Viewing data for Hemiechinus auritus
| Scientific name | Hemiechinus auritus |
| Common name | Long-eared desert hedgehog |
| Maximum lifespan | 7.60 years (Hemiechinus auritus@AnAge) |
| Total mtDNA (size: 17283 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5341 | 11942 | 3313 | 2028 | 5856 | 6086 |
| Base content per 1 kb (bases) | 309 | 691 | 192 | 117 | 339 | 352 |
| Base content (%) | 30.9% | 69.1% | ||||
| Total protein-coding genes (size: 11340 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 3462 | 7878 | 2254 | 1208 | 4027 | 3851 |
| Base content per 1 kb (bases) | 305 | 695 | 199 | 107 | 355 | 340 |
| Base content (%) | 30.5% | 69.5% | ||||
| D-loop (size: 1813 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 491 | 1322 | 322 | 169 | 622 | 700 |
| Base content per 1 kb (bases) | 271 | 729 | 178 | 93 | 343 | 386 |
| Base content (%) | 27.1% | 72.9% | ||||
| Total tRNA-coding genes (size: 1508 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 498 | 1010 | 275 | 223 | 470 | 540 |
| Base content per 1 kb (bases) | 330 | 670 | 182 | 148 | 312 | 358 |
| Base content (%) | 33.0% | 67.0% | ||||
| Total rRNA-coding genes (size: 2558 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 865 | 1693 | 453 | 412 | 716 | 977 |
| Base content per 1 kb (bases) | 338 | 662 | 177 | 161 | 280 | 382 |
| Base content (%) | 33.8% | 66.2% | ||||
| 12S rRNA gene (size: 978 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 349 | 629 | 187 | 162 | 264 | 365 |
| Base content per 1 kb (bases) | 357 | 643 | 191 | 166 | 270 | 373 |
| Base content (%) | 35.7% | 64.3% | ||||
| 16S rRNA gene (size: 1580 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 516 | 1064 | 266 | 250 | 452 | 612 |
| Base content per 1 kb (bases) | 327 | 673 | 168 | 158 | 286 | 387 |
| Base content (%) | 32.7% | 67.3% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 199 | 482 | 137 | 62 | 251 | 231 |
| Base content per 1 kb (bases) | 292 | 708 | 201 | 91 | 369 | 339 |
| Base content (%) | 29.2% | 70.8% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 48 | 156 | 36 | 12 | 80 | 76 |
| Base content per 1 kb (bases) | 235 | 765 | 176 | 59 | 392 | 373 |
| Base content (%) | 23.5% | 76.5% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 551 | 994 | 310 | 241 | 540 | 454 |
| Base content per 1 kb (bases) | 357 | 643 | 201 | 156 | 350 | 294 |
| Base content (%) | 35.7% | 64.3% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 218 | 466 | 135 | 83 | 243 | 223 |
| Base content per 1 kb (bases) | 319 | 681 | 197 | 121 | 355 | 326 |
| Base content (%) | 31.9% | 68.1% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 284 | 500 | 173 | 111 | 272 | 228 |
| Base content per 1 kb (bases) | 362 | 638 | 221 | 142 | 347 | 291 |
| Base content (%) | 36.2% | 63.8% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 388 | 752 | 262 | 126 | 389 | 363 |
| Base content per 1 kb (bases) | 340 | 660 | 230 | 111 | 341 | 318 |
| Base content (%) | 34.0% | 66.0% | ||||
| ND1 (size: 954 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 292 | 662 | 190 | 102 | 353 | 309 |
| Base content per 1 kb (bases) | 306 | 694 | 199 | 107 | 370 | 324 |
| Base content (%) | 30.6% | 69.4% | ||||
| ND2 (size: 1044 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 269 | 775 | 191 | 78 | 385 | 390 |
| Base content per 1 kb (bases) | 258 | 742 | 183 | 75 | 369 | 374 |
| Base content (%) | 25.8% | 74.2% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 105 | 243 | 64 | 41 | 127 | 116 |
| Base content per 1 kb (bases) | 302 | 698 | 184 | 118 | 365 | 333 |
| Base content (%) | 30.2% | 69.8% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 365 | 1013 | 245 | 120 | 522 | 491 |
| Base content per 1 kb (bases) | 265 | 735 | 178 | 87 | 379 | 356 |
| Base content (%) | 26.5% | 73.5% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 77 | 220 | 45 | 32 | 123 | 97 |
| Base content per 1 kb (bases) | 259 | 741 | 152 | 108 | 414 | 327 |
| Base content (%) | 25.9% | 74.1% | ||||
| ND5 (size: 1815 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 528 | 1287 | 356 | 172 | 633 | 654 |
| Base content per 1 kb (bases) | 291 | 709 | 196 | 95 | 349 | 360 |
| Base content (%) | 29.1% | 70.9% | ||||
| ND6 (size: 534 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 157 | 377 | 121 | 36 | 136 | 241 |
| Base content per 1 kb (bases) | 294 | 706 | 227 | 67 | 255 | 451 |
| Base content (%) | 29.4% | 70.6% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.98%) 
Alanine (Ala, A)
n = 16 (7.08%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 23 (10.18%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 5 (2.21%) 
Leucine (Leu, L)
n = 44 (19.47%) 
Isoleucine (Ile, I)
n = 35 (15.49%) 
Methionine (Met, M)
n = 14 (6.19%) 
Proline (Pro, P)
