Stats for family Cichlidae
| Stats for total mtDNA (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
46.4 |
53.6 |
5102 |
2608 |
4300 |
4612 |
10.0 |
| Oreochromis mossambicus |
45.6 |
54.4 |
4987 |
2604 |
4383 |
4667 |
11.0 |
| Oreochromis niloticus |
45.8 |
54.2 |
5033 |
2585 |
4354 |
4655 |
9.0 |
| Stats for total protein-coding genes (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.1 |
52.9 |
3774 |
1616 |
3087 |
2974 |
10.0 |
| Oreochromis mossambicus |
46.1 |
53.9 |
3697 |
1618 |
3164 |
3045 |
11.0 |
| Oreochromis niloticus |
46.3 |
53.7 |
3706 |
1598 |
3138 |
3009 |
9.0 |
| Stats for D-loop (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
35.9 |
64.1 |
217 |
140 |
322 |
316 |
10.0 |
| Oreochromis niloticus |
35.9 |
64.1 |
199 |
133 |
300 |
292 |
9.0 |
| Stats for total tRNA-coding genes (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
45.2 |
54.8 |
389 |
312 |
373 |
478 |
10.0 |
| Oreochromis mossambicus |
44.8 |
55.2 |
389 |
309 |
377 |
482 |
11.0 |
| Oreochromis niloticus |
44.8 |
55.2 |
387 |
308 |
377 |
481 |
9.0 |
| Stats for total rRNA-coding genes (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.6 |
52.4 |
717 |
538 |
528 |
855 |
10.0 |
| Oreochromis mossambicus |
47.2 |
52.8 |
701 |
543 |
549 |
845 |
11.0 |
| Oreochromis niloticus |
47.6 |
52.4 |
721 |
536 |
528 |
858 |
9.0 |
| Stats for ATP6 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
45.5 |
54.5 |
227 |
84 |
198 |
175 |
10.0 |
| Oreochromis mossambicus |
43.6 |
56.4 |
205 |
89 |
213 |
168 |
11.0 |
| Oreochromis niloticus |
44.7 |
55.3 |
219 |
87 |
208 |
170 |
9.0 |
| Stats for ATP8 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
44.6 |
55.4 |
58 |
17 |
40 |
53 |
10.0 |
| Oreochromis mossambicus |
45.2 |
54.8 |
57 |
19 |
40 |
52 |
11.0 |
| Oreochromis niloticus |
47.0 |
53.0 |
60 |
19 |
37 |
52 |
9.0 |
| Stats for COX1 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
45.7 |
54.3 |
447 |
283 |
470 |
396 |
10.0 |
| Oreochromis mossambicus |
46.0 |
54.0 |
452 |
285 |
464 |
401 |
11.0 |
| Oreochromis niloticus |
45.6 |
54.4 |
446 |
282 |
463 |
405 |
9.0 |
| Stats for COX2 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
44.4 |
55.6 |
200 |
107 |
182 |
202 |
10.0 |
| Oreochromis mossambicus |
45.0 |
55.0 |
200 |
111 |
185 |
195 |
11.0 |
| Oreochromis niloticus |
45.3 |
54.7 |
200 |
113 |
181 |
197 |
9.0 |
| Stats for COX3 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.8 |
52.2 |
247 |
128 |
211 |
198 |
10.0 |
| Oreochromis mossambicus |
46.1 |
53.9 |
253 |
134 |
235 |
218 |
11.0 |
| Oreochromis niloticus |
46.8 |
53.2 |
241 |
126 |
218 |
199 |
9.0 |
| Stats for CYTB (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.2 |
52.8 |
379 |
159 |
333 |
270 |
10.0 |
| Oreochromis mossambicus |
46.8 |
53.2 |
377 |
154 |
334 |
270 |
11.0 |
| Oreochromis niloticus |
45.9 |
54.1 |
370 |
154 |
340 |
277 |
9.0 |
| Stats for ND1 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.3 |
52.7 |
328 |
133 |
271 |
243 |
10.0 |
| Oreochromis mossambicus |
46.7 |
53.3 |
319 |
136 |
277 |
243 |
11.0 |
| Oreochromis niloticus |
46.6 |
53.4 |
324 |
130 |
276 |
245 |
9.0 |
| Stats for ND2 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.6 |
52.4 |
378 |
120 |
270 |
278 |
10.0 |
| Oreochromis mossambicus |
47.3 |
52.7 |
377 |
123 |
275 |
281 |
11.0 |
| Oreochromis niloticus |
47.6 |
52.4 |
378 |
120 |
275 |
273 |
9.0 |
| Stats for ND3 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.9 |
52.1 |
117 |
50 |
112 |
70 |
10.0 |
| Oreochromis mossambicus |
46.7 |
53.3 |
115 |
49 |
112 |
75 |
11.0 |
| Oreochromis niloticus |
48.1 |
51.9 |
118 |
50 |
108 |
73 |
9.0 |
| Stats for ND4 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
47.0 |
53.0 |
457 |
192 |
374 |
358 |
10.0 |
| Oreochromis mossambicus |
46.0 |
54.0 |
452 |
188 |
374 |
376 |
11.0 |
| Oreochromis niloticus |
45.5 |
54.5 |
446 |
182 |
380 |
373 |
9.0 |
| Stats for ND4L (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
55.9 |
44.1 |
119 |
47 |
75 |
56 |
10.0 |
| Oreochromis mossambicus |
50.8 |
49.2 |
107 |
44 |
87 |
59 |
11.0 |
| Oreochromis niloticus |
51.9 |
48.1 |
109 |
45 |
85 |
58 |
9.0 |
| Stats for ND5 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
46.6 |
53.4 |
621 |
236 |
487 |
495 |
10.0 |
| Oreochromis mossambicus |
44.6 |
55.4 |
589 |
233 |
506 |
516 |
11.0 |
| Oreochromis niloticus |
45.2 |
54.8 |
597 |
234 |
506 |
502 |
9.0 |
| Stats for ND6 (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
50.0 |
50.0 |
199 |
62 |
70 |
191 |
10.0 |
| Oreochromis mossambicus |
48.3 |
51.7 |
197 |
55 |
68 |
202 |
11.0 |
| Oreochromis niloticus |
49.6 |
50.4 |
201 |
58 |
67 |
196 |
9.0 |
| Stats for 12S rRNA gene (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
50.5 |
49.5 |
266 |
211 |
182 |
285 |
10.0 |
| Oreochromis mossambicus |
49.3 |
50.7 |
257 |
207 |
191 |
286 |
11.0 |
| Oreochromis niloticus |
49.6 |
50.4 |
260 |
208 |
189 |
287 |
9.0 |
| Stats for 16S rRNA gene (group size: 3 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Oreochromis esculentus |
45.9 |
54.1 |
451 |
327 |
346 |
570 |
10.0 |
| Oreochromis mossambicus |
46.0 |
54.0 |
444 |
336 |
358 |
559 |
11.0 |
| Oreochromis niloticus |
46.4 |
53.6 |
461 |
328 |
339 |
571 |
9.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
