Stats for family Equidae
Species in family:
| Stats for total mtDNA (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.7 - 42.1% | 57.9 - 58.3% | 4666 - 4819 | 2142 - 2236 | 4221 - 4312 | 5286 - 5394 | 30.1 - 57.0 |
| Median | 42.0% | 58.1% | 4754 | 2189 | 4259 | 5358 | 33.2 |
| Average ± stdev | 41.9 ± 0.2% | 58.1 ± 0.2% | 4734 ± 57 | 2182 ± 31 | 4258 ± 27 | 5347 ± 37 | 38.3 ± 10.1 |
| Coefficient of variation | 0.00 | 0.00 | 0.01 | 0.01 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.70 | -0.68 | 0.54 | 0.87 | 0.83 | 0.42 | - |
| Pearson p-value (two tailed) |
1.22E-01 | 1.38E-01 | 2.69E-01 | 2.57E-02 | 4.04E-02 | 4.11E-01 | - |
| Stats for total protein-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.5 - 42.7% | 57.3 - 57.5% | 3449 - 3495 | 1339 - 1377 | 2929 - 2973 | 3521 - 3566 | 30.1 - 57.0 |
| Median | 42.7% | 57.4% | 3472 | 1369 | 2964 | 3547 | 33.2 |
| Average ± stdev | 42.6 ± 0.1% | 57.4 ± 0.1% | 3470 ± 17 | 1358 ± 15 | 2955 ± 17 | 3547 ± 15 | 38.3 ± 10.1 |
| Coefficient of variation | 0.00 | 0.00 | 0.00 | 0.01 | 0.01 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.55 | 0.55 | -0.82 | 0.70 | 0.53 | -0.29 | - |
| Pearson p-value (two tailed) |
2.60E-01 | 2.60E-01 | 4.74E-02 | 1.19E-01 | 2.81E-01 | 5.82E-01 | - |
| Stats for D-loop (group size: 3 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.6 - 38.3% | 61.7 - 62.4% | 332 - 341 | 235 - 239 | 412 - 421 | 522 - 527 | 30.1 - 57.0 |
| Median | 37.8% | 62.3% | 336 | 237 | 420 | 524 | 33.2 |
| Average ± stdev | 37.8 ± 0.3% | 62.2 ± 0.3% | 335 ± 3 | 236 ± 1 | 417 ± 3 | 524 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.01 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.76 | -0.76 | 0.86 | 0.34 | -0.73 | 0.38 | - |
| Pearson p-value (two tailed) |
7.91E-02 | 7.91E-02 | 2.61E-02 | 5.13E-01 | 1.03E-01 | 4.56E-01 | - |
| Stats for total rRNA-coding genes (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.4 - 40.1% | 59.9 - 60.6% | 576 - 588 | 431 - 434 | 592 - 609 | 934 - 939 | 30.1 - 57.0 |
| Median | 39.7% | 60.4% | 583 | 433 | 605 | 936 | 33.2 |
| Average ± stdev | 39.7 ± 0.2% | 60.3 ± 0.2% | 581 ± 4 | 432 ± 0 | 602 ± 5 | 936 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.00 | 0.01 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.48 | 0.48 | -0.29 | -0.62 | 0.50 | 0.68 | - |
| Pearson p-value (two tailed) |
3.37E-01 | 3.37E-01 | 5.73E-01 | 1.86E-01 | 3.15E-01 | 1.35E-01 | - |
| Stats for ATP6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.8 - 43.3% | 56.7 - 59.2% | 203 - 214 | 74 - 81 | 176 - 189 | 210 - 217 | 30.1 - 57.0 |
| Median | 41.1% | 59.0% | 205 | 75 | 186 | 216 | 33.2 |
| Average ± stdev | 41.4 ± 0.9% | 58.6 ± 0.9% | 206 ± 3 | 75 ± 2 | 184 ± 4 | 214 ± 2 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.77 | -0.77 | 0.78 | 0.67 | -0.82 | -0.42 | - |
| Pearson p-value (two tailed) |
7.39E-02 | 7.39E-02 | 6.77E-02 | 1.46E-01 | 4.33E-02 | 4.04E-01 | - |
| Stats for ATP8 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 33.8 - 35.8% | 64.2 - 66.2% | 51 - 54 | 16 - 20 | 53 - 57 | 78 - 80 | 30.1 - 57.0 |
| Median | 34.8% | 66.2% | 53 | 18 | 55 | 79 | 33.2 |
| Average ± stdev | 34.5 ± 0.8% | 65.5 ± 0.8% | 52 ± 0 | 17 ± 1 | 54 ± 1 | 79 ± 0 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.08 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.52 | -0.52 | -0.50 | 0.88 | -0.05 | -0.87 | - |
| Pearson p-value (two tailed) |
2.91E-01 | 2.91E-01 | 3.15E-01 | 2.01E-02 | 9.23E-01 | 2.44E-02 | - |