n = 11 (4.87%) 
Phenylalanine (Phe, F)
n = 11 (4.87%) 
Tyrosine (Tyr, Y)
n = 3 (1.33%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 9 (3.98%) 
Glutamine (Gln, Q)
n = 8 (3.54%) 
Histidine (His, H)
n = 7 (3.1%) 
Lysine (Lys, K)
n = 6 (2.65%) 
Arginine (Arg, R)
n = 4 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 30 | 5 | 11 | 7 | 4 | 10 | 0 | 20 | 8 | 0 | 2 | 1 | 2 | 0 | 11 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 7 | 3 | 6 | 0 | 2 | 3 | 4 | 0 | 6 | 1 | 4 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 13 | 0 | 2 | 0 | 6 | 0 | 4 | 2 | 2 | 1 | 0 | 3 | 7 | 2 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 0 | 0 | 1 | 6 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 34 | 51 | 93 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 58 | 38 | 109 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 28 | 100 | 93 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSSWFMMILTMIFTLFIIMQLKISSHKMFIKPESEDYIFSSSSKPWEHKWTKIYLPLLLSLH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 10 (14.93%)
Threonine (Thr, T)
n = 4 (5.97%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 9 (13.43%)
Isoleucine (Ile, I)
n = 8 (11.94%)
Methionine (Met, M)
n = 6 (8.96%)
Proline (Pro, P)
n = 4 (5.97%)
Phenylalanine (Phe, F)
n = 5 (7.46%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 2 (2.99%)
Glutamic acid (Glu, E)
n = 3 (4.48%)
Asparagine (Asn, N)
n = 0 (0%)
Glutamine (Gln, Q)
n = 2 (2.99%)
Histidine (His, H)
n = 3 (4.48%)
Lysine (Lys, K)
n = 6 (8.96%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 0 | 5 | 2 | 0 | 2 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 5 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 1 | 4 | 2 | 3 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 3 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 13 | 25 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 17 | 19 | 28 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 6 | 32 | 27 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 43 (8.37%)
Serine (Ser, S)
n = 28 (5.45%)
Threonine (Thr, T)
n = 36 (7.0%)
Cysteine (Cys, C)
n = 2 (0.39%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 58 (11.28%)
Isoleucine (Ile, I)
n = 40 (7.78%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 27 (5.25%)
Phenylalanine (Phe, F)
n = 43 (8.37%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 18 (3.5%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 36 | 4 | 26 | 14 | 5 | 12 | 0 | 26 | 6 | 0 | 15 | 4 | 18 | 1 | 31 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 14 | 10 | 19 | 0 | 8 | 9 | 26 | 4 | 12 | 6 | 9 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 21 | 1 | 7 | 5 | 13 | 0 | 1 | 2 | 9 | 10 | 0 | 1 | 15 | 3 | 15 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 10 | 0 | 8 | 7 | 9 | 0 | 0 | 1 | 7 | 0 | 0 | 0 | 1 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 92 | 136 | 134 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 131 | 98 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 87 | 220 | 197 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 12 (5.29%)
Serine (Ser, S)
n = 20 (8.81%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 8 (3.52%)
Leucine (Leu, L)
n = 30 (13.22%)
Isoleucine (Ile, I)
n = 25 (11.01%)
Methionine (Met, M)
n = 16 (7.05%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 13 (5.73%)
Glutamic acid (Glu, E)
n = 13 (5.73%)
Asparagine (Asn, N)
n = 6 (2.64%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 5 | 14 | 7 | 3 | 1 | 0 | 18 | 5 | 1 | 4 | 0 | 4 | 0 | 6 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 1 | 5 | 4 | 3 | 0 | 3 | 1 | 4 | 0 | 5 | 6 | 2 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 6 | 0 | 3 | 4 | 9 | 0 | 4 | 0 | 7 | 3 | 0 | 1 | 6 | 0 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 13 | 0 | 11 | 2 | 4 | 0 | 2 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 42 | 72 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 58 | 59 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 35 | 92 | 97 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 17 (6.54%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 19 (7.31%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 17 (6.54%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 4 | 10 | 6 | 3 | 15 | 0 | 8 | 7 | 0 | 6 | 2 | 7 | 1 | 15 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 1 | 5 | 7 | 5 | 0 | 1 | 9 | 9 | 0 | 4 | 4 | 3 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 11 | 0 | 8 | 1 | 4 | 0 | 4 | 2 | 12 | 0 | 0 | 1 | 7 | 1 | 9 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 8 | 0 | 2 | 1 | 4 | 0 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 63 | 62 | 66 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 60 | 57 | 100 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 51 | 105 | 101 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (6.07%)
