Viewing data for Pelomedusa subrufa
| Scientific name | Pelomedusa subrufa |
| Common name | Helmeted turtle |
| Maximum lifespan | 20.10 years (Pelomedusa subrufa@AnAge) |
| Total mtDNA (size: 16787 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6497 | 10290 | 4466 | 2031 | 4597 | 5693 |
| Base content per 1 kb (bases) | 387 | 613 | 266 | 121 | 274 | 339 |
| Base content (%) | 38.7% | 61.3% | ||||
| Total protein-coding genes (size: 11367 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4490 | 6877 | 3260 | 1230 | 3144 | 3733 |
| Base content per 1 kb (bases) | 395 | 605 | 287 | 108 | 277 | 328 |
| Base content (%) | 39.5% | 60.5% | ||||
| D-loop (size: 1194 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 326 | 868 | 223 | 103 | 416 | 452 |
| Base content per 1 kb (bases) | 273 | 727 | 187 | 86 | 348 | 379 |
| Base content (%) | 27.3% | 72.7% | ||||
| Total tRNA-coding genes (size: 1526 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 583 | 943 | 340 | 243 | 418 | 525 |
| Base content per 1 kb (bases) | 382 | 618 | 223 | 159 | 274 | 344 |
| Base content (%) | 38.2% | 61.8% | ||||
| Total rRNA-coding genes (size: 2572 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1053 | 1519 | 608 | 445 | 581 | 938 |
| Base content per 1 kb (bases) | 409 | 591 | 236 | 173 | 226 | 365 |
| Base content (%) | 40.9% | 59.1% | ||||
| 12S rRNA gene (size: 968 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 411 | 557 | 238 | 173 | 217 | 340 |
| Base content per 1 kb (bases) | 425 | 575 | 246 | 179 | 224 | 351 |
| Base content (%) | 42.5% | 57.5% | ||||
| 16S rRNA gene (size: 1604 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 642 | 962 | 370 | 272 | 364 | 598 |
| Base content per 1 kb (bases) | 400 | 600 | 231 | 170 | 227 | 373 |
| Base content (%) | 40.0% | 60.0% | ||||
| ATP6 (size: 687 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 255 | 432 | 204 | 51 | 207 | 225 |
| Base content per 1 kb (bases) | 371 | 629 | 297 | 74 | 301 | 328 |
| Base content (%) | 37.1% | 62.9% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 52 | 116 | 46 | 6 | 52 | 64 |
| Base content per 1 kb (bases) | 310 | 690 | 274 | 36 | 310 | 381 |
| Base content (%) | 31.0% | 69.0% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 633 | 912 | 406 | 227 | 449 | 463 |
| Base content per 1 kb (bases) | 410 | 590 | 263 | 147 | 291 | 300 |
| Base content (%) | 41.0% | 59.0% | ||||
| COX2 (size: 688 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 258 | 430 | 176 | 82 | 188 | 242 |
| Base content per 1 kb (bases) | 375 | 625 | 256 | 119 | 273 | 352 |
| Base content (%) | 37.5% | 62.5% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 314 | 470 | 215 | 99 | 229 | 241 |
| Base content per 1 kb (bases) | 401 | 599 | 274 | 126 | 292 | 307 |
| Base content (%) | 40.1% | 59.9% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 494 | 649 | 364 | 130 | 302 | 347 |
| Base content per 1 kb (bases) | 432 | 568 | 318 | 114 | 264 | 304 |
| Base content (%) | 43.2% | 56.8% | ||||
| ND1 (size: 968 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 382 | 586 | 270 | 112 | 298 | 288 |
| Base content per 1 kb (bases) | 395 | 605 | 279 | 116 | 308 | 298 |
| Base content (%) | 39.5% | 60.5% | ||||
| ND2 (size: 1040 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 398 | 642 | 294 | 104 | 284 | 358 |
| Base content per 1 kb (bases) | 383 | 617 | 283 | 100 | 273 | 344 |
| Base content (%) | 38.3% | 61.7% | ||||
| ND3 (size: 352 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 121 | 231 | 88 | 33 | 106 | 125 |
| Base content per 1 kb (bases) | 344 | 656 | 250 | 94 | 301 | 355 |
| Base content (%) | 34.4% | 65.6% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 537 | 841 | 405 | 132 | 383 | 458 |
| Base content per 1 kb (bases) | 390 | 610 | 294 | 96 | 278 | 332 |
| Base content (%) | 39.0% | 61.0% | ||||
| ND4L (size: 299 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 118 | 181 | 90 | 28 | 87 | 94 |
| Base content per 1 kb (bases) | 395 | 605 | 301 | 94 | 291 | 314 |
| Base content (%) | 39.5% | 60.5% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 716 | 1102 | 528 | 188 | 488 | 614 |
| Base content per 1 kb (bases) | 394 | 606 | 290 | 103 | 268 | 338 |
| Base content (%) | 39.4% | 60.6% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 216 | 306 | 176 | 40 | 79 | 227 |
| Base content per 1 kb (bases) | 414 | 586 | 337 | 77 | 151 | 435 |
