Viewing data for Sander canadensis


Scientific name Sander canadensis
Common name Sauger
Maximum lifespan 18.00 years (Sander canadensis@AnAge)

Total mtDNA (size: 16542 bases) GC AT G C A T
Base content (bases) 7436 9106 4625 2811 4585 4521
Base content per 1 kb (bases) 450 550 280 170 277 273
Base content (%) 45.0% 55.0%
Total protein-coding genes (size: 11413 bases) GC AT G C A T
Base content (bases) 5137 6276 3348 1789 3366 2910
Base content per 1 kb (bases) 450 550 293 157 295 255
Base content (%) 45.0% 55.0%
D-loop (size: 892 bases) GC AT G C A T
Base content (bases) 329 563 186 143 283 280
Base content per 1 kb (bases) 369 631 209 160 317 314
Base content (%) 36.9% 63.1%
Total tRNA-coding genes (size: 1546 bases) GC AT G C A T
Base content (bases) 702 844 392 310 362 482
Base content per 1 kb (bases) 454 546 254 201 234 312
Base content (%) 45.4% 54.6%
Total rRNA-coding genes (size: 2634 bases) GC AT G C A T
Base content (bases) 1236 1398 680 556 560 838
Base content per 1 kb (bases) 469 531 258 211 213 318
Base content (%) 46.9% 53.1%
12S rRNA gene (size: 946 bases) GC AT G C A T
Base content (bases) 456 490 248 208 197 293
Base content per 1 kb (bases) 482 518 262 220 208 310
Base content (%) 48.2% 51.8%
16S rRNA gene (size: 1688 bases) GC AT G C A T
Base content (bases) 780 908 432 348 363 545
Base content per 1 kb (bases) 462 538 256 206 215 323
Base content (%) 46.2% 53.8%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 312 369 221 91 210 159
Base content per 1 kb (bases) 458 542 325 134 308 233
Base content (%) 45.8% 54.2%
ATP8 (size: 164 bases) GC AT G C A T
Base content (bases) 75 89 54 21 42 47
Base content per 1 kb (bases) 457 543 329 128 256 287
Base content (%) 45.7% 54.3%
COX1 (size: 1560 bases) GC AT G C A T
Base content (bases) 701 859 410 291 490 369
Base content per 1 kb (bases) 449 551 263 187 314 237
Base content (%) 44.9% 55.1%
COX2 (size: 691 bases) GC AT G C A T
Base content (bases) 297 394 180 117 207 187
Base content per 1 kb (bases) 430 570 260 169 300 271
Base content (%) 43.0% 57.0%
COX3 (size: 785 bases) GC AT G C A T
Base content (bases) 374 411 229 145 234 177
Base content per 1 kb (bases) 476 524 292 185 298 225
Base content (%) 47.6% 52.4%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 527 614 345 182 349 265
Base content per 1 kb (bases) 462 538 302 160 306 232
Base content (%) 46.2% 53.8%
ND1 (size: 975 bases) GC AT G C A T
Base content (bases) 439 536 284 155 305 231
Base content per 1 kb (bases) 450 550 291 159 313 237
Base content (%) 45.0% 55.0%
ND2 (size: 1046 bases) GC AT G C A T
Base content (bases) 468 578 336 132 302 276
Base content per 1 kb (bases) 447 553 321 126 289 264
Base content (%) 44.7% 55.3%
ND3 (size: 351 bases) GC AT G C A T
Base content (bases) 158 193 104 54 112 81
Base content per 1 kb (bases) 450 550 296 154 319 231
Base content (%) 45.0% 55.0%
ND4 (size: 1381 bases) GC AT G C A T
Base content (bases) 622 759 401 221 398 361
Base content per 1 kb (bases) 450 550 290 160 288 261
Base content (%) 45.0% 55.0%
ND4L (size: 295 bases) GC AT G C A T
Base content (bases) 143 152 96 47 89 63
Base content per 1 kb (bases) 485 515 325 159 302 214
Base content (%) 48.5% 51.5%
ND5 (size: 1833 bases) GC AT G C A T
Base content (bases) 792 1041 531 261 541 500
Base content per 1 kb (bases) 432 568 290 142 295 273
Base content (%) 43.2% 56.8%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 232 290 158 74 91 199
Base content per 1 kb (bases) 444 556 303 142 174 381
Base content (%) 44.4% 55.6%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.31%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 10 (4.42%)
Threonine (Thr, T)
n = 18 (7.96%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 13 (5.75%)
Leucine (Leu, L)
n = 53 (23.45%)
Isoleucine (Ile, I)
n = 17 (7.52%)
Methionine (Met, M)
n = 8 (3.54%)
Proline (Pro, P)
n = 22 (9.73%)
Phenylalanine (Phe, F)
n = 8 (3.54%)
Tyrosine (Tyr, Y)
n = 6 (2.65%)
Tryptophan (Trp, W)
n = 6 (2.65%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 5 (2.21%)
Asparagine (Asn, N)
n = 9 (3.98%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 5 (2.21%)
Lysine (Lys, K)
n = 1 (0.44%)
Arginine (Arg, R)
n = 6 (2.65%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 9 7 22 10 12 1 8 6 2 5 4 3 1 6 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 3 10 5 0 2 3 6 1 13 5 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 8 0 1 5 0 1 0 3 4 2 6 0 3 6 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 3 2 0 0 1 0 0 2 4 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 86 56 37
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
28 65 35 99
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 70 68 74
