Viewing data for Scomber scombrus
| Scientific name | Scomber scombrus |
| Common name | Atlantic mackerel |
| Maximum lifespan | 17.00 years (Scomber scombrus@AnAge) |
| Total mtDNA (size: 16560 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7773 | 8787 | 4918 | 2855 | 4219 | 4568 |
| Base content per 1 kb (bases) | 469 | 531 | 297 | 172 | 255 | 276 |
| Base content (%) | 46.9% | 53.1% | ||||
| Total protein-coding genes (size: 11416 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5460 | 5956 | 3631 | 1829 | 3005 | 2951 |
| Base content per 1 kb (bases) | 478 | 522 | 318 | 160 | 263 | 258 |
| Base content (%) | 47.8% | 52.2% | ||||
| D-loop (size: 864 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 320 | 544 | 183 | 137 | 258 | 286 |
| Base content per 1 kb (bases) | 370 | 630 | 212 | 159 | 299 | 331 |
| Base content (%) | 37.0% | 63.0% | ||||
| Total tRNA-coding genes (size: 1554 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 711 | 843 | 391 | 320 | 381 | 462 |
| Base content per 1 kb (bases) | 458 | 542 | 252 | 206 | 245 | 297 |
| Base content (%) | 45.8% | 54.2% | ||||
| Total rRNA-coding genes (size: 2670 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1254 | 1416 | 694 | 560 | 560 | 856 |
| Base content per 1 kb (bases) | 470 | 530 | 260 | 210 | 210 | 321 |
| Base content (%) | 47.0% | 53.0% | ||||
| 12S rRNA gene (size: 957 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 467 | 490 | 258 | 209 | 203 | 287 |
| Base content per 1 kb (bases) | 488 | 512 | 270 | 218 | 212 | 300 |
| Base content (%) | 48.8% | 51.2% | ||||
| 16S rRNA gene (size: 1713 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 787 | 926 | 436 | 351 | 357 | 569 |
| Base content per 1 kb (bases) | 459 | 541 | 255 | 205 | 208 | 332 |
| Base content (%) | 45.9% | 54.1% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 310 | 374 | 224 | 86 | 190 | 184 |
| Base content per 1 kb (bases) | 453 | 547 | 327 | 126 | 278 | 269 |
| Base content (%) | 45.3% | 54.7% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 77 | 91 | 55 | 22 | 38 | 53 |
| Base content per 1 kb (bases) | 458 | 542 | 327 | 131 | 226 | 315 |
| Base content (%) | 45.8% | 54.2% | ||||
| COX1 (size: 1560 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 734 | 826 | 440 | 294 | 447 | 379 |
| Base content per 1 kb (bases) | 471 | 529 | 282 | 188 | 287 | 243 |
| Base content (%) | 47.1% | 52.9% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 328 | 363 | 207 | 121 | 176 | 187 |
| Base content per 1 kb (bases) | 475 | 525 | 300 | 175 | 255 | 271 |
| Base content (%) | 47.5% | 52.5% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 380 | 405 | 242 | 138 | 204 | 201 |
| Base content per 1 kb (bases) | 484 | 516 | 308 | 176 | 260 | 256 |
| Base content (%) | 48.4% | 51.6% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 554 | 587 | 358 | 196 | 320 | 267 |
| Base content per 1 kb (bases) | 486 | 514 | 314 | 172 | 280 | 234 |
| Base content (%) | 48.6% | 51.4% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 467 | 508 | 313 | 154 | 268 | 240 |
| Base content per 1 kb (bases) | 479 | 521 | 321 | 158 | 275 | 246 |
| Base content (%) | 47.9% | 52.1% | ||||
| ND2 (size: 1046 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 522 | 524 | 368 | 154 | 256 | 268 |
| Base content per 1 kb (bases) | 499 | 501 | 352 | 147 | 245 | 256 |
| Base content (%) | 49.9% | 50.1% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 182 | 167 | 128 | 54 | 101 | 66 |
| Base content per 1 kb (bases) | 521 | 479 | 367 | 155 | 289 | 189 |
| Base content (%) | 52.1% | 47.9% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 649 | 732 | 442 | 207 | 364 | 368 |
| Base content per 1 kb (bases) | 470 | 530 | 320 | 150 | 264 | 266 |
| Base content (%) | 47.0% | 53.0% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 156 | 141 | 107 | 49 | 79 | 62 |
| Base content per 1 kb (bases) | 525 | 475 | 360 | 165 | 266 | 209 |
| Base content (%) | 52.5% | 47.5% | ||||
| ND5 (size: 1839 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 862 | 977 | 592 | 270 | 486 | 491 |
| Base content per 1 kb (bases) | 469 | 531 | 322 | 147 | 264 | 267 |
| Base content (%) | 46.9% | 53.1% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 246 | 276 | 159 | 87 | 81 | 195 |
| Base content per 1 kb (bases) | 471 | 529 | 305 | 167 | 155 | 374 |
| Base content (%) | 47.1% | 52.9% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.29%) 
Alanine (Ala, A)
n = 16 (7.05%) 
Serine (Ser, S)
n = 8 (3.52%) 
Threonine (Thr, T)
n = 20 (8.81%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 13 (5.73%) 
Leucine (Leu, L)
n = 58 (25.55%) 
