Stats of COX1 for family Salmonidae

Species in family:
Coregonus clupeaformis
Coregonus nasus
Hucho hucho
Hucho taimen
Oncorhynchus clarkii
Oncorhynchus gorbuscha
Oncorhynchus keta
Oncorhynchus kisutch
Oncorhynchus mykiss
Oncorhynchus nerka
Oncorhynchus tshawytscha
Prosopium cylindraceum
Prosopium williamsoni
Salmo salar
Salmo trutta
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Stats for COX1 (group size: 19 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.3 - 47.8% 52.2 - 55.7% 405 - 439 275 - 307 447 - 487 350 - 399 3.0 - 50.0
Median 45.6% 54.4% 418 286 463 382 15.0
Average ± stdev 45.7 ± 0.9% 54.3 ± 0.9% 419 ± 8 288 ± 9 462 ± 9 380 ± 13 17.7 ± 12.2
Coefficient of variation 0.02 0.02 0.02 0.03 0.02 0.04 0.69
Pearson correlation
coefficient with log10MLS		 0.27 -0.27 0.18 0.22 0.46 -0.60 -
Pearson p-value
(two tailed)		 2.68E-01 2.68E-01 4.64E-01 3.65E-01 4.52E-02 7.12E-03 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.