Viewing data for Nucifraga columbiana
| Scientific name | Nucifraga columbiana |
| Common name | Clark's nutcracker |
| Maximum lifespan | 17.40 years (Nucifraga columbiana@AnAge) |
| Total mtDNA (size: 16905 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7471 | 9434 | 4988 | 2483 | 4278 | 5156 |
| Base content per 1 kb (bases) | 442 | 558 | 295 | 147 | 253 | 305 |
| Base content (%) | 44.2% | 55.8% | ||||
| Total protein-coding genes (size: 11382 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5113 | 6269 | 3605 | 1508 | 2891 | 3378 |
| Base content per 1 kb (bases) | 449 | 551 | 317 | 132 | 254 | 297 |
| Base content (%) | 44.9% | 55.1% | ||||
| D-loop (size: 1318 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 544 | 774 | 368 | 176 | 403 | 371 |
| Base content per 1 kb (bases) | 413 | 587 | 279 | 134 | 306 | 281 |
| Base content (%) | 41.3% | 58.7% | ||||
| Total tRNA-coding genes (size: 1541 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 625 | 916 | 363 | 262 | 395 | 521 |
| Base content per 1 kb (bases) | 406 | 594 | 236 | 170 | 256 | 338 |
| Base content (%) | 40.6% | 59.4% | ||||
| Total rRNA-coding genes (size: 2577 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1160 | 1417 | 624 | 536 | 567 | 850 |
| Base content per 1 kb (bases) | 450 | 550 | 242 | 208 | 220 | 330 |
| Base content (%) | 45.0% | 55.0% | ||||
| 12S rRNA gene (size: 976 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 468 | 508 | 257 | 211 | 206 | 302 |
| Base content per 1 kb (bases) | 480 | 520 | 263 | 216 | 211 | 309 |
| Base content (%) | 48.0% | 52.0% | ||||
| 16S rRNA gene (size: 1601 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 692 | 909 | 367 | 325 | 361 | 548 |
| Base content per 1 kb (bases) | 432 | 568 | 229 | 203 | 225 | 342 |
| Base content (%) | 43.2% | 56.8% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 306 | 378 | 237 | 69 | 169 | 209 |
| Base content per 1 kb (bases) | 447 | 553 | 346 | 101 | 247 | 306 |
| Base content (%) | 44.7% | 55.3% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 65 | 103 | 56 | 9 | 46 | 57 |
| Base content per 1 kb (bases) | 387 | 613 | 333 | 54 | 274 | 339 |
| Base content (%) | 38.7% | 61.3% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 722 | 829 | 451 | 271 | 399 | 430 |
| Base content per 1 kb (bases) | 466 | 534 | 291 | 175 | 257 | 277 |
| Base content (%) | 46.6% | 53.4% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 314 | 370 | 203 | 111 | 168 | 202 |
| Base content per 1 kb (bases) | 459 | 541 | 297 | 162 | 246 | 295 |
| Base content (%) | 45.9% | 54.1% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 371 | 413 | 245 | 126 | 200 | 213 |
| Base content per 1 kb (bases) | 473 | 527 | 313 | 161 | 255 | 272 |
| Base content (%) | 47.3% | 52.7% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 516 | 627 | 371 | 145 | 293 | 334 |
| Base content per 1 kb (bases) | 451 | 549 | 325 | 127 | 256 | 292 |
| Base content (%) | 45.1% | 54.9% | ||||
| ND1 (size: 978 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 441 | 537 | 304 | 137 | 265 | 272 |
| Base content per 1 kb (bases) | 451 | 549 | 311 | 140 | 271 | 278 |
| Base content (%) | 45.1% | 54.9% | ||||
| ND2 (size: 1041 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 460 | 581 | 343 | 117 | 266 | 315 |
| Base content per 1 kb (bases) | 442 | 558 | 329 | 112 | 256 | 303 |
| Base content (%) | 44.2% | 55.8% | ||||
| ND3 (size: 351 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 162 | 189 | 110 | 52 | 88 | 101 |
| Base content per 1 kb (bases) | 462 | 538 | 313 | 148 | 251 | 288 |
| Base content (%) | 46.2% | 53.8% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 590 | 788 | 437 | 153 | 358 | 430 |
| Base content per 1 kb (bases) | 428 | 572 | 317 | 111 | 260 | 312 |
| Base content (%) | 42.8% | 57.2% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 141 | 156 | 104 | 37 | 82 | 74 |
| Base content per 1 kb (bases) | 475 | 525 | 350 | 125 | 276 | 249 |
| Base content (%) | 47.5% | 52.5% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 781 | 1037 | 564 | 217 | 480 | 557 |
| Base content per 1 kb (bases) | 430 | 570 | 310 | 119 | 264 | 306 |
| Base content (%) | 43.0% | 57.0% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 249 | 273 | 183 | 66 | 81 | 192 |
| Base content per 1 kb (bases) | 477 | 523 | 351 | 126 | 155 | 368 |
| Base content (%) | 47.7% | 52.3% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.08%) 
Alanine (Ala, A)
n = 17 (7.49%) 
Serine (Ser, S)
n = 17 (7.49%) 
Threonine (Thr, T)
n = 24 (10.57%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 7 (3.08%) 
