Viewing data for Acomys cahirinus
| Scientific name | Acomys cahirinus |
| Common name | Spiny mouse |
| Maximum lifespan | 5.90 years (Acomys cahirinus@AnAge) |
| Total mtDNA (size: 16217 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6585 | 9632 | 4511 | 2074 | 4216 | 5416 |
| Base content per 1 kb (bases) | 406 | 594 | 278 | 128 | 260 | 334 |
| Base content (%) | 40.6% | 59.4% | ||||
| Total protein-coding genes (size: 11329 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4723 | 6606 | 3411 | 1312 | 2975 | 3631 |
| Base content per 1 kb (bases) | 417 | 583 | 301 | 116 | 263 | 321 |
| Base content (%) | 41.7% | 58.3% | ||||
| D-loop (size: 838 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 314 | 524 | 214 | 100 | 263 | 261 |
| Base content per 1 kb (bases) | 375 | 625 | 255 | 119 | 314 | 311 |
| Base content (%) | 37.5% | 62.5% | ||||
| Total tRNA-coding genes (size: 1492 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 557 | 935 | 332 | 225 | 394 | 541 |
| Base content per 1 kb (bases) | 373 | 627 | 223 | 151 | 264 | 363 |
| Base content (%) | 37.3% | 62.7% | ||||
| Total rRNA-coding genes (size: 2505 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 969 | 1536 | 540 | 429 | 572 | 964 |
| Base content per 1 kb (bases) | 387 | 613 | 216 | 171 | 228 | 385 |
| Base content (%) | 38.7% | 61.3% | ||||
| 12S rRNA gene (size: 946 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 364 | 582 | 203 | 161 | 218 | 364 |
| Base content per 1 kb (bases) | 385 | 615 | 215 | 170 | 230 | 385 |
| Base content (%) | 38.5% | 61.5% | ||||
| 16S rRNA gene (size: 1559 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 605 | 954 | 337 | 268 | 354 | 600 |
| Base content per 1 kb (bases) | 388 | 612 | 216 | 172 | 227 | 385 |
| Base content (%) | 38.8% | 61.2% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 278 | 403 | 209 | 69 | 192 | 211 |
| Base content per 1 kb (bases) | 408 | 592 | 307 | 101 | 282 | 310 |
| Base content (%) | 40.8% | 59.2% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 74 | 130 | 63 | 11 | 52 | 78 |
| Base content per 1 kb (bases) | 363 | 637 | 309 | 54 | 255 | 382 |
| Base content (%) | 36.3% | 63.7% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 682 | 863 | 421 | 261 | 445 | 418 |
| Base content per 1 kb (bases) | 441 | 559 | 272 | 169 | 288 | 271 |
| Base content (%) | 44.1% | 55.9% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 284 | 400 | 188 | 96 | 176 | 224 |
| Base content per 1 kb (bases) | 415 | 585 | 275 | 140 | 257 | 327 |
| Base content (%) | 41.5% | 58.5% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 346 | 438 | 234 | 112 | 204 | 234 |
| Base content per 1 kb (bases) | 441 | 559 | 298 | 143 | 260 | 298 |
| Base content (%) | 44.1% | 55.9% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 478 | 663 | 332 | 146 | 315 | 348 |
| Base content per 1 kb (bases) | 419 | 581 | 291 | 128 | 276 | 305 |
| Base content (%) | 41.9% | 58.1% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 410 | 545 | 303 | 107 | 258 | 287 |
| Base content per 1 kb (bases) | 429 | 571 | 317 | 112 | 270 | 301 |
| Base content (%) | 42.9% | 57.1% | ||||
| ND2 (size: 1037 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 426 | 611 | 344 | 82 | 242 | 369 |
| Base content per 1 kb (bases) | 411 | 589 | 332 | 79 | 233 | 356 |
| Base content (%) | 41.1% | 58.9% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 144 | 204 | 106 | 38 | 98 | 106 |
| Base content per 1 kb (bases) | 414 | 586 | 305 | 109 | 282 | 305 |
| Base content (%) | 41.4% | 58.6% | ||||
| ND4 (size: 1372 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 537 | 835 | 405 | 132 | 351 | 484 |
| Base content per 1 kb (bases) | 391 | 609 | 295 | 96 | 256 | 353 |
| Base content (%) | 39.1% | 60.9% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 125 | 172 | 93 | 32 | 86 | 86 |
| Base content per 1 kb (bases) | 421 | 579 | 313 | 108 | 290 | 290 |
| Base content (%) | 42.1% | 57.9% | ||||
| ND5 (size: 1833 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 757 | 1076 | 564 | 193 | 477 | 599 |
| Base content per 1 kb (bases) | 413 | 587 | 308 | 105 | 260 | 327 |
| Base content (%) | 41.3% | 58.7% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 209 | 316 | 169 | 40 | 102 | 214 |
| Base content per 1 kb (bases) | 398 | 602 | 322 | 76 | 194 | 408 |
| Base content (%) | 39.8% | 60.2% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 13 (5.75%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 21 (9.29%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 9 (3.98%) 
