Stats of ATP8 for family Salmonidae

Species in family:
Coregonus clupeaformis
Coregonus nasus
Hucho hucho
Hucho taimen
Oncorhynchus clarkii
Oncorhynchus gorbuscha
Oncorhynchus keta
Oncorhynchus kisutch
Oncorhynchus mykiss
Oncorhynchus nerka
Oncorhynchus tshawytscha
Prosopium cylindraceum
Prosopium williamsoni
Salmo salar
Salmo trutta
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Stats for ATP8 (group size: 19 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.5 - 48.8% 51.2 - 56.5% 53 - 59 20 - 24 39 - 44 46 - 51 3.0 - 50.0
Median 45.2% 54.8% 55 22 42 50 15.0
Average ± stdev 45.9 ± 1.7% 54.1 ± 1.7% 55 ± 1 22 ± 1 41 ± 1 48 ± 1 17.7 ± 12.2
Coefficient of variation 0.04 0.03 0.03 0.06 0.03 0.03 0.69
Pearson correlation
coefficient with log10MLS		 0.21 -0.21 0.19 0.20 -0.08 -0.31 -
Pearson p-value
(two tailed)		 3.79E-01 3.79E-01 4.35E-01 4.09E-01 7.39E-01 2.01E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.