| Stats for COX1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.3 - 43.8% | 56.2 - 56.7% | 420 - 423 | 247 - 254 | 439 - 445 | 426 - 436 | 30.1 - 57.0 |
| Median | 43.5% | 56.6% | 423 | 249 | 444 | 432 | 33.2 |
| Average ± stdev | 43.5 ± 0.2% | 56.5 ± 0.2% | 422 ± 1 | 249 ± 2 | 442 ± 2 | 431 ± 3 | 38.3 ± 10.1 |
| Coefficient of variation | 0.00 | 0.00 | 0.00 | 0.01 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.42 | -0.42 | -0.70 | 0.75 | -0.19 | -0.15 | - |
| Pearson p-value (two tailed) |
4.04E-01 | 4.04E-01 | 1.18E-01 | 8.58E-02 | 7.23E-01 | 7.76E-01 | - |
| Stats for COX2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.7 - 43.6% | 56.4 - 58.3% | 191 - 205 | 89 - 97 | 167 - 176 | 219 - 227 | 30.1 - 57.0 |
| Median | 42.1% | 57.9% | 196 | 94 | 172 | 223 | 33.2 |
| Average ± stdev | 42.3 ± 0.7% | 57.7 ± 0.7% | 196 ± 4 | 93 ± 2 | 171 ± 2 | 222 ± 2 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.20 | 0.20 | -0.66 | 0.73 | 0.61 | -0.27 | - |
| Pearson p-value (two tailed) |
7.08E-01 | 7.08E-01 | 1.56E-01 | 9.68E-02 | 1.96E-01 | 6.04E-01 | - |
| Stats for COX3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.3 - 47.1% | 52.9 - 54.7% | 239 - 249 | 116 - 122 | 202 - 211 | 211 - 218 | 30.1 - 57.0 |
| Median | 46.6% | 53.6% | 245 | 120 | 209 | 213 | 33.2 |
| Average ± stdev | 46.3 ± 0.7% | 53.7 ± 0.7% | 244 ± 3 | 119 ± 2 | 207 ± 3 | 213 ± 2 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.68 | 0.68 | -0.78 | -0.31 | 0.69 | 0.45 | - |
| Pearson p-value (two tailed) |
1.35E-01 | 1.35E-01 | 6.72E-02 | 5.56E-01 | 1.31E-01 | 3.67E-01 | - |
| Stats for CYTB (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.6 - 45.6% | 54.4 - 55.4% | 367 - 373 | 141 - 151 | 298 - 303 | 318 - 329 | 30.1 - 57.0 |
| Median | 45.4% | 54.6% | 370 | 147 | 302 | 325 | 33.2 |
| Average ± stdev | 45.3 ± 0.4% | 54.7 ± 0.4% | 369 ± 2 | 146 ± 3 | 300 ± 2 | 323 ± 3 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.31 | -0.31 | -0.27 | 0.52 | 0.11 | -0.39 | - |
| Pearson p-value (two tailed) |
5.50E-01 | 5.50E-01 | 6.01E-01 | 2.89E-01 | 8.30E-01 | 4.42E-01 | - |
| Stats for ND1 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.9 - 43.4% | 56.6 - 58.1% | 290 - 302 | 108 - 113 | 249 - 261 | 293 - 298 | 30.1 - 57.0 |
| Median | 42.5% | 57.7% | 298 | 109 | 255 | 297 | 33.2 |
| Average ± stdev | 42.4 ± 0.5% | 57.6 ± 0.5% | 296 ± 3 | 109 ± 1 | 254 ± 3 | 296 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | 0.36 | 0.54 | -0.35 | -0.35 | - |
| Pearson p-value (two tailed) |
3.29E-01 | 3.29E-01 | 4.79E-01 | 2.70E-01 | 5.01E-01 | 4.94E-01 | - |
| Stats for ND2 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.4 - 40.5% | 59.5 - 61.6% | 311 - 331 | 88 - 95 | 252 - 270 | 362 - 371 | 30.1 - 57.0 |
| Median | 40.2% | 59.9% | 330 | 90 | 258 | 367 | 33.2 |
| Average ± stdev | 39.9 ± 0.8% | 60.1 ± 0.8% | 324 ± 6 | 90 ± 2 | 258 ± 6 | 366 ± 2 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.02 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.86 | 0.86 | -0.94 | 0.27 | 0.96 | 0.20 | - |
| Pearson p-value (two tailed) |
2.95E-02 | 2.95E-02 | 5.94E-03 | 6.04E-01 | 1.95E-03 | 7.08E-01 | - |
| Stats for ND3 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.9 - 43.4% | 56.6 - 58.1% | 103 - 106 | 41 - 46 | 90 - 92 | 106 - 110 | 30.1 - 57.0 |
| Median | 42.5% | 57.5% | 105 | 43 | 90 | 109 | 33.2 |
| Average ± stdev | 42.6 ± 0.5% | 57.4 ± 0.5% | 104 ± 0 | 43 ± 1 | 90 ± 0 | 108 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.04 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.27 | 0.27 | -0.61 | 0.01 | 0.98 | -0.33 | - |