| Base content (%) | 41.4% | 58.6% | ||||
| ATP6 (size: 687 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.07%) 
Alanine (Ala, A)
n = 13 (5.7%) 
Serine (Ser, S)
n = 20 (8.77%) 
Threonine (Thr, T)
n = 24 (10.53%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 4 (1.75%) 
Leucine (Leu, L)
n = 57 (25.0%) 
Isoleucine (Ile, I)
n = 20 (8.77%) 
Methionine (Met, M)
n = 16 (7.02%) 
Proline (Pro, P)
n = 15 (6.58%) 
Phenylalanine (Phe, F)
n = 9 (3.95%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 2 (0.88%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.75%) 
Asparagine (Asn, N)
n = 10 (4.39%) 
Glutamine (Gln, Q)
n = 8 (3.51%) 
Histidine (His, H)
n = 7 (3.07%) 
Lysine (Lys, K)
n = 4 (1.75%) 
Arginine (Arg, R)
n = 5 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 10 | 15 | 7 | 13 | 21 | 0 | 16 | 8 | 0 | 0 | 1 | 3 | 0 | 5 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 4 | 4 | 4 | 1 | 1 | 0 | 4 | 2 | 5 | 0 | 10 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 9 | 1 | 4 | 6 | 8 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 9 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 4 | 0 | 0 | 1 | 3 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 29 | 76 | 76 | 48 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 70 | 37 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 58 | 112 | 53 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPHPWFSIFITSWLILIIILLPKIKSHIPNNSPTNKKNMLTTPMPWTWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 6 (10.91%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 6 (10.91%)
Isoleucine (Ile, I)
n = 8 (14.55%)
Methionine (Met, M)
n = 3 (5.45%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 2 (3.64%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 1 (1.82%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 4 (7.27%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 3 | 3 | 1 | 1 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 7 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 0 | 16 | 26 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 19 | 13 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 11 | 25 | 19 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 42 (8.17%)
Alanine (Ala, A)
n = 41 (7.98%)
Serine (Ser, S)
n = 34 (6.61%)
Threonine (Thr, T)
n = 46 (8.95%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 33 (6.42%)
Leucine (Leu, L)
n = 60 (11.67%)
Isoleucine (Ile, I)
n = 42 (8.17%)
Methionine (Met, M)
n = 29 (5.64%)
Proline (Pro, P)
n = 27 (5.25%)
Phenylalanine (Phe, F)
n = 39 (7.59%)
Tyrosine (Tyr, Y)
n = 17 (3.31%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 12 (2.33%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 23 (4.47%)
Glutamine (Gln, Q)
n = 5 (0.97%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 8 (1.56%)
Arginine (Arg, R)
n = 9 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 19 | 23 | 29 | 13 | 8 | 23 | 1 | 15 | 4 | 1 | 7 | 8 | 13 | 5 | 15 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 0 | 5 | 20 | 16 | 0 | 8 | 6 | 22 | 6 | 4 | 3 | 19 | 1 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 22 | 0 | 7 | 9 | 12 | 1 | 3 | 2 | 8 | 9 | 0 | 0 | 9 | 14 | 12 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 9 | 0 | 6 | 6 | 8 | 0 | 2 | 2 | 5 | 0 | 1 | 0 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 137 | 106 | 154 | 118 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 143 | 94 | 203 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 157 | 215 | 128 | ||||||||||||
| COX2 (size: 688 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.07%)
Alanine (Ala, A)
n = 15 (6.58%)
Serine (Ser, S)
n = 13 (5.7%)
Threonine (Thr, T)
n = 17 (7.46%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.82%)
Leucine (Leu, L)
n = 29 (12.72%)
Isoleucine (Ile, I)
n = 22 (9.65%)
Methionine (Met, M)
n = 17 (7.46%)
Proline (Pro, P)
n = 12 (5.26%)
Phenylalanine (Phe, F)
n = 8 (3.51%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 11 (4.82%)
Glutamic acid (Glu, E)
n = 11 (4.82%)
Asparagine (Asn, N)
n = 9 (3.95%)
Glutamine (Gln, Q)
n = 11 (4.82%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 5 (2.19%)
Arginine (Arg, R)