Leucine (Leu, L)
n = 60 (26.43%) 
Isoleucine (Ile, I)
n = 19 (8.37%) 
Methionine (Met, M)
n = 9 (3.96%) 
Proline (Pro, P)
n = 15 (6.61%) 
Phenylalanine (Phe, F)
n = 9 (3.96%) 
Tyrosine (Tyr, Y)
n = 3 (1.32%) 
Tryptophan (Trp, W)
n = 4 (1.76%) 
Aspartic acid (Asp, D)
n = 2 (0.88%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 10 (4.41%) 
Glutamine (Gln, Q)
n = 9 (3.96%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 3 (1.32%) 
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 16 | 7 | 6 | 10 | 33 | 3 | 8 | 9 | 0 | 1 | 4 | 2 | 0 | 2 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 2 | 9 | 5 | 1 | 2 | 3 | 0 | 2 | 0 | 6 | 8 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 10 | 1 | 0 | 4 | 7 | 1 | 2 | 3 | 0 | 3 | 0 | 0 | 0 | 10 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 4 | 0 | 1 | 1 | 3 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 37 | 84 | 70 | 37 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 21 | 68 | 35 | 104 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 85 | 104 | 28 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPNPWFFIMLISWFTYSMIIQPKLLSHISMNPPSNKLQTAQSTSPWTWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 7 (12.73%)
Threonine (Thr, T)
n = 5 (9.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 5 (9.09%)
Isoleucine (Ile, I)
n = 5 (9.09%)
Methionine (Met, M)
n = 4 (7.27%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 4 (7.27%)
Glutamine (Gln, Q)
n = 4 (7.27%)
Histidine (His, H)
n = 1 (1.82%)
Lysine (Lys, K)
n = 2 (3.64%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 4 | 2 | 1 | 1 | 3 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 1 | 0 | 2 | 3 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1 | 18 | 21 | 16 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 20 | 13 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 18 | 23 | 13 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 47 (9.11%)
Serine (Ser, S)
n = 27 (5.23%)
Threonine (Thr, T)
n = 36 (6.98%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.36%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 42 (8.14%)
Methionine (Met, M)
n = 23 (4.46%)
Proline (Pro, P)
n = 30 (5.81%)
Phenylalanine (Phe, F)
n = 43 (8.33%)
Tyrosine (Tyr, Y)
n = 17 (3.29%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 9 (1.74%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 28 | 15 | 11 | 5 | 39 | 8 | 0 | 9 | 0 | 7 | 7 | 16 | 8 | 7 | 36 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 9 | 16 | 22 | 0 | 8 | 10 | 23 | 6 | 4 | 4 | 22 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 14 | 1 | 4 | 11 | 8 | 0 | 1 | 3 | 6 | 11 | 0 | 0 | 3 | 12 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 6 | 4 | 1 | 14 | 9 | 0 | 1 | 1 | 6 | 0 | 0 | 1 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 157 | 129 | 130 | 101 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 78 | 136 | 94 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 36 | 186 | 206 | 89 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 17 (7.49%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 17 (7.49%)
Leucine (Leu, L)
n = 29 (12.78%)
Isoleucine (Ile, I)
n = 13 (5.73%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 12 (5.29%)
Phenylalanine (Phe, F)
n = 10 (4.41%)
Tyrosine (Tyr, Y)
n = 7 (3.08%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 13 (5.73%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 8 | 9 | 3 | 5 | 18 | 3 | 0 | 5 | 1 | 3 | 7 | 6 | 1 | 2 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 3 | 5 | 8 | 4 | 0 | 3 | 1 | 4 | 0 | 6 | 0 | 5 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 4 | 1 | 4 | 5 | 6 | 0 | 0 | 3 | 2 | 5 | 0 | 0 | 0 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 9 | 5 | 5 | 8 | 4 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 69 | 61 | 57 | 41 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 60 | 60 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 82 | 85 | 44 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 14 (5.38%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 5 (1.92%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 11 | 5 | 5 | 7 | 19 | 2 | 0 | 6 | 2 | 3 | 5 | 7 | 1 | 8 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 2 | 12 | 9 | 0 | 2 | 7 | 8 | 2 | 2 | 6 | 6 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 13 | 0 | 5 | 3 | 2 | 0 | 0 | 4 | 2 | 10 | 0 | 0 | 1 | 3 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 4 | 3 | 3 | 2 | 4 | 1 | 2 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 75 | 59 | 57 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 69 | 56 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 101 | 98 | 47 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.32%)
