Stats for family Acipenseridae

Species in family:
Acipenser dabryanus
Acipenser gueldenstaedtii
Acipenser ruthenus
Acipenser schrenckii
Acipenser stellatus
Acipenser sturio
Acipenser transmontanus
Huso dauricus
Huso huso
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Stats for total mtDNA (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.2 - 46.1% 53.9 - 54.8% 4819 - 4938 2696 - 2743 3900 - 4114 4945 - 5080 27.0 - 118.0
Median 45.8% 54.2% 4877 2727 4025 5018 60.0
Average ± stdev 45.7 ± 0.3% 54.3 ± 0.3% 4881 ± 31 2720 ± 17 4017 ± 53 5018 ± 44 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.01 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.15 -0.10 0.28 -0.03 -0.16 0.12 -
Pearson p-value
(two tailed)		 7.05E-01 7.88E-01 4.73E-01 9.38E-01 6.90E-01 7.55E-01 -
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Stats for total protein-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.0 - 46.9% 53.1 - 54.0% 3541 - 3632 1701 - 1749 2774 - 2865 3267 - 3319 27.0 - 118.0
Median 46.6% 53.4% 3596 1716 2805 3291 60.0
Average ± stdev 46.5 ± 0.3% 53.5 ± 0.3% 3589 ± 29 1719 ± 13 2812 ± 29 3293 ± 14 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.01 0.01 0.00 0.42
Pearson correlation
coefficient with log10MLS		 0.10 -0.08 0.20 -0.16 -0.09 0.04 -
Pearson p-value
(two tailed)		 8.05E-01 8.37E-01 6.03E-01 6.79E-01 8.21E-01 9.19E-01 -
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Stats for D-loop (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 34.9 - 38.2% 61.8 - 65.1% 162 - 239 113 - 156 208 - 334 241 - 358 27.0 - 118.0
Median 36.7% 63.3% 201 128 296 301 60.0
Average ± stdev 36.4 ± 1.1% 63.6 ± 1.1% 202 ± 24 130 ± 14 283 ± 35 301 ± 34 72.9 ± 30.7
Coefficient of variation 0.03 0.02 0.12 0.11 0.13 0.11 0.42
Pearson correlation
coefficient with log10MLS		 0.35 -0.33 0.11 -0.00 -0.11 0.00 -
Pearson p-value
(two tailed)		 3.51E-01 3.86E-01 7.75E-01 9.92E-01 7.74E-01 9.98E-01 -
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Stats for total tRNA-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.6 - 44.4% 55.6 - 56.4% 371 - 382 303 - 311 388 - 394 478 - 485 27.0 - 118.0
Median 44.0% 56.0% 375 307 390 481 60.0
Average ± stdev 43.9 ± 0.2% 56.1 ± 0.2% 376 ± 3 307 ± 2 390 ± 1 481 ± 2 72.9 ± 30.7
Coefficient of variation 0.00 0.00 0.01 0.01 0.00 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.13 -0.13 0.42 0.05 0.03 0.40 -
Pearson p-value
(two tailed)		 7.35E-01 7.35E-01 2.59E-01 8.89E-01 9.39E-01 2.81E-01 -
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Stats for total rRNA-coding genes (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.8 - 46.3% 53.5 - 54.2% 677 - 699 541 - 558 510 - 530 903 - 926 27.0 - 118.0
Median 46.1% 53.9% 684 543 515 923 60.0
Average ± stdev 46.1 ± 0.2% 53.9 ± 0.2% 684 ± 6 544 ± 4 517 ± 5 920 ± 6 72.9 ± 30.7
Coefficient of variation 0.00 0.00 0.01 0.01 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.11 0.10 0.11 0.52 -0.16 0.71 -
Pearson p-value
(two tailed)		 7.74E-01 8.04E-01 7.80E-01 1.49E-01 6.90E-01 3.12E-02 -
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Stats for ATP6 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.2 - 49.1% 50.9 - 53.8% 224 - 238 90 - 100 171 - 185 177 - 185 27.0 - 118.0
Median 47.5% 52.5% 233 92 175 183 60.0
Average ± stdev 47.6 ± 0.9% 52.4 ± 0.9% 232 ± 4 93 ± 2 176 ± 4 182 ± 2 72.9 ± 30.7
Coefficient of variation 0.02 0.02 0.02 0.03 0.03 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.36 -0.36 0.27 0.30 -0.27 -0.39 -
Pearson p-value
(two tailed)		 3.39E-01 3.39E-01 4.74E-01 4.38E-01 4.86E-01 3.05E-01 -
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Stats for ATP8 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.9 - 42.9% 57.1 - 60.1% 48 - 51 16 - 21 42 - 44 54 - 59 27.0 - 118.0