ATP8 (size: 164 bases)
Amino acid sequence: MPQLNPAPWFAILVFTWLVFLTIVPTKILAHTYPNEPTSQSTEKPMPEPWTWPW
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.66%)
Serine (Ser, S)
n = 2 (3.77%)
Threonine (Thr, T)
n = 7 (13.21%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.66%)
Leucine (Leu, L)
n = 5 (9.43%)
Isoleucine (Ile, I)
n = 3 (5.66%)
Methionine (Met, M)
n = 2 (3.77%)
Proline (Pro, P)
n = 10 (18.87%)
Phenylalanine (Phe, F)
n = 3 (5.66%)
Tyrosine (Tyr, Y)
n = 1 (1.89%)
Tryptophan (Trp, W)
n = 5 (9.43%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.66%)
Asparagine (Asn, N)
n = 2 (3.77%)
Glutamine (Gln, Q)
n = 2 (3.77%)
Histidine (His, H)
n = 1 (1.89%)
Lysine (Lys, K)
n = 2 (3.77%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 0 1 0 1 2 1 1 2 0 1 2 0 0 2 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 1 1 0 1 0 0 0 0 3 5 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 2 1 1 0 0 0 0 1 0 1 0 0 1 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 1 2 0 0 2 0 0 0 0 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
9 17 17 11
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 21 11 16
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 16 18 14
COX1 (size: 1560 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.86%)
Alanine (Ala, A)
n = 50 (9.63%)
Serine (Ser, S)
n = 28 (5.39%)
Threonine (Thr, T)
n = 35 (6.74%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 41 (7.9%)
Leucine (Leu, L)
n = 63 (12.14%)
Isoleucine (Ile, I)
n = 42 (8.09%)
Methionine (Met, M)
n = 24 (4.62%)
Proline (Pro, P)
n = 29 (5.59%)
Phenylalanine (Phe, F)
n = 42 (8.09%)
Tyrosine (Tyr, Y)
n = 18 (3.47%)
Tryptophan (Trp, W)
n = 17 (3.28%)
Aspartic acid (Asp, D)
n = 14 (2.7%)
Glutamic acid (Glu, E)
n = 11 (2.12%)
Asparagine (Asn, N)
n = 15 (2.89%)
Glutamine (Gln, Q)
n = 8 (1.54%)
Histidine (His, H)
n = 19 (3.66%)
Lysine (Lys, K)
n = 8 (1.54%)
Arginine (Arg, R)
n = 8 (1.54%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
31 11 14 19 11 19 2 11 5 3 12 6 21 2 22 20
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
10 0 1 12 24 12 2 12 13 14 7 12 10 7 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 13 2 6 6 7 4 2 3 9 9 17 1 6 9 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 10 1 2 12 8 0 2 1 4 1 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
162 115 129 114
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 137 94 212
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
52 158 146 164
COX2 (size: 691 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 18 (7.86%)
Serine (Ser, S)
n = 15 (6.55%)
Threonine (Thr, T)
n = 10 (4.37%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 19 (8.3%)
Leucine (Leu, L)
n = 28 (12.23%)
Isoleucine (Ile, I)
n = 20 (8.73%)
Methionine (Met, M)
n = 11 (4.8%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 9 (3.93%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 15 (6.55%)
Asparagine (Asn, N)
n = 5 (2.18%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 2 9 12 5 6 1 4 7 1 9 4 3 3 4 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 2 6 9 1 2 2 4 1 7 4 3 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 4 0 1 7 4 0 0 3 5 4 5 0 3 2 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 11 4 5 8 4 0 3 1 2 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 62 53 41
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 54 64 87
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 64 70 78
COX3 (size: 785 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 8 6 13 5 6 3 5 6 3 3 6 3 2 9 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 5 10 8 0 9 4 7 2 4 9 0 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 12 0 4 4 3 0 0 3 3 9 12 0 1 0 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 8 2 2 3 2 0 1 0 4 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 70 51 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 67 55 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 92 70 72
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (7.39%)
Alanine (Ala, A)
n = 33 (8.71%)
Serine (Ser, S)
n = 22 (5.8%)
Threonine (Thr, T)
n = 22 (5.8%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 25 (6.6%)
Leucine (Leu, L)
n = 61 (16.09%)
Isoleucine (Ile, I)
n = 31 (8.18%)
Methionine (Met, M)
n = 7 (1.85%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 31 (8.18%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 13 (3.43%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 19 (5.01%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 12 5 13 17 17 5 9 6 0 7 8 8 2 13 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 7 15 11 0 7 8 10 3 5 11 5 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 6 0 5 10 6 0 0 1 6 8 13 0 6 13 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 4 1 4 6 7 2 0 1 7 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
