Viewing data for Equus kiang


Scientific name Equus kiang
Common name Kiang
Maximum lifespan 30.10 years (Equus kiang@AnAge)

Total mtDNA (size: 16380 bases) GC AT G C A T
Base content (bases) 6829 9551 4687 2142 4221 5330
Base content per 1 kb (bases) 417 583 286 131 258 325
Base content (%) 41.7% 58.3%
Total protein-coding genes (size: 11329 bases) GC AT G C A T
Base content (bases) 4834 6495 3495 1339 2929 3566
Base content per 1 kb (bases) 427 573 309 118 259 315
Base content (%) 42.7% 57.3%
D-loop (size: 909 bases) GC AT G C A T
Base content (bases) 380 529 254 126 251 278
Base content per 1 kb (bases) 418 582 279 139 276 306
Base content (%) 41.8% 58.2%
Total tRNA-coding genes (size: 1513 bases) GC AT G C A T
Base content (bases) 569 944 333 236 420 524
Base content per 1 kb (bases) 376 624 220 156 278 346
Base content (%) 37.6% 62.4%
Total rRNA-coding genes (size: 2551 bases) GC AT G C A T
Base content (bases) 1010 1541 578 432 605 936
Base content per 1 kb (bases) 396 604 227 169 237 367
Base content (%) 39.6% 60.4%
12S rRNA gene (size: 973 bases) GC AT G C A T
Base content (bases) 407 566 233 174 211 355
Base content per 1 kb (bases) 418 582 239 179 217 365
Base content (%) 41.8% 58.2%
16S rRNA gene (size: 1578 bases) GC AT G C A T
Base content (bases) 603 975 345 258 394 581
Base content per 1 kb (bases) 382 618 219 163 250 368
Base content (%) 38.2% 61.8%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 280 401 206 74 185 216
Base content per 1 kb (bases) 411 589 302 109 272 317
Base content (%) 41.1% 58.9%
ATP8 (size: 204 bases) GC AT G C A T
Base content (bases) 69 135 53 16 55 80
Base content per 1 kb (bases) 338 662 260 78 270 392
Base content (%) 33.8% 66.2%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 670 875 423 247 439 436
Base content per 1 kb (bases) 434 566 274 160 284 282
Base content (%) 43.4% 56.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 286 398 196 90 172 226
Base content per 1 kb (bases) 418 582 287 132 251 330
Base content (%) 41.8% 58.2%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 369 415 249 120 202 213
Base content per 1 kb (bases) 471 529 318 153 258 272
Base content (%) 47.1% 52.9%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 517 623 373 144 298 325
Base content per 1 kb (bases) 454 546 327 126 261 285
Base content (%) 45.4% 54.6%
ND1 (size: 956 bases) GC AT G C A T
Base content (bases) 407 549 299 108 252 297
Base content per 1 kb (bases) 426 574 313 113 264 311
Base content (%) 42.6% 57.4%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 419 620 330 89 252 368
Base content per 1 kb (bases) 403 597 318 86 243 354
Base content (%) 40.3% 59.7%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 147 199 105 42 90 109
Base content per 1 kb (bases) 425 575 303 121 260 315
Base content (%) 42.5% 57.5%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 571 807 427 144 360 447
Base content per 1 kb (bases) 414 586 310 104 261 324
Base content (%) 41.4% 58.6%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 120 177 83 37 88 89
Base content per 1 kb (bases) 404 596 279 125 296 300
Base content (%) 40.4% 59.6%
ND5 (size: 1815 bases) GC AT G C A T
Base content (bases) 790 1025 594 196 457 568
Base content per 1 kb (bases) 435 565 327 108 252 313
Base content (%) 43.5% 56.5%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 214 314 175 39 97 217
Base content per 1 kb (bases) 405 595 331 74 184 411
Base content (%) 40.5% 59.5%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 14 (6.19%)
Threonine (Thr, T)
n = 21 (9.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.54%)
Leucine (Leu, L)
n = 40 (17.7%)
Isoleucine (Ile, I)
n = 29 (12.83%)
Methionine (Met, M)
n = 14 (6.19%)
Proline (Pro, P)
n = 12 (5.31%)
Phenylalanine (Phe, F)
n = 14 (6.19%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 12 (5.31%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 13 11 6 6 24 2 2 8 1 0 0 8 0 4 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 5 9 4 0 0 5 5 1 3 7 2 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 11 1 1 1 7 1 1 3 0 2 1 0 2 10 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 0 1 0 4 0 2 0 1 1 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
41 70 84 32
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 61 39 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 75 93 48
ATP8 (size: 204 bases)
Amino acid sequence: MPQLDTSTWFINIVSMFLTLFIVFQLKISKHSYLTHPEAKTTKMTKHLTPWESKWTKIYSPLSLPQQ*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.49%)
Serine (Ser, S)
n = 7 (10.45%)
Threonine (Thr, T)
n = 9 (13.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (2.99%)
Leucine (Leu, L)
n = 8 (11.94%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 5 (7.46%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 1 (1.49%)
Glutamine (Gln, Q)
n = 4 (5.97%)
Histidine (His, H)
n = 3 (4.48%)
Lysine (Lys, K)
n = 7 (10.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 2 1 1 5 0 0 3 1 0 1 1 0 2 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 1 0 0 0 0 0 2 1 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 4 1 1 0 4 2 0 0 2 0 0 1 1 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 1 0 6 1 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
6 19 25 18
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 22 21 22
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 12 34 15
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 41 (7.98%)