Alanine (Ala, A)
n = 16 (4.22%)
Serine (Ser, S)
n = 29 (7.65%)
Threonine (Thr, T)
n = 28 (7.39%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 11 (2.9%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 42 (11.08%)
Methionine (Met, M)
n = 20 (5.28%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 28 (7.39%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 26 | 16 | 19 | 11 | 3 | 18 | 0 | 26 | 7 | 0 | 2 | 1 | 8 | 0 | 17 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 2 | 7 | 4 | 5 | 0 | 9 | 5 | 7 | 2 | 5 | 7 | 9 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 14 | 0 | 7 | 3 | 14 | 1 | 0 | 4 | 10 | 5 | 0 | 1 | 12 | 5 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 6 | 0 | 3 | 9 | 9 | 1 | 0 | 0 | 8 | 0 | 1 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 79 | 122 | 111 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 90 | 78 | 160 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 93 | 163 | 118 | ||||||||||||
| ND1 (size: 954 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.47%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 26 (8.2%)
Threonine (Thr, T)
n = 15 (4.73%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 15 (4.73%)
Leucine (Leu, L)
n = 62 (19.56%)
Isoleucine (Ile, I)
n = 27 (8.52%)
Methionine (Met, M)
n = 20 (6.31%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 21 (6.62%)
Tyrosine (Tyr, Y)
n = 9 (2.84%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 15 (4.73%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 1 (0.32%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 7 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 7 | 20 | 8 | 1 | 17 | 0 | 36 | 6 | 0 | 2 | 3 | 10 | 0 | 18 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 1 | 5 | 8 | 15 | 0 | 5 | 3 | 3 | 0 | 10 | 6 | 5 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 12 | 0 | 9 | 4 | 9 | 0 | 4 | 0 | 8 | 1 | 0 | 0 | 12 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 10 | 1 | 2 | 1 | 8 | 0 | 1 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 61 | 89 | 100 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 86 | 54 | 145 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 43 | 166 | 108 | ||||||||||||
| ND2 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.46%)
Alanine (Ala, A)
n = 19 (5.48%)
Serine (Ser, S)
n = 33 (9.51%)
Threonine (Thr, T)
n = 21 (6.05%)
Cysteine (Cys, C)
n = 2 (0.58%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 53 (15.27%)
Isoleucine (Ile, I)
n = 42 (12.1%)
Methionine (Met, M)
n = 42 (12.1%)
Proline (Pro, P)
n = 14 (4.03%)
Phenylalanine (Phe, F)
n = 19 (5.48%)
Tyrosine (Tyr, Y)
n = 18 (5.19%)
Tryptophan (Trp, W)
n = 9 (2.59%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 27 (7.78%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 4 (1.15%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 3 (0.86%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 31 | 11 | 40 | 8 | 5 | 16 | 0 | 23 | 8 | 0 | 0 | 2 | 6 | 0 | 14 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 0 | 6 | 4 | 8 | 1 | 1 | 1 | 10 | 0 | 5 | 3 | 6 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 15 | 0 | 7 | 5 | 17 | 0 | 3 | 1 | 15 | 3 | 0 | 1 | 20 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 4 | 0 | 0 | 0 | 8 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 58 | 145 | 102 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 83 | 71 | 164 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 50 | 174 | 119 | ||||||||||||
| ND3 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.46%)
Alanine (Ala, A)
n = 19 (5.48%)
Serine (Ser, S)
n = 33 (9.51%)
Threonine (Thr, T)
n = 21 (6.05%)
Cysteine (Cys, C)
n = 2 (0.58%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 53 (15.27%)
Isoleucine (Ile, I)
n = 42 (12.1%)
Methionine (Met, M)
n = 42 (12.1%)
Proline (Pro, P)
n = 14 (4.03%)
Phenylalanine (Phe, F)
n = 19 (5.48%)
Tyrosine (Tyr, Y)
n = 18 (5.19%)
Tryptophan (Trp, W)
n = 9 (2.59%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 27 (7.78%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 4 (1.15%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 3 (0.86%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 31 | 11 | 40 | 8 | 5 | 16 | 0 | 23 | 8 | 0 | 0 | 2 | 6 | 0 | 14 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 0 | 6 | 4 | 8 | 1 | 1 | 1 | 10 | 0 | 5 | 3 | 6 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 15 | 0 | 7 | 5 | 17 | 0 | 3 | 1 | 15 | 3 | 0 | 1 | 20 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 4 | 0 | 0 | 0 | 8 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 58 | 145 | 102 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 83 | 71 | 164 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 50 | 174 | 119 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 22 (4.8%)
