Export data of 12S rRNA gene for family Salmonidae

Species (N=19) GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Coregonus clupeaformis 50.2 49.8 256 219 195 277 50.0
Coregonus nasus 50.6 49.4 259 220 192 276 15.0
Hucho hucho 50.3 49.7 259 217 190 281 15.0
Hucho taimen 50.3 49.7 259 217 190 281 16.0
Oncorhynchus clarkii 50.1 49.9 259 215 186 287 10.0
Oncorhynchus gorbuscha 49.7 50.3 256 215 191 285 3.0
Oncorhynchus keta 50.3 49.7 259 217 190 280 7.0
Oncorhynchus kisutch 50.5 49.5 259 219 188 281 5.0
Oncorhynchus mykiss 50.2 49.8 259 215 185 285 11.0
Oncorhynchus nerka 50.4 49.6 257 220 190 280 8.0
Oncorhynchus tshawytscha 49.8 50.2 257 215 192 283 9.0
Prosopium cylindraceum 51.0 49.0 261 222 186 278 16.0
Prosopium williamsoni 50.7 49.3 258 222 188 279 17.0
Salmo salar 49.7 50.3 258 212 188 288 13.0
Salmo trutta 50.4 49.6 261 216 187 283 38.0
Salvelinus alpinus 50.3 49.7 257 219 189 282 40.0
Salvelinus fontinalis 49.7 50.3 256 215 190 286 24.0
Stenodus leucichthys 50.3 49.7 257 219 194 277 22.0
Thymallus arcticus 50.2 49.8 256 219 192 279 18.0
Export data
Other sections:
Total mtDNA
Total protein-coding genes
D-loop
Total tRNA-coding genes
Total rRNA-coding genes
ATP6
ATP8
COX1
COX2
COX3
CYTB
ND1
ND2
ND3
ND4
ND4L
ND5
ND6
16S rRNA gene
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.