n = 4 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 9 | 16 | 6 | 4 | 6 | 1 | 12 | 10 | 1 | 1 | 3 | 6 | 1 | 4 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 8 | 3 | 4 | 0 | 1 | 3 | 3 | 0 | 1 | 3 | 8 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 9 | 1 | 2 | 2 | 6 | 1 | 0 | 2 | 1 | 8 | 0 | 0 | 4 | 5 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 11 | 0 | 4 | 7 | 4 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 55 | 72 | 47 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 20 | 55 | 67 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 66 | 103 | 53 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (6.54%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 27 (10.38%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 10 (3.85%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 20 (7.69%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 9 (3.46%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 1 (0.38%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 9 | 10 | 8 | 2 | 14 | 0 | 11 | 8 | 1 | 2 | 2 | 6 | 0 | 7 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 0 | 2 | 6 | 8 | 0 | 4 | 3 | 9 | 1 | 4 | 2 | 6 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 11 | 0 | 2 | 3 | 6 | 1 | 1 | 6 | 5 | 5 | 0 | 0 | 1 | 8 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 0 | 2 | 1 | 1 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 65 | 74 | 68 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 67 | 55 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 83 | 112 | 63 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 21 (5.53%)
Serine (Ser, S)
n = 25 (6.58%)
Threonine (Thr, T)
n = 36 (9.47%)
Cysteine (Cys, C)
n = 2 (0.53%)
Valine (Val, V)
n = 11 (2.89%)
Leucine (Leu, L)
n = 63 (16.58%)
Isoleucine (Ile, I)
n = 35 (9.21%)
Methionine (Met, M)
n = 11 (2.89%)
Proline (Pro, P)
n = 24 (6.32%)
Phenylalanine (Phe, F)
n = 28 (7.37%)
Tyrosine (Tyr, Y)
n = 14 (3.68%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 8 (2.11%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 9 (2.37%)
Histidine (His, H)
n = 11 (2.89%)
Lysine (Lys, K)
n = 13 (3.42%)
Arginine (Arg, R)
n = 7 (1.84%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 32 | 11 | 7 | 14 | 21 | 3 | 18 | 7 | 2 | 1 | 4 | 5 | 1 | 9 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 1 | 6 | 12 | 3 | 0 | 2 | 6 | 16 | 1 | 4 | 7 | 13 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 12 | 3 | 5 | 8 | 10 | 0 | 2 | 0 | 2 | 12 | 0 | 0 | 8 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 3 | 2 | 0 | 8 | 13 | 0 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 1 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 96 | 118 | 97 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 47 | 104 | 82 | 148 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 164 | 147 | 57 | ||||||||||||
| ND1 (size: 968 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.98%)
Alanine (Ala, A)
n = 22 (6.85%)
Serine (Ser, S)
n = 32 (9.97%)
Threonine (Thr, T)
n = 26 (8.1%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 12 (3.74%)
Leucine (Leu, L)
n = 56 (17.45%)
Isoleucine (Ile, I)
n = 22 (6.85%)
Methionine (Met, M)
n = 22 (6.85%)
Proline (Pro, P)
n = 21 (6.54%)
Phenylalanine (Phe, F)
n = 24 (7.48%)
Tyrosine (Tyr, Y)
n = 10 (3.12%)
Tryptophan (Trp, W)
n = 9 (2.8%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 10 (3.12%)
Asparagine (Asn, N)
n = 11 (3.43%)
Glutamine (Gln, Q)
n = 7 (2.18%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 6 (1.87%)
Arginine (Arg, R)
n = 8 (2.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 9 | 21 | 10 | 8 | 19 | 3 | 16 | 7 | 0 | 2 | 3 | 7 | 0 | 11 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 4 | 9 | 9 | 0 | 4 | 2 | 7 | 3 | 7 | 2 | 12 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 8 | 0 | 6 | 10 | 12 | 0 | 0 | 4 | 5 | 5 | 0 | 0 | 2 | 9 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 10 | 0 | 0 | 4 | 4 | 2 | 1 | 2 | 5 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 78 | 91 | 89 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 97 | 50 | 136 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 95 | 146 | 72 | ||||||||||||
| ND2 (size: 1040 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 31 (8.99%)
Serine (Ser, S)
n = 23 (6.67%)
Threonine (Thr, T)
n = 41 (11.88%)
Cysteine (Cys, C)
n = 4 (1.16%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 57 (16.52%)
Isoleucine (Ile, I)
n = 31 (8.99%)
Methionine (Met, M)
n = 27 (7.83%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 14 (4.06%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 14 (4.06%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 10 (2.9%)
Arginine (Arg, R)
