Stats of ATP6 for family Clupeidae

Species in family:
Alosa alosa
Alosa pseudoharengus
Alosa sapidissima
Clupea harengus
Clupea pallasii
Clupeonella cultriventris
Dorosoma cepedianum
Dorosoma petenense
Harengula jaguana
Potamalosa richmondia
Sardina pilchardus
Sprattus sprattus
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Stats for ATP6 (group size: 12 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.4 - 49.3% 50.7 - 55.6% 203 - 219 93 - 125 189 - 211 153 - 184 3.0 - 22.0
Median 46.1% 54.0% 213 103 196 174 10.0
Average ± stdev 46.3 ± 1.4% 53.7 ± 1.4% 212 ± 4 104 ± 9 196 ± 5 170 ± 9 10.2 ± 5.8
Coefficient of variation 0.03 0.03 0.02 0.09 0.03 0.05 0.57
Pearson correlation
coefficient with log10MLS		 -0.11 0.11 0.21 -0.20 -0.10 0.19 -
Pearson p-value
(two tailed)		 7.31E-01 7.31E-01 5.19E-01 5.36E-01 7.49E-01 5.60E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.