Stats of ATP6 for family Salmonidae

Species in family:
Coregonus clupeaformis
Coregonus nasus
Hucho hucho
Hucho taimen
Oncorhynchus clarkii
Oncorhynchus gorbuscha
Oncorhynchus keta
Oncorhynchus kisutch
Oncorhynchus mykiss
Oncorhynchus nerka
Oncorhynchus tshawytscha
Prosopium cylindraceum
Prosopium williamsoni
Salmo salar
Salmo trutta
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Stats for ATP6 (group size: 19 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.4 - 47.8% 52.2 - 57.6% 200 - 233 80 - 100 186 - 208 166 - 186 3.0 - 50.0
Median 45.5% 54.5% 219 92 202 172 15.0
Average ± stdev 45.5 ± 1.5% 54.5 ± 1.5% 219 ± 7 91 ± 5 198 ± 7 173 ± 5 17.7 ± 12.2
Coefficient of variation 0.03 0.03 0.03 0.06 0.04 0.03 0.69
Pearson correlation
coefficient with log10MLS		 0.27 -0.27 0.19 0.23 -0.18 -0.21 -
Pearson p-value
(two tailed)		 2.58E-01 2.58E-01 4.31E-01 3.46E-01 4.58E-01 3.80E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.