n = 6 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 23 | 27 | 7 | 6 | 20 | 2 | 21 | 13 | 1 | 0 | 1 | 4 | 2 | 4 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 4 | 0 | 6 | 13 | 12 | 0 | 1 | 2 | 7 | 3 | 4 | 5 | 10 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 16 | 0 | 4 | 7 | 10 | 0 | 0 | 2 | 7 | 7 | 1 | 1 | 4 | 11 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 4 | 0 | 3 | 0 | 10 | 0 | 1 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 78 | 126 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 112 | 64 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 104 | 167 | 65 | ||||||||||||
| ND3 (size: 1040 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 31 (8.99%)
Serine (Ser, S)
n = 23 (6.67%)
Threonine (Thr, T)
n = 41 (11.88%)
Cysteine (Cys, C)
n = 4 (1.16%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 57 (16.52%)
Isoleucine (Ile, I)
n = 31 (8.99%)
Methionine (Met, M)
n = 27 (7.83%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 14 (4.06%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 14 (4.06%)
Histidine (His, H)
n = 4 (1.16%)
Lysine (Lys, K)
n = 10 (2.9%)
Arginine (Arg, R)
n = 6 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 23 | 27 | 7 | 6 | 20 | 2 | 21 | 13 | 1 | 0 | 1 | 4 | 2 | 4 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 4 | 0 | 6 | 13 | 12 | 0 | 1 | 2 | 7 | 3 | 4 | 5 | 10 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 16 | 0 | 4 | 7 | 10 | 0 | 0 | 2 | 7 | 7 | 1 | 1 | 4 | 11 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 4 | 0 | 3 | 0 | 10 | 0 | 1 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 78 | 126 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 112 | 64 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 104 | 167 | 65 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.59%)
Alanine (Ala, A)
n = 24 (5.24%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 53 (11.57%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 8 (1.75%)
Leucine (Leu, L)
n = 95 (20.74%)
Isoleucine (Ile, I)
n = 41 (8.95%)
Methionine (Met, M)
n = 34 (7.42%)
Proline (Pro, P)
n = 26 (5.68%)
Phenylalanine (Phe, F)
n = 19 (4.15%)
Tyrosine (Tyr, Y)
n = 11 (2.4%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 16 (3.49%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 16 (3.49%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 27 | 33 | 8 | 16 | 33 | 5 | 32 | 10 | 0 | 1 | 2 | 5 | 0 | 9 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 3 | 15 | 5 | 1 | 2 | 7 | 10 | 2 | 5 | 5 | 16 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 23 | 20 | 1 | 2 | 12 | 14 | 1 | 2 | 6 | 6 | 5 | 1 | 1 | 8 | 8 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 0 | 0 | 2 | 11 | 1 | 0 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 123 | 164 | 108 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 132 | 76 | 197 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 150 | 218 | 77 | ||||||||||||
| ND4L (size: 299 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.02%)
Alanine (Ala, A)
n = 2 (2.04%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 13 (13.27%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 12 (12.24%)
Isoleucine (Ile, I)
n = 10 (10.2%)
Methionine (Met, M)
n = 1 (1.02%)
Proline (Pro, P)
n = 4 (4.08%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 7 (7.14%)
Tryptophan (Trp, W)
n = 2 (2.04%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 10 (10.2%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 5 | 1 | 5 | 1 | 5 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 3 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 3 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 2 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 3 | 1 | 1 | 2 | 1 | 0 | 2 | 3 | 1 | 6 | 1 | 1 | 2 | 4 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 2 | 2 | 2 | 2 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 27 | 41 | 26 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 23 | 30 | 30 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 40 | 21 | 31 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.3%)
Alanine (Ala, A)
n = 51 (8.43%)
Serine (Ser, S)
n = 48 (7.93%)
Threonine (Thr, T)
n = 60 (9.92%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 11 (1.82%)
Leucine (Leu, L)
n = 97 (16.03%)
Isoleucine (Ile, I)
n = 55 (9.09%)
Methionine (Met, M)
n = 45 (7.44%)
Proline (Pro, P)
n = 28 (4.63%)
Phenylalanine (Phe, F)
n = 37 (6.12%)
Tyrosine (Tyr, Y)
n = 19 (3.14%)
Tryptophan (Trp, W)
n = 10 (1.65%)