Alanine (Ala, A)
n = 27 (7.11%)
Serine (Ser, S)
n = 23 (6.05%)
Threonine (Thr, T)
n = 24 (6.32%)
Cysteine (Cys, C)
n = 4 (1.05%)
Valine (Val, V)
n = 20 (5.26%)
Leucine (Leu, L)
n = 67 (17.63%)
Isoleucine (Ile, I)
n = 34 (8.95%)
Methionine (Met, M)
n = 8 (2.11%)
Proline (Pro, P)
n = 24 (6.32%)
Phenylalanine (Phe, F)
n = 29 (7.63%)
Tyrosine (Tyr, Y)
n = 12 (3.16%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 8 (2.11%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 12 (3.16%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 25 | 7 | 2 | 16 | 40 | 3 | 6 | 8 | 0 | 3 | 7 | 8 | 2 | 6 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 4 | 7 | 10 | 9 | 1 | 2 | 5 | 17 | 0 | 4 | 9 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 12 | 1 | 2 | 11 | 7 | 1 | 0 | 2 | 0 | 12 | 0 | 0 | 7 | 14 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 1 | 1 | 7 | 9 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 86 | 113 | 98 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 49 | 96 | 78 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 162 | 158 | 51 | ||||||||||||
| ND1 (size: 978 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.31%)
Alanine (Ala, A)
n = 31 (9.54%)
Serine (Ser, S)
n = 25 (7.69%)
Threonine (Thr, T)
n = 14 (4.31%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 17 (5.23%)
Leucine (Leu, L)
n = 59 (18.15%)
Isoleucine (Ile, I)
n = 27 (8.31%)
Methionine (Met, M)
n = 15 (4.62%)
Proline (Pro, P)
n = 26 (8.0%)
Phenylalanine (Phe, F)
n = 22 (6.77%)
Tyrosine (Tyr, Y)
n = 14 (4.31%)
Tryptophan (Trp, W)
n = 8 (2.46%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.38%)
Asparagine (Asn, N)
n = 13 (4.0%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 7 (2.15%)
Arginine (Arg, R)
n = 8 (2.46%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 17 | 9 | 8 | 10 | 31 | 5 | 5 | 6 | 0 | 4 | 4 | 7 | 2 | 3 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 5 | 12 | 14 | 0 | 2 | 3 | 6 | 3 | 5 | 8 | 13 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 8 | 0 | 2 | 11 | 6 | 0 | 2 | 4 | 4 | 10 | 0 | 0 | 7 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 6 | 5 | 0 | 4 | 7 | 0 | 2 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 96 | 83 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 90 | 57 | 140 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 118 | 132 | 55 | ||||||||||||
| ND2 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 31 (8.96%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.47%)
Leucine (Leu, L)
n = 64 (18.5%)
Isoleucine (Ile, I)
n = 28 (8.09%)
Methionine (Met, M)
n = 18 (5.2%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 15 (4.34%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 11 (3.18%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 9 (2.6%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 20 | 10 | 13 | 10 | 37 | 3 | 1 | 9 | 2 | 3 | 6 | 3 | 0 | 5 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 5 | 13 | 11 | 2 | 2 | 2 | 6 | 3 | 3 | 10 | 9 | 0 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 15 | 1 | 6 | 7 | 7 | 2 | 0 | 4 | 3 | 5 | 0 | 0 | 4 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 2 | 2 | 1 | 1 | 14 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 62 | 108 | 119 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 119 | 60 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 116 | 136 | 71 | ||||||||||||
| ND3 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 31 (8.96%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.47%)
Leucine (Leu, L)
n = 64 (18.5%)
Isoleucine (Ile, I)
n = 28 (8.09%)
Methionine (Met, M)
n = 18 (5.2%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 15 (4.34%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 11 (3.18%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 9 (2.6%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 20 | 10 | 13 | 10 | 37 | 3 | 1 | 9 | 2 | 3 | 6 | 3 | 0 | 5 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 5 | 13 | 11 | 2 | 2 | 2 | 6 | 3 | 3 | 10 | 9 | 0 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 15 | 1 | 6 | 7 | 7 | 2 | 0 | 4 | 3 | 5 | 0 | 0 | 4 | 7 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 2 | 2 | 1 | 1 | 14 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 62 | 108 | 119 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 119 | 60 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 116 | 136 | 71 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (4.15%)
Alanine (Ala, A)
n = 33 (7.21%)
Serine (Ser, S)
