Stats for family Scolopacidae

Species in family:
Arenaria interpres
Scolopax rusticola
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Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 44.7 55.3 5138 2331 4132 5124 22.3
Scolopax rusticola 43.2 56.8 5070 2265 4249 5400 15.5
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Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 45.1 54.9 3709 1419 2838 3413 22.3
Scolopax rusticola 43.8 56.2 3626 1358 2867 3519 15.5
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Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
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Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 42.0 58.0 393 262 400 505 22.3
Scolopax rusticola 41.4 58.6 382 260 399 510 15.5
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Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 44.7 55.3 660 487 570 848 22.3
Scolopax rusticola 43.3 56.7 632 483 571 891 15.5
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Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 45.5 54.5 245 66 185 188 22.3
Scolopax rusticola 44.9 55.1 240 67 178 199 15.5
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Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 42.3 57.7 61 10 43 54 22.3
Scolopax rusticola 41.7 58.3 61 9 40 58 15.5
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Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 46.2 53.8 465 252 413 421 22.3
Scolopax rusticola 45.2 54.8 452 249 418 432 15.5
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Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 45.3 54.7 206 104 170 204 22.3
Scolopax rusticola 43.0 57.0 194 100 177 213 15.5
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Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 46.6 53.4 239 126 200 219 22.3
Scolopax rusticola 44.3 55.7 224 123 211 226 15.5
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Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 46.6 53.4 390 143 279 331 22.3
Scolopax rusticola 45.1 54.9 380 136 287 340 15.5
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Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 44.7 55.3 307 130 273 268 22.3
Scolopax rusticola 45.4 54.6 321 123 272 262 15.5
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Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 42.7 57.3 336 108 266 331 22.3
Scolopax rusticola 41.0 59.0 332 94 266 347 15.5
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Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 45.7 54.3 119 42 88 103 22.3
Scolopax rusticola 43.0 57.0 110 41 95 105 15.5
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Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 45.2 54.8 480 143 329 426 22.3
Scolopax rusticola 43.3 56.7 460 136 345 437 15.5
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Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 46.5 53.5 96 42 83 76 22.3
Scolopax rusticola 43.1 56.9 89 39 80 89 15.5
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Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 43.6 56.4 584 208 443 580 22.3
Scolopax rusticola 43.4 56.6 586 199 421 603 15.5
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Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 44.3 55.7 184 47 70 221 22.3
Scolopax rusticola 42.9 57.1 180 44 81 217 15.5
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Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 47.3 52.7 263 196 210 301 22.3
Scolopax rusticola 45.1 54.9 248 194 214 323 15.5
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Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Arenaria interpres 43.1 56.9 397 291 360 547 22.3
Scolopax rusticola 42.1 57.9 384 289 357 568 15.5
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.