Aspartic acid (Asp, D)
n = 12 (1.98%)
Glutamic acid (Glu, E)
n = 12 (1.98%)
Asparagine (Asn, N)
n = 18 (2.98%)
Glutamine (Gln, Q)
n = 16 (2.64%)
Histidine (His, H)
n = 13 (2.15%)
Lysine (Lys, K)
n = 32 (5.29%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 26 | 41 | 15 | 20 | 45 | 1 | 15 | 15 | 1 | 0 | 6 | 4 | 1 | 11 | 26 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 2 | 4 | 8 | 25 | 17 | 1 | 5 | 6 | 14 | 1 | 5 | 6 | 16 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 28 | 26 | 0 | 9 | 11 | 17 | 0 | 3 | 8 | 8 | 11 | 0 | 1 | 5 | 13 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 11 | 1 | 5 | 7 | 31 | 1 | 0 | 1 | 7 | 1 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 112 | 147 | 221 | 126 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 62 | 176 | 123 | 245 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 205 | 270 | 117 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (15.03%)
Alanine (Ala, A)
n = 11 (6.36%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 4 (2.31%)
Valine (Val, V)
n = 30 (17.34%)
Leucine (Leu, L)
n = 23 (13.29%)
Isoleucine (Ile, I)
n = 9 (5.2%)
Methionine (Met, M)
n = 9 (5.2%)
Proline (Pro, P)
n = 3 (1.73%)
Phenylalanine (Phe, F)
n = 13 (7.51%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 6 (3.47%)
Aspartic acid (Asp, D)
n = 4 (2.31%)
Glutamic acid (Glu, E)
n = 3 (1.73%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 2 (1.16%)
Arginine (Arg, R)
n = 2 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 0 | 3 | 1 | 0 | 0 | 2 | 7 | 1 | 0 | 13 | 0 | 8 | 9 | 13 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 4 | 0 | 7 | 0 | 1 | 3 | 9 | 0 | 1 | 16 | 2 | 0 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 0 | 7 | 0 | 3 | 0 | 2 | 0 | 8 | 0 | 5 | 13 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 2 | 3 | 1 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 10 | 29 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 29 | 20 | 84 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 61 | 1 | 30 | 82 | ||||||||||||
| Total protein-coding genes (size: 11392 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 203 (5.35%)
Alanine (Ala, A)
n = 248 (6.54%)
Serine (Ser, S)
n = 288 (7.59%)
Threonine (Thr, T)
n = 373 (9.83%)
Cysteine (Cys, C)
n = 30 (0.79%)
Valine (Val, V)
n = 139 (3.66%)
Leucine (Leu, L)
n = 602 (15.87%)
Isoleucine (Ile, I)
n = 326 (8.59%)
Methionine (Met, M)
n = 233 (6.14%)
Proline (Pro, P)
n = 210 (5.54%)
Phenylalanine (Phe, F)
n = 222 (5.85%)
Tyrosine (Tyr, Y)
n = 128 (3.37%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 60 (1.58%)
Glutamic acid (Glu, E)
n = 77 (2.03%)
Asparagine (Asn, N)
n = 155 (4.09%)
Glutamine (Gln, Q)
n = 92 (2.43%)
Histidine (His, H)
n = 115 (3.03%)
Lysine (Lys, K)
n = 102 (2.69%)
Arginine (Arg, R)
n = 66 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 147 | 179 | 215 | 91 | 95 | 211 | 18 | 168 | 85 | 7 | 29 | 30 | 61 | 19 | 95 | 127 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 18 | 15 | 15 | 53 | 109 | 80 | 6 | 38 | 35 | 95 | 35 | 50 | 34 | 124 | 2 | 81 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 140 | 145 | 7 | 52 | 74 | 102 | 5 | 19 | 36 | 57 | 71 | 8 | 19 | 54 | 101 | 50 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 65 | 72 | 5 | 23 | 37 | 94 | 8 | 6 | 16 | 41 | 3 | 6 | 6 | 5 | 3 | 97 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 727 | 898 | 1256 | 913 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 471 | 1064 | 737 | 1522 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 169 | 1164 | 1601 | 860 | ||||||||||||
>NC_001947.1 Pelomedusa subrufa mitochondrion, complete genome GTTATTGTAGCTTATATTATTAAAGCATAGCACTGAAGATGCTAAGATAGATTAAATAAATCTCAAAAAC ACAAAGATTTGGTCCCAGTCTTACTGTTATTTTTTACTGAAATTACACATGCAAGTATCCGCGCCCCAGT GAGGAGTTAACCCAAAATTACTACTAAACATAGTAAAAGGAGTTGGTATCAGGCTCATCATAATAGCCCA AGACACCTAGCCATGCCACACCCACAAGGGATTTCAGCAGTGACAAATATTAAGCCATAAGCGAAAGCTC GACTTATTTACAGTAATACAGGGCTGGTAAACCTTGTGCCAGCAACCGCGGCTACACCAGGAGCCCAAAA CAACAGTCCTACGGCGTAAATTGTGGCTAAGACTAACAAAAAAATTAAGGTAGACCCTTCACTTCTTTGT AATAAGACCGCGTTCAAGTTATCCCATTGTAAAAACAACCTTAACCCTACCGCTTATCCGAACCCACGAT AGCTAAGACACAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCATGATATTTAACATAACAC AAATATCCGCCCGAGAACTACGAGCCTACAGCTTAAAACTTAAAGGACTTGGCGGTGTCCCATACCCAAC TAGAGGAGCCTGTTCTATAAGCGATTATCCACGATCAACCTTACCACCCTTTGCCATCCAGCCTATATAC CGCCGTCTAAAGCTCACCTTATGAAAGCTAAAAAGTAAGCAAAATAGCTACTACAGCTAGAAAGTCAGGT