n = 36 (7.86%)
Threonine (Thr, T)
n = 45 (9.83%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 18 (3.93%)
Leucine (Leu, L)
n = 94 (20.52%)
Isoleucine (Ile, I)
n = 38 (8.3%)
Methionine (Met, M)
n = 26 (5.68%)
Proline (Pro, P)
n = 28 (6.11%)
Phenylalanine (Phe, F)
n = 14 (3.06%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 17 (3.71%)
Glutamine (Gln, Q)
n = 13 (2.84%)
Histidine (His, H)
n = 16 (3.49%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 12 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 22 | 21 | 12 | 17 | 48 | 4 | 13 | 12 | 1 | 1 | 9 | 7 | 1 | 4 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 3 | 5 | 15 | 13 | 0 | 1 | 7 | 9 | 2 | 7 | 6 | 14 | 1 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 18 | 0 | 6 | 11 | 9 | 1 | 1 | 8 | 5 | 8 | 0 | 0 | 6 | 11 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 10 | 0 | 0 | 2 | 9 | 1 | 1 | 2 | 9 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 82 | 150 | 145 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 55 | 133 | 81 | 190 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 154 | 204 | 85 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 3 (3.06%)
Alanine (Ala, A)
n = 13 (13.27%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 8 (8.16%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 5 | 4 | 2 | 9 | 1 | 6 | 4 | 0 | 0 | 1 | 1 | 0 | 0 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 1 | 8 | 4 | 0 | 1 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 3 | 0 | 5 | 4 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 21 | 29 | 22 | 27 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 13 | 32 | 16 | 38 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 43 | 36 | 17 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.45%)
Alanine (Ala, A)
n = 48 (7.93%)
Serine (Ser, S)
n = 50 (8.26%)
Threonine (Thr, T)
n = 61 (10.08%)
Cysteine (Cys, C)
n = 7 (1.16%)
Valine (Val, V)
n = 21 (3.47%)
Leucine (Leu, L)
n = 102 (16.86%)
Isoleucine (Ile, I)
n = 57 (9.42%)
Methionine (Met, M)
n = 27 (4.46%)
Proline (Pro, P)
n = 31 (5.12%)
Phenylalanine (Phe, F)
n = 36 (5.95%)
Tyrosine (Tyr, Y)
n = 13 (2.15%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 9 (1.49%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 26 (4.3%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 13 (2.15%)
Lysine (Lys, K)
n = 20 (3.31%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 26 | 31 | 26 | 11 | 22 | 53 | 10 | 6 | 17 | 2 | 3 | 11 | 7 | 0 | 11 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 3 | 4 | 15 | 19 | 13 | 1 | 4 | 8 | 18 | 3 | 6 | 7 | 16 | 2 | 16 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 24 | 21 | 0 | 8 | 13 | 18 | 0 | 2 | 9 | 5 | 8 | 0 | 0 | 10 | 16 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 2 | 0 | 9 | 19 | 1 | 0 | 2 | 7 | 0 | 1 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 122 | 168 | 203 | 113 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 179 | 111 | 243 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 217 | 243 | 124 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.61%)
Alanine (Ala, A)
n = 12 (6.94%)
Serine (Ser, S)
n = 15 (8.67%)
Threonine (Thr, T)
n = 3 (1.73%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 35 (20.23%)
Leucine (Leu, L)
n = 24 (13.87%)
Isoleucine (Ile, I)
n = 3 (1.73%)
Methionine (Met, M)
n = 10 (5.78%)
Proline (Pro, P)
n = 4 (2.31%)
Phenylalanine (Phe, F)
n = 10 (5.78%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 4 (2.31%)
Glutamic acid (Glu, E)
n = 3 (1.73%)
Asparagine (Asn, N)
n = 4 (2.31%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 5 (2.89%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 0 | 3 | 1 | 1 | 4 | 9 | 9 | 0 | 0 | 15 | 2 | 6 | 12 | 10 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 1 | 1 | 3 | 0 | 2 | 7 | 7 | 1 | 3 | 16 | 2 | 1 | 0 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 0 | 8 | 0 | 3 | 1 | 1 | 2 | 5 | 2 | 1 | 0 | 4 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 2 | 3 | 1 | 0 | 0 | 1 | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 81 | 24 | 23 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 31 | 19 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 60 | 11 | 39 | 64 | ||||||||||||
| Total protein-coding genes (size: 11399 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 219 (5.77%)
Alanine (Ala, A)
n = 309 (8.14%)
Serine (Ser, S)
n = 280 (7.37%)
Threonine (Thr, T)
n = 311 (8.19%)
Cysteine (Cys, C)
n = 28 (0.74%)
Valine (Val, V)
n = 204 (5.37%)
Leucine (Leu, L)
n = 648 (17.06%)
Isoleucine (Ile, I)
n = 295 (7.77%)
Methionine (Met, M)
n = 172 (4.53%)
Proline (Pro, P)
n = 223 (5.87%)