Serine (Ser, S)
n = 33 (7.21%)
Threonine (Thr, T)
n = 43 (9.39%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 9 (1.97%)
Leucine (Leu, L)
n = 88 (19.21%)
Isoleucine (Ile, I)
n = 54 (11.79%)
Methionine (Met, M)
n = 36 (7.86%)
Proline (Pro, P)
n = 18 (3.93%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 22 (4.8%)
Tryptophan (Trp, W)
n = 11 (2.4%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 25 (5.46%)
Glutamine (Gln, Q)
n = 9 (1.97%)
Histidine (His, H)
n = 13 (2.84%)
Lysine (Lys, K)
n = 15 (3.28%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 45 | 9 | 33 | 13 | 4 | 23 | 0 | 48 | 9 | 0 | 2 | 1 | 5 | 1 | 16 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 4 | 0 | 11 | 1 | 9 | 1 | 4 | 3 | 10 | 0 | 9 | 0 | 8 | 1 | 20 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 15 | 1 | 10 | 2 | 11 | 1 | 6 | 3 | 16 | 6 | 0 | 0 | 20 | 5 | 9 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 9 | 1 | 2 | 1 | 15 | 0 | 2 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 89 | 182 | 127 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 107 | 97 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 49 | 212 | 189 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 5 (5.1%)
Threonine (Thr, T)
n = 3 (3.06%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 8 (8.16%)
Methionine (Met, M)
n = 13 (13.27%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 7 (7.14%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 1 | 12 | 2 | 2 | 4 | 0 | 11 | 1 | 0 | 2 | 0 | 3 | 1 | 3 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 3 | 0 | 4 | 1 | 3 | 0 | 3 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 2 | 0 | 2 | 1 | 2 | 0 | 0 | 0 | 5 | 2 | 0 | 0 | 5 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 21 | 14 | 32 | 32 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 17 | 23 | 51 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 14 | 42 | 40 | ||||||||||||
| ND5 (size: 1815 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.14%)
Alanine (Ala, A)
n = 35 (5.79%)
Serine (Ser, S)
n = 44 (7.28%)
Threonine (Thr, T)
n = 54 (8.94%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 17 (2.81%)
Leucine (Leu, L)
n = 78 (12.91%)
Isoleucine (Ile, I)
n = 56 (9.27%)
Methionine (Met, M)
n = 66 (10.93%)
Proline (Pro, P)
n = 23 (3.81%)
Phenylalanine (Phe, F)
n = 43 (7.12%)
Tyrosine (Tyr, Y)
n = 20 (3.31%)
Tryptophan (Trp, W)
n = 11 (1.82%)
Aspartic acid (Asp, D)
n = 12 (1.99%)
Glutamic acid (Glu, E)
n = 9 (1.49%)
Asparagine (Asn, N)
n = 41 (6.79%)
Glutamine (Gln, Q)
n = 17 (2.81%)
Histidine (His, H)
n = 18 (2.98%)
Lysine (Lys, K)
n = 22 (3.64%)
Arginine (Arg, R)
n = 8 (1.32%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 45 | 11 | 64 | 7 | 7 | 15 | 3 | 46 | 16 | 1 | 7 | 1 | 8 | 1 | 25 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 4 | 1 | 16 | 12 | 6 | 1 | 1 | 11 | 11 | 2 | 7 | 4 | 12 | 0 | 21 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 24 | 1 | 10 | 4 | 19 | 1 | 5 | 5 | 14 | 6 | 1 | 0 | 29 | 12 | 10 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 7 | 2 | 10 | 2 | 22 | 0 | 2 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 98 | 98 | 249 | 160 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 59 | 146 | 140 | 260 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 112 | 265 | 213 | ||||||||||||
| ND6 (size: 534 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (13.56%)
Alanine (Ala, A)
n = 6 (3.39%)
Serine (Ser, S)
n = 17 (9.6%)
Threonine (Thr, T)
n = 6 (3.39%)
Cysteine (Cys, C)
n = 4 (2.26%)
Valine (Val, V)
n = 18 (10.17%)
Leucine (Leu, L)
n = 26 (14.69%)
Isoleucine (Ile, I)
n = 12 (6.78%)
Methionine (Met, M)
n = 10 (5.65%)
Proline (Pro, P)
n = 3 (1.69%)
Phenylalanine (Phe, F)
n = 16 (9.04%)
Tyrosine (Tyr, Y)
n = 9 (5.08%)
Tryptophan (Trp, W)
n = 4 (2.26%)
Aspartic acid (Asp, D)
n = 4 (2.26%)
Glutamic acid (Glu, E)
n = 9 (5.08%)
Asparagine (Asn, N)
n = 5 (2.82%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (1.69%)
Arginine (Arg, R)
n = 1 (0.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 0 | 7 | 0 | 0 | 3 | 0 | 19 | 0 | 0 | 5 | 0 | 11 | 2 | 15 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 4 | 0 | 6 | 0 | 0 | 0 | 15 | 0 | 5 | 4 | 3 | 0 | 0 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 0 | 5 | 0 | 4 | 0 | 7 | 1 | 7 | 2 | 1 | 4 | 4 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 5 | 4 | 4 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 7 | 44 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 24 | 31 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 5 | 61 | 93 | ||||||||||||
| Total protein-coding genes (size: 11408 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 203 (5.34%)