Leucine (Leu, L)
n = 43 (19.03%) 
Isoleucine (Ile, I)
n = 30 (13.27%) 
Methionine (Met, M)
n = 15 (6.64%) 
Proline (Pro, P)
n = 14 (6.19%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 2 (0.88%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 9 (3.98%) 
Glutamine (Gln, Q)
n = 7 (3.1%) 
Histidine (His, H)
n = 7 (3.1%) 
Lysine (Lys, K)
n = 6 (2.65%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 10 | 12 | 3 | 11 | 25 | 0 | 3 | 7 | 0 | 1 | 1 | 6 | 1 | 6 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 4 | 6 | 3 | 0 | 2 | 3 | 5 | 0 | 3 | 8 | 2 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 8 | 1 | 2 | 2 | 5 | 0 | 0 | 5 | 2 | 0 | 1 | 1 | 2 | 7 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 3 | 0 | 1 | 1 | 5 | 1 | 0 | 4 | 1 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 37 | 72 | 86 | 32 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 57 | 37 | 110 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 80 | 88 | 50 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITALSSTATLFILLQLKLSNIYYFNAPTPKTLKSLKTENPWEMKWTKIYSPHSLPPH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (4.48%)
Serine (Ser, S)
n = 7 (10.45%)
Threonine (Thr, T)
n = 9 (13.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 10 (14.93%)
Isoleucine (Ile, I)
n = 4 (5.97%)
Methionine (Met, M)
n = 2 (2.99%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 3 (4.48%)
Tyrosine (Tyr, Y)
n = 3 (4.48%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 3 (4.48%)
Glutamine (Gln, Q)
n = 2 (2.99%)
Histidine (His, H)
n = 2 (2.99%)
Lysine (Lys, K)
n = 6 (8.96%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 3 | 1 | 1 | 1 | 6 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 4 | 1 | 1 | 2 | 4 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 2 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 6 | 19 | 24 | 19 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 26 | 20 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 18 | 34 | 14 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 43 (8.37%)
Serine (Ser, S)
n = 32 (6.23%)
Threonine (Thr, T)
n = 33 (6.42%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 57 (11.09%)
Isoleucine (Ile, I)
n = 43 (8.37%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 29 (5.64%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 20 | 22 | 7 | 14 | 20 | 4 | 12 | 6 | 0 | 5 | 8 | 19 | 6 | 20 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 12 | 17 | 14 | 0 | 4 | 9 | 23 | 10 | 7 | 13 | 9 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 10 | 2 | 7 | 8 | 13 | 1 | 2 | 1 | 4 | 16 | 1 | 0 | 6 | 11 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 7 | 2 | 5 | 10 | 9 | 1 | 2 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 151 | 106 | 136 | 122 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 134 | 96 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 35 | 181 | 186 | 113 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 11 (4.85%)
Serine (Ser, S)
n = 22 (9.69%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 30 (13.22%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 13 (5.73%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 11 | 13 | 6 | 6 | 12 | 1 | 5 | 5 | 1 | 3 | 0 | 9 | 1 | 7 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 4 | 4 | 3 | 0 | 0 | 4 | 4 | 1 | 1 | 2 | 11 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 7 | 1 | 5 | 4 | 7 | 1 | 1 | 4 | 1 | 8 | 0 | 0 | 3 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 11 | 2 | 6 | 5 | 5 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 57 | 58 | 66 | 47 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 28 | 58 | 59 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 72 | 99 | 46 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 12 | 10 | 4 | 6 | 14 | 1 | 7 | 6 | 1 | 0 | 4 | 9 | 0 | 5 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 2 | 7 | 6 | 0 | 1 | 8 | 8 | 4 | 1 | 4 | 5 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 15 | 0 | 1 | 7 | 10 | 0 | 0 | 3 | 2 | 8 | 0 | 1 | 1 | 6 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 7 | 0 | 1 | 3 | 3 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 64 | 64 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 64 | 56 | 99 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 106 | 114 | 31 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.6%)
Alanine (Ala, A)