101 99 89 91
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 97 75 155
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
28 149 101 102
ND1 (size: 975 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.56%)
Alanine (Ala, A)
n = 35 (10.8%)
Serine (Ser, S)
n = 21 (6.48%)
Threonine (Thr, T)
n = 18 (5.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 18 (5.56%)
Leucine (Leu, L)
n = 62 (19.14%)
Isoleucine (Ile, I)
n = 28 (8.64%)
Methionine (Met, M)
n = 9 (2.78%)
Proline (Pro, P)
n = 25 (7.72%)
Phenylalanine (Phe, F)
n = 19 (5.86%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 12 (3.7%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 4 (1.23%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 7 (2.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 9 5 14 10 21 2 14 4 3 7 4 2 5 9 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 8 14 12 1 5 5 6 2 11 7 7 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 5 0 3 9 6 0 1 2 5 6 8 1 7 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 6 2 2 7 0 2 2 2 1 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
86 90 77 72
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 96 57 136
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
33 98 97 97
ND2 (size: 1046 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.19%)
Alanine (Ala, A)
n = 39 (11.24%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 41 (11.82%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 82 (23.63%)
Isoleucine (Ile, I)
n = 21 (6.05%)
Methionine (Met, M)
n = 14 (4.03%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.88%)
Glutamine (Gln, Q)
n = 16 (4.61%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 1 10 36 11 21 4 9 16 0 2 2 2 1 7 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 8 16 15 0 4 8 6 0 5 9 6 1 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 12 1 3 7 10 0 0 3 3 4 11 1 7 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 1 1 2 9 0 1 0 2 1 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 120 98 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 121 56 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
25 95 121 107
ND3 (size: 1046 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.19%)
Alanine (Ala, A)
n = 39 (11.24%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 41 (11.82%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 82 (23.63%)
Isoleucine (Ile, I)
n = 21 (6.05%)
Methionine (Met, M)
n = 14 (4.03%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.88%)
Glutamine (Gln, Q)
n = 16 (4.61%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 1 10 36 11 21 4 9 16 0 2 2 2 1 7 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 8 16 15 0 4 8 6 0 5 9 6 1 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 12 1 3 7 10 0 0 3 3 4 11 1 7 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 1 1 2 9 0 1 0 2 1 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 120 98 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 121 56 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
25 95 121 107
ND4 (size: 1381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (5.66%)
Alanine (Ala, A)
n = 40 (8.71%)
Serine (Ser, S)
n = 34 (7.41%)
Threonine (Thr, T)
n = 37 (8.06%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 16 (3.49%)
Leucine (Leu, L)
n = 99 (21.57%)
Isoleucine (Ile, I)
n = 31 (6.75%)
Methionine (Met, M)
n = 28 (6.1%)
Proline (Pro, P)
n = 27 (5.88%)
Phenylalanine (Phe, F)
n = 18 (3.92%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 19 (4.14%)
Aspartic acid (Asp, D)
n = 7 (1.53%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 9 (1.96%)
Glutamine (Gln, Q)
n = 9 (1.96%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 11 21 25 19 32 5 16 9 0 3 6 7 0 7 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 0 4 8 15 17 0 6 4 7 9 5 10 12 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 13 3 5 9 5 2 7 6 8 6 19 2 4 5 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 8 2 0 7 10 0 3 2 6 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
99 139 128 94
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
73 125 70 192
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
49 137 163 111
ND4L (size: 295 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.15%)
Alanine (Ala, A)
n = 14 (14.43%)
Serine (Ser, S)
n = 10 (10.31%)
Threonine (Thr, T)
n = 8 (8.25%)
Cysteine (Cys, C)
n = 3 (3.09%)
Valine (Val, V)
n = 2 (2.06%)
Leucine (Leu, L)
n = 24 (24.74%)
Isoleucine (Ile, I)
n = 2 (2.06%)
Methionine (Met, M)
n = 4 (4.12%)
Proline (Pro, P)
n = 2 (2.06%)
Phenylalanine (Phe, F)
