Stats for family Hippopotamidae

Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.1 57.9 4635 2263 4101 5396 42.3
Hippopotamus amphibius 42.6 57.4 4694 2289 4052 5372 61.2
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.7 57.3 3451 1395 2858 3645 42.3
Hippopotamus amphibius 43.4 56.6 3482 1430 2811 3601 61.2
Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.9 60.1 351 252 398 510 42.3
Hippopotamus amphibius 40.5 59.5 361 250 384 513 61.2
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 40.1 59.9 580 435 562 955 42.3
Hippopotamus amphibius 40.2 59.8 585 434 556 958 61.2
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.9 57.1 213 79 169 220 42.3
Hippopotamus amphibius 44.2 55.8 221 80 161 219 61.2
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 38.6 61.4 67 13 50 77 42.3
Hippopotamus amphibius 40.1 59.9 68 15 51 73 61.2
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.7 56.2 422 259 435 440 42.3
Hippopotamus amphibius 45.2 54.8 429 270 430 417 61.2
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 41.7 58.3 188 97 170 229 42.3
Hippopotamus amphibius 41.4 58.6 185 98 171 230 61.2
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 45.8 54.2 235 124 213 212 42.3
Hippopotamus amphibius 45.8 54.2 235 124 214 211 61.2
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 45.4 54.6 363 154 279 344 42.3
Hippopotamus amphibius 46.1 53.9 367 158 276 339 61.2
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.5 56.5 306 110 234 306 42.3
Hippopotamus amphibius 43.6 56.4 303 114 234 306 61.2
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.2 60.8 318 90 258 376 42.3
Hippopotamus amphibius 40.5 59.5 324 99 254 367 61.2
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.4 56.6 107 43 89 107 42.3
Hippopotamus amphibius 42.9 57.1 109 40 88 110 61.2
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.6 57.4 433 154 350 441 42.3
Hippopotamus amphibius 43.3 56.7 449 147 336 446 61.2
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 36.0 64.0 70 37 93 97 42.3
Hippopotamus amphibius 38.4 61.6 74 40 91 92 61.2
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.1 57.9 568 199 453 601 42.3
Hippopotamus amphibius 42.6 57.4 551 209 439 586 61.2
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.0 58.0 180 42 86 220 42.3
Hippopotamus amphibius 42.0 58.0 181 41 83 223 61.2
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 41.5 58.5 235 166 200 366 42.3
Hippopotamus amphibius 41.7 58.3 237 167 198 366 61.2
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.2 60.8 345 269 362 589 42.3
Hippopotamus amphibius 39.3 60.7 348 267 358 592 61.2

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.