| Pearson p-value (two tailed) |
6.04E-01 | 6.04E-01 | 1.99E-01 | 9.91E-01 | 5.42E-04 | 5.22E-01 | - |
| Stats for ND4 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.2 - 42.3% | 57.7 - 58.8% | 422 - 431 | 144 - 152 | 357 - 363 | 438 - 447 | 30.1 - 57.0 |
| Median | 41.6% | 58.5% | 427 | 146 | 359 | 447 | 33.2 |
| Average ± stdev | 41.6 ± 0.4% | 58.4 ± 0.4% | 426 ± 2 | 147 ± 3 | 359 ± 1 | 444 ± 3 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
0.74 | -0.74 | 0.10 | 0.95 | -0.67 | -0.70 | - |
| Pearson p-value (two tailed) |
9.16E-02 | 9.16E-02 | 8.58E-01 | 3.18E-03 | 1.48E-01 | 1.23E-01 | - |
| Stats for ND4L (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.4 - 41.8% | 58.2 - 59.6% | 83 - 87 | 35 - 39 | 85 - 88 | 86 - 91 | 30.1 - 57.0 |
| Median | 41.4% | 59.6% | 85 | 37 | 88 | 89 | 33.2 |
| Average ± stdev | 41.0 ± 0.7% | 59.0 ± 0.7% | 84 ± 1 | 37 ± 1 | 86 ± 1 | 88 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.04 | 0.01 | 0.02 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.02 | 0.02 | 0.35 | -0.37 | -0.56 | 0.45 | - |
| Pearson p-value (two tailed) |
9.74E-01 | 9.74E-01 | 5.01E-01 | 4.67E-01 | 2.47E-01 | 3.75E-01 | - |
| Stats for ND5 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.8 - 43.5% | 56.5 - 57.2% | 580 - 594 | 190 - 206 | 457 - 475 | 555 - 576 | 30.1 - 57.0 |
| Median | 43.5% | 56.8% | 589 | 196 | 466 | 568 | 33.2 |
| Average ± stdev | 43.2 ± 0.4% | 56.8 ± 0.4% | 588 ± 4 | 196 ± 4 | 465 ± 6 | 566 ± 6 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.89 | 0.89 | -0.70 | -0.28 | 0.75 | 0.15 | - |
| Pearson p-value (two tailed) |
1.80E-02 | 1.80E-02 | 1.20E-01 | 5.94E-01 | 8.35E-02 | 7.77E-01 | - |
| Stats for ND6 (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.4 - 40.5% | 59.5 - 60.6% | 167 - 175 | 39 - 41 | 97 - 103 | 217 - 219 | 30.1 - 57.0 |
| Median | 40.2% | 59.8% | 173 | 39 | 98 | 217 | 33.2 |
| Average ± stdev | 40.1 ± 0.5% | 59.9 ± 0.5% | 171 ± 3 | 39 ± 0 | 99 ± 2 | 217 ± 0 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.02 | 0.03 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.30 | 0.30 | -0.27 | 0.18 | 0.25 | 0.06 | - |
| Pearson p-value (two tailed) |
5.64E-01 | 5.64E-01 | 6.06E-01 | 7.33E-01 | 6.26E-01 | 9.09E-01 | - |
| Stats for 12S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.7 - 42.4% | 57.6 - 58.3% | 233 - 238 | 170 - 176 | 206 - 211 | 353 - 358 | 30.1 - 57.0 |
| Median | 41.9% | 58.2% | 235 | 174 | 210 | 355 | 33.2 |
| Average ± stdev | 42.0 ± 0.3% | 58.0 ± 0.3% | 235 ± 1 | 173 ± 2 | 209 ± 1 | 355 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.01 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.45 | 0.45 | 0.53 | -0.77 | 0.08 | 0.87 | - |
| Pearson p-value (two tailed) |
3.73E-01 | 3.73E-01 | 2.80E-01 | 7.57E-02 | 8.83E-01 | 2.35E-02 | - |
| Stats for 16S rRNA gene (group size: 6 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.0 - 38.6% | 61.4 - 62.0% | 341 - 352 | 257 - 261 | 386 - 399 | 579 - 583 | 30.1 - 57.0 |
| Median | 38.4% | 61.8% | 345 | 259 | 395 | 581 | 33.2 |
| Average ± stdev | 38.3 ± 0.2% | 61.7 ± 0.2% | 346 ± 3 | 258 ± 1 | 393 ± 4 | 581 ± 1 | 38.3 ± 10.1 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.01 | 0.00 | 0.26 |
| Pearson correlation coefficient with log10MLS |
-0.49 | 0.49 | -0.60 | 0.77 | 0.64 | -0.36 | - |
| Pearson p-value (two tailed) |
3.25E-01 | 3.25E-01 | 2.10E-01 | 7.16E-02 | 1.68E-01 | 4.85E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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