Isoleucine (Ile, I)
n = 18 (7.93%) 
Methionine (Met, M)
n = 9 (3.96%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 12 (5.29%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 6 (2.64%) 
Asparagine (Asn, N)
n = 10 (4.41%) 
Glutamine (Gln, Q)
n = 7 (3.08%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 10 | 3 | 13 | 9 | 30 | 3 | 3 | 5 | 2 | 7 | 5 | 1 | 0 | 3 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 1 | 7 | 8 | 0 | 1 | 3 | 6 | 2 | 4 | 7 | 6 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 8 | 0 | 2 | 3 | 1 | 0 | 0 | 2 | 0 | 4 | 0 | 0 | 4 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 6 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 48 | 89 | 60 | 31 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 59 | 34 | 110 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 76 | 90 | 49 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWLAILVFTWSVFLIVIPPKVMAHTFPNEPTLQSTEKPKTESWNWPWH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 5 (9.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 4 (7.27%)
Leucine (Leu, L)
n = 5 (9.09%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 3 (5.45%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 2 | 0 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 0 | 0 | 2 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 5 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 10 | 17 | 17 | 12 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 19 | 14 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 19 | 22 | 9 | ||||||||||||
| COX1 (size: 1560 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 48 (9.25%)
Alanine (Ala, A)
n = 44 (8.48%)
Serine (Ser, S)
n = 29 (5.59%)
Threonine (Thr, T)
n = 34 (6.55%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 45 (8.67%)
Leucine (Leu, L)
n = 65 (12.52%)
Isoleucine (Ile, I)
n = 36 (6.94%)
Methionine (Met, M)
n = 22 (4.24%)
Proline (Pro, P)
n = 27 (5.2%)
Phenylalanine (Phe, F)
n = 41 (7.9%)
Tyrosine (Tyr, Y)
n = 20 (3.85%)
Tryptophan (Trp, W)
n = 19 (3.66%)
Aspartic acid (Asp, D)
n = 16 (3.08%)
Glutamic acid (Glu, E)
n = 13 (2.5%)
Asparagine (Asn, N)
n = 15 (2.89%)
Glutamine (Gln, Q)
n = 8 (1.54%)
Histidine (His, H)
n = 19 (3.66%)
Lysine (Lys, K)
n = 8 (1.54%)
Arginine (Arg, R)
n = 9 (1.73%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 19 | 6 | 21 | 13 | 24 | 3 | 3 | 5 | 3 | 15 | 12 | 15 | 3 | 14 | 27 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 16 | 0 | 1 | 8 | 19 | 14 | 3 | 9 | 13 | 19 | 7 | 8 | 8 | 10 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 16 | 3 | 9 | 10 | 5 | 1 | 0 | 4 | 6 | 14 | 1 | 1 | 5 | 10 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 11 | 2 | 3 | 13 | 8 | 0 | 1 | 1 | 6 | 1 | 0 | 1 | 0 | 0 | 18 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 166 | 124 | 120 | 110 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 82 | 130 | 99 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 46 | 186 | 160 | 128 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 16 (6.99%)
Serine (Ser, S)
n = 19 (8.3%)
Threonine (Thr, T)
n = 8 (3.49%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 20 (8.73%)
Leucine (Leu, L)
n = 29 (12.66%)
Isoleucine (Ile, I)
n = 19 (8.3%)
Methionine (Met, M)
n = 10 (4.37%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 10 (4.37%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 14 (6.11%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 6 (2.62%)
Glutamine (Gln, Q)
n = 7 (3.06%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 3 (1.31%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 8 | 6 | 8 | 5 | 12 | 4 | 0 | 5 | 2 | 5 | 5 | 5 | 5 | 2 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 4 | 7 | 5 | 0 | 0 | 3 | 6 | 0 | 1 | 9 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 4 | 1 | 1 | 8 | 7 | 0 | 0 | 3 | 2 | 7 | 0 | 0 | 3 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 9 | 5 | 3 | 11 | 3 | 0 | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 66 | 49 | 42 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 54 | 63 | 88 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 87 | 75 | 45 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 20 (7.69%)
Serine (Ser, S)
n = 13 (5.0%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 21 (8.08%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 12 (4.62%)
Methionine (Met, M)
n = 7 (2.69%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 6 (2.31%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 2 (0.77%)
Glutamine (Gln, Q)