Serine (Ser, S)
n = 31 (6.03%)
Threonine (Thr, T)
n = 38 (7.39%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 35 (6.81%)
Leucine (Leu, L)
n = 61 (11.87%)
Isoleucine (Ile, I)
n = 39 (7.59%)
Methionine (Met, M)
n = 31 (6.03%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 14 (2.72%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 18 (3.5%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 23 24 11 11 27 3 9 6 1 5 11 18 1 12 30
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 0 1 12 11 14 4 9 10 24 4 7 9 12 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 14 3 10 4 14 0 0 3 9 10 0 0 6 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 10 0 7 7 8 1 2 2 4 0 0 0 1 0 17
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
147 113 138 117
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 135 96 208
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 175 202 114
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 18 (7.93%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.85%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 20 (8.81%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 12 13 5 4 17 2 5 5 1 3 3 4 1 2 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 1 6 2 0 1 3 3 1 3 3 7 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 9 1 4 5 8 0 0 4 3 7 0 0 1 4 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 12 3 2 9 5 0 1 1 3 1 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 61 66 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 57 61 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 78 99 40
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 24 (9.23%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 34 (13.08%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 13 5 6 6 15 2 5 6 1 1 6 5 3 6 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 4 8 3 0 0 8 10 3 0 7 3 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 10 0 4 3 11 1 0 5 2 9 0 0 0 7 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 8 0 2 1 3 0 0 2 3 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
62 67 59 73
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
45 65 55 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 117 99 32
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 20 (5.28%)
Serine (Ser, S)
n = 27 (7.12%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 16 (4.22%)
Leucine (Leu, L)
n = 62 (16.36%)
Isoleucine (Ile, I)
n = 45 (11.87%)
Methionine (Met, M)
n = 11 (2.9%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 26 (6.86%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 15 (3.96%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 34 10 5 20 27 3 6 5 1 0 6 8 2 9 17
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 4 4 9 7 0 5 8 11 0 3 8 10 2 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 16 0 4 9 10 0 1 3 1 14 0 1 3 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 4 2 1 10 7 2 0 3 5 0 1 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
77 105 111 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 92 75 160
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 176 139 51
ND1 (size: 956 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 27 (8.52%)
Serine (Ser, S)
n = 24 (7.57%)
Threonine (Thr, T)
n = 20 (6.31%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 12 (3.79%)
Leucine (Leu, L)
n = 60 (18.93%)
Isoleucine (Ile, I)
n = 30 (9.46%)
Methionine (Met, M)
n = 17 (5.36%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 20 (6.31%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 7 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 16 16 5 14 31 5 5 6 1 1 6 5 0 6 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 3 14 10 0 1 4 6 1 2 5 14 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 11 0 0 6 15 0 0 3 5 8 0 0 2 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 1 2 7 0 0 1 6 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 94 89 70
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 90 56 139
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 115 151 42
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 36 (10.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 60 (17.39%)
Isoleucine (Ile, I)
n = 39 (11.3%)
Methionine (Met, M)
n = 37 (10.72%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 10 (2.9%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 27 37 3 18 32 5 2 9 1 3 1 2 2 2 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 0 0 11 7 1 2 5 7 0 2 11 6 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 19 0 1 10 14 1 1 3 2 7 0 0 3 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 0 0 1 12 1 0 0 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
47 96 144 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 100 59 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 134 165 36
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 36 (10.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 60 (17.39%)
Isoleucine (Ile, I)
n = 39 (11.3%)
Methionine (Met, M)
n = 37 (10.72%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 10 (2.9%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 27 37 3 18 32 5 2 9 1 3 1 2 2 2 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 0 0 11 7 1 2 5 7 0 2 11 6 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 19 0 1 10 14 1 1 3 2 7 0 0 3 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 0 0 1 12 1 0 0 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