Phenylalanine (Phe, F)
n = 227 (5.98%)
Tyrosine (Tyr, Y)
n = 110 (2.9%)
Tryptophan (Trp, W)
n = 107 (2.82%)
Aspartic acid (Asp, D)
n = 68 (1.79%)
Glutamic acid (Glu, E)
n = 89 (2.34%)
Asparagine (Asn, N)
n = 137 (3.61%)
Glutamine (Gln, Q)
n = 101 (2.66%)
Histidine (His, H)
n = 103 (2.71%)
Lysine (Lys, K)
n = 84 (2.21%)
Arginine (Arg, R)
n = 73 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 102 | 193 | 121 | 78 | 110 | 348 | 56 | 56 | 92 | 9 | 43 | 63 | 71 | 27 | 62 | 165 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 51 | 6 | 22 | 59 | 128 | 109 | 13 | 34 | 50 | 97 | 38 | 43 | 60 | 114 | 6 | 79 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 101 | 126 | 5 | 52 | 88 | 76 | 6 | 11 | 47 | 34 | 76 | 3 | 0 | 44 | 93 | 27 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 76 | 64 | 25 | 16 | 52 | 80 | 4 | 10 | 10 | 47 | 6 | 2 | 1 | 8 | 0 | 104 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 889 | 1092 | 1060 | 758 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 488 | 1065 | 700 | 1546 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 250 | 1334 | 1515 | 700 | ||||||||||||
>NC_022839.1 Nucifraga columbiana mitochondrion, complete genome GTCCATGTAGCTTACAATAAAGCATGACACTGAAGATGTCAAGACGGCTGCCACAAACACCCATGGACAA AAGACTTAGTCCTAACCTTACTGTTGGTTATTGCCAGAGATATACATGCAAGTATCCGCATTCCAGTGTA AATGCCCTAGGCACCCTTTAACCAAGTCGATAGGAGCGGGTATCAGGCACACACAATTGTAGCCCAAGAC GCCTTGCACTTGCCACGCCCCCACGGGTACTCAGCAGTAGTAAACATTAAGCAATGAGTGTAAACTTGAC TTAGTCATGGCAACCTTAAGAGTCGGTAAATCCTGTGCCAGCCACCGCGGTCAGACAGGAGACTCAAATT AACAGTATAACGGCGTAAAGGGTGGTAACATGCTATCTAAGTAACTAAGATTAAAAAGCAACTGAGATGT AATAATCCCAAGATGCTCATAAGGCCAGCTACCAAAGAAGATCTTAGGCTAACGATTAATTGAAATCCAC GAAAGCCAGGGCCCAAACTGGGATTAGATACCCCACTATGCCTGGCCCTAAATCTTGATGCTCTATGCTA CCTGAGCATCCGCCCGAGAACTACGAGCACAAACGCTTAAAACTCTAAGGACTTGGCGGTGTCCCAAACC CACCTAGAGGAGCCTGTTCTGTAATCGATGATCCACGATATTACCTGACCACTCCTTGCTGAATCAGCCT ACATACCGCCGTCGCCAGCCCACCCCCCCTGATGGTTCAACAGTGAGCGCAATAGTCCCTACCCACTAAT AAGACAGGTCAAGGTATAGCCCATGGAGTGGAAGCAATGGGCTACATTTTCTAGATTAGAACATCACGGC AAGGAGATCTGAAATGGCCTCCAGAAGGCGGATTTAGCAGTAAAGCGGGACAATCGAGCCCTCTTTAAGC CGGCCCTGGGACACGTACATACCGCCCGTCACCCTCCTCAAAAGCGACCTAATCCTAATACATTAATACG CTATTCAGCTAAAGAGGAGGCAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGCACTTAGACAACCAAGA CGTAGCTTAAACAAAAGCATTCAGCTTACACCTGAAAAATATCTGCTGACACCAGATCGTCTTGATGCCA AATTCTAGCCCAACCACATTGACCTGGAATAACAAAGCTACTGCATACACCAAACTAAAGCATTTACTAG TCTTAGTATAGGCGATAGAAAAGACACCCATTGGCGCGATAGAGATCACGTACCGTAAGGGAAAGATGAA ATAATAATGAAACAAATAAGCTATAAACAGCAAAGATCAACCCTTGTACCTTTTGCATCATGGTCTAGCA AGAAAAACCAAGCAAAATGAGTTTAAGTTTGCCACCCCGAAACCCAAGCGAGCTACTTGTGAGCAGCTAT TATTGAGCGAACCCGTCTCTGTTGCAAAAGAGTGGGATGACTTACTAGTAGAGGTGAAAAGCCAATCGAG CTGGGTGATAGCTGGTTGCCTGTGAAACGAATCTTAGTTCACTCTTAATTCTCCTCCAAGGAAACTAACA AAACCCTAATGAAGCGAATTAAGGGCTATTTAAAGGGGGTACAGCTCCTTTAAAAAAGAATACAATCTCT ACGAGCGGATAAATAATCTATAGAAAGATCCATTGTGGGCCTTCAAGCAGCCATCAACAAAGAGTGCGTT AAAGCTCCTCGACTAAAAATATAAGAACTTCATGACTCCCTCATCATTAACAGGCTAACCTATATGTAAA TAGGAGAATTAATGCTAGAATGAGTAACCAGGGTCCTCCCTCTACGACGCAAGCTTACATCTTTACATTA TTAACAAATCACCAAGATACGACAAATCAAACAAGCAGAGTATCAGGTATATTGTTAACCCGACAGAGGA GCGTCCATTAAGAAAGATTAAAACCTGTAAAAGGAACTAGGCAAACACGTCAAGGCCCGACTGTTTACCA AAAACATAGCCTTCAGCAAACAACAAACAAGTATTGAAGGTGATGCCTGCCCTGTGACTTAGTGTTTAAC GGCCGCGGTATCCTAACCGTGCAAAGGTAGCGCAATCAATTGTCTCATAAATCGGGACCTGTATGAATGG CTAAACGAGGTCTTAACTGTCTCTTACAGGCGATCGGTGAAATTGATCTCCCTGTGCAAAAGCAGGGATA ACTACATAAGACGAGAAGACCCTGTGGAGCTTAAAAATCAGCAGCCACCCTACTTCACATTCACACCCAC TGGGTACACGCTTTAAAAGGAACTGGCCTGCAATTTTTCGGTTGGGGCGACCTTGGAGAAAAACAAATCC TCCAAAAATTAGACCACAACTCTAGACTGAGAGCGACCCCTCAACGTGCGAATAGCACCCAGACCCAATA TAATTGATCAATGGACCAAGTTACCCCAGGGATAACAGCGCAATCTCCTCCGAGAGTCCGTATCGACGGG GAGGTTTACGACCTCGATGTTGGATCAGGACATCCTAGTGGTGCAGCCGCTACTAAGGGTTCGTTTGTTC AACGATTAATAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCTATGATGAA CTCTTCCCAGTACGAAAGGACAGGAAAAGTAAGGCCAATACTACAGGCAAGCCTTCGCCTTAAGTAATGA ATTCAACTAAATTACGAAAGGCTATCACACTTCAACCACGTCCTAGAAAAGGACCAGCTAGCGTGGCAGA GCTCGGAAAATGCAAAAGGCTTAAGTCCTTTAAATCAGAGGTTCAAATCCTCTCCCTAGCTAAACTTCAA ATGACCAACTACCCCTTCCTAATCAACCTTATTATAGTCCTCTCTTACGCTATCCCAATCCTAATCGCTG TAGCCTTCTTAACACTAGTAGAGCGAAAAATCTTAAGCTATATACAAGGTCGAAAAGGTCCTAATGTTGT GGGCCCATTCGGGCTTCTCCAACCCGTAGCAGACGGAGTAAAACTATTCATCAAAGAACCAATTCGCCCA TCAGCATCCTCCCCAATCCTATTTATTACCACCCCCATACTAGCCCTCTTCCTGGCAATCTCCATCTGAG CCCCACTCCCTATCCCATTCCCCCTCGCAGACCTTAATCTCGGGCTACTATTCATGCTGGCCATATCAAG CCTAGCAGTATACTCCATCCTATGATCCGGCTGAGCCTCCAACTCAAAATACGCCCTAATTGGAGCATTA CGAGCAGTAGCCCAAACAATCTCATATGAAGTTACCCTAGCAATCATCCTACTGTCCATTATCCTCCTTA GCGGAAATTACGCCCTAAGTACCCTAGCAGTCGTTCAAGAGCCCCTATTCCTAATTTTCTCTTGCTGACC