n = 6 (2.31%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 6 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 5 | 2 | 6 | 9 | 11 | 3 | 2 | 6 | 0 | 5 | 7 | 8 | 1 | 9 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 2 | 5 | 9 | 6 | 0 | 3 | 6 | 11 | 2 | 2 | 8 | 2 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 17 | 1 | 0 | 6 | 3 | 0 | 0 | 4 | 2 | 10 | 1 | 0 | 0 | 2 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 8 | 1 | 0 | 6 | 2 | 0 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 70 | 52 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 46 | 66 | 54 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 106 | 94 | 47 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 33 (8.71%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 21 (5.54%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 32 (8.44%)
Leucine (Leu, L)
n = 61 (16.09%)
Isoleucine (Ile, I)
n = 21 (5.54%)
Methionine (Met, M)
n = 10 (2.64%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 33 (8.71%)
Tyrosine (Tyr, Y)
n = 12 (3.17%)
Tryptophan (Trp, W)
n = 13 (3.43%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 19 (5.01%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 8 (2.11%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 12 | 2 | 12 | 22 | 13 | 8 | 4 | 6 | 0 | 8 | 13 | 11 | 0 | 7 | 26 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 1 | 2 | 5 | 12 | 14 | 2 | 4 | 10 | 10 | 3 | 4 | 8 | 7 | 3 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 9 | 2 | 6 | 6 | 8 | 1 | 2 | 0 | 1 | 11 | 1 | 2 | 4 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 6 | 1 | 1 | 9 | 7 | 1 | 1 | 1 | 4 | 2 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 109 | 102 | 81 | 88 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 97 | 73 | 157 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 34 | 159 | 113 | 74 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.25%)
Alanine (Ala, A)
n = 39 (12.04%)
Serine (Ser, S)
n = 19 (5.86%)
Threonine (Thr, T)
n = 17 (5.25%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 19 (5.86%)
Leucine (Leu, L)
n = 61 (18.83%)
Isoleucine (Ile, I)
n = 25 (7.72%)
Methionine (Met, M)
n = 12 (3.7%)
Proline (Pro, P)
n = 25 (7.72%)
Phenylalanine (Phe, F)
n = 17 (5.25%)
Tyrosine (Tyr, Y)
n = 12 (3.7%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 11 (3.4%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 8 (2.47%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 12 | 3 | 8 | 21 | 24 | 4 | 4 | 4 | 2 | 6 | 5 | 8 | 0 | 9 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 9 | 0 | 0 | 10 | 13 | 14 | 2 | 2 | 8 | 5 | 2 | 3 | 15 | 7 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 4 | 2 | 6 | 5 | 5 | 0 | 1 | 2 | 5 | 7 | 1 | 0 | 3 | 8 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 8 | 3 | 2 | 2 | 7 | 1 | 0 | 1 | 5 | 2 | 0 | 0 | 1 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 90 | 101 | 76 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 97 | 58 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 115 | 106 | 76 | ||||||||||||
| ND2 (size: 1046 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.19%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 44 (12.68%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 78 (22.48%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 14 (4.03%)
Proline (Pro, P)
n = 22 (6.34%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 12 (3.46%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 8 | 6 | 17 | 22 | 17 | 15 | 6 | 10 | 2 | 2 | 3 | 2 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 5 | 22 | 12 | 2 | 5 | 5 | 8 | 0 | 7 | 6 | 7 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 23 | 13 | 3 | 6 | 4 | 5 | 0 | 0 | 7 | 2 | 5 | 0 | 1 | 3 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 4 | 2 | 0 | 3 | 8 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 116 | 103 | 53 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 122 | 53 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 130 | 111 | 70 | ||||||||||||
| ND3 (size: 1046 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.19%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 44 (12.68%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 78 (22.48%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 14 (4.03%)
Proline (Pro, P)
n = 22 (6.34%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 12 (3.46%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 8 | 6 | 17 | 22 | 17 | 15 | 6 | 10 | 2 | 2 | 3 | 2 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 5 | 22 | 12 | 2 | 5 | 5 | 8 | 0 | 7 | 6 | 7 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 23 | 13 | 3 | 6 | 4 | 5 | 0 | 0 | 7 | 2 | 5 | 0 | 1 | 3 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 4 | 2 | 0 | 3 | 8 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 116 | 103 | 53 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 122 | 53 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 130 | 111 | 70 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (5.66%)
