Stats for family Hirundinidae
Species in family:
| Stats for total mtDNA (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 46.2 | 53.8 | 5783 | 2589 | 4253 | 5493 | 9.1 |
| Cecropis daurica | 46.5 | 53.5 | 5768 | 2570 | 4135 | 5476 | 9.0 |
| Tachycineta bicolor | 46.4 | 53.6 | 5812 | 2519 | 4116 | 5498 | 12.1 |
| Stats for total protein-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.3 | 52.7 | 3937 | 1445 | 2617 | 3380 | 9.1 |
| Cecropis daurica | 47.4 | 52.6 | 3919 | 1472 | 2588 | 3399 | 9.0 |
| Tachycineta bicolor | 47.3 | 52.7 | 3976 | 1401 | 2581 | 3421 | 12.1 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 43.3 | 56.7 | 393 | 272 | 371 | 501 | 9.1 |
| Cecropis daurica | 42.7 | 57.3 | 394 | 265 | 370 | 514 | 9.0 |
| Tachycineta bicolor | 43.1 | 56.9 | 391 | 270 | 368 | 506 | 12.1 |
| Stats for total rRNA-coding genes (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 46.9 | 53.1 | 670 | 538 | 516 | 854 | 9.1 |
| Cecropis daurica | 46.3 | 53.7 | 666 | 526 | 523 | 859 | 9.0 |
| Tachycineta bicolor | 47.0 | 53.0 | 674 | 538 | 510 | 854 | 12.1 |
| Stats for ATP6 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 45.5 | 54.5 | 238 | 73 | 163 | 210 | 9.1 |
| Cecropis daurica | 45.8 | 54.2 | 245 | 68 | 160 | 211 | 9.0 |
| Tachycineta bicolor | 45.0 | 55.0 | 244 | 64 | 158 | 218 | 12.1 |
| Stats for ATP8 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 45.8 | 54.2 | 65 | 12 | 41 | 50 | 9.1 |
| Cecropis daurica | 41.1 | 58.9 | 58 | 11 | 44 | 55 | 9.0 |
| Tachycineta bicolor | 43.5 | 56.5 | 64 | 9 | 42 | 53 | 12.1 |
| Stats for COX1 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 48.4 | 51.6 | 491 | 259 | 373 | 428 | 9.1 |
| Cecropis daurica | 48.2 | 51.8 | 488 | 259 | 372 | 432 | 9.0 |
| Tachycineta bicolor | 48.5 | 51.5 | 497 | 255 | 366 | 433 | 12.1 |
| Stats for COX2 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.7 | 52.3 | 224 | 102 | 145 | 213 | 9.1 |
| Cecropis daurica | 46.2 | 53.8 | 212 | 104 | 159 | 209 | 9.0 |
| Tachycineta bicolor | 45.6 | 54.4 | 213 | 99 | 162 | 210 | 12.1 |
| Stats for COX3 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 49.5 | 50.5 | 262 | 126 | 189 | 207 | 9.1 |
| Cecropis daurica | 47.8 | 52.2 | 251 | 124 | 201 | 208 | 9.0 |
| Tachycineta bicolor | 50.1 | 49.9 | 268 | 125 | 183 | 208 | 12.1 |
| Stats for CYTB (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 48.2 | 51.8 | 401 | 150 | 277 | 315 | 9.1 |
| Cecropis daurica | 47.7 | 52.3 | 398 | 147 | 277 | 321 | 9.0 |
| Tachycineta bicolor | 47.5 | 52.5 | 396 | 147 | 279 | 321 | 12.1 |
| Stats for ND1 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.4 | 52.6 | 327 | 137 | 245 | 269 | 9.1 |
| Cecropis daurica | 48.3 | 51.7 | 331 | 141 | 230 | 276 | 9.0 |
| Tachycineta bicolor | 47.3 | 52.7 | 333 | 130 | 239 | 276 | 12.1 |
| Stats for ND2 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 44.3 | 55.7 | 361 | 100 | 260 | 320 | 9.1 |
| Cecropis daurica | 47.1 | 52.9 | 377 | 113 | 227 | 323 | 9.0 |
| Tachycineta bicolor | 45.8 | 54.2 | 374 | 103 | 245 | 319 | 12.1 |
| Stats for ND3 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.3 | 52.7 | 121 | 45 | 86 | 99 | 9.1 |
| Cecropis daurica | 47.3 | 52.7 | 123 | 43 | 87 | 98 | 9.0 |
| Tachycineta bicolor | 47.6 | 52.4 | 128 | 39 | 81 | 103 | 12.1 |
| Stats for ND4 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.2 | 52.8 | 497 | 153 | 309 | 419 | 9.1 |
| Cecropis daurica | 47.7 | 52.3 | 495 | 162 | 302 | 419 | 9.0 |
| Tachycineta bicolor | 46.7 | 53.3 | 498 | 145 | 304 | 431 | 12.1 |
| Stats for ND4L (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 47.1 | 52.9 | 105 | 35 | 74 | 83 | 9.1 |
| Cecropis daurica | 48.1 | 51.9 | 102 | 41 | 76 | 78 | 9.0 |
| Tachycineta bicolor | 49.2 | 50.8 | 111 | 35 | 69 | 82 | 12.1 |
| Stats for ND5 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 46.5 | 53.5 | 639 | 207 | 404 | 568 | 9.1 |
| Cecropis daurica | 47.0 | 53.0 | 645 | 210 | 401 | 562 | 9.0 |
| Tachycineta bicolor | 46.6 | 53.4 | 640 | 208 | 404 | 566 | 12.1 |
| Stats for ND6 (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 49.5 | 50.5 | 209 | 48 | 55 | 207 | 9.1 |
| Cecropis daurica | 47.8 | 52.2 | 197 | 51 | 56 | 215 | 9.0 |
| Tachycineta bicolor | 49.5 | 50.5 | 213 | 44 | 53 | 209 | 12.1 |
| Stats for 12S rRNA gene (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 48.5 | 51.5 | 254 | 218 | 200 | 301 | 9.1 |
| Cecropis daurica | 48.4 | 51.6 | 263 | 208 | 195 | 307 | 9.0 |
| Tachycineta bicolor | 49.0 | 51.0 | 258 | 219 | 197 | 299 | 12.1 |
| Stats for 16S rRNA gene (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tachycineta thalassina | 45.9 | 54.1 | 416 | 320 | 316 | 553 | 9.1 |
| Cecropis daurica | 45.0 | 55.0 | 403 | 318 | 328 | 552 | 9.0 |
| Tachycineta bicolor | 45.9 | 54.1 | 416 | 319 | 313 | 555 | 12.1 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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