n = 24 (6.33%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 23 (6.07%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 20 (5.28%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 39 (10.29%)
Methionine (Met, M)
n = 17 (4.49%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 27 (7.12%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 11 (2.9%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 24 | 16 | 7 | 10 | 26 | 0 | 14 | 5 | 1 | 1 | 3 | 14 | 2 | 6 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 6 | 7 | 11 | 0 | 2 | 9 | 10 | 4 | 2 | 11 | 8 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 13 | 0 | 5 | 7 | 9 | 0 | 0 | 3 | 7 | 7 | 0 | 2 | 2 | 16 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 6 | 0 | 2 | 8 | 11 | 0 | 0 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 85 | 92 | 111 | 92 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 90 | 78 | 162 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 150 | 159 | 60 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 10 (3.15%)
Alanine (Ala, A)
n = 24 (7.57%)
Serine (Ser, S)
n = 29 (9.15%)
Threonine (Thr, T)
n = 22 (6.94%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 13 (4.1%)
Leucine (Leu, L)
n = 56 (17.67%)
Isoleucine (Ile, I)
n = 26 (8.2%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 23 (7.26%)
Phenylalanine (Phe, F)
n = 18 (5.68%)
Tyrosine (Tyr, Y)
n = 14 (4.42%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 4 (1.26%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 5 (1.58%)
Histidine (His, H)
n = 5 (1.58%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 17 | 18 | 7 | 6 | 35 | 2 | 6 | 5 | 0 | 1 | 2 | 8 | 2 | 8 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 0 | 2 | 15 | 7 | 0 | 2 | 3 | 5 | 0 | 0 | 15 | 7 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 6 | 1 | 6 | 9 | 10 | 0 | 1 | 3 | 4 | 10 | 1 | 0 | 3 | 9 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 9 | 2 | 0 | 4 | 7 | 0 | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 62 | 91 | 92 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 32 | 94 | 58 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 118 | 137 | 50 | ||||||||||||
| ND2 (size: 1037 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 20 (5.81%)
Serine (Ser, S)
n = 30 (8.72%)
Threonine (Thr, T)
n = 36 (10.47%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.33%)
Leucine (Leu, L)
n = 69 (20.06%)
Isoleucine (Ile, I)
n = 35 (10.17%)
Methionine (Met, M)
n = 29 (8.43%)
Proline (Pro, P)
n = 24 (6.98%)
Phenylalanine (Phe, F)
n = 10 (2.91%)
Tyrosine (Tyr, Y)
n = 8 (2.33%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.65%)
Glutamine (Gln, Q)
n = 10 (2.91%)
Histidine (His, H)
n = 8 (2.33%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 19 | 29 | 3 | 17 | 42 | 0 | 7 | 10 | 0 | 1 | 1 | 5 | 1 | 3 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 0 | 0 | 11 | 9 | 0 | 0 | 3 | 8 | 2 | 2 | 14 | 7 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 19 | 0 | 2 | 10 | 11 | 1 | 0 | 6 | 0 | 8 | 0 | 0 | 2 | 14 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 5 | 0 | 0 | 1 | 12 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 107 | 134 | 57 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 104 | 60 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 133 | 174 | 33 | ||||||||||||
| ND3 (size: 1037 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 20 (5.81%)
Serine (Ser, S)
n = 30 (8.72%)
Threonine (Thr, T)
n = 36 (10.47%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.33%)
Leucine (Leu, L)
n = 69 (20.06%)
Isoleucine (Ile, I)
n = 35 (10.17%)
Methionine (Met, M)
n = 29 (8.43%)
Proline (Pro, P)
n = 24 (6.98%)
Phenylalanine (Phe, F)
n = 10 (2.91%)
Tyrosine (Tyr, Y)
n = 8 (2.33%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.65%)
Glutamine (Gln, Q)
n = 10 (2.91%)
Histidine (His, H)
n = 8 (2.33%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 19 | 29 | 3 | 17 | 42 | 0 | 7 | 10 | 0 | 1 | 1 | 5 | 1 | 3 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 0 | 0 | 11 | 9 | 0 | 0 | 3 | 8 | 2 | 2 | 14 | 7 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 19 | 0 | 2 | 10 | 11 | 1 | 0 | 6 | 0 | 8 | 0 | 0 | 2 | 14 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 5 | 0 | 0 | 1 | 12 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 107 | 134 | 57 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 104 | 60 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 133 | 174 | 33 | ||||||||||||
| ND4 (size: 1372 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (3.51%)
Alanine (Ala, A)
n = 25 (5.48%)
Serine (Ser, S)
n = 43 (9.43%)