Alanine (Ala, A)
n = 41 (8.93%)
Serine (Ser, S)
n = 28 (6.1%)
Threonine (Thr, T)
n = 43 (9.37%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 15 (3.27%)
Leucine (Leu, L)
n = 100 (21.79%)
Isoleucine (Ile, I)
n = 34 (7.41%)
Methionine (Met, M)
n = 25 (5.45%)
Proline (Pro, P)
n = 25 (5.45%)
Phenylalanine (Phe, F)
n = 14 (3.05%)
Tyrosine (Tyr, Y)
n = 15 (3.27%)
Tryptophan (Trp, W)
n = 18 (3.92%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 12 (2.61%)
Asparagine (Asn, N)
n = 14 (3.05%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 9 (1.96%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 16 | 14 | 23 | 31 | 28 | 4 | 12 | 9 | 2 | 4 | 3 | 7 | 1 | 6 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 11 | 1 | 3 | 1 | 25 | 14 | 1 | 4 | 10 | 7 | 5 | 8 | 10 | 5 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 16 | 4 | 3 | 8 | 6 | 2 | 4 | 5 | 5 | 10 | 1 | 2 | 4 | 10 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 8 | 4 | 3 | 1 | 9 | 0 | 0 | 3 | 6 | 2 | 0 | 0 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 98 | 144 | 134 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 68 | 128 | 76 | 188 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 41 | 170 | 158 | 91 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 1 (1.02%)
Methionine (Met, M)
n = 5 (5.1%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 1 (1.02%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (3.06%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 0 | 2 | 3 | 9 | 8 | 0 | 2 | 2 | 1 | 1 | 0 | 1 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 2 | 3 | 4 | 4 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 1 | 0 | 1 | 2 | 4 | 2 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 22 | 32 | 21 | 24 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 33 | 12 | 38 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 42 | 29 | 17 | ||||||||||||
| ND5 (size: 1839 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.07%)
Alanine (Ala, A)
n = 63 (10.29%)
Serine (Ser, S)
n = 41 (6.7%)
Threonine (Thr, T)
n = 57 (9.31%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 30 (4.9%)
Leucine (Leu, L)
n = 94 (15.36%)
Isoleucine (Ile, I)
n = 49 (8.01%)
Methionine (Met, M)
n = 27 (4.41%)
Proline (Pro, P)
n = 31 (5.07%)
Phenylalanine (Phe, F)
n = 38 (6.21%)
Tyrosine (Tyr, Y)
n = 12 (1.96%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 12 (1.96%)
Glutamic acid (Glu, E)
n = 12 (1.96%)
Asparagine (Asn, N)
n = 30 (4.9%)
Glutamine (Gln, Q)
n = 20 (3.27%)
Histidine (His, H)
n = 15 (2.45%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 10 (1.63%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 22 | 10 | 21 | 28 | 32 | 5 | 6 | 18 | 2 | 12 | 10 | 6 | 2 | 18 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 17 | 1 | 5 | 9 | 33 | 18 | 3 | 3 | 15 | 9 | 4 | 7 | 20 | 2 | 2 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 26 | 21 | 3 | 10 | 11 | 6 | 2 | 1 | 11 | 3 | 9 | 1 | 2 | 11 | 19 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 9 | 3 | 4 | 8 | 19 | 1 | 2 | 2 | 4 | 2 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 148 | 162 | 195 | 108 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 180 | 122 | 238 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 49 | 250 | 174 | 140 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (12.14%)
Alanine (Ala, A)
n = 20 (11.56%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 8 (4.62%)
Cysteine (Cys, C)
n = 5 (2.89%)
Valine (Val, V)
n = 24 (13.87%)
Leucine (Leu, L)
n = 28 (16.18%)
Isoleucine (Ile, I)
n = 4 (2.31%)
Methionine (Met, M)
n = 8 (4.62%)
Proline (Pro, P)
n = 6 (3.47%)
Phenylalanine (Phe, F)
n = 9 (5.2%)
Tyrosine (Tyr, Y)
n = 9 (5.2%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 5 (2.89%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 4 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 1 | 0 | 3 | 2 | 1 | 4 | 9 | 0 | 0 | 10 | 2 | 6 | 6 | 6 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 5 | 0 | 10 | 3 | 3 | 4 | 3 | 3 | 8 | 7 | 3 | 1 | 1 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 0 | 1 | 4 | 2 | 2 | 1 | 1 | 2 | 8 | 1 | 2 | 9 | 0 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 3 | 2 | 1 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 21 | 24 | 56 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 43 | 20 | 73 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 48 | 23 | 37 | 66 | ||||||||||||