47 96 144 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 100 59 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 134 165 36
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 32 (6.99%)
Serine (Ser, S)
n = 38 (8.3%)
Threonine (Thr, T)
n = 39 (8.52%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 12 (2.62%)
Leucine (Leu, L)
n = 92 (20.09%)
Isoleucine (Ile, I)
n = 42 (9.17%)
Methionine (Met, M)
n = 32 (6.99%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 19 (4.15%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 25 (5.46%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 30 28 14 16 50 2 9 10 2 2 3 6 1 6 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 2 3 19 10 0 3 5 6 3 2 13 8 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 19 3 7 6 14 0 1 10 2 13 1 1 9 16 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 8 0 1 2 12 1 0 4 6 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 138 162 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
54 121 87 197
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 168 198 75
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 10 (10.2%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 11 (11.22%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 10 1 4 13 1 3 2 0 2 4 3 1 1 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 1 2 4 0 0 1 2 1 0 1 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 2 0 1 4 3 0 0 1 2 0 0 0 2 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
24 27 26 22
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 21 17 52
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 35 46 14
ND5 (size: 1815 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.64%)
Alanine (Ala, A)
n = 36 (5.96%)
Serine (Ser, S)
n = 55 (9.11%)
Threonine (Thr, T)
n = 57 (9.44%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 18 (2.98%)
Leucine (Leu, L)
n = 96 (15.89%)
Isoleucine (Ile, I)
n = 58 (9.6%)
Methionine (Met, M)
n = 35 (5.79%)
Proline (Pro, P)
n = 26 (4.3%)
Phenylalanine (Phe, F)
n = 44 (7.28%)
Tyrosine (Tyr, Y)
n = 17 (2.81%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 12 (1.99%)
Glutamic acid (Glu, E)
n = 13 (2.15%)
Asparagine (Asn, N)
n = 29 (4.8%)
Glutamine (Gln, Q)
n = 18 (2.98%)
Histidine (His, H)
n = 16 (2.65%)
Lysine (Lys, K)
n = 21 (3.48%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 44 32 9 31 44 4 6 16 2 3 6 7 2 11 33
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 3 2 20 13 1 4 11 9 4 5 9 12 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
33 20 0 5 16 18 2 1 13 6 11 0 2 7 22 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 11 2 2 10 21 0 0 4 5 0 0 0 1 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
107 157 214 127
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
67 160 127 251
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 277 227 79
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.86%)
Alanine (Ala, A)
n = 6 (3.43%)
Serine (Ser, S)
n = 13 (7.43%)
Threonine (Thr, T)
n = 9 (5.14%)
Cysteine (Cys, C)
n = 1 (0.57%)
Valine (Val, V)
n = 30 (17.14%)
Leucine (Leu, L)
n = 20 (11.43%)
Isoleucine (Ile, I)
n = 13 (7.43%)
Methionine (Met, M)
n = 10 (5.71%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 12 (6.86%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 3 (1.71%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.14%)
Arginine (Arg, R)
n = 1 (0.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 0 0 2 0 0 3 4 0 1 13 0 8 9 12 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
10 1 0 5 0 1 0 7 0 6 13 3 0 0 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 2 2 4 0 1 2 4 2 7 2 3 11 3 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 8 3 0 1 1 1 0 0 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 10 43 49
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
38 25 28 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
63 4 26 83
Total protein-coding genes (size: 11397 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 215 (5.66%)
Alanine (Ala, A)
n = 241 (6.35%)
Serine (Ser, S)
n = 300 (7.9%)
Threonine (Thr, T)
n = 309 (8.14%)
Cysteine (Cys, C)
n = 23 (0.61%)
Valine (Val, V)
n = 179 (4.72%)
Leucine (Leu, L)
n = 616 (16.23%)
Isoleucine (Ile, I)
n = 347 (9.14%)
Methionine (Met, M)
n = 229 (6.03%)
Proline (Pro, P)
n = 191 (5.03%)
Phenylalanine (Phe, F)
n = 236 (6.22%)
Tyrosine (Tyr, Y)
n = 127 (3.35%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 66 (1.74%)
Glutamic acid (Glu, E)
n = 98 (2.58%)
Asparagine (Asn, N)
n = 152 (4.0%)
Glutamine (Gln, Q)
n = 92 (2.42%)
Histidine (His, H)
n = 105 (2.77%)
Lysine (Lys, K)
n = 96 (2.53%)
Arginine (Arg, R)
n = 63 (1.66%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
124 223 194 71 138 296 35 60 78 14 33 47 76 23 75 161
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
35 3 20 41 113 81 6 32 60 91 32 33 75 80 3 44
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
113 141 11 43 65 122 9 9 52 42 85 5 16 39 113 26
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
79 80 18 22 44 89 7 6 18 37 2 1 0 7 0 99
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
799 991 1195 812
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
467 980 743 1607
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
216 1406 1532 643 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​E​q​u​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ k​i​a​n​g​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.