Stats for family Gavialidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
41.7 |
58.3 |
4519 |
2296 |
4415 |
5115 |
24.7 |
Gavialis gangeticus |
41.5 |
58.5 |
4775 |
2351 |
4513 |
5546 |
28.8 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
42.2 |
57.8 |
3317 |
1492 |
3137 |
3449 |
24.7 |
Gavialis gangeticus |
42.8 |
57.2 |
3415 |
1441 |
2980 |
3514 |
28.8 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
27.9 |
72.1 |
186 |
99 |
368 |
370 |
24.7 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
43.3 |
56.7 |
388 |
280 |
378 |
495 |
24.7 |
Gavialis gangeticus |
42.7 |
57.3 |
383 |
276 |
384 |
501 |
28.8 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
44.8 |
55.2 |
550 |
415 |
471 |
716 |
24.7 |
Gavialis gangeticus |
44.9 |
55.1 |
665 |
496 |
554 |
869 |
28.8 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
38.5 |
61.5 |
193 |
75 |
201 |
227 |
24.7 |
Gavialis gangeticus |
39.4 |
60.6 |
202 |
72 |
190 |
231 |
28.8 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
38.9 |
61.1 |
51 |
12 |
46 |
53 |
24.7 |
Gavialis gangeticus |
38.3 |
61.7 |
51 |
11 |
44 |
56 |
28.8 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
42.7 |
57.3 |
431 |
246 |
437 |
470 |
24.7 |
Gavialis gangeticus |
42.6 |
57.4 |
415 |
242 |
426 |
460 |
28.8 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
41.6 |
58.4 |
184 |
102 |
177 |
225 |
24.7 |
Gavialis gangeticus |
42.0 |
58.0 |
192 |
97 |
170 |
229 |
28.8 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
46.4 |
53.6 |
240 |
124 |
198 |
222 |
24.7 |
Gavialis gangeticus |
45.0 |
55.0 |
234 |
119 |
206 |
225 |
28.8 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
44.3 |
55.7 |
376 |
140 |
308 |
341 |
24.7 |
Gavialis gangeticus |
43.8 |
56.2 |
362 |
143 |
307 |
341 |
28.8 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
40.9 |
59.1 |
265 |
129 |
285 |
284 |
24.7 |
Gavialis gangeticus |
42.5 |
57.5 |
277 |
132 |
277 |
277 |
28.8 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
42.0 |
58.0 |
324 |
115 |
291 |
314 |
24.7 |
Gavialis gangeticus |
41.8 |
58.2 |
330 |
107 |
285 |
324 |
28.8 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
39.1 |
60.9 |
83 |
53 |
112 |
100 |
24.7 |
Gavialis gangeticus |
39.7 |
60.3 |
87 |
51 |
106 |
104 |
28.8 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
40.8 |
59.2 |
392 |
167 |
395 |
417 |
24.7 |
Gavialis gangeticus |
43.1 |
56.9 |
438 |
154 |
345 |
437 |
28.8 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
38.8 |
61.2 |
87 |
27 |
100 |
80 |
24.7 |
Gavialis gangeticus |
46.1 |
53.9 |
104 |
33 |
86 |
74 |
28.8 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
43.1 |
56.9 |
540 |
253 |
493 |
553 |
24.7 |
Gavialis gangeticus |
43.5 |
56.5 |
551 |
233 |
455 |
562 |
28.8 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
44.9 |
55.1 |
174 |
63 |
105 |
186 |
24.7 |
Gavialis gangeticus |
43.9 |
56.1 |
181 |
51 |
91 |
205 |
28.8 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
46.8 |
53.2 |
140 |
116 |
117 |
174 |
24.7 |
Gavialis gangeticus |
45.6 |
54.4 |
250 |
201 |
214 |
325 |
28.8 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Tomistoma schlegelii |
44.2 |
55.8 |
410 |
299 |
354 |
542 |
24.7 |
Gavialis gangeticus |
44.5 |
55.5 |
415 |
295 |
340 |
544 |
28.8 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.