| Total protein-coding genes (size: 11438 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 243 (6.38%)
Alanine (Ala, A)
n = 357 (9.37%)
Serine (Ser, S)
n = 238 (6.25%)
Threonine (Thr, T)
n = 296 (7.77%)
Cysteine (Cys, C)
n = 28 (0.74%)
Valine (Val, V)
n = 237 (6.22%)
Leucine (Leu, L)
n = 666 (17.48%)
Isoleucine (Ile, I)
n = 247 (6.48%)
Methionine (Met, M)
n = 154 (4.04%)
Proline (Pro, P)
n = 221 (5.8%)
Phenylalanine (Phe, F)
n = 229 (6.01%)
Tyrosine (Tyr, Y)
n = 115 (3.02%)
Tryptophan (Trp, W)
n = 121 (3.18%)
Aspartic acid (Asp, D)
n = 78 (2.05%)
Glutamic acid (Glu, E)
n = 106 (2.78%)
Asparagine (Asn, N)
n = 122 (3.2%)
Glutamine (Gln, Q)
n = 90 (2.36%)
Histidine (His, H)
n = 106 (2.78%)
Lysine (Lys, K)
n = 72 (1.89%)
Arginine (Arg, R)
n = 77 (2.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 130 | 117 | 56 | 142 | 185 | 212 | 57 | 52 | 73 | 17 | 76 | 71 | 71 | 19 | 90 | 139 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 98 | 11 | 17 | 63 | 161 | 115 | 18 | 36 | 81 | 92 | 34 | 52 | 100 | 58 | 11 | 52 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 111 | 113 | 20 | 49 | 70 | 55 | 10 | 9 | 45 | 34 | 81 | 12 | 18 | 37 | 85 | 26 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 80 | 81 | 25 | 19 | 59 | 67 | 5 | 6 | 13 | 45 | 13 | 0 | 1 | 5 | 1 | 109 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1021 | 1090 | 946 | 753 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 524 | 1058 | 695 | 1533 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 359 | 1415 | 1204 | 832 | ||||||||||||
>NC_006398.1 Scomber scombrus mitochondrion, complete genome GCTAGCGTAGCTTAAAACAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAAAAGCCCCGTAAGCAC AAAGGTTTGGTCCTGACTTTACTGTCAGCTTTAGCTAAACTTACACATGCAAGTATCCGCACCCCCGTGA GAATGCCCTAACAGTCATCCATGCGAAGACAAGGAGCTGGTATCAGGCTCACCCACAAAGCCCACGACGC CTTGCTCAGCCACACCCCCAAGGGAATTCAGCAGTGATTAACATTAAGCCATGAGTGAAAACTTGACTTA GTTAAAGCTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGATAGGCCCAAGTTGACAGA CCCCGGCGTAAAGCGTGGTTAGGGAAAATTTAAAACTAAAGCCGAACACCTTCAGGGCAGTCATACGCTT CCGAAGGCACGAAGCCCCTCCACGAAAGTGGCTTTACTACCCCCGACCCCACGAAAGCTAGGACACAAAC TGGGATTAGATACCCCACTATGCCTAGCCGTAAACATTGATAGAATTATACACCCTTCTATCCGCCTGGA TATTACGAGCATTAGCTTGAAACCCAAAGGACTTGGCGGTACTTTAGATCCCCCTAGAGGAGCCTGCTCT ATAACCGATAACCCCCGTTAAACCTCACCCTCCCTTGTTTTTTCCGCCTATATACCACCGTCGTCAGCTC ACCCTGTGAAGGTCTAATAGTAAGCAAAATTGGCACAGCCCAGAACGTCAGGTCGAGGTGTAGCGCATGG GAGGGGAAGAAGTGGGCTACATTCGCTAACTTAGCGAATTACGGACGATGAATTGAAAACATTCATCCTT GAAGGAGGATTTAGCAGTAAGTGGAAAATAGAGTGTTCCACTGAAATCGGCTCTGAAGTGCGTACACACC GCCCGTCACTCTCTCCAAGCTCACCCACCCATTCAACATAACTAATTACCCATAAACTGCAAAGGAGAGG CAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAAAAATCAGAGTATAGCTAAAATAGTATAG CATTTCCCTTACACTGAAAAGTCATCCGTGCGAACCGGATTACCCTGACGCCCACTAGCTAGCCCGTCCT AGCAAAATCAACAATCCAATGTAAATAACCCCAAACACACATCACCTTCCACTAAACAAAGCATTTTTCC CCCTTAGTATGGGAGACAGAAAAGGAACTATCGGAGCAATAGAGAAAGTACCGCAAGGGAACGCTGAAAG AGAAATGAAACAACCCAGTGAAGCCTAAAAAAGCAGAGATTTTACCTCGTACCTTTTGCATCATGATTTA GCTAGTACTACCCAAGCAAAGAGCACTTTAGTTTGGGCCCCCGAAACTAGGTGAGCTACTCCAAGACAGC CTATCAATAGGGCAAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTTCGAGTAAAGGTGACAGACCTA CCGAACCTAGTTATAGCTGGTTGCCTGAGAAATGGATAGGAGTTCAGCCTCTAGGCTTCTTTATTCGCTA AGGCTCCATTCCGGCATCCTCACCGAGATTCTAAAGAAACCTAGAGAGTTATTCAAAGGGGGTACAGCCC CTTTGAAACAAGACACAACTTTCCCAGGAGGGTAAAGATCATAATTACTAAAGGTAATCTAATGCCTAAG TGGGCCTAAAAGCAGCCATCCCTACAGAAAGCGTTACAGCTCAAGCATTAAACCTCAACCACATATCCGG ATAACCCAATCCTAGCCCCCTAACACTATCAGGCCGTCTCATGCAAACATGAGAGCGCACATGCTAATAT GAGTAACAAGAGAGCACCCGCCTCTCTCCTCGCACACGTGTAAATCGGAACGAACCCCCACCGAAACTTA ACGGACCCAAACGAAGAGGGTAATGAACTTTAAACAAAGAACTGGAAAACCATTCAACAAACAACCGTTA ACCCCACACTGGTGTGCCCCCGGGGAAAGACTAAAAGAAAAAGAAGGAACTCGGCAAACCTTATCAAGCC TCGACTGTTTACCAAAAACATCGCCTTTTGCAAAAACAAAGAATAAAAGGTCGAGCCTGCCCAGTGACTA TATGTTCAACGGCCGCGGTATTTTAACCGTGCAAAGGTAGCGCAATCACTTGTCTTTTAAATGAAGACCT GTATGAATGGTATTACGAGGGCTTAACTGTCTCCTTTTTCAAGTCAGTGAAATTGATCTCCCCGTGCAGA AGCGGGGATAAAACCATAAGACGAGAAGACCCTATGGAGCTTTAAGACACTGAGCCATATCAAGTTAAAC ACCCCCAAACAAGGGACTAAACTTATTGAAATCATTGGCCGTATGTCTTCGGTTGGGGCGACCATGGGGA AACAAAAAACCCCCACGTGGAATGGGAGCACAACTACTCCTACAGTCAAGAGCCACCACTCTAACAAACA GAATTTCTGACCAATAACTGATCCGGCAACGCCGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCA ATCCCCTTTTAGAGCCCCTATCGACAAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGT GCAGCCGCTATTGAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGAAA TCCAGGTCAGTTTCTATCTATGATATGTTCTTTTCTAGTACGAAAGGACCGAAAAGAAGAGGCCAATGCT CAAAGCACGCCTCACCTCCCCCTATTGAAAGCAACTAAAATAGGCAGAAGGGCATACCCCTTCATGCCTA GATAGCGGCATGTTGGTGTGGCAGAGCCCGGTTACTGCAAAAGACCTAAGCCCTTTCAACAGAGGTTCAA GTCCTCTCTCCAACTATGATCAAGCCCCTAGTAGAGTACATTCTAAACCCCCTAGCTTACATCGTACCAG