Threonine (Thr, T)
n = 41 (8.99%)
Cysteine (Cys, C)
n = 4 (0.88%)
Valine (Val, V)
n = 10 (2.19%)
Leucine (Leu, L)
n = 83 (18.2%)
Isoleucine (Ile, I)
n = 53 (11.62%)
Methionine (Met, M)
n = 39 (8.55%)
Proline (Pro, P)
n = 19 (4.17%)
Phenylalanine (Phe, F)
n = 15 (3.29%)
Tyrosine (Tyr, Y)
n = 14 (3.07%)
Tryptophan (Trp, W)
n = 13 (2.85%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 10 (2.19%)
Asparagine (Asn, N)
n = 23 (5.04%)
Glutamine (Gln, Q)
n = 10 (2.19%)
Histidine (His, H)
n = 13 (2.85%)
Lysine (Lys, K)
n = 14 (3.07%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 31 | 37 | 6 | 16 | 49 | 3 | 9 | 10 | 0 | 0 | 4 | 6 | 0 | 5 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 3 | 3 | 10 | 12 | 0 | 0 | 2 | 10 | 4 | 3 | 8 | 7 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 20 | 0 | 3 | 13 | 15 | 1 | 0 | 11 | 5 | 9 | 2 | 0 | 5 | 18 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 10 | 0 | 0 | 3 | 12 | 2 | 0 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 125 | 181 | 87 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 117 | 87 | 200 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 163 | 216 | 63 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 8 (8.16%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 6 (6.12%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 5 | 6 | 2 | 3 | 10 | 1 | 3 | 2 | 0 | 1 | 2 | 2 | 0 | 2 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 3 | 1 | 4 | 0 | 0 | 1 | 3 | 0 | 1 | 2 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 4 | 0 | 1 | 6 | 5 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 2 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 20 | 23 | 28 | 28 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 31 | 16 | 43 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 39 | 42 | 15 | ||||||||||||
| ND5 (size: 1833 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.26%)
Alanine (Ala, A)
n = 36 (5.9%)
Serine (Ser, S)
n = 54 (8.85%)
Threonine (Thr, T)
n = 65 (10.66%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 14 (2.3%)
Leucine (Leu, L)
n = 101 (16.56%)
Isoleucine (Ile, I)
n = 59 (9.67%)
Methionine (Met, M)
n = 35 (5.74%)
Proline (Pro, P)
n = 29 (4.75%)
Phenylalanine (Phe, F)
n = 34 (5.57%)
Tyrosine (Tyr, Y)
n = 17 (2.79%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 9 (1.48%)
Glutamic acid (Glu, E)
n = 12 (1.97%)
Asparagine (Asn, N)
n = 37 (6.07%)
Glutamine (Gln, Q)
n = 15 (2.46%)
Histidine (His, H)
n = 16 (2.62%)
Lysine (Lys, K)
n = 22 (3.61%)
Arginine (Arg, R)
n = 9 (1.48%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 42 | 33 | 8 | 18 | 50 | 8 | 16 | 14 | 1 | 2 | 3 | 7 | 2 | 16 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 6 | 5 | 15 | 16 | 0 | 2 | 7 | 11 | 6 | 6 | 11 | 12 | 0 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 34 | 17 | 2 | 8 | 18 | 16 | 0 | 3 | 9 | 8 | 9 | 1 | 1 | 10 | 27 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 8 | 4 | 3 | 6 | 21 | 1 | 0 | 3 | 5 | 1 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 97 | 153 | 230 | 131 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 67 | 172 | 129 | 243 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 29 | 239 | 240 | 103 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.52%)
Alanine (Ala, A)
n = 9 (5.17%)
Serine (Ser, S)
n = 13 (7.47%)
Threonine (Thr, T)
n = 6 (3.45%)
Cysteine (Cys, C)
n = 4 (2.3%)
Valine (Val, V)
n = 22 (12.64%)
Leucine (Leu, L)
n = 24 (13.79%)
Isoleucine (Ile, I)
n = 12 (6.9%)
Methionine (Met, M)
n = 12 (6.9%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 7 (4.02%)
Tyrosine (Tyr, Y)
n = 12 (6.9%)
Tryptophan (Trp, W)
n = 6 (3.45%)
Aspartic acid (Asp, D)
n = 5 (2.87%)
Glutamic acid (Glu, E)
n = 8 (4.6%)
Asparagine (Asn, N)
n = 2 (1.15%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 1 (0.57%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 2 | 5 | 3 | 0 | 2 | 0 | 8 | 0 | 0 | 8 | 1 | 4 | 9 | 6 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 4 | 0 | 6 | 1 | 2 | 0 | 11 | 1 | 1 | 14 | 2 | 0 | 0 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 4 | 0 | 1 | 0 | 8 | 0 | 11 | 1 | 3 | 11 | 1 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 5 | 5 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 9 | 41 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 46 | 23 | 29 | 77 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 52 | 8 | 32 | 83 | ||||||||||||
| Total protein-coding genes (size: 11406 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 210 (5.53%)
Alanine (Ala, A)
