Stats for family Leporidae
Stats for total mtDNA (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
38.7 |
61.3 |
4510 |
2358 |
5283 |
5583 |
10.7 |
Lepus timidus |
38.5 |
61.3 |
4533 |
2297 |
5246 |
5635 |
18.0 |
Oryctolagus cuniculus |
40.2 |
59.8 |
4584 |
2350 |
4882 |
5429 |
9.0 |
Stats for total protein-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
38.6 |
61.4 |
2994 |
1384 |
3521 |
3437 |
10.7 |
Lepus timidus |
38.6 |
61.4 |
3008 |
1367 |
3498 |
3465 |
18.0 |
Oryctolagus cuniculus |
40.5 |
59.5 |
3191 |
1400 |
3325 |
3420 |
9.0 |
Stats for D-loop (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
40.0 |
60.0 |
647 |
270 |
672 |
706 |
10.7 |
Lepus timidus |
38.2 |
59.9 |
648 |
234 |
667 |
715 |
18.0 |
Oryctolagus cuniculus |
41.1 |
58.9 |
512 |
228 |
485 |
575 |
9.0 |
Stats for total tRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
37.3 |
62.7 |
315 |
244 |
434 |
507 |
10.7 |
Lepus timidus |
36.8 |
63.2 |
319 |
237 |
435 |
520 |
18.0 |
Oryctolagus cuniculus |
39.1 |
60.9 |
331 |
256 |
423 |
492 |
9.0 |
Stats for total rRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
39.0 |
61.0 |
536 |
452 |
638 |
909 |
10.7 |
Lepus timidus |
39.0 |
61.0 |
539 |
448 |
632 |
914 |
18.0 |
Oryctolagus cuniculus |
39.0 |
61.0 |
533 |
455 |
631 |
917 |
9.0 |
Stats for ATP6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
38.6 |
61.4 |
187 |
76 |
205 |
213 |
10.7 |
Lepus timidus |
40.2 |
59.8 |
195 |
79 |
200 |
207 |
18.0 |
Oryctolagus cuniculus |
40.9 |
59.1 |
201 |
77 |
202 |
200 |
9.0 |
Stats for ATP8 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
33.3 |
66.7 |
55 |
13 |
63 |
73 |
10.7 |
Lepus timidus |
35.8 |
64.2 |
60 |
13 |
57 |
74 |
18.0 |
Oryctolagus cuniculus |
37.3 |
62.7 |
60 |
16 |
58 |
70 |
9.0 |
Stats for COX1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
40.9 |
59.1 |
368 |
262 |
496 |
416 |
10.7 |
Lepus timidus |
40.3 |
59.7 |
360 |
261 |
499 |
422 |
18.0 |
Oryctolagus cuniculus |
42.6 |
57.4 |
389 |
268 |
478 |
407 |
9.0 |
Stats for COX2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
39.5 |
60.5 |
172 |
98 |
213 |
201 |
10.7 |
Lepus timidus |
39.5 |
60.5 |
172 |
98 |
214 |
200 |
18.0 |
Oryctolagus cuniculus |
40.9 |
59.1 |
182 |
98 |
196 |
208 |
9.0 |
Stats for COX3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
41.3 |
58.7 |
205 |
119 |
248 |
212 |
10.7 |
Lepus timidus |
41.2 |
58.8 |
208 |
115 |
244 |
217 |
18.0 |
Oryctolagus cuniculus |
44.0 |
56.0 |
225 |
120 |
226 |
213 |
9.0 |
Stats for CYTB (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
41.9 |
58.1 |
331 |
147 |
346 |
316 |
10.7 |
Lepus timidus |
41.6 |
58.4 |
330 |
144 |
345 |
321 |
18.0 |
Oryctolagus cuniculus |
43.0 |
57.0 |
346 |
144 |
330 |
319 |
9.0 |
Stats for ND1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
40.0 |
60.0 |
268 |
115 |
291 |
283 |
10.7 |
Lepus timidus |
39.4 |
60.6 |
265 |
111 |
293 |
286 |
18.0 |
Oryctolagus cuniculus |
42.4 |
57.6 |
288 |
117 |
276 |
274 |
9.0 |
Stats for ND2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
35.3 |
64.7 |
272 |
97 |
312 |
363 |
10.7 |
Lepus timidus |
34.1 |
65.9 |
265 |
91 |
315 |
373 |
18.0 |
Oryctolagus cuniculus |
36.8 |
63.2 |
289 |
95 |
295 |
365 |
9.0 |
Stats for ND3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
38.2 |
61.8 |
87 |
45 |
110 |
104 |
10.7 |
Lepus timidus |
37.2 |
62.8 |
83 |
46 |
115 |
103 |
18.0 |
Oryctolagus cuniculus |
36.0 |
64.0 |
85 |
40 |
114 |
108 |
9.0 |
Stats for ND4 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
37.2 |
62.8 |
366 |
145 |
438 |
426 |
10.7 |
Lepus timidus |
37.5 |
62.5 |
376 |
141 |
432 |
429 |
18.0 |
Oryctolagus cuniculus |
40.5 |
59.5 |
401 |
157 |
405 |
415 |
9.0 |
Stats for ND4L (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
34.3 |
65.7 |
65 |
37 |
115 |
80 |
10.7 |
Lepus timidus |
36.0 |
64.0 |
67 |
40 |
113 |
77 |
18.0 |
Oryctolagus cuniculus |
36.0 |
64.0 |
76 |
31 |
102 |
88 |
9.0 |
Stats for ND5 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
37.0 |
63.0 |
475 |
196 |
582 |
559 |
10.7 |
Lepus timidus |
37.5 |
62.5 |
485 |
195 |
568 |
564 |
18.0 |
Oryctolagus cuniculus |
38.5 |
61.5 |
490 |
208 |
555 |
559 |
9.0 |
Stats for ND6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
36.8 |
63.2 |
156 |
37 |
119 |
213 |
10.7 |
Lepus timidus |
36.4 |
63.6 |
155 |
36 |
120 |
214 |
18.0 |
Oryctolagus cuniculus |
39.8 |
60.2 |
175 |
34 |
104 |
212 |
9.0 |
Stats for 12S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
40.2 |
59.8 |
206 |
178 |
232 |
340 |
10.7 |
Lepus timidus |
40.0 |
60.0 |
211 |
171 |
226 |
348 |
18.0 |
Oryctolagus cuniculus |
40.2 |
59.8 |
211 |
174 |
229 |
343 |
9.0 |
Stats for 16S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Lepus europaeus |
38.3 |
61.7 |
330 |
274 |
406 |
569 |
10.7 |
Lepus timidus |
38.4 |
61.6 |
328 |
277 |
406 |
566 |
18.0 |
Oryctolagus cuniculus |
38.2 |
61.8 |
322 |
281 |
402 |
574 |
9.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.