Median 41.1% 58.9% 50 19 43 55 60.0
Average ± stdev 41.2 ± 0.9% 58.8 ± 0.9% 49 ± 0 19 ± 1 43 ± 0 55 ± 1 72.9 ± 30.7
Coefficient of variation 0.02 0.02 0.02 0.08 0.02 0.03 0.42
Pearson correlation
coefficient with log10MLS		 -0.56 0.56 -0.27 -0.39 0.08 0.54 -
Pearson p-value
(two tailed)		 1.17E-01 1.17E-01 4.87E-01 3.03E-01 8.41E-01 1.36E-01 -
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Stats for COX1 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 47.0 - 48.3% 51.7 - 53.0% 432 - 450 296 - 301 418 - 440 379 - 387 27.0 - 118.0
Median 47.7% 52.3% 440 300 431 384 60.0
Average ± stdev 47.7 ± 0.5% 52.3 ± 0.5% 441 ± 6 299 ± 1 429 ± 7 383 ± 2 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.00 0.02 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.14 -0.14 0.28 -0.53 -0.32 0.68 -
Pearson p-value
(two tailed)		 7.15E-01 7.15E-01 4.67E-01 1.39E-01 4.02E-01 4.20E-02 -
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Stats for COX2 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.7 - 45.9% 54.1 - 56.3% 185 - 194 114 - 126 168 - 174 205 - 218 27.0 - 118.0
Median 44.6% 55.4% 189 119 171 212 60.0
Average ± stdev 44.6 ± 0.6% 55.4 ± 0.6% 189 ± 2 119 ± 3 170 ± 1 212 ± 3 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.03 0.01 0.02 0.42
Pearson correlation
coefficient with log10MLS		 -0.01 0.01 0.07 0.07 0.08 0.13 -
Pearson p-value
(two tailed)		 9.78E-01 9.78E-01 8.54E-01 8.52E-01 8.33E-01 7.48E-01 -
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Stats for COX3 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 47.3 - 48.6% 51.4 - 52.7% 240 - 246 130 - 138 195 - 202 205 - 214 27.0 - 118.0
Median 47.9% 52.1% 243 134 197 211 60.0
Average ± stdev 48.0 ± 0.4% 52.0 ± 0.4% 243 ± 1 133 ± 2 198 ± 2 210 ± 3 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 -0.60 0.60 -0.13 -0.62 0.08 0.53 -
Pearson p-value
(two tailed)		 8.71E-02 8.71E-02 7.42E-01 7.70E-02 8.39E-01 1.40E-01 -
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Stats for CYTB (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.8 - 47.1% 52.9 - 54.2% 351 - 363 166 - 177 297 - 309 307 - 316 27.0 - 118.0
Median 46.5% 53.5% 358 172 300 309 60.0
Average ± stdev 46.4 ± 0.4% 53.6 ± 0.4% 357 ± 4 171 ± 3 301 ± 4 310 ± 3 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 -0.53 0.53 -0.30 -0.34 0.16 0.53 -
Pearson p-value
(two tailed)		 1.44E-01 1.44E-01 4.28E-01 3.69E-01 6.74E-01 1.41E-01 -
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Stats for ND1 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.8 - 47.2% 52.8 - 54.2% 308 - 321 137 - 145 244 - 252 269 - 279 27.0 - 118.0
Median 46.2% 53.8% 310 140 248 276 60.0
Average ± stdev 46.3 ± 0.4% 53.6 ± 0.4% 311 ± 3 140 ± 2 248 ± 3 274 ± 3 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 0.44 -0.43 0.45 0.03 -0.01 -0.51 -
Pearson p-value
(two tailed)		 2.37E-01 2.50E-01 2.19E-01 9.41E-01 9.70E-01 1.60E-01 -
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Stats for ND2 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.9 - 46.6% 53.4 - 56.1% 335 - 351 124 - 138 225 - 241 330 - 345 27.0 - 118.0
Median 45.6% 54.4% 345 133 231 338 60.0
Average ± stdev 45.5 ± 0.9% 54.5 ± 0.9% 344 ± 5 131 ± 4 232 ± 4 337 ± 5 72.9 ± 30.7
Coefficient of variation 0.02 0.02 0.02 0.04 0.02 0.02 0.42
Pearson correlation
coefficient with log10MLS		 0.23 -0.23 0.49 -0.10 -0.39 0.01 -
Pearson p-value
(two tailed)		 5.58E-01 5.58E-01 1.82E-01 7.93E-01 2.97E-01 9.83E-01 -
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Stats for ND3 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.7 - 49.3% 50.7 - 53.3% 106 - 111 55 - 63 96 - 101 80 - 87 27.0 - 118.0