ACTTGCTATAATATGATATGTGTCCACACTAGCTGAGACAAATCGTGCCCCATTCGACCTCACAGAAGGA GAATCAGAACTAGTCTCAGGGTTTAACGTAGAATATGCAGCAGGACCATTCGCCCTGTTCTTCCTAGCAG AGTACGCAAATATCATACTTATGAATACATTAACTGTTATTCTCTTCTTCAATCCAAGTATGTTCAACCC CCCTCAAGAGCTCTTCCCTATAATCCTAGCCACAAAAGTCCTACTTCTATCCATAGGATTCCTATGAATT CGTGCCTCCTACCCACGATTTCGATACGACCAACTAATGCACTTACTATGAAAAAACTTCCTACCTCTAA CACTTGCTCTGTGCCTATGACACATTAGCATGCCAATTTCCTACGCAGGCCTACCCCCCTACCTAAGAGG CCACTAGGAAATGTGCCTGAATACCAAAAGGGTCACTATGATAAAGTGAACATAGAGGTATACCAACCCT CTCATTTCCTACGCTTTAGAAAAACAGGAATCGAACCTGTACGAGAGGGATCAAAACCCTCCATACTTCC TTTATATTACTTTCTAGTAGGGTAAGCTAAACAAGCTATCGGGCCCATACCCCGAAAATGATGGTTTAAC CCCTTCCCCTGCTAATGAACCCCCAAGCAAAACTAGTCTTTATCACTAGCCTATTTCTAGGGACAACCAT CACAATTTCAAGCAACCACTGAGTTATAGCCTGAACTGGCCTTGAAATCAACACACTCGCCATCCTACCC CTAATCTCAAAATCTCATCACCCCCGGGCCATTGAGGCAGCAACCAAATACTTCCTAGTACAGGCAACTG CTTCAACTCTAGTACTATTTTCCAGCATAACTAATGCGTGATACACTGGGCAGTGAGATATTACCCAACT AACCCACCCAACATCTTCGCTAATCCTAACTGCAGCCATTTCAATGAAACTAGGACTAGCCCCCTTCCAT TTTTGATTCCCAGAAGTTCTACAAGGATCCCCTCTCACTACCGGACTTCTTCTATCCACAGTCATGAAAT TCCCACCAATCACCCTACTCTTTATAACCTCCCAAGCCCTAAACCCCACACTTCTAACCACTATGGCTAT CCTTTCCGTAGCTCTAGGAGGATGAATAGGGCTAAATCAAACACAAACCCGAAAAATCATGGCCTTCTCT TCTATCGCCCACCTAGGTTGAATGGCCATTATTCTGGTTTACTATCCCAAACTTACCCTACTAAACTTCT ATCTATACGCCATAATAACCGCTGCCATCTTCCTAACTCTAAATGCAACAAAAGTCCTAAAACTATCGAC ACTAATAACTGCATGAACAAAAGCACCTTCACTTAGCACAATCCTCCTACTAACACTCCTATCTTTAGCC GGCCTGCCCCCTCTAACTGGTTTCCTCCCAAAATGACTTATCATCCAAGAGCTAACCAAACAAGACATGG CCCCAGCAGCGATAGTCATCTCACTCCTTTCCCTACTAGGACTTTTCTTCTATCTTCGCCTCGCATACTG CGCAACAATCACACTTCCACCCCATACGACAAATCACATAAAACAATGACATGTCAACAAACCAATTAAC CCCTCAATCGCTGTCCTAACTACCCTCTCTATCATGCTCCTGCCAATCTCCCCCATACTTACTACCATCA TTTAAAAGAAACTTAGGTTTACTGAAACCGAAGGCCTTCAAAGCCTTAAACAAGAGTGGAACCCTCTTAG TTTCTGTTAAAATCCGCAGGACATTACCCTGCATCTCCTGAATGCAACTCAGACGCTTTGATTAAGCTAG GACTTTACATCCCCTAGACAGATGGGCTTCGATCCCATAATACTATAGTTAACAGCTATATGCCCCAAAC CAACAGGCTTCTGCCTAACAATAGGCCCCGGTACACAATTAGTGCACATCAATGAGCTTGCAACTCACCA TGAACTTCACTACAGGGCCGATAAGAAGAGGAATTAAACCTCTGTAAAAAGGACTACAGCCTAACGCTTA TACACTCAGCCATCTTACCTGTGACTTTCATTAACCGATGACTATTCTCAACCAACCACAAAGACATTGG CACCCTGTACCTGATCTTCGGAGCATGAGCCGGAATAGTAGGTACCGCCCTAAGTCTTCTTATCCGAGCA GAACTAGGCCAACCCGGTGCACTGCTAGGAGACGACCAAATCTACAACGTCATTGTTACAGCCCATGCTT TCGTCATAATCTTTTTCATAGTGATACCAATCATAATCGGAGGATTCGGAAACTGACTAGTTCCCCTGAT AATTGGTGCCCCAGACATAGCATTCCCACGAATAAACAACATGAGCTTCTGACTTCTCCCTCCTTCATTC CTTCTTCTCCTAGCTTCCTCTACAGTAGAGGCAGGGGTAGGAACAGGATGAACTGTATACCCACCACTAG CCGGAAATCTAGCCCACGCCGGAGCTTCAGTTGACCTGGCCATCTTCTCACTCCACCTGGCAGGTATCTC CTCTATCCTAGGTGCAATCAATTTCATCACCACAGCAATTAACATAAAACCCCCAGCCCTATCACAATAT CAAACCCCTCTGTTCGTGTGATCCGTGCTAATTACCGCAGTACTACTACTTCTTTCCCTACCAGTCCTAG CTGCCGGAATCACTATGCTTCTAACAGACCGTAACCTCAATACTACATTCTTTGACCCTGCAGGAGGAGG AGACCCAGTGCTATACCAACATCTATTCTGATTCTTCGGGCACCCAGAAGTTTACATCCTAATTCTACCA GGGTTTGGTATCATTTCCCACGTCGTAGCATACTATGCAGGCAAAAAAGAGCCATTCGGCTACATAGGAA TAGTATGAGCTATACTATCCATCGGATTCCTAGGCTTCATTGTTTGAGCACATCACATGTTTACAGTCGG GATAGACGTAGACACCCGAGCATACTTTACATCAGCAACCATGATCATTGCCATCCCAACCGGAATTAAA GTGTTCAGCTGACTAGCAACACTACATGGAGGGACAATCAAATGAGACCCACCAATGCTATGAGCTCTAG GCTTCATCTTCCTTTTCACTATCGGTGGACTAACGGGAATCGTCCTAGCAAACTCTTCCCTAGACATCGC CCTGCACGACACTTATTATGTAGTAGCACACTTCCACTACGTACTATCCATAGGCGCAGTGTTCGCAATC CTAGCAGGCTTTACCCACTGATTCCCACTATTCACTGGCTATACCCTCCACGCTACATGAGCCAAAATTC ACTTCGGAGTAATGTTCGTAGGAGTGAACCTTACTTTCTTCCCACAACACTTCCTAGGGCTAGCCGGTAT GCCACGACGATACTCAGACTACCCAGATGCCTATACCCTATGAAACACTATCTCCTCCGTAGGATCACTA ATCTCTCTAACAGCTGTAATTATGCTAATATTCATCATCTGAGAAGCCTTTGCATCCAAACGCAAAGTCC TTCAACCAGAACTAATTAGCACAAACGTTGAGTGAATCCACGGCTGCCCACCCCCATTCCACACATTCGA GGAACCAGCTTTCGTACAAGTTCAAGAAAGGAAGGAATCGAACCCTCATATGTTGGTTTCAAGCCAACCG CATAAACCACCTATGCTTCTTTCTTATTCAGAGGTGTTAGTAAAACCATTACATAGCCTTGTCAAGACTA AATCACTGGTGAGACCCCAGTACACCTCAACACAAATATGGCCAACCACATGCAATTCGGTTTCCAAGAC GCTTCATCCCCTATTATAGAAGAGCTAGTAGAATTCCACGATCACGCCCTAATAACCGCTCTAGCCATCT GCAGCCTAGTGCTATACCTGCTAACTATAATACTCACCGAAAAACTATCATCCAACACGGTCGATGCACA AGAGATCGAACTTGTTTGAACAATCCTCCCTGCAATAGTCCTAATCATGCTCGCCCTACCATCCCTACGA ATTCTCTACATAATGGATGAGATTAACGAGCCTGACCTAACACTGAAAGCCATCGGACATCAGTGATATT GAACCTATGAATACACCGACTTCAAAGACCTGACATTTGACTCCTACATGACACCAACCGCAGATCTTCC TATAGGTCACTTTCGACTACTAGAAGTAGATCACCGTGTAATCGTTCCAATAGAGTCACTAGTCCGAGTC ATTGTTACTGCCGACGACGTACTTCACTCATGAGCCGTCCCAAGCCTAGGCGTAAAAACTGACGCAATCC CAGGACGACTAAACCAAACTTCATTCACCGCTACCCGACCTGGAGTCTTCTACGGTCAATGCTCAGAAAT CTGCGGAGCTAACCACAGCTTCATACCTATTGTAGTCGAATCTGCTCCGCTCGCCAACTTCGAAAACTGA TCTTCTCTACTATCTTCCTAATCATTAAGAAGCTATGAATCAGCACTAGCCTTTTAAGCTAGAGAAAGAG GGCTATTAACCCTCCTTAATGACATGCCTCAACTAAACCCAAATCCATGATTTTTTATCATGCTAATTTC