TCCTACTGGCTGTAGCTTTCCTGACCCTTATCGAACGGAAAGTTCTAGGCTATATACAACTACGAAAAGG TCCCAACATCGTCGGACCATACGGCCTCCTCCAACCAATCGCAGACGGAGTTAAACTATTTATTAAAGAA CCCGTACGCCCCTCTACAGCTTCCCCCGTTCTCTTCCTCCTAGCCCCCATGCTAGCCCTCACCCTTGCAC TCACTCTTTGGTCCCCCATACCCCTCCCACACCCTGTTGTTGACCTTAACCTAGCAATTTTATTTATCCT TGCTATGTCAAGTCTAACGGTTTATTCCATCTTAGGCTCAGGATGAGCATCAAATTCAAAATACGCTCTG ATTGGCGCACTACGGGCCGTAGCCCAGACTATTTCTTACGAAGTAAGCCTAGGCCTCATTCTCCTAAACG CAATTATCTTTACAGGGGGATTTACCTTACAAACCTTCAGCACTGCCCAAGAAGCCATCTGACTAATTAT CCCAGCCTGACCCCTAGCAGCAATATGATATATTTCTACTCTAGCAGAGACTAACCGAGCCCCCTTCGAT CTCACAGAGGGGGAATCTGAACTAGTCTCTGGCTTTAATGTCGAATATGCGGGAGGTCCTTTTGCACTCT TTTTCCTAGCAGAATATGCTAACATTCTCCTCATGAATACCCTTTCCGCCATGCTTTTCCTAGGCGCCTC TCATATCCCCGCAATGCCCGCTCTTACGACAGCTAACCTAATGATTAAAGCGGCTCTCCTCTCAATGGTA TTCCTATGAGTCCGAGCCTCCTACCCACGATTTCGATACGATCAGCTCATGCACCTCATCTGAAAAAACT TCCTCCCCCTCACCCTAGCCTTAGTAATTTGACATCTCGCCCTCCCCATTGCATTTGCAGGCCTACCACC TCATCTGTAAGTACAGGATTCGTGCCTGAATTTTTAAGGACCACTTTGATAGAGTGAACTATGGGGGTTA AAGTCCCCCCGACTCCTTAGAGAGAAGGGGTTTGAACCCTACCTAAAGAGATCAAAACTCTTTGTGCTTC CACTACACCACTCCCTAGTAAAATAAGCTAAATCAAGCTATTGGGCCCATACCCCGAAAATGTAGGTTAA AACCCTTCTTTTACTAATGAGCCCCTACATCTTAGCCACCCTCCTATTTAGCCTCGGCCTAGGCACCACC ATTACGTTCGCAAGCTCCCACTGACTCCTTGCATGAATAGGACTAGAGATAAATACCCTCGCCATTATTC CCCTAATGGCACAAAACCACCACCCGCGAGCGGTCGAGGCCACCACCAAATATTTCCTTACCCAGGCAAC CGCAGCCGCAATGCTCCTGTTTGCCAGCACAACCAATGCTTGACTTACCGGCGAATGAAGCATTGAACAA ATAACTCACCCTGTCCCGACCACAATGATAATTATTGCCCTGGCACTAAAAATTGGTCTCGCCCCAGTCC ACGCTTGACTACCAGAAGTTCTCCAAGGACTAGACCTGACCACAGGTCTTATCTTATCTACATGACAAAA ACTTGCACCCTTCGCCCTACTCCTTCAAATTCACCCTGCGGACCCAACAATCCTTATAGGACTGGGACTG GCTTCTACGCTGGTTGGTGGCTGAGGCGGTCTAAACCAAACTCAGCTCCGAAAAATCCTGGCCTACTCTT CAATCGCCCACCTTGGATGAATGATTCTGATTCTGCAATTCTCACCATCTCTAACCCTCCTAGCCCTTCT TACGTACTTCATCATGACATTTTCAACCTTCCTGGTGTTTAAACTTAACAAAGCCACAAACATCAACTCA CTCGCTACCTCCTGAGCAAAAACCCCTGCCCTTACAGCCCTCACCCCTCTCATCCTACTGTCTCTCGGAG GACTTCCCCCTTTAACAGGTTTTATGCCAAAGTGACTAATTCTCCAAGAACTCTCAAAACAAGACCTGGC CCCAGTAGCAACCGTAGCCGCCCTTAGCGCCCTCTTAAGCCTGTACTTTTACTTGCGCTTAACCTATGCC ATGACTCTGACAATATCCCCAAATAACCTCACCGGAACCGCCACCTGACGCCTCCCCTCTCTACAACTTA CCCTCCCTCTGGCCACATCCCTAATTGCTACACTCTGCCTCCTACCCCTAACTCCTGCCGCAACAGCATT ACTTACTCTTTAAGGGACTTAGGATAGCACTAGTCCAAGAGCCTTCAAAGCCCTCAGCGGGGGTGAAAAT CCCCCAGGCCCTGACTAAGACTTGCGGGACACTACCCCACATCTCCTGCATGCAAAACAGACACTTTAAT TAAGCTAAAACCTTCCTAGACAGGCAGGCCTCGATCCTACAAACTCTTAGTTAACAGCTAAGCGCCCAAA CCAGCGAGCATCCGTCTACTTTCCCCGCCTCCTTTCGTCGGGAGAGGCGGGGAAAGCCCCGGCAGACGAT TAGTCTGCTCCTGAAGATTTGCAATCTTTCGTGCTAAAACACCTCAGAGCTTGGTAAGAAGAGGGCTCAA ACCTCTGTATATGGGGCTACAATCCACCGCTTACTCAGCCATCCTACCTGTGGCAATCACCCGCTGATTT TTCTCAACAAACCATAAAGACATCGGCACCCTCTACCTAGTATTTGGTGCATGATCTGGAATAGTTGGCA CGGCCTTAAGCTTGCTTATCCGAGCCGAACTAAGCCAACCAGGGTCCCTTCTCGGCGACGACCAAGTTTA TAACGTAATTGTTACGGCCCATGCCTTCATTATAATCTTCTTTTTAGTAATACCAGTCATGATTGGAGGG TTCGGAAACTGACTTATCCCCCTAATGATCGGAGCCCCCGATATAGCGTTCCCCCGAATGAATAACATAA GCTTCTGACTTCTTCCCCCTTCTCTCCTACTACTCCTGTCTTCTTCGGCAGTTGAAGCTGGAGCCGGAAC TGGCTGAACAGTCTACCCCCCACTAGCTGGTAACCTAGCGCATGCCGGGGCATCAGTTGACCTAACCATC TTCTCCCTTCACCTAGCAGGTGTTTCCTCAATTCTTGGGGCCATTAACTTCATCACAACAATTATTAATA TGAAACCTGCAGGTATCTCTCAATACCAAACCCCTCTGTTCGTCTGAGCAGTCCTAATTACAGCTGTTCT TCTACTCCTATCTCTGCCAGTCCTTGCTGCCGGCATTACAATGCTTCTAACTGATCGAAATCTTAATACC ACTTTCTTTGACCCCGGAGGAGGAGGAGATCCTATTCTTTACCAACATCTATTCTGATTCTTCGGACACC CAGAAGTCTACATTCTTATCCTCCCAGGATTCGGAATGATTTCCCACATCGTTGCCTACTACGCCGGTAA AAAAGAACCCTTCGGCTACATGGGCATGGTATGAGCCATGATGGCCATCGGCCTACTAGGCTTTATTGTC TGAGCCCACCACATGTTTACAGTTGGAATGGACGTAGACACACGAGCATACTTTACATCCGCAACTATAA TTATCGCAATCCCAACTGGCGTAAAAGTCTTTAGCTGACTTGCGACCCTTCACGGAGGTGACCTAAAATG GGACGCCCCATTCTTATGAGCTCTCGGCTTTATCTTCCTCTTTACAGTGGGAGGTCTTACTGGGATCGTC CTCGCCAATTCCTCTCTAGACATCGTACTCCACGACACGTACTACGTTGTAGCCCACTTCCACTACGTAC TCTCCATGGGTGCTGTCTTTGCCATTCTTGGCGGGTTCGTTCACTGATTCCCGCTATTTACAGGGTATAC CCTACACGAAACATGAACAAAAATTCACTTCTGAGTAATGTTTGCAGGTGTAAACGTTACATTCTTCCCA CAGCACTTCCTTGGACTAGCTGGAATGCCTCGACGGTATTCCGACTACCCAGACGCCTATACTCTTTGAA ACACAGTCTCCTCTATTGGATCCCTCATCTCACTTGTAGCAGTAGTCGTGTTCCTATATATCCTCTGAGA AGCATTTGTTTCTAAACGTGAAGTTCAGTCAGTAGAACTAGCTGAATATAACCTAGAATGACTTCACGGC TGCCCTCCTCCCTACCACACATTCGAGGAGCCTGCATTCGTAATGGTTCAGACTAACTGACGAGAAAGGG AGGATTCGAACCCCCGTAGGCTGGTTTCAAGCCAACCACATTAACCACTCTGCCACTTTCTTTATAAGAA ACTAGTAAAATTACTATTACACTGCTTTGTCAAGGCAGAGTTGTGGGTGGGACTCCCGCGTTTCTTGATT AAACAATGGCACATCCCTCACAGCTAGGATTCCAAGATGCAGCTTCACCCCTAATAGAAGAACTTCTACA CTTCCACGACCATGCCCTAATAATCCTGTTCCTAATTAGCTCATTTGTACTTTACATTATTGTGGTTATA ATTTCAACTTCCCTTACCAACAAATATGTGCTAGACTCCCAAGAGATCGAGATTATCTGAACGGTGCTCC CCGCCGTCATTCTTATTCTCATCGCCCTCCCCTCCCTTCGGATCCTTTACCTAATGGACGAGATCAATGA