Alanine (Ala, A)
n = 232 (6.1%)
Serine (Ser, S)
n = 287 (7.55%)
Threonine (Thr, T)
n = 275 (7.23%)
Cysteine (Cys, C)
n = 31 (0.82%)
Valine (Val, V)
n = 155 (4.08%)
Leucine (Leu, L)
n = 581 (15.29%)
Isoleucine (Ile, I)
n = 380 (10.0%)
Methionine (Met, M)
n = 294 (7.73%)
Proline (Pro, P)
n = 173 (4.55%)
Phenylalanine (Phe, F)
n = 245 (6.45%)
Tyrosine (Tyr, Y)
n = 149 (3.92%)
Tryptophan (Trp, W)
n = 99 (2.6%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 94 (2.47%)
Asparagine (Asn, N)
n = 180 (4.74%)
Glutamine (Gln, Q)
n = 78 (2.05%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 102 (2.68%)
Arginine (Arg, R)
n = 61 (1.6%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 304 | 76 | 269 | 89 | 38 | 142 | 4 | 295 | 76 | 2 | 49 | 15 | 84 | 7 | 180 | 65 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 25 | 23 | 8 | 88 | 57 | 83 | 4 | 52 | 47 | 92 | 12 | 73 | 37 | 62 | 1 | 92 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 40 | 139 | 4 | 77 | 31 | 114 | 3 | 40 | 22 | 110 | 39 | 2 | 13 | 139 | 41 | 63 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 38 | 86 | 8 | 44 | 27 | 98 | 4 | 12 | 8 | 41 | 0 | 1 | 0 | 10 | 0 | 97 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 755 | 686 | 1294 | 1067 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 457 | 905 | 785 | 1655 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 89 | 589 | 1689 | 1435 | ||||||||||||
>NC_005033.1 Hemiechinus auritus mitochondrion, complete genome GTTAACGTAGCTTAAAATTAAAGCAAAGCACTGAAAATGCTTAGAAGGGTTTTACCCCGTAAACATTTTA AATTTAAAGGTCTGGTCCCAGCCTTCCTATTTATTGTCAGTAAATTTACACATGCAAGTATCAGCTACCC AGTGCAAATGCCCTCTAACCCTAACATGGTATAAAGGAGCAGATATCAAGTACACATAAAAAGTCGCTTA TGACATCTTGCTTAGCCACACCCCCACGGGAAACAGCAGTGATAAATATTGAGCTATGAACGAAAGTTTG ACTAAGTTATACTGATTTTAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCATAT AAATAGGTAATCGGCGTAAAGAGTGTTTAAGATATTTATATAATGAAATTAAAAAATAATTTGGATGTAA AAAGCTTAAATTATATATTAAAATCAACTACAAAAGTGTTTTCATAAAATCTTAATACACGTGAGCTAAG ACCCAAACTAGGATTAGATACCCTACTATGCTTAGCCCTAAACCTAGATAGTTACTTAACAAAACTATAC GCCAGAGAACTACGAGCCACAGCTTAAAACTCAAAGGACTTGGCGGTGCTTTATACCCCCTAGAGGAGCC TGTTCTATAATCGATAAACCCCGCTCAACCTTACCAATCTTTGCTAATTCAGCCTTTATACCGCCATCTT CAGCAAACCCTAAAAAGGAAAAAAAGTAAGCACAATAATCTTCAACATAAAAAAGTTAGGTCAAGGTGCA GCCTATAGATTGGAATGAAATGGGCTACATTCTTTTTTAAAAAGCATAACGGAAATTTTCATGAAACTGA AAATTGAAGGAGGATTTAGTAGTAAATTAAGAGTAGAGTGCTTAATTGAACTCGGCAATGAAGCATGCAC ACACCGCCCGTCACCCTCTTCAAATACATTAAATCGCATATAAATATATACATTAATTATATTACAACGA TAATAGTTTATAAGAAGAGATAAGTCGTAACAAGGTAAGTATACTGGAAAGTGTACTTGGACAATCGGAG TGTAGCTTAAAATAAAGCGACTGCTTTACACCCAGGAGATTCTACCATTATGGACACTTCGAACTAAAGC TAGCCTATTAAAAATATAATATCAAATATAATTATTAATTTAATTAAAGCATTTACTACCAATATACTAG TATAGGCGATAGAAAATTTATATAGCGCAATAGATAAAGTACCGTAAGGGAACGATTGAAAGATAATTTA AAGTAATAAATAGCAAAGATTAAATCTTTTACCTTTTGCATAATGATTTAGCCAGAATAAAATTAGCAAA GAGAACTTAAGCTAATTACCCCGAAACCAGACGAGCTATCTAACAACAACTTTATGAGTCAACTCATCTA TGTGACAAAATAGTGAGAAGATTGCTAGATAGAGGTGAAAAGCCTATCGAGCCTGGTGATAGCTGGTTAT CCAAATAAGAATTTCAGTTCAACTTTAAATTTACCTATATAACATTTAATAAAATGTAAATTTAAAATAT AATTCTAAGAGGGACAGCTCTTAGAATTAGGGATACAACCCTAATTAGTGAATAATAAATATAATTATCA TAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTAAAGCTCAACAATTATAACAAATCTAATACCA AATATTTATCTTCAATTCCTGATATAAATATTGGATTAATCTATTAAATTCATAGAAGAAATACTGCTAA TATGAGTAACAAGAAATATTTTCTCCTAGCATAATTTTATATCAGAACGAATAATTCACTGATAATTAAC AACCTATTAATGGATAAACATATAAATTAAAAACCCATTAATAAAATTGTTAGCCCAACACAGGTATGCA CTTAGGAAAGATTAAATGAATTAAAAGGAACTCGGCAAACACAAGCCCCGCCTGTTTACCAAAAACATCA CCTCTAGCATTATTAGTATTAGAGGCACTGCCTGCCCAGTGACATAGTTTAACGGCCGCGGTATCCTGAC CGTGCAAAGGTAGCATAATCACTTGTTCTCTAATTAAGGACTTGCATGAATGGCCACACGAGGGCTTAAC TGTCTCTTAATTCAAATCAGTGAAATTGACTTTCCTGTGAAAAGGCAGGAATGCTAAAATAAGACGAGAA GACCCTATGGAGCTTTAGTTTAAAATTTAACTGTAATGTAATTAAACCTAAAGGCATAAATATAACTTTA ATAATAATAAACTTTGGTTGGGGTGACCTCGGAGAACAAAAAATCCTCCGAATGATTTTAATCCTAGACT TACAAGTCAAAGTTCAATCACTTATTGATCCAGTAACTTAACTGATCAACGGAACAAGTTACCCTAGGGA TAACAGCGCAATCCTATTCAAGAGTTCATATCGACAATTAGGGTTTACGGACCTCGATGTTGGATCAGGA CATCCTAATGGTGCAACAGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTC AGACCGGAGTAATCCAGGTCGGTTTCTATCTATTAAAAGTATCTCCCAGTACGAAAGGACCAGAGAAACA AGGCCAACTAATATTCTAGAGCCTTATATCAAGTATAGATGATATAATCTTAATCTAGATTGATATTTAT ATAATAACCTTATTAAGCCCAAGAGAAGGGCTTGTTAGTGTGGCAGAGCCCGGTAAGTGCATAAAATTTA AGCTTTTATAGCCAGAGGTTCAAATCCTCTCTCTAACATATACTAATAATTAATATCTTATGCCTTATTA TTCCCATTTTATTAGCAGTAGCATTCCTTACATTAGTTGAACGAAAAGTATTAGGTTATATACAACTACG TAAAGGCCCTAATATCGTAGGACCTTTCGGCCTTCTTCAACCAATCGCTGATGCAGTAAAACTATTTACA AAAGAGCCAATTCTTCCCGTCTCATCTTCCATATCACTATTTATTATAGCCCCTATTTTAGCCATCACAT TAGCCCTAATATTATGAGTACCTCTTCCTATACCTAAATCACTAGTCAATATTAACTTAAGTTTATTATT TATTTTAGCACTTTCTAGTCTAGCAGTCTATTCCATTTTATGATCTGGATGAGCATCAAACTCAAAATAT GCACTAATTGGTGGTTTACGAGCAGTAGCCCAAACAATTTCCTATGAAGTAACATTAGCCATCATCCTAT