n = 240 (6.32%)
Serine (Ser, S)
n = 307 (8.08%)
Threonine (Thr, T)
n = 309 (8.13%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 169 (4.45%)
Leucine (Leu, L)
n = 605 (15.93%)
Isoleucine (Ile, I)
n = 355 (9.34%)
Methionine (Met, M)
n = 239 (6.29%)
Proline (Pro, P)
n = 204 (5.37%)
Phenylalanine (Phe, F)
n = 214 (5.63%)
Tyrosine (Tyr, Y)
n = 131 (3.45%)
Tryptophan (Trp, W)
n = 105 (2.76%)
Aspartic acid (Asp, D)
n = 68 (1.79%)
Glutamic acid (Glu, E)
n = 94 (2.47%)
Asparagine (Asn, N)
n = 161 (4.24%)
Glutamine (Gln, Q)
n = 78 (2.05%)
Histidine (His, H)
n = 109 (2.87%)
Lysine (Lys, K)
n = 103 (2.71%)
Arginine (Arg, R)
n = 64 (1.68%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 154 | 201 | 208 | 61 | 114 | 300 | 22 | 92 | 74 | 4 | 23 | 31 | 91 | 24 | 90 | 124 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 31 | 8 | 19 | 47 | 101 | 92 | 0 | 24 | 52 | 89 | 45 | 29 | 99 | 69 | 7 | 50 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 121 | 130 | 8 | 45 | 88 | 109 | 4 | 15 | 46 | 49 | 82 | 9 | 16 | 40 | 121 | 20 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 89 | 76 | 18 | 25 | 43 | 96 | 7 | 4 | 20 | 36 | 4 | 0 | 0 | 7 | 1 | 96 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 781 | 952 | 1228 | 839 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 467 | 999 | 752 | 1582 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 200 | 1351 | 1565 | 684 | ||||||||||||
>NC_020758.1 Acomys cahirinus isolate E03 mitochondrion, complete genome GTTAATGTAGCTTACAACAAAAGCAAAGCACTGAAAATGCTTAGACGGGTAGCTAACCCCATAAACATAA TAGGTTTGGTCCTAGCCTTATAATTAGCTGAAAGTAAAATTACACATGCAAGACTCCCCACACCAGTGTC AAATCCCTTAGAACTAGACAGCTAACCTAAGGAGAAGATATCAAGCACATTAATATAGCTCAAGACATCT CGCCAAGCCACACCCCCACGGGAAACAGCAGTGATAAAAATTAAGCAATGAACGAAAGTTTGACTTAGTT ATACTTCCAAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAATTATTTC ACGGCGTAAAAGGTGTTATATCTAAAACAAATAGAATTAAAACCTGACTTATATGTGAAAATTCATTGTC AGACAAAAACACAACCACGAAAGTGATTCTAATAAACCAAACACGAAAGCTAAGACCCAAACTGGGATTA GATACCCCACTATGCTTAGCCCTAAACTTAAATAATTAATAACAAAATTATTTGCCAGAGAACTACTAGC CATAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATATCCACCTAGAGGAGCCTGTTCTATAATCGATA TACCCCGTTACACCTCACCACCCCTTGCTAATCCAGCCTATATACCGCCATCTTCAGCAAACCCTCAAAA GGACACACAGTAAGCAAGAGCACAAACATAAAAAAGTTAGGTCAAGGTGTAGCCCATGAGGTGGGAAGTA ATGGGCTACATTTTCTTAAAAAGAACACACGAAACCCTTTATGAAATTAAAGGATAAAGGAGGATTTAGT AGTAAATTAAGAATAGAGAGCTTAATTGAATAGAGCAATGAAGTGCGCACACACCGCCCGTCACCCTCCT CAAACTAATCTTCAAGTAAAATAAATAAAATTAAACTAATTAGACTACGAGAGGAGACAAGTCGTAACAA GGTAAGCATACTGGAAAGTGTGCTTGGAGTAATCACAGTGTAGCTTAACAAAAGCATCTGGCCTACACCC AGAAGACTCCACTACCAGTGGACACTTTGAACCAAAAACAGCCCTAACAAATAACCAAATAAACAAACTT ACAGAGTAAACCAAAACATTTAACCTAATAAAAGTATTGGCGAAAGAAAATTATCTTAGGAGCTATAGAG ACAGTACCGCAAGGGAAAGATGAAAGAACTAATTTAAAGTGTAAATAAGCAAAGATTAAACCTTGTACCT TTTGCATAATGAACTAACTAGTGTAAACCTAACTAAGAGAACTAAGCTAGAATACCCGAAACCAAACGAG CTACCTAAGAACAACCTTAGGGGTTAACCCGTCTGTGTAGCAAAACAGTGGGAAGATTTTTAGGTAGAGG TGAAATGCCTAACGAGCTTGGTGATAGCTGGTTGCCCAACAAGGAATATAAGTTCCACTTTAAGGTTGCC AAAAGAACACCCAAATCCAAATGCAAACTTAAAACATAACCAAAAGAGGTACAGCTCTTATGGTAAAGGA AACAACCTTTAATAGTGAGTCAAAACCCCAAGGACAGACCATAGTTGGCCTAAAAGCAGCCACCAATTAA GAAAGCGTTCAAGCTCAACACCACTCCTAAACAAATTCCCCAAACAACAATGACCTCCTATTACCTAAAA TTGGGCTAATCTATAAATCAATAGATGAAATAATGTTAGTATGAGTAACAAGAACACCATTCTCCAGGCA TAAACCTATAACAACTCGGATAACCATTGTTAGTTAACATGCACATAAAAACACCCTATAAACCCCACTC ACAATAACATGTTAATCCAACACAGGAATGCCACCAAGGAAAGATTAAAAAAGATAAAAGGAACTCGGCA AACTCGAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTGCAAGTATTAGAGGCACTGCCTGCCC AGTGACTAAAGTTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTA GGGACTAGCATGAAAGGCTAAACGAGGACTCAACTGTCTCTTATCTTTAATCAGTGAAATTGACCTCCCC GTGAAGAGGCGGGGATAAAAAAATAAGACGAGAAGACCCTATGGAGCTTTAATTTATAGCCTAAACACTA AATCAATATAACCTAATGGGACAACACCTAAGTAGGCCTCAGACTATAATTTCGGTTGGGGTGACCTCGG AGAACAAAAAAACCTCCGAAAGTCTTTAACCTAGACTAACAAGTCAAAGTAACTTAACTATCTAATTGAT CCAAAATCTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCTATTTAAGAGTCCATATCG ACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGAAGCTATTAATGGTTCGTT TGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTATTT ACAATTTCTCCCAGTACGAAAGGACAAGAGAAATAAAGCCCCCTTTCCATAAGCGCTTTCAACAAACTAA TGAAAAATCTCAATTTCACAATGTAAAACAATTTAACCAAGACAAGGTCATTTGGGTGGCAGAGCCAGGA AATTGCATAAGATTTAAAATCTTAATTCCAGAGGTTCAAATCCTCTCCCTAATAGTGCCCCTTATTAATA CCCTAACCCTCCTTATCCCCATCTTAATAGCCATAGCCTTTTTAACTCTAGTAGAACGAAAAATACTAGG CTACATGCAACTACGAAAAGGTCCCAACATCGTAGGACCCTACGGCATCCTACAACCATTTGCAGACGCA ATAAAACTTATTATTAAAGAACCCCTACGACCACTCTCAACTTCAGTAGTCCTATTCATTATCGCCCCCA