Stats for family Sparidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
46.4 |
53.6 |
4935 |
2922 |
4520 |
4564 |
15.0 |
Sparus aurata |
46.0 |
54.0 |
4802 |
2853 |
4538 |
4459 |
11.0 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
47.1 |
52.9 |
3558 |
1818 |
3183 |
2856 |
15.0 |
Sparus aurata |
46.5 |
53.5 |
3498 |
1812 |
3282 |
2829 |
11.0 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
37.4 |
62.6 |
256 |
191 |
363 |
385 |
15.0 |
Sparus aurata |
36.6 |
63.4 |
215 |
145 |
303 |
320 |
11.0 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
45.9 |
54.1 |
400 |
313 |
377 |
463 |
15.0 |
Sparus aurata |
45.7 |
54.3 |
398 |
312 |
382 |
460 |
11.0 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
47.2 |
52.8 |
679 |
570 |
566 |
833 |
15.0 |
Sparus aurata |
47.0 |
53.0 |
671 |
573 |
560 |
841 |
11.0 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
45.0 |
55.0 |
215 |
93 |
214 |
162 |
15.0 |
Sparus aurata |
45.8 |
54.2 |
220 |
93 |
209 |
161 |
11.0 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
47.9 |
52.1 |
58 |
21 |
38 |
48 |
15.0 |
Sparus aurata |
46.7 |
53.3 |
55 |
22 |
45 |
43 |
11.0 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
46.5 |
53.5 |
430 |
298 |
459 |
379 |
15.0 |
Sparus aurata |
44.8 |
55.2 |
415 |
287 |
480 |
384 |
11.0 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
44.1 |
55.9 |
189 |
116 |
198 |
188 |
15.0 |
Sparus aurata |
43.3 |
56.7 |
179 |
120 |
203 |
189 |
11.0 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
48.5 |
51.5 |
240 |
141 |
216 |
188 |
15.0 |
Sparus aurata |
47.4 |
52.6 |
237 |
135 |
221 |
192 |
11.0 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
45.4 |
54.6 |
341 |
177 |
342 |
281 |
15.0 |
Sparus aurata |
46.2 |
53.8 |
343 |
184 |
344 |
270 |
11.0 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
49.0 |
51.0 |
316 |
162 |
284 |
213 |
15.0 |
Sparus aurata |
47.2 |
52.8 |
305 |
155 |
305 |
210 |
11.0 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
49.3 |
50.7 |
371 |
144 |
276 |
254 |
15.0 |
Sparus aurata |
49.5 |
50.5 |
372 |
146 |
285 |
243 |
11.0 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
50.1 |
49.9 |
119 |
56 |
106 |
68 |
15.0 |
Sparus aurata |
47.0 |
53.0 |
112 |
52 |
114 |
71 |
11.0 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
49.4 |
50.6 |
457 |
222 |
368 |
328 |
15.0 |
Sparus aurata |
48.2 |
51.8 |
437 |
228 |
390 |
326 |
11.0 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
50.2 |
49.8 |
102 |
47 |
88 |
60 |
15.0 |
Sparus aurata |
48.5 |
51.5 |
98 |
46 |
90 |
63 |
11.0 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
44.8 |
55.2 |
552 |
271 |
521 |
495 |
15.0 |
Sparus aurata |
45.4 |
54.6 |
572 |
265 |
507 |
498 |
11.0 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
46.4 |
53.6 |
169 |
73 |
79 |
201 |
15.0 |
Sparus aurata |
45.4 |
54.6 |
154 |
83 |
96 |
189 |
11.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
48.2 |
51.8 |
243 |
215 |
211 |
282 |
15.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pagellus bogaraveo |
46.6 |
53.4 |
436 |
355 |
355 |
551 |
15.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.