± 11 586 ± 11 24.4 ± 5.3
Coefficient of variation 0.01 0.01 0.02 0.02 0.03 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.89 -0.89 0.75 -0.01 0.08 -0.64 -
Pearson p-value
(two tailed)		 1.86E-02 1.86E-02 8.51E-02 9.81E-01 8.83E-01 1.71E-01 -
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Stats for ND6 (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.9 - 47.1% 52.9 - 57.1% 180 - 195 44 - 55 57 - 81 215 - 221 15.5 - 32.9
Median 46.4% 54.2% 190 51 64 220 24.5
Average ± stdev 45.5 ± 1.6% 54.5 ± 1.6% 188 ± 4 49 ± 3 65 ± 8 218 ± 2 24.4 ± 5.3
Coefficient of variation 0.04 0.03 0.03 0.07 0.12 0.01 0.22
Pearson correlation
coefficient with log10MLS		 0.80 -0.80 0.65 0.87 -0.91 0.48 -
Pearson p-value
(two tailed)		 5.62E-02 5.62E-02 1.64E-01 2.29E-02 1.30E-02 3.35E-01 -
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Stats for 12S rRNA gene (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.1 - 50.1% 49.9 - 54.9% 248 - 279 190 - 212 191 - 214 293 - 323 15.5 - 32.9
Median 47.8% 52.7% 267 197 207 304 24.5
Average ± stdev 47.8 ± 1.8% 52.2 ± 1.8% 265 ± 9 199 ± 7 203 ± 7 304 ± 9 24.4 ± 5.3
Coefficient of variation 0.04 0.03 0.04 0.04 0.04 0.03 0.22
Pearson correlation
coefficient with log10MLS		 0.73 -0.73 0.71 0.35 -0.85 -0.73 -
Pearson p-value
(two tailed)		 1.02E-01 1.02E-01 1.11E-01 4.97E-01 3.35E-02 1.02E-01 -
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Stats for 16S rRNA gene (group size: 6 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.1 - 45.1% 54.9 - 57.9% 384 - 431 289 - 305 329 - 360 528 - 568 15.5 - 32.9
Median 45.0% 55.8% 418 295 353 554 24.5
Average ± stdev 44.1 ± 1.2% 55.9 ± 1.2% 411 ± 16 294 ± 5 344 ± 12 549 ± 12 24.4 ± 5.3
Coefficient of variation 0.03 0.02 0.04 0.02 0.04 0.02 0.22
Pearson correlation
coefficient with log10MLS		 0.81 -0.81 0.65 0.83 -0.31 -0.82 -
Pearson p-value
(two tailed)		 5.26E-02 5.26E-02 1.65E-01 4.21E-02 5.53E-01 4.58E-02 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.