CATTATCTCTTACCCTAGCCCTCAGCCTATGAATCCCCATACCCATACCCCACCCCCTAGCCAACATAAA CCTGAGCACACTATTTATCCTAGCCCTATCAAGCCTCTCAGTGTACTCCATCCTATGATCAGGATGAGCA TCAAACTCCAAATACTCCCTATTTGGAGCCATCCGAGCCGTCGCCCAAACCATCTCTTACGAAGTAACTA TAGCCATTATTCTCCTATCAGTACTTCTAATAAACGGATCCTTTTCCCTGCAAACCCTAATCATTACCCA AGAACACATATGACTAATCATTCCAACGTGACCCCTAGCCATAATGTGATACATCTCAACACTAGCAGAA ACAAATCGGGCCCCCTTCGACCTTACCGAAGGTGAATCTGAACTTGTATCTGGATTCAACGTAGAGTACT CCGCAGGCCCCTTTGCCTTATTCTTCATAGCAGAGTATACTAACATTATCCTAATAAATGCCCTATCATC CATCATATTTATGGCTCCCCTATATTACGCTGACCACCCAGAAACTTTCACCACAAACTTCATACTAAAA ACCCTAATATTAACCTCTCTATTCCTATGGGTTCGAGCCTCCTATCCGCGATTCCGTTACGACCACCTAA TACACCTCCTATGAAAAAACTTCTTACCACTAACACTAGCACTATGTATATGATATGTATCCCTACCAAT CTTTCTATCAAGTATCCCCCCATACTCTTAGAAATATGTCTGATAAAAGAGTTACTTTGATAGAGTAAAT CATAAAGGTTCAAACCCTTTTATTTCTAGGACAACAGGAATTGAACCTGTACTTAAGAACTCAAAATTCT ACGTGCTACCTATACACCCCATCCTAACAAAGTAAGGTCAGCTAAAAAAGCTATCGGGCCCATACCCCGA AAATGTCGGTTTAAACCCCTCCCATACTAATAAACCCCCTAACATTACTAACCGTTTCCCTAACTATCCT AATAGGCCCAATTGTAACAATAATAAGCTCAAACCTCCTACTAATATGAGTGGGGCTAGAAATAAGCCTA CTAGCCATAATCCCCCTACTCACACACAAAAAATCCCCACGATCAACAGAAGCAGCCACAAAATACTTCA TAACACAAGCCACAGCCTCCATAATTATACTACTAGCCATTATTCTCAACCACATTCAACTAGGATCATG AAATATACACCCACAAACAAACAAACTTACTCTAACCATTATATTCATTGCATTAGTAATTAAACTAGGC CTAGCACCCTTCCACACATGACTCCCAGAAGTAACCCAAGGAGTCCCACTAAGCTCGGGCCTCATCCTAC TAACCTGACAAAAAATTGCCCCCTTATCCATCCTATACCAAATCCACGAACTACTAGACCCCCTACTCAC AACTACTATCTCAATTATTTCAGTATTCACAGGAGCATGAGGAGGACTCAATCAAACACAAATACGAAAA ATCATAGCATACTCATCAATCGCCCACATAGGATGAATACTAGCCATCCTACCTTACAACCCGTCCCTAA CCCTCCTAAACCTTACCATTTACATTCTAATAACCATTTCAATATTTCTTATACTAATAACATCCTCATA CACAACAATCAACTCCATCTCCATAGCATGAAACAAACACCCCATCATAATCCCTCTAATAGCCACCGTA CTCTTATCCCTAGGAGGACTCCCCCCCCTCTCAGGGTTTATACCCAAATGACTCATCATTACAGAACTAC TAAAAAACAACAGCACCCCAGCAGCCAGCCTAATCGCCCTCATAGCACTCCTAAACCTATTCTTCTACAC ACGCCTAATCTACTCTACCTCCCTCACCATCTTCCCCACCAACAACAACTCAAAATTAATCCCCCAACAA CTAGCATCTAAACACTTTCCCATAATACCACTACTAATAACCCTAAGCACAATAATTCTCCCCTTAACAC CCCTACTCATCTTATAAGAAGTTTAGGATATTCAGTCCAAGAGCCTTCAAAGCTCTAAGAAAACACCAAG TTTAACTTCTGAACTAAGGACTGTAGGACTACTCCCTACATCAAATGAACGCAAATCATTCACTTTAATT AAGCTAAATCCTCAACTAGGTTGGCAGGACTATAACCTACAAAATTTTAGTTAACAGCTAAATACCCTAA TACTGGCTTCAACCTACTTCTCCCGCCTAAAAAAGAACAGGCGGGAGAAGCCTCAGTAGGGAAATCTCCT ACTCCTCCGAATTTGCAATTCGACATGAACACTCACCCTAAGGCTTGGTAAGAAGAGGGCTTAACCTCTG TCTTTAGATTTACAGTCTAATACCTGCTCGGCCACCTTACCTATGTTCATCAATCGTTGACTTTTTTCAA CTAACCACAAAGACATCGGAACCCTATACCTTATCTTCGGAGCCTGAGCTGGCATAGTGGGAACAGCCCT TAGTATTCTCATCCGAGCCGAACTGGGACAACCAGGGGCTCTATTAGGTGACGATCAAATCTACAACGTA ATCGTAACCGCCCATGCATTCGTTATAATTTTCTTTATAGTCATACCCATAATAATTGGGGGCTTTGGAA ACTGATTAGTACCCCTAATAATTGGTGCACCAGACATAGCCTTCCCCCGAATAAATAACATAAGTTTCTG GCTTCTTCCTCCCTCCTTCCTCCTCCTAATGGCATCATCAATAGTTGAGGCCGGAGCAGGAACCGGATGA ACCGTATACCCACCCCTAGCAGGGAACCTAGCACATGCCGGAGCATCTGTAGACTTAGCTATTTTCTCTC TTCACTTAGCAGGAGTGTCATCCATTCTCGGGGCAATCAACTTTATCACCACTATTATTAATATAAAACC CCCAGCCATTACACAATACCAAACCCCTCTATTCGTCTGATCAGTCCTAATTACTGCTGTTCTCCTACTC CTCTCTCTACCCGTATTAGCAGCAGGAATTACCATATTATTAACCGACCGCAACCTAAACACAACCTTTT TCGACCCAGCTGGAGGAGGAGACCCTATCCTCTACCAACACTTATTCTGATTTTTCGGACACCCTGAAGT GTATATCCTGATTCTCCCTGGGTTTGGGATTATCTCACACATTGTTACATACTACTCAGGAAAAAAAGAA CCCTTCGGCTATATGGGGATAGTCTGAGCCATGATATCCATTGGATTCCTAGGCTTTATCGTATGAGCCC ACCACATGTTTACAGTGGGCTTAGACGTAGATACCCGAGCCTACTTCACATCAGCAACTATAATTATTGC TATTCCAACGGGAGTTAAAGTCTTTAGCTGATTAGCCACGCTCCACGGAGGGAATATTAAGTGATCCCCA GCCATACTATGAGCCCTTGGATTTATCTTCCTATTTACTGTAGGTGGTCTAACCGGAATTGTACTGTCAA ACTCCTCACTAGATATTGTACTCCACGACACATACTACGTGGTAGCCCACTTCCACTACGTATTATCTAT GGGGGCTGTATTTGCTATCATAGCAGGGTTCGTCCACTGATTTCCCCTATTCTCGGGCTACTCTCTCAAT GATATGTGAGCAAAAGCTCACTTTATCGTAATATTTGTAGGAGTAAATTTAACTTTTTTTCCCCAACACT TCCTAGGCCTATCCGGCATACCTCGACGATACTCTGACTACCCAGATGCTTACACAACTTGAAACATGGT GTCCTCCATAGGCTCATTTATTTCTCTCACAGCTGTCATTATCATAATCTTTATCATCTGAGAAGCTTTC GCCTCAAAACGTGAAATCCTGTCAGTCCCCTACACAGCCACCAACCTAGAGTGACTCCACGGATGCCCTC CACCCTATCACACCTTCGAAGAACCCACCTATGTAAAAGTAAAATAAGAAAGGAAGGATTCGAACCCCCT AAAATTGGTTTCAAGCCAACCCCATAACCTCTATGTCTTTCTTTATAAGATATTAGTAAACACATTACAT AACTTTGTCAAGGTTAAATCACAGACTCAACCCTGTATATCTTATATGGCTTACCCATTTCAACTAGGAC TTCAAGATGCCACATCCCCAATCATAGAAGAGCTCACGAGCTTTCACGATCACACCCTAATAATTGTGTT TCTCATTAGCTCTTTAGTACTATATATTATCTCATCCATACTATCCACAAAAATAACCCACACAAGCACC ATAGATGCTCAGGGGGTAGAAACCATCTGAACCATCTTACCAGCCGCAATTCTAGTTCTTATTGCACTCC CATCTCTCCGGATCCTTTACATAATAGACGAAATCAACAACCCAGTACTAACCGTTAAAACAATGGGCCA CCAATGATACTGAAGTTACGAATACACCGATTACGAAGACCTCTGCTTTGACTCCTACATAACCCCAACA TCTGACTTAAAACCAGGAGAACTGCGCCTACTAGAAGTAGATAACCGAGTAGTACTCCCCATAGAGCTTC