TATCTCTTTTAATATTTAGTGGTTCTTTCTCACTCAATAACTTAATTATTGCACAAGAAAATTTATGATT ATTTATATCTACTTGACCCTTAGCAATAATATGATTTATCTCTACATTAGCCGAAACAAATCGAGCCCCC TTTGATTTAACAGAAGGTGAATCCGAATTAGTATCAGGCTTTAATGTAGAATATGCAGCAGGACCATTTG CACTATTTTTTCTAGCCGAATATGCTAATATTATTATAATAAATGCTTTAACTACAATTTTATTTTTAGC TCCCTCTAATAATGTTTTTTTACCTGAAATATTTACCCTAAAATTAATTCCCCTAATAATTTTAATAACA ATAATATTTTTATGAGTACGAGCATCTTATCCTCGATTTCGCTATGACCAATTAATACATCTATTATGAA AAAATTTTTTACCACTAACACTAGCTCTATGTATATGATACTCATCATTACCAATTACATTAGCAAGTTT TCCTCCTCAATAAGAAATATGTCTGATAAAAGAATTACTTTGATAGAGTAAATAATAGAGGTCTAAATCC TCTTATTTCTAGAGTAATAGGAGTCGAACCTACTCATAAGAATCCAAATTTCTTCGTGCTACCTAATTTC ACTATACCCTAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGATAATATCCAT CCCGTACTAGTCATGAACCCAATTTTAGCCTATTTCATTTACTATATATTAGTAATAGGTACAATTATAG TATTAATTAGTTCACATTGACTTTTAATCTGAGCAGGCTTTGAAATAAACTTAATAGCAATAATCCCAAT TATATTATATAATCAAAATCCTCGATCTACAGAATCTGCAATCAAATATTTTATAATTCAAACAACAGCT TCAATTATCTTTATAATATCAGTCTCAATTAATTTAATATTAACAGGACAATGAACTGTAATATATATTA ACAATAGTATACTATCTACAATTATTACAATTTCCATGTTAATAAAACTTGGAGCTGCTCCTTTCCATTT ATGACTCCCCGAAGTAGCCCAAGGACTTCATCTAAATTCCAGCATAATCCTTCTTACCTGACAAAAATTG CCCCTTATCTATTTATATTCACTTTATTCCACACTAAACTTCAATATTATAATTATTTCAGCTCTCCTAT CTATTGTATTAGGAGGATGAGGAGGACTAAATCAAACTCAACTACGAAAAATAATAGCCTTTTCATCAAT CGCTCATATAGGATGAATAATAGCAGTCTTATGTTATAATCCTAATATTATAATTTTAAACCTCTTTATT TACATAATTATAACCATCACATTATTTATAATTTTTAAGTATAATTCTTCAACCAACATCTCAAATTTAT CATTAATTTGTAATAAATCACCTATTACAGCCTCACTATTAGCACTCATATTTATATCCCTAGGAGCGCT ACCTCCACTAACAGGATTTCTACCAAAATGAATAGTAGCTCAAGAATTAATCAAAAATAATAACACAATA CTAGCACTAATTATATTAATATTTGCACTAATTAGTCTATTTTTCTATATACGATTAATTTATTCAACAT CATTAACTATATTTCCATCAACAAATAATATAAAAATATACTGATTATATGCAAATTCAAATAATTATTC TTTTATCACAATTATTTTTTCTATTATATCCATTATAATATTCCCACTCATACCCATTCTAATAAATCTT TATTAATAGGAATTTAGGTTAAAAGACCAAGAGCCTTCAAAGCCCTAAGTAGATATTAATATAAATCTAA TTCCTGAAGTTAAGAATCACAAGATTATATCTTATATCAATTGAATGCAAATCAACCACTTTTATTAAGC TAGATCCTCACTAGATTGACGGGCCTCTATCCCGTATAATTTTAGTTAACAGCTAAATACCAAGACTATT TGGTTTCAACCTACTTCTCCCGCCTTTTAAAAAGGAGAGAGGCGGGAGAAGCCCCGGCAGCAATTATATC TGCTTCTTAGAATTTGCAATTCAACATGTTAATACACTACAGGACTATGGTAAAAAGAGGCCTATTCTCT GTCTTTAGATTTACAGTCTAACACTTATATCTCAGTCATTTTACCTATGTTTATTTCTCGCTGACTTTTC TCTACAAATCATAAAGATATTGGAACTCTCTATCTATTATTTGGAGCTTGAGCAGGCATAGTAGGTACTT CACTCAGCTTACTAATTCGAGCTGAACTAGGACAACCAGGAGCTCTAATGGGTGATGACCAAATTTACAA CGTTGTTGTTACAGCCCATGCATTCGTCATAATCTTTTTTATAGTTATGCCTATTATACTTGGAGGTTTC GGAAACTGACTAGTACCACTTATAATTGGGGCCCCCGATATAGCTTTTCCCCGAATAAATAATATAAGCT TCTGACTTCTTCCCCCATCATTTTTACTTCTTCTCGCATCCTCTATAGTAGAAGCAGGAGTAGGAACAGG CTGAACTGTTTACCCCCCATTAGCTGGAAATATAGCACATGCAGGCTGCTCTGTTGACCTAGCTATTTTT TCACTTCACCTCGCCGGTGTTTCATCCATTTTGGGAGCAATTAATTTCATTACCACTATCATTAATATGA AACCACCAGCTATATCTCAATACCAAACTCCCTTATTTGTCTGATCCATTTTAATTACAGCAGTTCTTTT ATTATTAGCTTTACCTGTTCTAGCTGCCGGTATTACTATATTATTAACAGACCGAAATATTAATACAACG TTTTTTGACCCTGCTGGAGGAGGTGACCCTATTTTATATCAACATTTATTCTGATTTTTTGGCCACCCTG AAGTTTACATTTTAAATCATCCTGGATTTGGCATTATTTCCCACATTGTAACTTATTATTCAGGTAAAAA AGAACCCTTCGGTTATATAGGGATAGTTTGAGCAATAATATCAATTGGATTTTTAGGCTTTATCGTATGA GCCCACCATATATTTACAGTAGGATTAGACGTGGATACCCGAGCATACTTTACATCTGCAACTATAATTA TTGCTATTCCTACTGGAGTAAAAGTATTCAGTTGATTAGCAACATTACATGGAGGACATATTAACTGAGC ACCAGCACTAATATGAGCACTAGGCTTCATTTTTCTATTTACTGTAGGAGGCCTTACAGGGATTGTATTA GCTAATTCATCATTAGATATTGTCCTCCATGATACTTACTACGTAGTAGCCCATTTCCATTATGTTTTAT CTATAGGAGCCGTATTTGCAATTATTGGCGGATTTATTCACTGATTTCCTCTACTTACAGGATATACATT AAATGATACATGAGCTAAAATTCATTTCATCATTATATTTATAGGAGTAAATATTACCTTTTTTCCTCAA CATTTTCTTGGGTTAGCAGGAATACCACGACGATACTCCGACTACCCTGATGCCTACACAACATGAAATA CAGTATCATCAATAGGATCATTTATTTCACTTACAGCTGTTATACTAATAGTATTCTTAGTCTGAGAAGC ATTTGCCGCAAAACGAGAAGTATTTAAAGTTGAATTTACAAATACAAATATTGAATGACTTCATGGATGT CCTCCTTCATATCATACATTTGAAGAACCAACATATGTTTTAGCCAAATAAGAAAGGAAGGAATTGAACC CCCAAAAATTGGTTTCAAGCCAATCTTATAACCTTTATAACTTTCTCTAAACAAGAGGAGTTAGTATTAA TAAATACATTACTTTGTCAAAGTAAAATTAAAGGTTAGAATCCTTTTCTCCTCTTATGGCTTATCCCTTA GAATTAGGTTTACAAGACGCCACTTCTCCCATCATAGAAGAACTTATATATTTTCATGATCATACTTTGA TAATTGTATTTTTAATTAGTTCATTAGTTTTATACATTATCTCCGCTATACTTACCACAAAATTAATACA TACTAGTACTGTAGATGCTCAAGAAATTGAAACTGTATGAACTATTTTACCTGCAGTTATTCTCATTTTA ATTGCTTTACCTTCCTTACGCATTTTATACATGATAGATGAAATAAATGATCCCTCACTTACAATAAAAA CAATAGGCCATCAATGATATTGAAGTTATGAATATTCTGACTTTGAAGATTTATCTTTTGATTCCTATAT AATTCCAACCTCAGATCTCAATCCAGGTATATTTCGACTTTTAGAAGTAGATAATCGAGTTATTCTTCCC ACAGATATTACAGCCCGTATCCTAATTTCATCAGAAGATGTTCTTCACTCCTGAGCCATTCCCTCATTAG GAATTAAAACAGATGCAATTCCTGGACGACTTAATCAAGCCACTTTAATAATCACCCGTCCTGGTTTATA TTACGGACAGTGCTCAGAAATCTGTGGAGCTAATCATAGTTTCATACCCATTACTATTGAAGCAATTCCT CTCAATCAATTTGAAAAATGATCATTATCAATAATTTAATCACTAAGAAGCTAGTAGCATTAACCTTTTA AGTTAAAGATAGGAGACCTTAAATTCCCTTAGTGTAATGCCTCAATTAGACACATCTTCATGATTTATAA TAATTTTAACTATAATTTTTACCCTTTTTATTATTATACAACTAAAAATTTCTTCACATAAAATATTTAT