Stats for family Thryonomyidae
| Stats for total mtDNA (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
36.2 |
63.8 |
4029 |
1993 |
4846 |
5758 |
5.4 |
| Stats for total protein-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
36.4 |
63.6 |
2908 |
1218 |
3401 |
3806 |
5.4 |
| Stats for D-loop (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
36.4 |
63.6 |
213 |
131 |
302 |
300 |
5.4 |
| Stats for total tRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
33.6 |
66.4 |
308 |
200 |
434 |
571 |
5.4 |
| Stats for total rRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
37.2 |
62.8 |
514 |
427 |
631 |
959 |
5.4 |
| Stats for ATP6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
34.2 |
65.8 |
175 |
58 |
213 |
235 |
5.4 |
| Stats for ATP8 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
30.3 |
69.7 |
50 |
9 |
55 |
81 |
5.4 |
| Stats for COX1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
39.2 |
60.8 |
366 |
240 |
469 |
470 |
5.4 |
| Stats for COX2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
37.4 |
62.6 |
174 |
81 |
181 |
245 |
5.4 |
| Stats for COX3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
38.6 |
61.4 |
194 |
109 |
236 |
245 |
5.4 |
| Stats for CYTB (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
40.1 |
59.9 |
318 |
138 |
337 |
345 |
5.4 |
| Stats for ND1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
37.2 |
62.8 |
262 |
95 |
289 |
314 |
5.4 |
| Stats for ND2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
33.2 |
66.8 |
259 |
87 |
311 |
385 |
5.4 |
| Stats for ND3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
35.8 |
64.2 |
89 |
35 |
109 |
113 |
5.4 |
| Stats for ND4 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
36.4 |
63.6 |
370 |
131 |
425 |
452 |
5.4 |
| Stats for ND4L (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
34.3 |
65.7 |
72 |
30 |
103 |
92 |
5.4 |
| Stats for ND5 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
34.3 |
65.7 |
455 |
167 |
563 |
627 |
5.4 |
| Stats for ND6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
33.7 |
66.3 |
132 |
41 |
123 |
217 |
5.4 |
| Stats for 12S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
39.2 |
60.8 |
211 |
170 |
238 |
352 |
5.4 |
| Stats for 16S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Thryonomys swinderianus |
35.9 |
64.1 |
303 |
257 |
393 |
607 |
5.4 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