CTATTCGCATACTAATCTCATCTGAAGACGTACTACACGCATGAGCCGTTCCATCACTAGGCCTAAAAAC AGATGCTATCCCAGGACGCTTAAACCAAGCCACAATCTCATCAAATCGCCCAGGCTTATTTTACGGACAA TGCTCAGAAATCTGTGGCTCAAATCATAGCTTTATACCCATCGTACTTGAAATAGTACCACTTAAACACT TTGAAAATTGATCGGCTTCTATAATTTAACCTCACTGCGAAGCTAAGAGCATTAACCTTTTAAGTTAAAA CTAGAGACAAAAGTCTCCACAGTGATATGCCCCAACTAGATACATCAACATGATTTATCACCGCCCTATC CTCAACCGCAACACTTTTTATTCTATTACAACTAAAACTCTCCAATATCTACTATTTCAATGCACCCACA CCCAAAACTCTAAAATCACTAAAAACTGAAAACCCCTGAGAAATAAAATGAACGAAAATCTATTCTCCTC ATTCATTACCCCCACACTAATAGGCCTACCTGTAGTCATTATTATTATCACACTCCCCTTCATCATGTTC CCTAACTCAAAACGCCTCTTTAACAACCGCCTAATTTCTCTTCAACAATGACTAATTAAACTAATTATAA AACAAATAATACTAATCCACACACCAAAGGGTCGAACCTGGTCACTAATAATCATTTCCCTAATTATATT TATTGGATCAACTAACCTACTAGGCCTCCTCCCCCACACATTCACGCCTACCACCCAACTATCTATAAAT CTCAGCATAGCTATCCCCTTGTGAGCTGGAGCTGTGATCATAGGATTCCGCCATAAACTAAAAGACTCAC TAGCCCACTTTCTCCCCCAAGGTACCCCCATTACCCTTATTCCCATACTTATCATCATCGAAACAATTAG CCTATTTATCCAACCCATGGCCCTAGCAGTTCGCCTCACAGCCAACATTACCGCAGGCCACCTACTCATA CACTTAATTGGAGGAGCCACACTAGTACTCATAAGCATTAGCCCGCCAACCGCCCTAATTACATTCATTA TTCTCCTACTCCTAACCGTATTAGAATTTGCTGTAGCACTAATTCAAGCCTATGTATTTACTCTACTAGT AAGCTTATATCTACATGATAACACCTAATGAACCACCAAACTCATGCATTCCACATAGTCAACCCCAGCC CATGACCACTAACAGGGGCCCTCTCAGCACTTCTCCTTACATCCGGCTTAATTATATGATTTCACTATAA CTCCACAATTCTACTAACAACAGGCTTACTTACAAACCTCCTAACAATATACCAGTGATGACGGGACGTA ATTCGTGAAGGAACCTTCCAAGGCCACCATACCCCCATCGTACAAAAAGGCTTACGCTACGGAATAATCT TATTCATTGTATCAGAAATCTTTTTCTTCGCCGGATTCTTCTGAGCCTTCTACCACTCAAGCCTAGTCCC AACACATGACTTAGGGGGATTCTGACCACCTGCAGGAATCTCACCCCTAAACCCCTTAGAAGTACCACTC CTAAATACATCCGTCCTATTGGCTTCAGGTGTCTCAATCACATGAGCCCACCATAGCCTCATAGAAGGAA AGCGAATACACATAAACCAAGCCCTGTCCATTACCATCGCCCTAGGGCTCTACTTCACTATCCTACAAGC TTCCGAATACTTCGAAACATCCTTCTCCATCTCTGATGGCATCTATGGCTCAACATTCTTCATAGCAACA GGGTTTCACGGACTACACGTAATCATTGGAACAACCTTCCTAATAATCTGCCTTCTACGACAAATAAAAT TCCACTTCACATCAAAACACCACTTTGGCTTCGAAGCCGCAGCATGATACTGACACTTTGTAGACGTAGT ATGACTATTCTTATACGTATCAATCTACTGATGAGGCTCATACTTTCTTAGTATAATAAGTACAACTGAC TTCCAATCAGTTAGATCTAGATTAAACTAGAAGAGAGTAATCAACATACTCCTGGCCGTCACTATCAACA TCACCCTGTCACTTCTCCTAATTACAGTAGCCTTCTGAATACCCCAAACTAACATTTACACAGAGAAAGC AAACCCCTATGAATGTGGCTTTGATCCCATTAATTCAGCCCGCCTTCCCTTCTCCATAAAATTTTTCCTT GTAGCCATTACATTTCTCCTATTCGACCTAGAAATTGCACTACTCCTACCGATCCCCTGAGCCATCCAAA CACCCAAAGTCCATTACATAATACTATATGCATTTCTCCTTATTTCAATTCTCTCCCTAGGACTAGCCTA CGAATGAATACACAAAGGCCTAGAGTGAACAGAATAATTGGTAATTAGTTTAAATAAAATAAATGATTTC GACTCATTAGACTATGGCCCCCACCATAATTACCAAATGTCCCCTATCTATATCAACCTCACCCTAGCTT TCTCCCTGTCACTCCTAGGCACCTTAATATTTCGCTCACACCTCATATCCTCACTTCTATGCCTAGAGGG AATAATATTATCCCTATTCATCATAACATCCGCATCTTCCCTAAACACTAACTCAATAACCTTCTTCCCC ATCCCCATCACAATTCTAGTCTTTGCAGCATGCGAAGCAGCTGTTGGATTAGCTCTACTAGTAAAAGTCT CAAGCACATACGGAACAGACTACGTACAAAATCTTAATGCCCTACAATGCTAAAAATTATCATAGCCTCA ACCATACTTCTCCCCCTAACTTGACTATCAAAAAACAAGTATATATGAATCAACGTAACATCCCATAGCT TCATAATCAGCCTAACAAGCCTAACCCTACTATGACAAAACGAAAACTGCACAACCTTCTCCATCTCCCT ATTCTCTGACCACATTTCCACACCTCTGATCATTCTAACAACCTGACTCCTACCTCTAATACTCCTAGCC AGCCAAAACCATATAAAAAAGGAAAACCCCACCCACAAAAAATTATATATCACCATACTAATTCTACTAC AAATCCTCCTAATCCTAACATTTTCCGCAACAGAAATAATTATATTTTACATTATATTCGAAGCCACTTT AATCCCCACACTTATTATTATCACACGATGGGGCAATCAAACAGAACGATTAAACGCAGGACTATACTTC CTATTCTATACCCTAGTAGGGTCAATTCCACTCCTCATTGCCCTTATCATAACCCAAAACTCAACAGGAA CTTTAAACTTCATACTTATAACCCTCAATAGCCAAACAATAAACACAACATGATCAAACAACATCCTATG ACTAACATGCATACTAGCATTTCTAATCAAAATACCACTATACGGAGTCCACTTATGACTACCCAAAGCA CATGTAGAAGCTCCAATCGCAGGATCCATAGTCCTAGCAGCCATCCTACTAAAACTAGGAGGGTATGGCA TAATACGAATCTCTATCATACTGGACCCAATAACTAAATCCATATCCTACCCATTTATCATCCTATCACT CTGAGGAATAATTATAACAAGCTCCATTTGCCTACGACAAACAGACCTAAAATCCCTAATCGCTTACTCC TCAGTCAGCCACATAGCACTAGTAATTGCATCAATTATAATTCAAACCCCATGAAGCTTCATAGGAGCCA TAGCCCTAATAATCGCCCACGGACTAACTTCATCACTTATATTCTGTCTAGCAAATTCAAATTACGAACG AACCCACAGCCGAACAATAATCTTAGCCCGCAGCCTTCAAACAATCTTTCCCCTAATAGCAATCTGGTGA GTCCTAGCAAGCCTAGCAAACCTCGCTCTACCCCCCTCAATTAACCTCATCGGAGAACTACTAATCACCA TATCGCTATTCTCTTGATCCAACCCATCAATCATTCTCTTAGGGGTAAACATTATTATCACAGCCCTGTA CTCACTATACATGATCATCATAACCCAACGAGGAAAACTAAACTATCATATTAATAACCTCCACCCTTCA CACACCCGAGAACTCACCCTCATATCCCTCCACATTATACCGCTAATCTTACTCACTGTAAAACCCGAAC TAATTTTAGGGTACATATGTAGGTATAGTTTAAAAAAAACCTTAGATTGTGAATCTAACAATAGAAGACT AAAACCCTCTTGCTTACCAAGAAAGAATACAAGAACTGCTAATTCATGTAACCATACCTAAACATATGGC TTTCTTACTTTTATAGGATAACAGTAATCCATTGGTCTTAGGAACCAAAAACTTGGTGCAACTCCAAATA AAAGTAATAAACCTTATTACACCCCTAACCCTCCTAACCTTATTAACACTACTCCTACCAACCCTGCTAT CATTAACACATCTAATAAAACACACCAAATTTCCCCATTACGCAACCCTATCCATTAAAAACGCCTTTCT