CCAGGTGTAGCCAATAGGGTGGATGTAATGGGCTACATTTTCTAAAATAGAAATATTCACGGACAGACCC TTGAAACAGGGACTAATAAGTTGGATTTAGCAGTAATCTAAGAATAGAAAGCCTATATTAAACCGGCCCT GGGACAAGCACACACCGCCCGTCACCTCCTCAATAAACTAATCAACCCCTTACATAAATTAACAAAACAT AAAAGAGAGGAGACAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGTACTTGGAATACCCAAAATATAGC TTACCTTAAAGCAGTCAGCTTACACCTGAACGATGTCCAAATGGACTATTTTGAGCAAGACATAAGCCCT ACTACTAATCTTCACCACCATAACAACCTCTTTACACCAAACCATTAAAACATTATATAAACTTAGTATA GGAGATAGAAAAGATTTTATTAGGAGCCCTAAAGACAGTACCGCAAGGGAAAGCTGAAAAATATGAAATA CTCACCAAGCCAAAAAAAGCAAAGATAAACCCTTGTACCTTTTGCATCATGATTTAGCCAGCATAACAGA GACAAAAAGAATTAAAGCCCCTCCCCCCGAAACCAGATGAGCTATTTAAAGGCAACTTTAGCAAAAGTTA CAATCCGTCTCTGTGGCAAAAGAGTGGAGAGACCCTTAAATAGAGGTGAAAAGCCAAACGAATCTAGTGA TAGCTGGTTGCTCAATAAAAGAATAATAGTTCTACCTTAAATCGCCCACCCCACATGCAGCACATATGCC CCTTGAGAAATTTAAGAGCTACTCAACCGAGGAACAGCCCGATTGAGAAGGGAAACAACCCACAATGGAG AACCAACTATGCAAAACTTAAATAGTAGGCCTTAAAGCAGCCATCACTTAAGATAGCGTTAAAGCTCATA TATCCAAAATATCAAAACCTTTGCCCATTCCCAAACACAATTGAGCTATTCTACTTACCTAGAAGAACCA ATGCTAAAATTAGTAACAAGAAAACTCTTCTCAACGCACTAGCTTACGTTAGTTCAGAAGAACTACTGAT TATTAACGAAATTATACCACAAAAACACTAAACAAAACATATAACAACTCAACCGTTAACCCAACACAGG AGTGCTGACCAGAAAGATTGAAATTTGTAAAAGGAATTAGGCAACTTAAGAGCCCGACTGTTTACCAAAA ACATAGCCACTAGCTCCCACAAGTATTAGAGGTAGTGCCTGCCCAGTGATTTATTAAACGGCCGCGGTAA CATGACCGCGCGAAGGTAGCATAATCACTTGTCTTTTAAATAGAGACTAGAATGAATGGCTACACGAGGT TCTATCTGTCTCTTACAAACAATCAGTGAAATTGATCTCCTCGTGCAAAAGCGAGAATAACCACATAAGA CGAGAAGACCCTGTGGAACTTCAAGTATTAACCAACATACTTCAAAGACCCGCCCGCCCTGTTAGGAAAG GAAATAAACACAGTATCCCATGGTTATCACTTTTGGTTGGGGCGACCTCGGAGAAAACAAAACCTCCGAA AAGAGTACATTCTCATACCTAGAATTACACCTCAAAGTGCTTTAAAGCAAAACGATCCAATATATTTGAT CAACGAACAAAGCTACCCCAGGGATAACAGCGCAATCCCTTCTCAAAGTCCCTATTAATGATGGGGGTTT ACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAACAGCTATTAAGGGTTCGTTTGTTCAACGATT AATAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCTATGCATGAATATTTT CCAGTACGAAAGGAACTAAAATATGCGACCCACAAGCCAAACACGTCGCACCCCTAATTTCTGTATTCAA CTAAATCAATACACAAGGGATCTAACACATCATACCTAAAGCAGGTAAATTGAGGTGGCAGAAGCCTGGT TAAATGTAAAAGGCCTAAGCCCTTTACTCAGGGGTTCAACTCCCCTCCTCATTAATATCTATTATAATAA ACCTACTGCAACCATTAGCATTTATTCTACCAATCCTTATTGCCGTATCCTTCTTTACCTTAGTTGAACG AAAAGTAATTAGCTGCATACAACCACGCAAAGGTCCAAACATTACCGGACCATTTGGTCTACTACAACCC TTAGCAGACGGCCTAAAGCTACTCTTTAAAGAACCTGTCTACCCAACCAACTCCTCCACCACCTTATTCA TCCTTACCCCTACCATAGCACTCTCATTAGCCCTCTCAACCTGACTACCTATACCCCTACCATTCTCACT AGTAGACCTAAACCTAGGCCTTTTATTCCTCCTTTCAATATCTAGCCTTATAGTATTCTCAATCCTTTGA TCTGGGTGAGCCTCTAACTCAAAGTATGCCTTAATAGGGGCCTTACGTGCAGTAGCCCAAACTATCTCCT ACGAAATTACCTTAAGCCTTATTCTACTTTCAATGGTTTTATTCTCAGGGGGATTTAATATACGAACATT CATAACAACACAAGAACAAATCTACCTAATCTTTTCTTCATGACCACTAGCAATAATATGATATATCTCC ACTCTGGCTGAAACTAACCGAGCTCCTTTTGACTTAGCAGAAGGAGAATCCGAACTAGTCTCAGGATTTA ATGTAGAATATGCAGGAGGTCCTTTCGCTGCATTCTTTATAGCAGAATATACTAGCATTCTCATAATAAA CACACTCTCCACCATTTTATTCTTAAACCCAGGTTTCATATACACTTCCCCAACCATTTTCTCTATCTCA CTTATAACAACAGCTGTAGCCCTTTCCATAGGATTTCTCTGAATTCGAGCCACTTACCCTCGCTTCCGAT ATGACCAATTAATACACCTGCTATGAAAAAACTTTTTACCAATTACACTAGCCTGATGCTTATGACATAT CTCACTACTCGTCACCACATCCGGAATTCCACCTATACTATAGGACACGTGCCCGAAAATTTAAGGCTCA CCTTGATGAGGTGAAAATAGAGACTAAAACCCTCTCGTTTCCTTAGAACAACAGGACTCGAACCCATCCC TTAGAAATCAAAATTGCTATGTATTTCCCCTATACTATGCTCTAGTAAAGTCAGCTAATCAAGCTTTTGG GCCCATACCCCAACAATGTCGGTTTAAATCCCTCCTGTGCTAATCAATCCATATGTACGCGCAATCATCA CCTCAGGATTAATCCTAGGTCCAATCATCACCATATCAAGCAACCATTGAATCACTGCCTGATGTGGCCT AGAAATAAATTCATTAACAATAATCCCCCTAATCGCTAACAAATACCAGCCTCGAGCAATCGAAGCATCC ACCAAATATTTCCTCACCCAAGCAATAGCATCATACCTTATATTATCAGCAGCCCTCATAAACATATGGT ACTATGGACAATGAGATATACAATTATTAACAGATAACATTTCATGTACCACCATAACTGTAGCTATATC CATTAAACTAGCAGCTGCCCCATTCCACTTTTGATTCCCCGAAGTACTTCAAGGAGCCACTGTATTAACA GCCTTACTTTTAACCACCTGACAAAAACTTGCCCCATTAACCATCTTAGTGCAATGTTCACAAAACTTAG ATACTACATTACTAATCGCACTAGGAATAACATCAATCTTAATCGGGGGCTGAGGGGGATTAAACCAAAC CCAAATTCGAAAAATCATAGCATTCTCTTCTATCGCCCATCTAGGATGAATATACGCCATTCTAACCCTC TCCCCAAAAATCTTATTATTGACATTTTACCTATATGTGGCTATAACAGCCACCACTTTCCTGATAATTA ACGTCCTACAAACAAATAATATATCTGCCATTATAATTTCATGAACAAAAACACCATTTATAAACACAAT AATATTACTCAACCTTATATCCCTAGCAGGACTACCTCCACTCACTGGGTTCGCACCAAAATGATTAATC TTACAAGAATTCACCAAACAACGTCTATCTATATTTGCTTCAATAATAATCACATCCTCCCTATTAAGCT TATATTTCTACCTTCGCATATCCTATTATACAATCATTACCCTTCCTCCAACCACTTGTAACTACCCCCT GCAATGACGACTAATAACAAACATCCATACTGCTCTAGCAACAATCACCCCTCTAGCCACTGCCCTAATA CCACTACTCCCCACACTAAAAGCCATCCCCTAAGGAACTTAGGATCAGCAACCTCAATCCAGAAGCCTTC AAAGCCTCAGACAAGAGACTAAACCTCTTAGTTTCTGATAAGGCCTATAGGATTTTATCCTATATCAACT