Median 48.1% 51.9% 108 59 98 84 60.0
Average ± stdev 47.9 ± 0.8% 52.1 ± 0.8% 108 ± 1 59 ± 2 98 ± 1 83 ± 2 72.9 ± 30.7
Coefficient of variation 0.02 0.02 0.02 0.05 0.02 0.03 0.42
Pearson correlation
coefficient with log10MLS		 0.52 -0.52 0.36 0.35 -0.28 -0.32 -
Pearson p-value
(two tailed)		 1.49E-01 1.49E-01 3.46E-01 3.52E-01 4.64E-01 4.00E-01 -
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Stats for ND4 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.5 - 47.3% 52.7 - 54.5% 423 - 439 200 - 216 335 - 350 391 - 411 27.0 - 118.0
Median 46.6% 53.4% 433 210 339 399 60.0
Average ± stdev 46.4 ± 0.6% 53.6 ± 0.6% 432 ± 4 209 ± 4 340 ± 4 399 ± 6 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.02 0.01 0.02 0.42
Pearson correlation
coefficient with log10MLS		 0.12 -0.12 0.11 0.09 0.01 -0.16 -
Pearson p-value
(two tailed)		 7.50E-01 7.50E-01 7.86E-01 8.12E-01 9.88E-01 6.89E-01 -
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Stats for ND4L (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 49.2 - 52.2% 47.8 - 50.8% 104 - 108 41 - 47 72 - 77 70 - 75 27.0 - 118.0
Median 50.2% 49.8% 105 43 75 73 60.0
Average ± stdev 50.3 ± 1.0% 49.7 ± 1.0% 105 ± 1 43 ± 1 74 ± 1 72 ± 1 72.9 ± 30.7
Coefficient of variation 0.02 0.02 0.01 0.04 0.02 0.02 0.42
Pearson correlation
coefficient with log10MLS		 -0.43 0.43 -0.34 -0.40 0.31 0.47 -
Pearson p-value
(two tailed)		 2.43E-01 2.43E-01 3.68E-01 2.81E-01 4.15E-01 2.05E-01 -
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Stats for ND5 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.5 - 45.5% 54.4 - 55.5% 585 - 600 234 - 244 436 - 455 553 - 571 27.0 - 118.0
Median 45.3% 54.7% 591 238 444 566 60.0
Average ± stdev 45.1 ± 0.3% 54.9 ± 0.4% 592 ± 4 237 ± 3 444 ± 5 565 ± 5 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.01 0.01 0.01 0.42
Pearson correlation
coefficient with log10MLS		 -0.00 0.07 0.03 0.11 0.30 -0.14 -
Pearson p-value
(two tailed)		 1.00E+00 8.63E-01 9.31E-01 7.85E-01 4.37E-01 7.15E-01 -
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Stats for ND6 (group size: 9 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.6 - 47.9% 52.1 - 53.4% 181 - 187 56 - 65 58 - 64 213 - 221 27.0 - 118.0
Median 47.3% 52.7% 185 63 59 214 60.0
Average ± stdev 47.3 ± 0.5% 52.7 ± 0.5% 184 ± 1 62 ± 2 60 ± 1 215 ± 2 72.9 ± 30.7
Coefficient of variation 0.01 0.01 0.01 0.04 0.03 0.01 0.42
Pearson correlation
coefficient with log10MLS		 -0.01 0.01 -0.40 0.13 0.22 -0.29 -
Pearson p-value
(two tailed)		 9.73E-01 9.73E-01 2.88E-01 7.47E-01 5.67E-01 4.50E-01 -
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Stats for 12S rRNA gene (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 48.9 - 49.4% 50.6 - 51.1% 263 - 279 207 - 220 177 - 196 306 - 318 27.0 - 118.0
Median 49.3% 50.7% 266 208 180 308 100.0
Average ± stdev 49.3 ± 0.2% 50.7 ± 0.2% 267 ± 4 209 ± 4 181 ± 5 308 ± 3 76.3 ± 31.0
Coefficient of variation 0.00 0.00 0.02 0.02 0.03 0.01 0.41
Pearson correlation
coefficient with log10MLS		 0.10 -0.10 0.54 0.27 0.27 0.53 -
Pearson p-value
(two tailed)		 8.11E-01 8.11E-01 1.66E-01 5.16E-01 5.16E-01 1.81E-01 -
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Stats for 16S rRNA gene (group size: 8 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.0 - 44.6% 55.1 - 56.0% 413 - 427 332 - 338 332 - 341 597 - 616 27.0 - 118.0
Median 44.3% 55.7% 419 336 335 615 100.0
Average ± stdev 44.3 ± 0.2% 55.7 ± 0.3% 418 ± 4 335 ± 1 335 ± 2 611 ± 5 76.3 ± 31.0
Coefficient of variation 0.00 0.00 0.01 0.01 0.01 0.01 0.41
Pearson correlation
coefficient with log10MLS		 -0.20 0.43 -0.64 0.77 -0.81 0.56 -
Pearson p-value
(two tailed)		 6.32E-01 2.93E-01 8.69E-02 2.49E-02 1.52E-02 1.45E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.