n = 7 (7.22%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.03%)
Aspartic acid (Asp, D)
n = 2 (2.06%)
Glutamic acid (Glu, E)
n = 2 (2.06%)
Asparagine (Asn, N)
n = 2 (2.06%)
Glutamine (Gln, Q)
n = 3 (3.09%)
Histidine (His, H)
n = 4 (4.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (3.09%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 0 0 8 3 6 1 6 3 0 1 0 1 0 4 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 2 1 8 5 0 1 2 1 1 0 1 1 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 2 0 1 3 4 0 0 2 0 0 1 0 1 1 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 1 1 1 1 0 0 0 1 2 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
25 30 18 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
14 32 13 39
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 34 32 24
ND5 (size: 1833 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.08%)
Alanine (Ala, A)
n = 56 (9.18%)
Serine (Ser, S)
n = 41 (6.72%)
Threonine (Thr, T)
n = 61 (10.0%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 32 (5.25%)
Leucine (Leu, L)
n = 98 (16.07%)
Isoleucine (Ile, I)
n = 45 (7.38%)
Methionine (Met, M)
n = 25 (4.1%)
Proline (Pro, P)
n = 29 (4.75%)
Phenylalanine (Phe, F)
n = 43 (7.05%)
Tyrosine (Tyr, Y)
n = 10 (1.64%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 12 (1.97%)
Glutamic acid (Glu, E)
n = 12 (1.97%)
Asparagine (Asn, N)
n = 29 (4.75%)
Glutamine (Gln, Q)
n = 17 (2.79%)
Histidine (His, H)
n = 19 (3.11%)
Lysine (Lys, K)
n = 20 (3.28%)
Arginine (Arg, R)
n = 10 (1.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
32 13 21 25 16 28 6 21 17 0 11 7 12 2 21 22
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 5 6 31 18 1 6 14 9 2 10 15 3 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
29 19 5 11 11 5 1 4 9 6 4 14 2 15 14 9
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 8 4 6 6 20 0 2 1 5 2 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
143 150 193 125
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
74 174 120 243
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
44 207 187 173
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.45%)
Alanine (Ala, A)
n = 17 (9.83%)
Serine (Ser, S)
n = 13 (7.51%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 1 (0.58%)
Valine (Val, V)
n = 23 (13.29%)
Leucine (Leu, L)
n = 28 (16.18%)
Isoleucine (Ile, I)
n = 5 (2.89%)
Methionine (Met, M)
n = 8 (4.62%)
Proline (Pro, P)
n = 7 (4.05%)
Phenylalanine (Phe, F)
n = 10 (5.78%)
Tyrosine (Tyr, Y)
n = 9 (5.2%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 2 (1.16%)
Glutamic acid (Glu, E)
n = 7 (4.05%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 5 (2.89%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 0 5 8 1 2 1 12 0 0 8 3 4 8 10 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 0 6 1 8 2 6 1 7 11 6 0 1 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 0 2 7 0 1 1 4 0 6 3 5 4 0 1 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 3 4 2 0 0 1 2 0 2 1 0 0 0 1 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 25 24 51
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 38 22 74
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
44 11 45 74
Total protein-coding genes (size: 11425 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 246 (6.47%)
Alanine (Ala, A)
n = 357 (9.38%)
Serine (Ser, S)
n = 242 (6.36%)
Threonine (Thr, T)
n = 288 (7.57%)
Cysteine (Cys, C)
n = 24 (0.63%)
Valine (Val, V)
n = 217 (5.7%)
Leucine (Leu, L)
n = 657 (17.27%)
Isoleucine (Ile, I)
n = 269 (7.07%)
Methionine (Met, M)
n = 154 (4.05%)
Proline (Pro, P)
n = 229 (6.02%)
Phenylalanine (Phe, F)
n = 232 (6.1%)
Tyrosine (Tyr, Y)
n = 114 (3.0%)
Tryptophan (Trp, W)
n = 121 (3.18%)
Aspartic acid (Asp, D)
n = 77 (2.02%)
Glutamic acid (Glu, E)
n = 100 (2.63%)
Asparagine (Asn, N)
n = 116 (3.05%)
Glutamine (Gln, Q)
n = 96 (2.52%)
Histidine (His, H)
n = 112 (2.94%)
Lysine (Lys, K)
n = 74 (1.95%)
Arginine (Arg, R)
n = 74 (1.95%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
191 78 107 200 111 179 34 122 84 12 72 52 67 26 119 113
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
47 5 19 69 158 122 8 61 69 77 39 82 91 54 2 60
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
116 98 14 53 73 52 9 19 36 56 58 116 11 54 62 40
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
72 70 30 28 49 71 3 16 12 40 6 0 0 5 1 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
997 1035 956 817
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
520 1061 695 1529
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
358 1169 1153 1125 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​S​a​n​d​e​r​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ c​a​n​a​d​e​n​s​i​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.