GAATGCAACTCAGACGCTTTCATTAGGCTAAAGTCTTCCTAGATAAATGGGCTTTGATCCCATAAATAAT TAGTTAACAGCTAACTACCCTATTCAACTGGCTTTTATCTATTTAGGCCACGGTGCCTAAATTAAACAGC ACTTCTTCAGACTTGCAACCTGACATGATATTCACCACAAAGCCATAGTAAGAAGAGGGATTAAACCTCT ATAAAAAGGTTTACAACCTAACACCTGAACACTCGGTCATCTCACTTGTGAACTTAAACCGCTGACTATT CTCTACTAACCATAAAGACATTGGTACCCTTTATCTAATCTTCGGGGCCTGAGCAGGAATAATTGGTACC GCCCTTAGTCTCCTAATTCGAACTGAACTTAATCAGCCAGGAAACCTCCTCGGTAGCGATCAAACCTATA ACGTCATTGTCACAGCCCATGCATTCGTCATAATCTTCTTTATAGTTATACCTGTTATAATTGGAGGATT CGGAAATTGATTAGTACCTCTAATAATCGGAGCCCCAGATATAGCATTTCCGCGTCTAAATAATATAAGC TTCTGACTTTTACCTCCATCCCTCCTTCTTATACTTGCTTCATCTGCAATTGAAGCCGGAGCAGGAACAG GTTGAACAGTTTATCCCCCATTAGCAAGTAACCTAGCCCACGCCGGTGCATCCGTAGACCTAGCTATCTT TTCCCTACATTTAGCAGGGGCATCCTCCATCTTAGGGGCCATCAACTTTATCACTACAGTGATTAATATA AAAACCCCAAACATATCTTTTCTAGACATACCATTATTTGTCTGATCCGTACTAATCACAGCCATCTTAC TACTATTATCCCTTCCAGTGCTCGCAGCAGGAATTACCATACTTTTAACAGATCGAAACTTAAACACAAC CTTCTTCGACCCATCAGGAGGAGGGGACCCAATCCTATATCAACACCTGTTCTGATTCTTTGGTCATCCA GAAGTATATATTCTCATCCTACCAGGATTTGGCATCATTTCACATATTGTCGCCTACTACTCAACAAAAA AAGAACCATTCGGTTACATTGGAATAGTTTGAGCAATAACATCAATTGGATTCCTAGGTTTTATTGTTTG AGCACACCATATATTCACTGTGGGAATAAATGTAAATACACGAGCCTATTTCACATCAGCAACAATAATC ATCGCTATCCCAACTGGCGTAAAAGTATTTAACTGACTCGCCACCATCCATGGAGGACTAATCAAATGAG AAGCCCCTATACTATGAGCCTTTGGCTTTATCTTCCTATTCACTGTGGGAGGACTTACTGGAATCGTACT TGCCAACTCATCATTAGATATTGTCCTACACGACACCTATTACGTAGTAGCCCACTTCCATTACGTTCTT TCTATAGGCGCCGTCTTCGCCATCATAGCAGGGTTTACCCATTGATTTACCCTCTTCACAGGCTACCCAT TACACTCAACATGAACAAAAATTCATTTCACAACAATATTCATTGGGGTAAATTTAACCTTCTTCCCACA ACATTTCCTAGGATTAGCTGGAATACCCCGACGTTATTCTGATTACCCAGATGCCTACACCCTATGAAAC TCTATCTCATCAATAGGCTCCATAATCTCCCTTACAGCAGTTGTCATAATAACATTTATTATCTGAGAAG CCATATCGTCAAAACGAAGTACCACTACAACCGAACAAATATCTACTAATGTAGAATGAACCTACCTATG TCCACCCCCAAACCACACACATGTAGAAGCTACACACCTAATTCGCCCAAGAAAGGAAGGAATCGAACCC CCTTAAAATGGTTTCAAGCCAACCGCATAACCACTATGCTACCTTCTTAAAGACGTTAGTAAAACATTAC ATATCCTTGTCAAGGCTAAATTATAGGTGAAAACCCTTTACGACTTGAATGCCAACCCCAAACCAAACAA ATTTCCAAGATGCTGCTTCTCCACTTATAGAAGAACTTACCCACTTCCACGACCACACATTAATAATTGT ATTTATAATCAGCTTATTAGTATTATACATTCTCCTATCGATATTATCTACAAAACTTACACACACAAAC ACTGCAAATGCCCAACAAGCCGAAATAGTATGAACTATTCTCCCTGCTATTATTCTAATCACTATTGCAC TCCCATCATTACAAATCCTTTACATAATAGATGAAATTAACAAGCCCCATATAACAATTAAAGCTATCGG CCACCAATGATATTGAACCTACGAATACACAGACTACAAAGAACTAGAATTTAATTCATACATAATCCAA ACACAAGATCTCCCCTTAGGCCACATACGACTACTTGAAGTAGACCATCGAATAGTAACACCCTTAGAAT CCTACATCCGAATATTAATTTCAGCTGACGATGTTTTACACTCATGAGCAATCCCATCACTGGGACTAAA AACTGACGCTGTCCCAGGACGCATTAATCAAGCAGTCTTTATTATTATACAAGCCGGTATTTTCTACGGC CAGTGCTCAGAAATCTGTGGAGCTAACCATAGCTTTATACCAGTCGTAGTGGAATCCCTACCAATAAACC ACTTCGACCTTTGATTAGCTATAATCGACACGTTATCACTAAAGGAGCTTAATGTATACAGCGCTAGACT TTTAATCTAGAAAAGAGTGTGAACACTCCTTAGTGATATACCACAATTAAACCCACACCCATGATTTTCT ATCTTCATTACTTCCTGATTGATTCTCATTATCATTCTTCTACCAAAAATCAAATCCCATATTCCAAATA ATTCTCCCACTAATAAAAAAAATATACTAACAACTCCAATACCTTGAACCTGACCATGAACTTAACTCTC TTTGACCAATTCTCATCTCCAAACATTCTAGCTATTCCACTTATAACAATCTCCCTACTCATACTAACAA TTATTTTTCCAATAAAACACAACCGACTACTCACAAACCGATTACTATCTATTCAATCAAAAATAATCCA TATTTTCACAAAACAACTTATATTACCAATTCCTAAGTCAGGACATCATTGAGCCTTAATTTTAACATCC TTAATAACCCTCCTCCTAACCTCCAACCTACTCGGATTACTACCTTATACATTTACCCCTACTACTCAAC TTTCCATAAACCTAGGATTTGCCCTCCCAATATGATTAGCTACACTACTAATTGGGCTCCGAAACCAACC AACTATATCACTTGCACATCTTCTACCAGAAGGAACCCCAACCCCTCTAATCCCAACACTTATCCTTATC GAATCTATCAGTTTAATAATCCGCCCTCTCGCACTAGGGGTCCGAATTTCAGCTAACTTAACGGCTGGTC ACCTACTAATACAACTCACTTCCTCTGCCACATTATCATTATCATCAATACCAACTCTCTCCTTTATAAC TGCGATCCTATTATTCCTACTCACTATCTTAGAAATAGCAGTAGCCATAATCCAAGCATTAGTATTCGTA CTACTCCTAAGCCTATATTTACAAGAAAATACCCATAACTAACCAACTACATCCTTTCCATATAACCAAC CCAAGCCCATGACCTTTAACAGGTGCAACAGCAGCCCTACTTATAACCTCGGGATTAATCATATGATTTC ACTACAACAGCAGTCAACTTATTATATTAGGACTATTAATCATACTTCTTACCCTCACTCAGTGATGACG TGATATCGTACGAGAAAGCACATTCCAAGGTCACCATACCCCCTCAGTTCAAAATAACTTACGCTATGGC ATAATCCTATTTATTACATCTGAAATCCTATTCTTCACAGGGTTCTTCTGAGCATTCTACCACTCAAGCT TATCTCCAACAGCAGAATTAGGAAACATCTGACCTCCAACAGGAATTACCCCTCTTAACCCATTTGAAGT CCCCCTACTAAACACTGCCGTACTTCTCGCCTCAGGAGTAACTATTACTTGAGCTCACCACAGCCTAATA GAAGGAAACCGACCACAAACCCTACAAGCACTTACCTTAACTATTATTCTAGGTACCTACTTCACTATCC TACAAGCAATAGAATATTTCGAAGCTTCCTTCACAATCGCCGACAGCATTTACGGTTCCACATTCTTTGT AGCCACAGGATTTCACGGACTACATGTAATTATTGGCTCAACATTCCTAATTGTTTGTTTAATACGCCAA CTTAAATACCACTTCACCTCACATCACCACTTCGGATTTGAAGCAGCCGCATGATATTGACACTTTGTAG ATGTCATCTGATTATTCCTATATTTATCCATTTATTGATGAGGCTCATATTCTTCTAGTATATTAGTACA AATGACTTCCAATCATTTAGTTTCAGAATCCACTGAAGAAGGATAATTAACACATTAATAACAACTATAT