Stats for family Hippopotamidae

Species in family:
Hexaprotodon liberiensis
Hippopotamus amphibius
 Export table data
Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.1 57.9 4635 2263 4101 5396 42.3
Hippopotamus amphibius 42.6 57.4 4694 2289 4052 5372 61.2
 Export table data
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.7 57.3 3451 1395 2858 3645 42.3
Hippopotamus amphibius 43.4 56.6 3482 1430 2811 3601 61.2
 Export table data
Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
 Export table data
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.9 60.1 351 252 398 510 42.3
Hippopotamus amphibius 40.5 59.5 361 250 384 513 61.2
 Export table data
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 40.1 59.9 580 435 562 955 42.3
Hippopotamus amphibius 40.2 59.8 585 434 556 958 61.2
 Export table data
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.9 57.1 213 79 169 220 42.3
Hippopotamus amphibius 44.2 55.8 221 80 161 219 61.2
 Export table data
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 38.6 61.4 67 13 50 77 42.3
Hippopotamus amphibius 40.1 59.9 68 15 51 73 61.2
 Export table data
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.7 56.2 422 259 435 440 42.3
Hippopotamus amphibius 45.2 54.8 429 270 430 417 61.2
 Export table data
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 41.7 58.3 188 97 170 229 42.3
Hippopotamus amphibius 41.4 58.6 185 98 171 230 61.2
 Export table data
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 45.8 54.2 235 124 213 212 42.3
Hippopotamus amphibius 45.8 54.2 235 124 214 211 61.2
 Export table data
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 45.4 54.6 363 154 279 344 42.3
Hippopotamus amphibius 46.1 53.9 367 158 276 339 61.2
 Export table data
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.5 56.5 306 110 234 306 42.3
Hippopotamus amphibius 43.6 56.4 303 114 234 306 61.2
 Export table data
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.2 60.8 318 90 258 376 42.3
Hippopotamus amphibius 40.5 59.5 324 99 254 367 61.2
 Export table data
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 43.4 56.6 107 43 89 107 42.3
Hippopotamus amphibius 42.9 57.1 109 40 88 110 61.2
 Export table data
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.6 57.4 433 154 350 441 42.3
Hippopotamus amphibius 43.3 56.7 449 147 336 446 61.2
 Export table data
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 36.0 64.0 70 37 93 97 42.3
Hippopotamus amphibius 38.4 61.6 74 40 91 92 61.2
 Export table data
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.1 57.9 568 199 453 601 42.3
Hippopotamus amphibius 42.6 57.4 551 209 439 586 61.2
 Export table data
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 42.0 58.0 180 42 86 220 42.3
Hippopotamus amphibius 42.0 58.0 181 41 83 223 61.2
 Export table data
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 41.5 58.5 235 166 200 366 42.3
Hippopotamus amphibius 41.7 58.3 237 167 198 366 61.2
 Export table data
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Hexaprotodon liberiensis 39.2 60.8 345 269 362 589 42.3
Hippopotamus amphibius 39.3 60.7 348 267 358 592 61.2
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.