Stats for family Erinaceidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
32.6 |
67.4 |
3503 |
2185 |
5822 |
5937 |
11.7 |
Hemiechinus auritus |
30.9 |
69.1 |
3313 |
2028 |
5856 |
6086 |
7.6 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
32.4 |
67.6 |
2393 |
1284 |
3985 |
3685 |
11.7 |
Hemiechinus auritus |
30.5 |
69.5 |
2254 |
1208 |
4027 |
3851 |
7.6 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Hemiechinus auritus |
27.1 |
72.9 |
322 |
169 |
622 |
700 |
7.6 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
33.3 |
66.7 |
288 |
215 |
473 |
536 |
11.7 |
Hemiechinus auritus |
33.0 |
67.0 |
275 |
223 |
470 |
540 |
7.6 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
35.6 |
64.4 |
469 |
432 |
692 |
941 |
11.7 |
Hemiechinus auritus |
33.8 |
66.2 |
453 |
412 |
716 |
977 |
7.6 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
32.2 |
67.8 |
151 |
68 |
240 |
222 |
11.7 |
Hemiechinus auritus |
29.2 |
70.8 |
137 |
62 |
251 |
231 |
7.6 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
24.6 |
75.4 |
37 |
14 |
74 |
82 |
11.7 |
Hemiechinus auritus |
23.5 |
76.5 |
36 |
12 |
80 |
76 |
7.6 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
36.2 |
63.8 |
320 |
239 |
553 |
433 |
11.7 |
Hemiechinus auritus |
35.7 |
64.3 |
310 |
241 |
540 |
454 |
7.6 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
35.5 |
64.5 |
154 |
89 |
228 |
213 |
11.7 |
Hemiechinus auritus |
31.9 |
68.1 |
135 |
83 |
243 |
223 |
7.6 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
36.2 |
63.8 |
175 |
109 |
276 |
224 |
11.7 |
Hemiechinus auritus |
36.2 |
63.8 |
173 |
111 |
272 |
228 |
7.6 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
34.6 |
65.4 |
257 |
138 |
412 |
333 |
11.7 |
Hemiechinus auritus |
34.0 |
66.0 |
262 |
126 |
389 |
363 |
7.6 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
33.2 |
66.8 |
210 |
107 |
329 |
308 |
11.7 |
Hemiechinus auritus |
30.6 |
69.4 |
190 |
102 |
353 |
309 |
7.6 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
28.4 |
71.6 |
201 |
95 |
381 |
367 |
11.7 |
Hemiechinus auritus |
25.8 |
74.2 |
191 |
78 |
385 |
390 |
7.6 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
31.0 |
69.0 |
67 |
40 |
121 |
117 |
11.7 |
Hemiechinus auritus |
30.2 |
69.8 |
64 |
41 |
127 |
116 |
7.6 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
30.9 |
69.1 |
289 |
137 |
493 |
459 |
11.7 |
Hemiechinus auritus |
26.5 |
73.5 |
245 |
120 |
522 |
491 |
7.6 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
28.3 |
71.7 |
50 |
34 |
118 |
95 |
11.7 |
Hemiechinus auritus |
25.9 |
74.1 |
45 |
32 |
123 |
97 |
7.6 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
30.0 |
70.0 |
361 |
182 |
655 |
614 |
11.7 |
Hemiechinus auritus |
29.1 |
70.9 |
356 |
172 |
633 |
654 |
7.6 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
31.6 |
68.4 |
132 |
37 |
127 |
238 |
11.7 |
Hemiechinus auritus |
29.4 |
70.6 |
121 |
36 |
136 |
241 |
7.6 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
37.2 |
62.8 |
188 |
173 |
259 |
351 |
11.7 |
Hemiechinus auritus |
35.7 |
64.3 |
187 |
162 |
264 |
365 |
7.6 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Erinaceus europaeus |
34.5 |
65.5 |
281 |
259 |
433 |
590 |
11.7 |
Hemiechinus auritus |
32.7 |
67.3 |
266 |
250 |
452 |
612 |
7.6 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.