Stats for family Poeciliidae

Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 41.6 58.4 4452 2433 4646 5007 5.0
Gambusia affinis 44.9 55.1 4856 2603 4502 4653 3.0
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 41.3 58.7 3212 1499 3402 3298 5.0
Gambusia affinis 45.4 54.6 3543 1643 3268 2958 3.0
Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 34.3 65.7 181 119 282 293 5.0
Gambusia affinis 36.7 63.3 189 126 276 267 3.0
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 43.2 56.8 382 288 390 492 5.0
Gambusia affinis 45.2 54.8 397 303 368 482 3.0
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 44.7 55.3 656 515 556 893 5.0
Gambusia affinis 44.9 55.1 670 508 553 891 3.0
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 40.2 59.8 184 91 220 189 5.0
Gambusia affinis 46.0 54.0 223 91 199 170 3.0
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 36.9 63.1 46 16 49 57 5.0
Gambusia affinis 41.1 58.9 51 18 44 55 3.0
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 41.9 58.1 396 257 490 414 5.0
Gambusia affinis 45.6 54.4 434 276 458 389 3.0
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 41.1 58.9 179 105 199 208 5.0
Gambusia affinis 44.3 55.7 199 107 187 198 3.0
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 42.7 57.3 214 121 233 217 5.0
Gambusia affinis 47.4 52.6 241 131 217 196 3.0
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 40.2 59.8 303 155 363 319 5.0
Gambusia affinis 46.0 54.0 354 170 347 269 3.0
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 40.1 59.9 263 128 312 272 5.0
Gambusia affinis 46.4 53.6 303 149 286 237 3.0
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 42.5 57.5 328 116 287 314 5.0
Gambusia affinis 45.2 54.8 353 120 299 275 3.0
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 39.0 61.0 88 48 124 89 5.0
Gambusia affinis 43.0 57.0 101 49 118 81 3.0
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 42.3 57.7 411 173 410 387 5.0
Gambusia affinis 45.8 54.2 451 184 400 351 3.0
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 43.4 56.6 90 39 95 73 5.0
Gambusia affinis 46.5 53.5 97 41 88 71 3.0
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 39.9 60.1 530 204 542 563 5.0
Gambusia affinis 43.7 56.3 558 243 540 492 3.0
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 44.3 55.7 183 48 84 207 5.0
Gambusia affinis 47.5 52.5 181 67 91 183 3.0
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 46.5 53.5 243 198 198 309 5.0
Gambusia affinis 46.8 53.2 251 192 192 312 3.0
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Poecilia reticulata 43.7 56.3 413 317 358 584 5.0
Gambusia affinis 43.9 56.1 419 316 361 579 3.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.