TAAACCAGAATCAGAAGATTATATTTTTTCTAGCTCTTCCAAACCATGAGAACACAAATGAACGAAAATT TATTTGCCTCTTTTATTATCCCTACATTAATAGGCCTTCCAATAACTATTCTAATCATTATGTTTCCTAG TTTATTATTTATTAAACATACACGATTAATTACTAATCGAATTATAGCATTACAACAATGAATAATCAAA AATATTACTAAACAAATAATGAGCATTCATAGTATTAAAGGCCAAACCTGAACTCTATTATTAATTTCAC TAATTATATTTATTGCATCAACAAATATTTTAGGTCTCTTACCCCACACATTTACACCAACAGCTCAACT TTCAATAAATTTAGGTATAGCAATTCCTTTGTGAGCAGGAACTGTTATTTTAGGCTTTCGCCTAAAATTA AAATCATCACTAGCCCACTTTTTACCACAAGGAACACCACTACCTCTTATTCCTATACTTATTATTATTG AAACAATTAGTCTATTTATTCAACCTATAGCTCTAGCTGTTCGATTGACTGCCAATATCACAGCAGGACA TTTATTAATTCACTTAATCGGAAGCGCAACACTTAACCTCATTACTATTTATACTTCTACAGCTATAATT ACATTTATTATTCTCCTCCTATTGACTATTTTAGAAATTGCTGTAGCTCTAATTCAAGCTTATGTATTTA CACTTTTAGTCAGTCTTTACTTACATGACAATTCATAATGAATCACCAAATACATGCCTATCACATAGTT AACCCCAGCCCCTGACCATTAACTGGAGCCCTATCTGCCCTACTAATAACTTCTGGCCTAATAATGTGAT TCCATTTTAATTCTATATTTCTATTAATCTTAGGCCTAACTACTAATTGTCTTACTATATATCAATGATG ACGAGATATTATTCGAGAAGGAACATTTCAAGGCCATCATACCCCTATCGTACAAAAAGGCTTACGTTAT GGCATAGTATTATTTATTATTTCAGAAGTATTATTTTTTACAGGCTTTTTCTGAGCATTCTATCATTCCA GCCTAGTTCCTACCACAGAACTAGGAGGTTATTGACCTCCTGCCGGAGTAAAACCACTTAATCCACTCGA AGTTCCCCTACTCAATACAGCAGTTCTTCTAGCCTCTGGAGTATCAGTCACATGAGCCCACCATAGTATT CTCGAAAAAAATCGCATCAGTGCTATTCAAGCTTTAACTATTACAATCAGTCTAGGCTTATATTTCACAC TACTTCAAGCCATAGAATATTATGAAGCACCCTTTACAATTGCAGATAGTATTTATGGATCTACATTCTT TATAGCTACAGGATTTCACGGCTTGCATGTAATTATTGGCTCATCTTTCCTTATTGTCTGCCTAATACGT CAACTAAAATTCCATTTTACATCTAATCACCATTTTGGATTTGAAGCTGCAGCTTGATATTGACACTTTG TAGACGTTGTTTGACTATTTCTTTATGTGTCTATTTATTGATGAGGATCATACCCTTTTAGTATTACACA CAACTGTACAATTGACTTCCAATCAATTAGGCTCAATATTTTTTGAGAAAGGGTAATAACTATAACAATT ATAATTTTAACAAACATTATTTTAGCCTCTATTCTAATGATTATTGCATTTTTACTACCACAACTCAATT CATATGTAGAAAAAATCAGCCCTTATGAATGCGGATTTGACCCTTTAGGATCAGCACGTCTGCCTTTCTC TATAAAATTTTTCCTAGTAGCGATTACATTCCTATTATTTGACTTAGAAATTGCTTTACTTTTACCAATT CCTTGACTTATAAATTCATTAAAAGCAACAACTTCTATCATAGTTGTTATTGCTCTTATCATAGCATTAG CCCTTAGTCTAGCCTATGAATGAATAAAAGGCGGACTAGAATGAAGTGAATAAGGTAATTAGTTTAAATT AAAATTAATGATTTCGACTCATTAGATTATGATTAGAATCATAATTACCAAATGTCTATTGTGTATATAA ATGTAATATTAGCATTCATAATTGCTCTAATTGGTACATTACTCTATCGTCACCATTTAATATCTTCATT AATATGTTTAGAAGGTATAATATTAGCTATATATATTTTTATCTCCCTCATTTCACTTAATATACACTTC ACCACAATATACATAGTTCCTCTTATTATTCTAGTTTTTGCTGCCTGTGAAGCAGCATTAGGTTTAGCTT TACTAGTAAAAATATTTAATTATTACGGCAATGATTATGTACAAAACCTAAATTTATTAAAGTGTTAAAA ATAATTTTATCAACTGTTATACTTATCCCACTCACATGATTATCTAAAAATAAATATATATGAATTAATA TTACTCTATACAGTTTTTTAATCGCACTAACGAGCTTAACCTATATGAATAAACAACATTATATAATAAT AAATACTTCTATTACTTTTTTTACAGACAATTTATCAACCCCACTACTTATTTTAACTACCTGACTTCTC CCTTTAATAATTATTGCTAGTCAACATCACCTTCAAAAAGAAAATTTAACTCATAAAAAACTATTTATCT CTATACTAATTTTATTACAAATTTTATTAATTATAACATTTACAGCATCAGAAATACTTTTATTTTACAT TTTATTTGAAGCTACTTTAATTCCTACACTAATTATCATTACACGATGAGGAAATCAAATTGAACGTCTT AATGCTGGATATTACTTTCTATTTTATACCCTAGTAGGATCTTTACCTTTATTAGTAGCGTTACTATATT TAAAAGAGATAAATGGTTCTATACATTTTATTTTCATTAAATTAAATACAGATTACTACTCCAATAACTG ATCTAATTCTCTCTTATGATTATCATGTACAATAGCATTTCTAGTAAAAATACCTTTATATGGAATTCAC CTATGACTTCCGAAAGCTCACGTCGAAGCTCCAATCGCAGGATCAATAATTCTAGCCGCTATCTTATTAA AATTAGGAGGTTACGGAATAATACGAATTAATATATTAACTGAACCACTTACAAATATTATATATTATCC ATTTATTATTCTTTCACTATGAGGCATAATCATAACTAGTTGTATTTGTCTTCGTCAAACCGATTTAAAA TCATTAATTGCTTATTCATCAGTAAGCCACATAGCACTTGTTATTGCAGCAATTATAATTCAAACTCCTA TAAGTTATATAGGAGCTACCACTTTAATAATTGCTCATGGCCTAACTTCCTCTCTATTATTTTGTCTAGC AAACACTAATTATGAACGAACCCATAGCCGCACTATACTCCTAACTCGAGGCTTACAAATTATATTACCT TTAATAACAACATGATGATTAATTGCTAGTTTAAATAACTTAGCTCTTCCACCAACTATTAACCTAATTG GTGAATTTCTAATTTTAATATCGCTATATTCTTGAGCAAATTTTTCTATCATTTTAACAGGATTTAACAT GATAATTACAGTATTATATACTTTATATATGATTATTACAACACAACGAGGACTACCTTCACATCATATT AAAAGTATTAAACCATCATTCACTCGAGAAAATACTCTTATAATACTACATATTATTCCTCTAATTTTAT TAATCATTAATCCTTATTTAATTTTAGGTAATACTTTATGTAAATATAGTTTATTAAAACATTAGATTGT GAATCTAAAATCAGAGCACTAACCTCTTATTTACCGAGAAAGATTATAAGAACTGCTAATTCTTAGTTCC ACACTTAATACATGTGGCTTTTTCACTTTTTAGAGGATGACAGTAATCCATTGGTCTTAGGAACCAAAAA ATTGGTGCAACTCCAAATAAAAGTATAGATTATGATAGTATCTATTATACTGACTACACTAGTAGTAATA AATATACCCCTTATTTTATCTACTTATCCAAATTATAATATACAAAATTTTCCTACTCACGTAAAATCAG CTGTAAAAACTGCTTTCACTCTATCACTAATCCCCACAATTATTTTTATTATATTAGATCAAGAAATAGT TACTTTTAACTGACATTGAATAACAATTCAAAGTACAAAAATTTTTATAAGCTTTAAATTAGATTATTTC TCTATTTTATTTTTACCAACAGCCCTATTTGTCACTTGATCTATTTTAGAGTTCTCCTTATGATATATAG CCTCAGATCCAAATATTAATAAATTCTTCAAATATCTTCTTATGTTTTTAACAACAATATTAATCTTAAC TACCGCTAATAATTTATTTCAACTCTTTATTGGCTGAGAAGGAGTGGGTATTATATCATTTCTACTCATT GGCTGATGACACGGACGAACAGACGCTAACACAGCAGCTCTCCAAGCTATATTATACAACCGCATTGGAG ATATTGGATTTATTTTAATAATAGTTTGACTTATATTAAATTGTAACTCTTTAGATATTCAACAAATTTT TATAACTAAAATTAATTCTAATATTCCTTTAATAGGCCTACTATTAGCTGCCGCAGGCAAATCAGCACAA TTCGGATTACATCCTTGACTCCCAGCCGCTATAGAAGGACCCACACCTGTATCTGCCTTATTACACTCAA GCACTATAGTTGTAGCCGGAATTTTCCTAATAATTCGATTTCACCCTATATTATCAAATAATCATACAAT CTTAACAATAACTATATGCTTAGGCGCTATAACTACTTTATTCACAGCTATATGTGCTTTAACACAAAAT