Export data of D-loop for family Salmonidae

Species (N=19) GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Coregonus clupeaformis 39.5 60.5 266 162 325 330 50.0
Coregonus nasus 38.9 61.1 258 161 327 332 15.0
Hucho hucho 39.1 60.9 267 162 326 341 15.0
Hucho taimen 38.1 61.9 281 167 357 371 16.0
Oncorhynchus clarkii 38.6 61.4 235 152 307 309 10.0
Oncorhynchus gorbuscha 39.6 60.4 264 184 354 329 3.0
Oncorhynchus keta 39.2 60.8 240 152 303 306 7.0
Oncorhynchus kisutch 38.7 61.3 228 160 310 304 5.0
Oncorhynchus mykiss 38.5 61.5 230 156 310 307 11.0
Oncorhynchus nerka 39.4 60.6 236 160 303 305 8.0
Oncorhynchus tshawytscha 39.6 60.4 232 158 306 290 9.0
Prosopium cylindraceum 41.1 58.9 209 147 256 254 16.0
Prosopium williamsoni 40.0 60.0 272 165 327 329 17.0
Salmo salar 36.9 63.1 222 149 320 315 13.0
Salmo trutta 36.8 63.2 230 143 320 320 38.0
Salvelinus alpinus 37.6 62.4 226 149 302 321 40.0
Salvelinus fontinalis 38.4 61.6 219 151 286 308 24.0
Stenodus leucichthys 38.5 61.5 291 173 371 369 22.0
Thymallus arcticus 34.2 65.8 200 142 325 333 18.0
Export data
Other sections:
Total mtDNA
Total protein-coding genes
Total tRNA-coding genes
Total rRNA-coding genes
ATP6
ATP8
COX1
COX2
COX3
CYTB
ND1
ND2
ND3
ND4
ND4L
ND5
ND6
12S rRNA gene
16S rRNA gene
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.