CCCACACCTGACAATTAAAGCCGTAGGACATCAATGATACTGAAGCTACGAATACACAGACTACGAAGAC CTAGGCTTCGATTCTTATATAATCCCCACCAATGACCTCGCCCCTGGCCAATTCCGGCTGCTTGAAGCAG ATCACCGAATGGTAGTCCCAGTTGAGTCACCCGTTCGAGTCCTAATTTCCGCTGACGACGTCCTCCACTC ATGAGCTGTCCCCTCCCTAGGAGTAAAAATAGACGCAGTGCCCGGACGACTAAACCAAACAGCCTTCATT ACATCCCGACCAGGAGTGTTCTACGGCCAGTGTTCCGAAATCTGCGGAGCTAATCACAGCTTCATGCCCA TTGTAGTTGAAGCAGTTCCACTAGAACACTTTGAGAACTGATCATCCCTGATACTTGAAGACGCCTCGCT AAGAAGCTAAATTGGGCATAGCGTTAGCCTTTTAAGCTAAAGATTGGTGGCCCCCACCCACCCCTAGCGA CATGCCTCAGCTCAACCCAGCACCCTGGCTTGCTATCCTGGTCTTTACATGATCAGTCTTCTTAATCGTC ATTCCCCCAAAAGTTATGGCACACACCTTTCCAAACGAACCAACCCTTCAAAGCACCGAAAAACCTAAAA CAGAATCCTGAAACTGACCATGGCACTAAACTTCTTCGACCAATTTATATCTCCTGTTTACCTAGGCATC CCCCTAATAGCCCTGGCCCTAACACTGCCCTGAATCCTCTTCCCTACCCCCACACTCCGATGACTAAATA ATCGACTACTCACTCTACAAAACTGATTTATCGGGCGATTCACCCACGAACTACTCCTTCCAGTAAACGT CCCCGGACACAAATGAGCACTACTTCTAGCATCCCTTATGCTATTCCTAATTTCCCTAAACATGCTAGGA CTACTCCCATACACCTTCACCCCTACCACACAGCTCTCACTAAATATGGGCCTAGCCGTTCCCTTCTGAT TAGCAACAATCATTATCGGGATGCGAAACCAACCAACTGAATCTCTAGGACATCTTCTACCAGAAGGAAC TCCTACTCTTCTTATTCCAGTCCTAATTATTATCGAAACTATTAGCCTATTTATTCGACCCCTCGCCCTT GGAGTTCGACTAACAGCCAATCTTACAGCCGGCCACCTTTTAATTCAGCTAATCGCAACAGGTGCATCCG TCCTCCTTCCACTAATGCCCACCGTTGCAATCCTAACAGGAATCTTACTATTCCTACTGACCCTTCTAGA AGTTGCCGTCGCAATAATCCAAGCTTACGTTTTCGTTCTTCTCCTAAGCCTTTACCTACAAGAAAACGTC TAATGGCCCACCAAGCACACGCATACCATATAGTTGACCCCAGCCCCTGGCCTTTAACAGGAGCAGTTGC TGCCCTACTAATGACATCAGGTCTCGCCATCTGATTCCACTTCCACTCCACAACACTAATAACTGTCGGA CTCATTCTCCTTCTTCTAACAATGTACCAATGATGACGAGACGTCGTCCGAGAAGGAACCTTTCAAGGTC ACCATACACCCCCTGTACAAAAAGGACTCCGATACGGTATGATTCTTTTTATTACCTCAGAAGTATTTTT CTTTGTAGGCTTCTTCTGAGCCTTTTACCACGCCAGCCTGGCTCCAACTCCCGAGCTAGGCGGCTGCTGA CCACCCACAGGAATTACGACCCTTGACCCCTTCGAAGTTCCCCTGCTAAACACAGCAGTCCTTCTCGCTT CCGGGGTAACAGTAACTTGAGCCCACCATAGCATTATGGAAGGGAACCGAAAAGAAACAGTCCACTCCTT AACACTAACAATTCTCCTAGGCTTCTATTTTACCTTCCTCCAAGGACTAGAATACTATGAAGCTCCCTTT ACAATTGCAGACGGAGTGTACGGATCCACATTCTTTGTAGCCACAGGCTTCCACGGACTCCATGTTATCA TCGGCTCCACATTCCTAGCCATCTGCCTCCTTCGACAAGTACGCTACCATTTCACAAGCGACCACCACTT CGGATTCGAAGCAGCTGCCTGATACTGACACTTTGTAGACGTTGTCTGACTATTCCTGTACGTCTCCATC TACTGATGAGGATCATAATCTTTCTAGTATTAATCTTAGTATAAGTGACTTCCAATCACCCGGTCTTGGT TAAAATCCAAGGAAAGATAATGAACCTGCTTACATTTATCATAATCCTCACCGCCCTACTTTCCGGCGTC CTAGCACTTGTCTCTTTCTGACTCCCCCTAATATCGCCCGACTACGAAAAGCTCTCCCCTTACGAATGTG GCTTTGACCCCCTCGGATCAGCCCGTCTCCCATTTTCACTCCGCTTCTTTCTAGTCGCCATTCTCTTCCT GCTCTTCGATCTGGAAATTGCCCTCCTACTACCTCTTCCCTGGGGAGACCAACTACCATCCCCCCTCCTT ACCTTTCTCTGAGCCTCCGCCGTACTAGCCCTCCTAACACTAGGCCTAATTTACGAATGACTCCAAGGAG GCCTAGAGTGGGCTGAATAGGCAATTAGTCTAAGAAAAACACTTGATTTCGGCTCAAGAACTTGTGGTTA AAGTCCATAATTGCCTAATGACCCCTGTTCACTTCGCTTTTTCAACCACCTTCATGCTCGGCCTAACAGG TTTAGCATTCCACCGAACCCACCTACTCTCAGCCCTCTTGTGCCTAGAAGCGATAATACTCTCCCTCTTT ATTGCCCTCTCGACCTGAACCCTTCAATTAGGTTCAACCAGCTTTTCGGCCTCTCCCATGCTTCTCCTCG CTTTCTCAGCTTGTGAAGCAAGCGCAGGGCTAGCCCTTCTAGTAGCAACCTCCCGGACTCACGGGAGCGA CCGCCTACAGAGCCTAAACCTCCTACAATGCTAAAAATCCTCATCCCTACACTTATGCTTGTTCCCACAA CCTGACTGGCACCCGCGAAATGGTTGTGACCCACCACTCTGGCCCACAGTCTTATTATTGCCTTAGCCAG CCTAACCTGATTAGAGAACCTTTCGGAAACAGGGTGAACCTCTTTAAACCTCTATATGGCCACAGATCTC CTATCGACCCCTCTACTTGTCCTCACCTGCTGACTCCTCCCACTTATGATCCTAGCCAGCCAGAATCACA CAGCCCTTGAGCCAATTAACCGGCAACGAATATATATTACTCTCCTCACATCCCTACAAATCTTTCTCAT CATAGCATTCAGTGCCACCGAGATTATTATATTCTATGTTATATTTGAAGCCACCCTTATTCCTACCTTA GTAATTATTACTCGCTGAGGCAACCAAACGGAACGACTTAATGCAGGCACTTACTTCTTATTCTACACGC TAGCAGGTTCCCTACCTCTCCTCGTCGCCCTACTGCTCCTCCAAAATAGTACAGGAACACTATCACTCCT CACCCTCCAATACGCTGCCCCTCTACAACTAACGTCTTACGCCGATAAATTATGATGAGCAGGCTGCTTA CTAGCCTTCCTAGTAAAAATACCTCTCTACGGTGTACACCTTTGACTCCCGAAAGCACACGTAGAAGCCC CCATCGCAGGGTCAATGATTCTTGCCGCCGTACTTCTTAAACTAGGCGGCTACGGAATAATGCGCATGAT GATTATACTAGATCCATTAACCAAAGAACTCAGCTACCCCTTTATCGTCTTCGCCTTGTGAGGAGTAATT ATAACCGGCTCCATCTGTCTACGACAGACAGACCTAAAATCCCTAATTGCCTACTCATCTGTAAGTCATA TAGGCCTCGTTGCAGGCGGAATCCTCATCCAAACACCTTGAGGCTTTACAGGGGCCCTCATCCTTATAAT CGCACACGGTCTTACATCCTCCGCCCTATTCTGCTTAGCAAACACGAACTATGAACGAACCCATAGCCGA ACAATAGTTTTAGCACGAGGCCTACAAATGGTGCTTCCCCTTATAACAACCTGATGATTTATTGCCAGCC TTGCAAACCTAGCCTTACCGCCCCTCCCAAATCTTATAGGAGAGCTCATGATTCTTACCTCCCTATTTAA CTGATCCTACTGAACACTAGCACTAACAGGAGCCGGGACCTTAATTACTGCAGGATACTCACTCTATATG TTCCTAATAACCCAACGGGGGCCTCTCCCAAACCACATCATCGCCCTCAACCCCTCACACTCACGCGAAC ACCTACTCATCGCCCTCCACCTTCTCCCCCTGATTCTTCTTATCCTCAAACCCGAACTAATTTGAGGTTG AACCGCCTGTAGATATAGTTTAAAGCTAAAACATTAGACTGTGGCTCTAAAGATGGGGGTTAAAATCCCC CTACTTACCGAGAGAGTCTCGCTAGAAACGAAAACTGCTAATTTTCGCGACCCTGGTTGGACCCCAGGGC TCACTCGAACAGCTTCTAAAGGATAACAGCTCATCCGCTGGTCTTAGGAACCAGAAACTCTTGGTGCAAA TCCAAGTAGCAGCTAATGACTTCCACCTCCGTAACAATAACAACAAGCCTAATCATTATCTTCTCCCTAC TCGCCTACCCCGTATTTACAACCCTCTCCCCCCAACCCCAAGCCCCTAACTGAGCAGTTACACAAGTCAA