GATATTAAAAAAATTATTGCTTTTTCAACATCCAGTCAATTAGGCCTGATAATAGTTACAATTGGAATTA ATCAACCTTATATAGCCTTCCTACATATTTGTACCCACGCATTCTTCAAAGCTATACTTTTCATATGTTC AGGCTCAATTATCCATAATATAAAAGATGAACAAGATATTCGCAAAATAGGGGCTATTTATAAAACTTTA CCACTCACATCAACCGCCCTGATCATCGGAAATATAGCTTTAACAGGCATTCCATTCTTATCAGGATTTT ACTCAAAAGATCTAATTATTGAAGCCATTAACACGTCGTATACAAACGCCTGAGCCCTAACAATAACAAT AATAGCAACCTCAATAACCGCTGTTTACAGCACCCGAATAATTATTATAGTTTTACTTAATAACCCACGA TACAATTCTATACTTACTATAAATGAAAACAATATTAACTTAAATAATTCAATTAAACGTTTAATAATCG GAAGTATTTTTGCAGGGTTTATATTAACACATTATATTACCCCAATATATGTTCCACCAATAACTATACC TCTATTTATAAAAATAATAGCCTTAATCATCACTCTCACTGGCTTTATCGTAGCGCTAGACTTAAGTATA ATAACTCATCATCTCAAAATAATACATAACACTCATAGCTTCATATTCTCAAACATACTAGGCTACTTTA CAAACATTTTACACCGTCAACCCCCAACATTAACTTTAAAATATAGCCAAAATTCATCTAATTTACTATT AGATCAGTCCTGGTATGAATATAATTTACCAATAATATTAATAAATTTTCACAAACAAATATCTAAATAT ATATCAAATCAAAATGGCTTAATCAAATTATACTTTATATCATTCTTTATTTCCATATTAATTATATTAA TTTTCACCTTTAGTTTCCACGAGTAATTTCTATAATAATAATTACACAAAAAACTAATGATCATCCAGAA ACTACCACCAATCAAGTACCATAACTATATAAAGCAGTAACCCCTATAGCTTCTTCACTAAAAAAACCAG TATCACCAGTATCAAAAATTACCCAATCACCTTCACTATTAAAATCTAAAGCAAAATTTAAATTAAATTT ATATCCCATAATTAAGTAACCCATAAATAATAGTTCACTTATACAACCCAACAACAAAGAGCTTAATAGA ACCTTATTTGATGATCATACCTCAGGGTACTCCTCTATAGCTATAGCAGCTGTATAACCAAATACAACTA ATATACCACCTAAATAAATTAAAAATACTAATAATCCTAAAAAAGAACCCTCACAACTTAATACTAAACC ACAACCAAAACCCCCACTTACAATTAAACCTACCCCACCATAAATAGGTGAAGGTTTAGAAGAAAACCCA ATGAATCCTACCACAAAAATTAAACTAAATAATAATACTAGATAAATTATCATAATTCTTGCACGACAAA TTTCGTGACCCATGATATGAAAAATCATTGTTGTAATTCAACTACAAGAACATAATGCTTAATATTCGAA AAAACCACTCATTAATAAAGATCATTAATAATTCTTTCATTGACCTCCCTACCCCATCAAATATTTCTTC TTGATGAAATTTTGGTTCATTATTAGGTCTATGTTTAATTACTCAAATCATTACAGGTTTATTTCTAGCT ATACACTATACATCAGACACACTTACAGCATTCTCTTCAGTTACACACATCTGCCGAGACGTAAATTATG GTTGATTAATCCGATATTTACACGCTAACGGTGCCTCAATATTTTTTATATGCCTTTTTCTACACATCGG CCGAGGCATTTATTACGGATCCTACTTATTTAAAGAAACATGAAATATAGGGATTATCTTACTAATTACC ACTATAGCCACCGCCTTTATAGGTTATGTTCTACCATGAGGCCAAATATCTTTCTGAGGTGCTACCGTAA TCACAAACCTATTATCCGCTATTCCTTACATCGGAACAGATTTAGTACAATGAATTTGAGGGTCATTTTC AGTAGATAAAGCTACTTTAACCCGATTTTTCGCTTTCCACTTCATTCTTCCATTCATAATTGTAGCACTA ACAATAGTACACCTATTATTTCTTCATGAAACAGGCTCAAACAATCCCACAGGAATCATTTCAGAATCAG ACAAAATTCCATTTCACCCCTACTATACCATAAAAGATATCCTAGGTATAATTTCTCTATTATTAATCTT AATAACATTAACATTATTTTCCCCAGACTTATTAGGTGACCCAGACAATTATACTCCAGCCAATCCTCTA AACACCCCACCCCATATCAAACCTGAATGATATTTTTTATTTGCTTACGCAATTCTTCGATCGATCCCCA ATAAATTAGGAGGAGTCCTAGCACTACTCATATCTATCCTTATTTTATTCTTTATACCCCTATTGCATAC CTCAAAACAACGAAGCATAATTTTTCGACCCCTAAGCCAATGTACATTCTGACTTCTAACCTCAGACTTA TTAATTTTAACCTGAATCGGAAGCCAACCTGTAGAAGACCCATATATTATTATTGGCCAACTAGCATCAA TTCTTTATTTCCTCATTATCCTTTTCCTAATACCCGTAATAGGACTTATTGAAAATAGCATATTTAAATG AAGAGTCTTTGTAGTATATTTTAATATACTAGTTTTGTAAACCAGAGAAGAGAATGTATAAACTCCTAAG ACACTCAAGGAAAAGACTAGAATCTTACCATCAACACCCAAAGTTGACATTCTACTTAAACTATTCCTTG AATAACTACATATATATATAATATTCATATTATTGAATTAAGTATAATAAAAGCATAATTTAATATTTAT GATATAACTCATTAAAATTCATGTACACAAGTTAAAAAATTATACAATGTACTAAATCATGTTCTCATTA AAATTTATGTATAATTAGCATATTTATGTACATTAAACTAAAATATTACATAATACATTAAATTATATTC TTATTAAAACTTATGTACAACTAGCATATATACATGTACATTAAACTAAAATATTACATAATACATTAAA TTATATTCTTATTAAAACTTATGTACAACTAGCATATATACATGTACATTAAACTAAAATATTACATAAT ACATTAAATTATATTCTTATTAAAACTTATGTACAACTAGCATATATACATGTACATTAAACTAAAATAT TACATAATACATTAAATTACAAACTAACATAAAATTTATTAAAACATGGATATTTAAACCAATTATAGTT TATTAATATTACATAGTACATATAATGTATATCGTACATAGTACATCCTATTAATAAATATTCTTTTCCA CCCGCATATCACCTCCATTAGGTTATTTCTTAATCTACCAACTCACGTGAAACCAACAACCCTTGTAAAA AGTATCCCTCTCCTCGCTCCGGGCCCATTTAACTTGGGGGTTTCTAACTATGTATTTCACAAGACATCTG GTTCTTTCTTCAGGACCATCTCACCTAAAATCGCCCACTCTTTCCTCTTAAATAAGACATCTCGATGGAT TAATGTCTAATCAGCCCATGCCGAAGCATAACTGTGGTGCCATGCCCTTGGTATTTTTTTTTTTTGGGGA TGCTTGGACTCACCTAGGCCGCCGTGGCCCTAACACAATTGCATAAATTGTAGCTGGACTTAACGTGTAC CTCCGGTATCCTCATAATGGTTAGCATGGAATATTTAATTAATGATATAAAGAAATTCTTTTAATGGTTA CAGGACAAATTATTAATGAATAAATAGATATATTGTGAAAAACTTTCAAGCACATAATAATTAATGCTTA AAATAGACAATATAATTAATGTTAGTAAGACATAATTCTATTCTATAATAAGATCCCCCCCTTCACACGT ATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACAC GTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATAC ACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTAT ACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGTATACACGT ATACGCACGCGCCTTCAAAAAATTAATTTTTTCTAGCTCAAACCCCCCTTACCCCCCTTAACTGCAGACA AGCGAAATTCTTAGCAAACCCCAAAACCAAGAAAAGTATGCAGCATATATATATATATATATATTATGTA ATAAATAAATTTCCTCAATTGCTTATGAGTCTCACAAAATAATTTTTCATAAATTAATTAGTCAGTATAT ATATATATAAATTTTTAATTAACATTTACAACAATTTAAACTAATTATATGCTATTTTCCCTAATTCATA ATAATATAAATTTTATTATTATATAATATATATATATATATATACTTATAATATTTAACTATTAATTATT TATTAAATTTACCTAAATTAATTAAGATAGATCTAGTTTATCTATATTCCTTATAATATAAAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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