ATGATTCACCTACTCTATAATCATCCAACCTAAACTACTTTCCCACATCTCCATAAATCCCCCATCTAAC AAACTCCAAACAGCCCAAAGTACTTCCCCTTGAACCTGACCATGAACCTAAGCTTCTTTGATCAATTCTC AAGTCCATCCATTCTAGGCATTCCCCTAGTTCTAATCGCAATAACATTCCCAGCCCTCCTCCTACCGTCC CAAAGCAACCGATGACTCACTGACCGATTATCAACCTTACAATCATGACTCATCAACCTAATCACAAAAC AACTGATAATGCCATTAAACAACAAAGGGCACAAATGAGCACTAATCCTAACATCACTAATAATCTTCCT ACTCTTTACCAACCTACTAGGTCTACTACCCTACACATTCACCCCAACTACCCAACTCTCCATAAACCTA GCCCTAGCCACCCCCTTATGACTCGCCACTCTACTTACAGGGCTACGAAACCAACCCTCAATATCCCTAG CTCATCTTCTGCCAGAAGGTACTCCAACTCCCCTAATCCCAGCCTTAATCCTCATCGAAACAACTAGTCT TCTCATCCGCCCCCTAGCCCTGGGCGTCCGCCTTACAGCCAACCTCACAGCAGGCCACTTACTAATCCAA CTTATCTCGACGGCCACTATTGCGCTAATCTCAACAATACCAGCAATCTCACTACTAACATTACTAGTCC TATTCCTACTTACTATCTTAGAAGTAGCAGTAGCTATAATCCAAGCCTACGTCTTCGTCCTACTACTAAG CCTATACCTACAAGAAAACATCTAAACCACCAATGACTCACCAAGCACACTCTTACCATATAGTCGATCC CAGCCCATGACCTATCCTAGGAGCAGCCGCCGCCCTCCTTACTACATCTGGCCTAACTATGTGATTCCAC TACAACCTGCCCTACCTGCTAATCATCGGACTTACCTCTACAGCCCTAGTCATGCTCCAATGATGACGTG ACATCATCCGAGAGAGCACATTCCAGGGTCACCACACACCCACAGTACAAAAAGGCCTACGATATGGAAT AGTCCTATTCATCACATCAGAAGCATTCTTCTTCCTAGGCTTTTTCTGAGCATTTTTCCACTCCAGCCTA GCCCCAACACCAGAACTAGGCGGACAGTGACCCCCAGTTGGAATTAAACCTCTAAATCCAATAGACGTAC CCCTCCTAAACACCGCCATCCTTCTAGCCTCAGGGGTTACAGTTACATGAGCACACCACAGCATCATAGA AGCCAACCGAAAGCAAGCAATCCAAGCTCTCACACTTACAGTCCTCCTAGGCTTCTACTTTACTGCCCTA CAAGCCATAGAATACTACGAGGCCCCCTTTTCCATTGCCGATGGGGTATACGGCTCTACCTTCTTCGTAG CAACTGGATTTCACGGACTACACGTAATCATTGGTTCCACATTCCTCCTAGTATGCCTCCTACGTCTAAT TAAATACCACTTTACACCAAAACACCATTTTGGCTTCGAGGCAGCAGCTTGATACTGACACTTTGTGGAT GTCGTATGACTATTCCTTTATATGACTATCTACTGATGAGGATCTTACTCTTCTAGTATATTAATTACAA TCGACTTCCAATCCTTAAAATCTGGTTTAAACCCAGAGAAGAGTAATGAACATAATTCTATTCATAATCG CCTCATCCCTAACTTTAAGCATCATCCTCACTGCATTAAACTTCTGACTAGCACAGACAAACCCAGACTC CGAAAAGCTGTCCCCATACGAATGTGGATTTGACCCACTAGGGTCCGCCCGGCTGCCATTTTCAATTCGA TTCTTCCTAGTAGCGATCCTGTTCCTACTATTCGATCTAGAAATCGCCCTACTCCTCCCACTGCCATGGG CCATCCAACTACAAACCCCTACCACAACACTAACATGAGCCTCCATCCTCATCATCCTACTTACTCTGGG CCTAATCTATGAATGAAGCCAAGGAGGACTAGAATGGGCAGAATAACAGAAAGTTAGTCTAACCAAGACA GTTGATTTCGACTCAACAGATTATAGCTCACACCCTATAACTTTCTTAATGTCTGCCCTTCAATTAAGTT TCTTCTCCGCCTTCACCCTAAGCAGCCTAGGCTTAGCCTTCCACCGTACACACCTAATTTCTGCCTTACT ATGTTTAGAAAGCATAATACTATCCATATATGTAGCCCTTTCCATATGACCCATCCAAACTCAAACAGCA TCTGCCACCCTCCTTCCCCTTCTCATACTGGCATTCTCTGCCTGCGAGGCAGCAACAGGCCTAGCTCTAT TAGTCGCCTCCACCCGAACCCACGGTTCTGACCACTTACACAACTTCAACCTACTACAATGCTAAAAATC ATCATTCCAACTATTATACTCCTCCCACTAGCTTTCCTCTCTCCTCGTAAACACCTATGAACCAATACCA CAACACACAGCCTATTAATTGCCACTGTCAGCCTACAATGATTTGTCCCTACATACTACCCAAGCAAAGG ACTGACTCACTGAACTTCAATCGACCAAATCTCTTCTCCCCTTCTAGTCCTATCTTGCTGATTACTCCCT CTCATACTTATAGCAAGCCAAAACCATCTAGAACAAGAACCAACTACTCGCAAACGAGTCTTCATCGCAA CTCTAGTCACAGTACAACCATTCATCCTACTAGCTTTCTCAGCCTCAGAACTAATACTATTCTACATTGC ATTTGAAGCAACCCTAATTCCAACCCTAGTCCTCATCACACGCTGAGGAAACCAACCTGAACGACTAAAC GCAGGAATTTATCTACTATTTTACACACTTGCTAGCTCCCTTCCCCTATTAATCACAATCCTACACCTAC ATAACCAAATTGGCACATTATACTTCCCTATGCTCAAACTCTCGCACCCAACAATAAACAACTCCTGAAC AGGCTTAATCTCAAGTCTAGCCCTTCTACTGGCCTTTATGGTAAAAGCCCCCCTATATGGCTTACACCTA TGACTCCCAAAGGCACATGTAGAAGCCCCAATCGCTGGATCAATGCTACTAGCCGCCCTCCTCCTAAAAC TAGGGGGCTATGGCATTATACGAGTCACTATCCTAGTAAATCCCTCCGTAAATAACCTCCATTATCCATT CATTACCCTAGCATTATGAGGAGCATTAATAACTAGCGCTATTTGCCTACGACAAATTGACCTAAAATCC TTAATTGCCTACTCTTCTGTAAGCCACATAGGGTTAGTCATCGCCGCAACCATAATCCAGACCCAATGAG CCTTCTCAGGAGCAATAATCCTAATAATCTCCCACGGTCTAACCTCCTCAATACTATTCTGCCTAGCCAA TACTAACTATGAACGAACCCATAGCCGAATTCTTCTTCTCACTCGAGGCCTACAACCGCTTCTACCACTA ATAGGCACCTGATGACTTCTAGCAAATCTAACAAACATAGCATTACCACCAACAACCAACCTCATAGCAG AATTAACCATCGTGGTAGCCCTGTTCAATTGATCCCCTCTAACAATCATTCTAACAGGAACTACAATTGT CCTAACCGCCTCCTACACCCTTTACATACTAACAATAACACAACGAGGAATACTGCCATCCCATATCACC TCAATCCAAAACTCCTCCACACGAGAACATCTCCTAATAGCCTTACATATAATCCCCATGCTCCTACTTA TTCTCAAACCTGAACTTATCTCAGGAGTTCCCATATGCTAGTATAGTTTAATCAAAACATTAGATTGTGA TTCTAAAAATAGAAGTTAAACCCTTCTTACTTGCCGAGGGGAGGTTAAACCAACAAGAACTGCTAACTCT TGCATCTGAGTATAAAACCTCAGCCCCCTTACTTTCAAAGGATAATAGTAATCCAATGGTCTTAGGAACC AGTCATCTTGGTGCAAATCCAAGTGAAAGTAATGGACCAAATACTCATTCTGAACACATCCATACTACTC ACTCTAGCAGTCCTCTGCACCCCGATTATTTTCCCCCTCCTACCAAACAGCCTAAAAAACACTCCAACTA TCATTACAAATACTGTCAAAACTTCCTTCCTAATCAGCCTAATCCCCATAACCATCTACATCCACTCAGG AACAGAAAGTCTCACCACTCTTTGAGAATGAAAATTCATTATAAACTTTAAAATCCCTATCAGCCTGACA ATAGACTTTTACTCACTGACCTTCTTTCCAATTGCCCTATTCGTTTCCTGATCAATCCTACAATTTGCAA CATGATACATAGCCTCAGACCCCTACATTACAAAATTCTTCACCTTCCTCCTCCTATTCCTTATCGCCAT ACTTATCCTAATTGTCTCAAACAACCTATTCTTACTTTTCATTGGATGAGAAGGAGTCGGAATCATATCC TTCCTACTGATTAGCTGATGACATGGCCGAGCAGAAGCTAACACTGCTGCCCTACAAGCCGTATTATACA ATCGAGTCGGGGACGTAGGACTTATTATATGTATAGCATGACTGGCTTCTGCTATAAACACATGAGAAAT