AACTGCGGTTAAACTGGCATTTTTCGTCAGCCTCCTCCCCCTCTTTCTATTTATAAACGAGGGGGCCGAA ACAATTATTACTAACTGGAACTGAATAAATACCCTCACTTTTGACGTCAATATCAGCCTTAAATTTGACC ACTACTCGATTATTTTTACCCCTATTGCACTCTACGTGACATGATCTATTCTTGAATTTGCTTCATGATA TATGCATGCCGACCCCTACATGAATCGATTCTTTAAATACCTACTAGTCTTCCTCATCGCTATGATTATT CTAGTTACAGCAAACAACATGTTTCAACTATTTATCGGCTGAGAAGGCGTTGGAATCATGTCTTTCCTCC TAATCGGCTGATGATACGGACGTGCAGATGCAAATACAGCAGCCCTACAAGCTGTTGTATATAACCGGGT TGGGGATATTGGCCTTATTCTTGCCATAGCATGAATGGCAACTAACCTAAACTCCTGAGAAATACAACAA ATATTTGCAGCCGCCAAAGACCTCGACCTAACCCTGCCACTTTTAGGCCTAATTGTTGCCGCCACCGGCA AATCCGCACAATTTGGCCTTCACCCCTGACTCCCCTCTGCCATGGAGGGCCCCACACCGGTCTCTGCCCT ACTTCACTCTAGCACAATGGTCGTTGCTGGTATTTTTCTACTAATTCGAATGAGCCCCCTTTTAGAAAAC AATCAGACGGCTCTTACCCTCTGCCTCTGCCTCGGAGCACTAACCACCCTATTTACCGCCACCTGCGCCC TAACCCAAAATGATATCAAAAAAATCGTTGCATTCTCAACATCAAGCCAACTTGGGCTAATGATAGTAAC AATTGGGCTTAATCAACCCCAACTTGCCTTCCTTCACATCTGTACGCACGCCTTCTTCAAAGCTATGCTT TTCCTCTGCTCCGGCTCAATTATCCATAGCCTAAATGACGAACAGGACATCCGCAAAATAGGAGGAATGC ATCACCTCACCCCCTTCACCTCTTCCTGCTTAACCGTTGGAAGCCTCGCACTAACAGGAACCCCCTTCTT AGCGGGCTTTTTCTCTAAAGATGCCATTATTGAGGCACTCAACACATCCCATCTTAACGCCTGAGCCCTC ACACTGACCCTCCTTGCCACCTCATTCACAGCCATCTACAGCCTTCGTGTCGTTTTCTTCGTGGCCATGG GCCACCCCCGATTCAACGCTCTTTCCCCCATTAACGAAAACAACCCCACAGTAATTAACCCCATCAAACG ACTAGCCTGAGGAAGCATTATTGCCGGCCTCCTAATCACCTCTAATATTACTCCCTTAAAAACACCTATC ATGTCTATACCTCCCCTGCTAAAACTAGCAGCCCTAATCGTCACTATCCTCGGCCTTCTCACCGCGCTAG AATTGGCATCACTAACAAGCAAACAATTTAAGCCTACCCCGGCTCGGGCCCCCCACCACTTCTCTAATAT GCTTGGCTTCTATCCCCACATCATTCACCGCTTTGCACCAAAACTTAACCTGATCCTAGGACAAACCATC GCCGGCCAATTAGTCGACCAAACCTGACTAGAAAAAGCCGGTCCTAAAGCCCTCGCCTCGGCCAACATGC CTCTAATTACGACCACAAGTAATATTCAACAAGGTGTTATTAAAACCTACCTCGCCTTGTTCCTCCTCAC CATAGCCCTCGCTATCCTAGTAGTCTCCTACTAAACTGCCCGAACAGTCCCACGACTTAATCCTCGGGTT AATTCAAGAACTACAAACAAAGTGAGAAGAAGTGCCCACGCGCTAATCACTAACAAACCTCCCCCCGAAG AATACATTAAGGCTACTCCACCCGTATCCCCTCGAAACACGGAGAAAGTCTCCATATCGTCCACGGGAAC TCAAGAAGTTTCATATCAGCCCCCTCAAAAGAACATACATCCTAAAGCCACTCCTACCATATAAACCAAG ATGTACATAGCAACAGCTGGGCTTCCCCAAGTCTCCGGATAAGGCTCAGCGGCCAAAGCCGCTGAATAAG CAAAGACAACCAACATTCCCCCCAAATAAATTAAAAAGAGCACCAGTGACAAAAAGGAGCCCCCATGGGC TACCAGAACACAACACCCCATGCCCGCTACAGCAACCAGACCCAAAGCAGCGAAATAAGGAGAAGGGTTA GAAGCAACCGCGACTAGTCCTAATACTAAACAAATTAACAGCACACACAATGCATAAGTCATAATTCCTG CCAGGATTTTAACCAGGACTAATGGCTTGAAAAACCACCGTTGTTATTCAACTACAAGAACCCTAATGGC AAGTCTTCGAAAAACACACCCACTGCTAAAAATCGCTAACGACGCTCTAGTCGATCTCCCAAGTCCCGCC AACATTTCAGTATGATGAAACTTCGGTTCCCTGCTTGGTCTCTGTTTAGCTTCCCAAATCCTCACAGGAC TATTCCTTGCAATGCACTACACGCCCGACGTCGAATCAGCATTCAACTCAGTCGCCCATATTTGCCGGGA CGTAAACTTCGGATGACTCATCCGCAACATGCACGCAAACGGTGCCTCTTTCTTCTTCATTTGCCTCTAC CTCCACATCGGACGAGGCCTGTACTACGGCTCATACCTTTTTGTAGAGACATGAAACGTCGGTGTAGTCC TCCTCCTCCTCGTAATGATGACTGCCTTCGTTGGCTACGTCCTTCCCTGAGGACAAATGTCCTTCTGAGG GGCCACTGTCATCACTAACCTACTCTCAGCAGTTCCATACGTAGGCACAACACTCGTTGAATGAATTTGA GGGGGCTTCTCAGTAGACAATGCTACTCTCACTCGGTTCTTCGCCTTTCACTTCCTATTCCCCTTTGTTA TCTTAGCGGCAGCGGTTCTCCACCTACTATTCCTTCATGAAACTGGGTCAAACAACCCAATTGGCCTAAA CTCTAATGCAGACAAAATCTCGTTCCATCCGTACTTTACGTATAAAGACCTCCTCGGCTTTGCCGTTCTC CTTATAGGCCTTACCTCCCTAGCACTCTTCTCCCCGAACCTCTTAGGAGACCCAGACAATTTTACACCCG CCAATCCAATGGTTACCCCTCCCCACATCAAGCCTGAATGATACTTCCTGTTTGCATACGCAATCCTTCG TTCTATTCCTAACAAATTAGGAGGAGTATTGGCTCTCCTGGCCTCTATTCTGATCCTGATAGTCGTCCCC TTCCTCCACACATCTAAACAACGAGCCCTGACATTCCGACCGGCCTCACAATTCCTATTCTGAACACTTG TTGCAGACGTAGTCGTCCTAACCTGAATCGGAGGCATGCCAGCAGAACAACCTTTCATTATCATTGGCCA AGTAGCCTCTGTACTCTACTTCTCCTTGTTCCTAGTCCTATTCCCCCTTGCAGGATGGGCAGAAAACAAA GTCCTTGGATGAACCTGCATCAGTAGCTCAGCGTTTAGAGCATCGGTCTTGTAAGCCGGTGGCGGAGGTT AAAGTCCTCCCTTTTGCTCAAAGGAGAAGGAATTTAACCTCCACCCCTAACTCCCAAAGCTAGGATTCTA CTTAAACTATCCTCTGATGTACATGCAGACAAGTTTGTCTTTCATATACATGTATGTACTTACACCATAT ATATGTATCTAGGGCATATACATTAATACACTCAAGGGCATATATATATTTATAATAAAGGTATTGTACT ACACCATACATATATCAACATTTACACTATGTACTAGACATAAACCATAGTAATAGGCAGTACATAACCT GCTTTCTAGGACTGGCGAAATAGAATAACCCCACATAACAACTCATAGGCAAACCTATACCAAGTACGGA CATCCTATAATATTAAACAGAATTGCGCAGTAAGAGCCTACCAACAAGCTCATTACTTAATGTTAACGGT TATTGAGGATGAGGGACAAGAATTGTGGGGTTTTCACCCGGTGAACTATTACTGGCATTTGGTTCCGAAC TCAGAGGCATAACTTGATATTACCCCCCATTTCAATTCTTGACAGATTGCATAGATTGTTGGTGGAGTAC ATATTACCCTTTAAGCCACATGCCGAGCACTCTCTCCACAGGGGTCAGGTTATTTTTTTTTTTTTTTTCC TTTTCACTTGGCATTTGAGAGTGCATACAAATAGAAGTTGACAAGGTCGTACATTTTCCTCGCATAAGTA AATAGTATGAATGGTGAAAAGATTTGTTAAGAGACTTTACATAAAAGACTTTCATGGACATAACCGTAAA ATCAACCGTAAAATCCTTAAGGATTACCCCCTTCTTTTTTTTCCGTCAAACCCCCCCACCCCCCTTAAAC TCCTAAGATCACTAACACTCCTGCAAACCCCCCGGGAAACAGGAAAATCTGGAGTGGGGCACTTTACGCT TTAAAACCCAAATATATATATTATTGAAATATTTCACAAA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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