GATCAGCCTAGTACCACTAGCAACCCTACTTCACTATAATATTGAATCAATAATCTCTAGCTGACACTGA ATAACCATCAATACCATTAACCTGTCCATTAGCTTTAAAATCGATTTTTTCTCCATTTTATTCCTATCAG TGGCCCTATTTGTAACTTGATCTATCATAGAGTTTTCTTCTTGATACATACACTCAGACCCCGACTTAAA TCGCTTTATTAAGTACCTCCTACTGTTTCTAATCACAATAATCATTCTGACTTCCGCCAACAACCTATTT CAACTGTTCATCGGCTGAGAGGGTGTAGGAATCATATCATTTCTTCTCATCGGTTGATGATATGGCCGAA CTGAAGCAAATACTGCAGCACTACAAGCCATCCTATATAACCGCATTGGGGATATTGGGTTAATCCTAGC CATAACATGATTCTGCCTAAACTATAACTCATGGGAAATGCAACAAATCCTTATACACAACAACAACAAC ACTATCCCCCTAATAGGGCTCCTACTAGCAGCAACTGGAAAATCCGCTCAATTTGGACTCCACCCATGAC TCCCCTCAGCCATAGAAGGACCCACCCCCGTATCAGCCCTACTCCACTCAAGCACAATAGTTGTAGCAGG GGTTTTCTTAATAATCCGATTCTTCCCACTTACCTCAAACAATAGCACCATCTTAACCCTCATACTATGC CTAGGGTCCATCACCACCTTGTTCACAGCAATCTGCGCACTTACCCAAAACGACATCAAAAAAATCGTAG CATTCTCCACATCCAGCCAGCTAGGACTAATAATAGTCACCTTAGGCATCAACCAACCCTACCTAGCTTT TCTTCACATCTGCATGCATGCCTTCTTCAAAGCTATACTATTCATATGCTCCGGGTCCATCATTCACAAC CTAAATGATGAACAAGACATCCGAAAAATAGGAAGTACAACCCAAACTCTCCCATTCACCACCTCCTGCC TAACTATCGGAAGCCTAGCCTTAACGGGCATACCATTCCTCACCGGATTTTACTCCAAAGACCTAATCAT CGAAGCAGTCAATACGTCTAATACCAACGCCTGAGCCCTACTAATCACACTAATCGCAACCTCCCTAACT GCTGCTTACAGCATACGAATTATCTATTTTGTCACAATAACAAAACCACGGTACCCACCTATAATATCAA TAAGCGAAAACAACCCCAAACTAATTAACCCAATTAAACGCCTAGCATTAGGCAGTATTTTCGCAGGATA TATCATCTCCCACAACATCCCACCAATCAACACCCAAACCATAACCATACCCTGACAACTAAAAATAACA GCCCTATTTATCACAATCACAGGACTCCTGGTGGCCCTAGAACTAAACAACCTCACCTCAAACCTAACCC CCAACAAAACTTCCCCTTATTCCACATTCTCAGCCCTTCTAGGATACTTTCCTACCATCACCCACCGATT AATTCCTGCAAAAACACTCAACCTGGGCATAAAAATTTCCTTAAATACCCTAGACCAAACCTGATTAGAG ACTGCCATCCCTAAATCTACCTCAACCCTCCACACTATAATATCTAAACACATCTCCAATCAAAAAGGCC TAATCAAAATCTACTTCCTCTCATTCCTAGTATCAATAACCCTCATCCCACTACTATTATTACCTAGTTA TCTCGAGTGATCTCAATAATAATAAATACCCCAATAAATAGTGATCACCCAGCCACAATTATCAATCAAC TGGCACAACTATATATAGCAGCCACACCAACCCCCCCTTCCCCTATAACCCCTAAATCATCTGTCTCATA AACAGCTCAACTATCCATCCCATAGACCTCTACCCCCAAACCAAGATCACCATAATAACTAATAACATAT ATTAAGATCACCTCTACAACAAGACCCCAAACCAACACACCCACACTCAACCAACTAGAGCCCCAAGTTT CCGGATATTCCTCCATAGCCATAGCTGTAGTATAACCAAACACAACCATTATACCTCCCAAATAAATTAG AAACACCATTAAACCTAAAAAAGACCCCCCAAGACCCAACACCAAGAAACAACCTACACACCCACTCAAA ATTAAAACCAACCCCCCATAAATAGGAGAAGGCTTCAATGCTAACCCCAAACAACCTGCTAAAAAAATAG AACTTAACACGTACATATAATTAGTCATTATTCCTACATAGCACTTAACTATGGCTAATGACATGAAAAA TCATCGTTGTAACTCAACTATAAGAACACTAATGAAAATCATACGAAAAACACACCCACTCCTAAAAATC ATCAACCATGCATTCGTCGACCTCCCTGCACCCTCTAACATTTCATCATGATGAAACTTCGGCTCTCTAT TAGGAGTATGCCTAGTAATACAAATCCTCACAGGCCTATTCTTAGCAATACACTACACCTCAGATACCAT AACAGCATTCTCATCCGTAACCCACATCTGCCGAGACGTAAACTACGGCTGATTAATTCGATATCTCCAT GCAAACGGAGCCTCCATATTCTTCGTATGCTTGTTCATACACGTAGGACGAGGCATTTATTATGGATCTT ACACCTTTACAGAAACATGAAACCTCGGCGTTATTCTATTGTTCGCCGTAATAGCAACTGCATTTATAGG ATATGTCCTTCCATGAGGACAAATATCCTTCTGAGGGGCTACAGTCATTACAAACCTACTATCAGCTATT CCCTATATCGGCACTAACCTAGTAGAATGAATTTGAGGTGGGTTTTCAGTAGACAAAGCCACCCTTACAC GCTTCTTCGCATTCCACTTTATCCTCCCCTTTATCATTGCAGCCCTAGCCATAGTACACCTTCTATTCCT TCACGAAACTGGCTCCAATAATCCCACAGGGGTGAACTCTGATGCAGACAAAATCCCATTCCACCCCTAC TACACAATTAAAGACCTTTTAGGTGTATTCCTAATACTATTAATTCTCCTCTTATTAGTATTATTCTCCC CAGACCTATTAGGAGACCCAGACAACTATACACCGGCTAACCCCCTAAACACCCCTCCCCACATCAAACC AGAATGATACTTCCTATTCGCATACGCTATCCTACGCTCTATCCCCAACAAACTTGGAGGCGTGCTAGCC CTAGTATTATCCATCCTAATCCTAATTCTTATACCCCTCATCCACACATCAAAACAACGAAGCTTAATAT TCCGCCCAATTAGCCAGGCCATATTCTGAATCCTAACAGCTAACCTACTCATCCTAACCTGAATCGGAGG GCAACCCGTAGAACACCCCTTTATCATCATCGGCCAACTAGCTTCAATCAGCTATTTCTCCATCATTTTA ATTTTAATACCAATCTCAGGACTAATTGAAAACAAAATACTAAAATTAAACTGCCCCAATAGTATAACAA ATTACACTGGTCTTGTAAGCCAAAAACGGAGAATAAATCTCCTTGGGACATCAAGAGAGAAGACCCTATC TTCACCGCCAACCCCCAAAGCTGGCATTCTAATTAAACTACCTCTTGAATTTTTTATGTACATAAAATTA TCTACCACCCACAACATTATATGTATATATTACATTAAATTATTTACCCCTAGCATATAAGCACGTAATT CACATTAATGTATTAAGACCCAAATGATTGATTTAACTATAATTAACCACCTCATGGATATTCATCATAA CATATATATTAATGTTCAATTAAACATATCTGTGTTATCAGACATACACCATTAAGTCATAACCCTGCTT GTCCATATGACTATCCCCTTCCAATGTTGGTCTATCTATCTACCATCCTCCGTGAAATCATCAACCCGCC CACCCCTGCCACTCTTCTCGCTCCGGGCCCATTAAACTTGGGGGTAGCTAATGTGAAACTTTAACAGACA TCTGGTTCTTTCTTCAGGGCCATATAAATGGATCATCGCCCATACGTTCCCCTTAAATAAGACATCACGA TGGTTCGGGTCTAATCAGCCCAGGACCAACATAACTGTAGTCTCGTGCCTTTGGTATTTTTTAATTTTAG GATGCTTTCCTCAACAAAGCCGTCAAGGCATGTAATTCAGCCCAAAGTCCGATGGGACATACTATTCAAG AATTATTTACCCCCATTTACAACTTCCTCTCCCCATTCGTTTAATGGTTTCAGGACATATAAAGAGATAT TGGATACTTTCAACACATCAAACCCCCCTACCCCCCTTTGCCAAACCCCAAAAACAAAGGTTTCTATCCA TTCGAAGGGTGCACAAAACTTAACTTGTTTTTTAGTATTAAAAAATTTAACCCCCCAATATCTTACCCCT CATTTTCAACTCTATCGTACAAAAATCTTAGAATTCTAACCACACAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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