TCAACAAATCTCCTCTCAAGACCAAATCCCGACCCTTCCACTACTAGGCCTAATCCTAGCTGCAGCTGGT AAATCTGCCCAATTTGGCCTCCACCCATGACTCCCAGCTGCAATAGAAGGTCCAACCCCAGTATCTGCCC TACTACACTCCAGCACTATAGTAGTAGCCGGAATTTTCCTGCTAATCCGAACCCACCCCCTCTTTCACAA TAACCCTACCGTCCTCTCCCTGTGTCTATGCCTAGGAGCTCTCTCCACACTATTCGCAGCTACCTGTGCC CTAACCCAAAATGACATCAAAAAAATCATTGCTTTTTCCACATCCAGCCAGTTAGGCCTAATAATAGTTA CAATCGGCCTAAACCTTCCTCAACTAGCCTTCCTACACATTTCAACACATGCATTCTTTAAAGCCATACT ATTCCTATGCTCTGGGTCAATCATTCATAGCCTCAACGGTGAACAAGACATTCGAAAAATAGGAGGACTT CAAAAAATACTACCAACAACTACTTCATGCTTAACCATTGGAAACCTAGCCCTAATAGGAACCCCATTCC TAGCTGGATTCTACTCCAAAGACCAAATCATTGAGAGCCTCAATACCTCATATCTAAACGCCTGAGCTCT CGTCCTAACTCTCCTAGCTACATCATTTACTGCAGTTTATACTATTCGAATAACCCTACTAGTCCAAACC GGCCATGTCCGAATTCCACCCCTCACCCCCATAAACGAAAATAACCCAGCGGTCCTTTCCTCAATCACCC GCCTTGCACTAGGAAGTATCACAGCAGGATTCCTGATCACCTCATATATTCCACCTGCAAAAACCCCACC AATAACTATACCACTCTCTATTAAAATCACAGCCATCGTAGTCACACTCCTAGGAATTACCCTAGCCCTA GAGCTCTCAAAAATAACTCAAGCCTTAATCCTCCCTAAACAGAATCGCTTCTCAAATTTCTCTACAACCC TAGGATATTTTAATCCCCTAGTACACCGATTCATCACAACAAAACTTCTAAGCGGAGGTCAAAATATTGC TTCTCACCTAATTGACCTATCCTGATACAAGTTACTAGGCCCTGAAGGACTAGCCAACCTGCAAATAATA GCATCAAAAACCGCTACTACCTTCCACACAGGCCTGATCAAAGCCTATCTAGGGTCATTCGCCCTATCAA TCTTTATCATCCTCCTATCAACATACAGAACTAACCCAATGGCCCTAAATCTACGAAAAAACCACCCCCT ACTAAAAATCATCAACAACTCCCTAATTGACCTTCCTACTCCATCAAACATCTCAGCTTGATGAAACTTC GGATCCCTACTAGGTATTTGCCTCATCACACAAATCGTTACAGGCCTACTACTAGCCATACATTACACAG CAGATACTTCCCTAGCATTCACCTCCGTAGCTCACATATGCCGAAACGTACAATTTGGATGACTAATTCG CAATCTCCACGCAAATGGAGCCTCTCTCTTTTTCATCTGCATCTACCTCCACATTGGCCGAGGATTCTAC TACGGCTCATACCTAAATAAAGAAACCTGAAATATTGGAGTAATCCTTCTCCTGACATTAATAGCAACTG CTTTCGTAGGATACGTCCTACCCTGAGGACAAATATCCTTCTGAGGAGCCACAGTCATCACAAATCTCTT CTCAGCAATCCCATACATCGGACAAACACTAGTAGAGTGACTCTGAGGAGGATTCTCAGTAGACAACCCT ACATTAACCCGATTTTTCGCCTTTCACTTCCTCCTACCCTTCGTAATCGCAGGTCTAACACTAGTGCACC TAACCTTCCTGCACGAAACAGGCTCCAACAACCCACTAGGAATCCCCTCAGACTGCGACAAAATCCCATT CCACCCCTACTACTCCATCAAAGACCTACTAGGATTCGCACTAATACTCATCCTACTAGTCACCCTAGCG CTATTCTCCCCAAACCTCCTAGGAGACCCAGAAAATTTCACGCCCGCCAACCCCCTGGCTACCCCACCAC ATATTAAACCTGAATGATACTTCCTATTTGCATACGCTATCCTCCGATCTATTCCAAACAAACTAGGAGG AGTCCTAGCCCTAGCTGCCTCAGTCTTAGTTCTATTCTTAATCCCCCTACTCCATGTTTCCAAACAACGT TCCATAACCTTCCGACCTCTATCGCAAATCCTATTTTGAACTCTAGTCGCTGACCTCCTCATCCTAACAT GAGTAGGAAGCCAACCAGTCGAACACCCATTCATCATCATCGGCCAATTAGCCTCCTTCGCCTACTTCAC AATTATCCTAATCTTATTCCCCATTGTGAGCGCACTAGAAAACAAAATACTCAACCTCTAATCAACTCTA ATAGTTTATAAAAACATTGGTCTTGTAAGCCAAAGATTGAAGGCTAAACACCTTCTTAGAGTTTTTACAT AAAATCAGAAAGAAAGGAGTCAAACCTTTATCACCAACTCCCAAAGCTGGTATTTTCAACTAAACTACTC TCTGACTTACTAATTAAACCGCCCGAATTGCCCCCCGAGACAGCCCACGCACAAGCTCTAAAACCACAAA CAGTGTTAACAGTAGGCCTCATCCTGCAATTAAAAACAGCCCCGCCCCGAGCGAGTAAAACATAGCCACA CCGCTAAAATCTAACCGAACTCATGACAGACCCCCATTATTTACTGTATCTCCCCCCATAACTACCTCAG AAAATCCCCCCATAACAACCCCCACAACAACAACTGTTAGCACTATACCAGCACCATAACCAACAACCCG TCAATCACCCCAAGATTCAGGGTACGGGTCCGCCGCTAATGACACTGAATAGACAAACACCACTAACATC CCCCCTAGATAAACTATTACCAGTACTAAAGACACAAAAGAAACCCCCATACTTACCAGTCACCCACACC CCGCAATAGAAGCCACAACCAGACCCACCACCCCATAATAAGGAGAGGGATTAGACGCAACCGCTAACCC CCCTAGGACAAAGCATAAGCTCATAAACAGTACAAAATTTATCATAAGTTCCTACTTGGCTCCTCCCCAA GATCTATGGTCTGAAAAACCATTGTTATAAAATTTAACTACAGGAACTACAACCTCCCTTTCCCTTTCCC CCCCCCCCCCCCCCTACCCCCCCCATGTTTTTACATGGGTTTTTGGCTATGTATTTCTTTGCATACAATT CTCGTCCACATTAGACATAGAATGCATGTAGGATAACTCACATAACAAGTAATGCAAGACCTAACCAAAC TCAAATATCATCGCCCATAACAGCCCATACGGACAGATCCCCCTCCAGGCACATTCCCATTTCAGGTACA ATAAACCCAAGTGATCCTACCCGATGACACAAGACAAGCGTCACCCAAGATCGAGGATGTTTTACCTTAC ATACAAACCCACTCTGGTAAACGAGGAATATTCTAATACACCAATGAATTCTCAATCCCATACGTTTCAG TCCACCTCCTAGGCAAAATCCTAGTCCTATAGCCTTCAAGAGCTCCCAAGCAGGACCCGGTTATCTATTA GTCGTAGTTCTCACGAGAACCGAGCTACTCAACGTAGGTTCTACCCACAGCTACCAGCTTCAAGGCCATA CTTTCCCCCTACACCCTCGCCCAACTTGCGCTTTTGCGCCTCTGGTTCCTATTTCAGGGCCATAACTTGG TTCTTTCCCTCCTTATTGCTCTTCACAGACGCATATATGTTGGCTGCATACTCCTCCCTTTGCCTCGTGA TCGCGGCATCCGGCCGCCCTGGCACTTGTTTTCTTTTTGGGGTCTCTTCAATAAGCCCTTCAAGTGCGTA GCAGGAGATATCTTCCTCTTGACGTGTACATCACATGGCATCCGAGCGGTTTGTTGTCTGTAATGTCCCT GGTGTCATGGTTGTTCAGATAAGGTCGTCTCAAACTTGACACTGATGCACTTTTACCCCATTCATGGTGG GTCCCCCAGCTACCTATACGGTGGCAGATAATGTTATGGTTGCCGGACATAGTTTGTTATTTTTCCTTTA CTAGGAATTGTTACCTAAACTCTTATTTTTTCATCGTTCATTTTTATTTTGTTATTTTAACAAAATAAAC AACAATTTTTATATGATTTTAACCTAGATTGTCCAAACCATTTTCATTCGTTCGTTTGCATTAAACTTTC CTCTATATTTCCCCTATTTTCAATTCATCATATCAACAACTTTTATCATGACTTTTAACCAATTTATATG CAATAAAAAAATCAATTAATGCAATATAAAAATACACATCTTTTATTCATCATTATACACAATCTAAACC AAAAACCAATGCAACCACACCACAACCTCCACCTTTCCCCAAAACAAAAAACAAGATAAAAATACAAAAC ATTTACACCACTAACAAACTTAAAATTACTCACTC
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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