TATTAACCACAACACTCTCAATCATCATAATAGCACTAAACTACACAATTACTAATAAAAACCCACACCA CGAAAAAATATCACCATATGAATGCGGATTCAACCCACTTAGAACCAGCTTGATTACCATTCTCAGTTCG ATTTTTCCTTATCGCAATCTTATTTCTCCTATTTGATTTAGAAATTGCATTACTCCTTCCACTACCATGA GCCCTTCAACTTCCATCACCAACAATAGTCCTAATATGAACCTTTATCCTTATTACACTACTTACGGTAG GTTTCATCTATGAATGAGTCCAAGGAGGACTAGAATGACCAAATTAGGTATCTAGTCTAAAACAAGACTA CTAGTTTCGACTTAGAAAATCATGAACATAACCATGGTTACCTTGTATTCCACACTACCACCTTATTTTC CTTATTTCCTTTCTAATCAGCCTAACAGGATTTGCCTACCACCAAAAATACCTAATCTCAACCCTACTAG CCCTTAGAAGGCATAACACTCACCCTGTTCACCGCAGTATCAACAGAAGCCCTACAACTACAAACACCAC CCTTCACCATTCCTGCCATTTTAATACTTGCATTCTCTGCTTGTGACACTAGTACAGGCTTATCTCTACT AGTAGCTACATCACGAACCCATGGACTTAGATATATTAAAAAACCTAAATTTACTTCAATGTTAAAATTA CTTCTACCTATAATTATATTACTACCTACTTCCTGATTATGTAAAAAAAATCACCTCTCATACACAACCC TCCTATTCAGCTTCACCATCGCCCTCTTAAGTCTACAATGACTTAAGCCCCCATTTGAATTAACAACCAC TTTCTCCAATACATATATAGGAGTAGACCCAATCTCAACCCCATTACTTATTTTAACCTCCTGAATAACC CCATTAATAATCCTAGTTAGCAAAAACCATTTAATTCAAGAACCCCTGTCACGCAAACGAACTTTTACAA CAACTATCATCTCCTTACAAATCTCATTAACCCTGGCATTCTCGGCCCTGGAAATAATATTGTTTTTTAC AATATTTGAAGCCACCCTAATCCCCACCTTAATTATCATCACACGATGAGGAAATCAAATAGAACGACTA AGCGCTGGTACCTATTTCCTATTTTACACCCTAATCGGCTCTCTCCCACTCCTAATTGCCCTCACCTCAT TACACACTAATTATAATACACTCTCCCTATTTATCCTACAATTAAATCCACCTAACCTTACAAACTCCTG AGCCCACACAATATGATGATTTGCCTTACTAATAGCATTCATAATCAAAATACCACTTTATGGTTTACAC CTATGACTCCCAAAAGCGCATGTAGAAGCCCCAATCGCAGGCTCCATAATCCTAGCCGGAGTCTTATTAA AACTAGGAGGATACGGAATTATCCGAGTAACTTTAATACTCAATCCACTAACAAAATCACTCAGCTATCC ATTCATAACCCTCTCCCTGTGAGGCATTATCATAACCGGCTTAATCTGCCTACGACAAACAGACCTAAAA TCACTAATTGCCTACTCCTCAGTAGGCCTCATAGGCCTAGTAATCTCTGCAGCCCTTCTACAAACCCCAT TATCAATCACAGGAGCTATTATCCTAATAATTGCTCATGGGTTATCATCATCCATACTCTTCTGCCTAGC CAACACAAACTATGAACGAACCCACAACCGAACCTTACTACTGACACATAGTATACAAACCCTATTACCT CTAATAACCATTTGGTGATTACTAGCCAGCTTAATAAACATAGCCTTACCCCCTACAATCAACCTTATAG GAGAACTAACAATTATCGCATCATTATTTAGCTGAGCCAATATCACTATCATCCTAACCGGGTTAGGAAC ACTAATCTCAGCCCTCTACTCCCTCCATATATTCTCAACCACACAATGAGGCGGAACTCCACCACACCAT ATACACACTATTACCCCATCCCACACACGAGAACATTTAATCATAATACTCCACATAGTCCCCCTAATTC TATTAATAATAAAACCACAACTTATAACGACCTTCTGTTAATATAGTTTCAATAAAACATTAGAATGTGA ACCTAAAAATAGAGGTTCAAACCCTCTTACTAACCGAGGAAGAAAGTAAGAAACCGCTAACTTCTAACCC TGAAACTAACACTTCAGCTTCCCCACTTTCAAAGGATAGAAGTTATCCAATGGCTTTAGGGGCCATCTTC CCTTGGTGCAACTCCAAGTGAGAGTAACATGCCAAACCTACAACTCATTCTAAAAACAATCCTCATCACC GAACTCCTAATCCTAGCTTTATCAGCGCTAATAACAATACTCCCGCCCATTCTTAACAAACTTACTTGAG ACCCAGAAAAAGCCATAACCACAACCTTCCGATTATCACTAACTTCAATTCTCATCCATATTTTAATCGA AGAGCCTTCATCAATTTCATCCCTTTATTCACCCACCATACTTAACCTAGCCATAAGCATTAAAATTGAC TACTACTCCCTAATTTTTATTTCAATTGCCCTATTCATCACCCGAGCCATCTTACAGTATACAAAATGAT ATATAGCATCAGACCGGGATCTAAAAAAGTTCTCCATGTTCCTTCTCCTATTCCTAATATCAATAATTAT ATTCATCGCAGCCAACAACTTTTTCCCAATACTAGTCGGTTGAGGAACCATAGGATTAATATCTTACCTC CTTATCTCCTGATGACATGGACGAACAGAAGCTACCACATCTGGACTTCAAGCCATTTTATATAACCGAC TTGCTGACATCGGATTTATCCTCACTTTTTCATGATGCATTACTTATATGTCTTCCCTTGACCTAAATAC ATTCTTCGCCACATCCACACTAGTGACAGGAGTCCCAATCCTAGGTATACTAATAGCAGCCATAGGAAAA TCAGCCCAATTCGGAATACATCCATGACTCCCAGCCGCCATAGAAGGCCCAACACCAGTCTCAGCCCTAC TACACTCTAGCACAATGGTAACCGCTGGAGTCTACCTCCTCATTGGAATACACCCCATCCTATCACAAAC CCAAGGCTTCAGCGAAGCCTGTTTAACCATAGGAGCTGCCACCGCCCTATACGCCTCCTTTAAAGCTCTA CTACAAAACGATCTCAAAAAAATTATTGCCTTTTCCACACTAAGCCAACTAGGCTTCATAATAGCCACCG TCGGCCTAAATCACCCTAACCTAGCCTTCATACATCTTTGCATACACGCCTTCTTTAAAGCAATAATATT TCTATGTGCAGGTTCCATCTCCCACGCTCTGTTCGGAGAACAAGATATCCGAAAAATAAGTGGTATAATT AAAGTAACCCCTATTACAGCCTCTTGCTTCACCCTATCTACCTTAGCCCTCGCAGGGTTCCCATTCCTAA CAGGATTCTTTTCTAAAGACCTTATTATTGAAACAATCCTCCTCTCAAAAATCAATATACTCTGAGCAAC CATACTACTTATTTCAACCATATTCACAGCAATCTATAGCCTACGAATAACACTTCGAATCCTCACAGGC ACCCCATGATACAACGATCTATTAACATACGAAGAAAACCCCACATGCACAAAACCAATTATAAAACTAG CCTTAGCAAGCATTGTCACCGGATCCCTATTCTCATTATTCACCCCACCAATTTACACCCCTTTACAAAC TATACCCCCTACCATCAAACTAGCAGCATTGACCCTCACCTTCATAAGCGCATTCTTAGCAATATACCTA ATTAGTCTAGCTAATAATAAACCCCTTCCAAAAAACACCATCCAAAACCACATATTACAAACAGCAAAAG ATCTAAAAATTATCACCCACCGCCATCTAATAGCAAAACTACTAAAAGCAAGTCAAAAAACAGCCCTCCA AATCTTAGACAACCATTGAAAACTCAAAGCAGGTCCAAAATACATCGAAAAAACTCAAATCCCAATATCT ATAAAAACATCTACACAAAGCGGCCTTATTAAAACCTATTTTATAGCCTTCCTAGTAACCTTTGTAATTA TTCTATATATCATACTATTCTACTAACCATCCCACATGTTTCCTAAAAGCACCTGTCTAATGGTTTCACC CAACCATCAAAGTAGATCACTTCTATTAGAAATTAAAGATCACAAAAATACGCCTGAGTCATACCCTACT TATTAATAAGCCTAATAGTTGGACAAGCTACCCGAAACAACCCTTGAACCAGCACTAAAACAATAAAAAA AGTCAAAAACAGCCCAAACATAGCCATTATCAATGCCCCACCCCCAATAGCATACAACAAAGACAACCCT GAAGAATCAACCCGAACAATAGACAACCCCCCAGCATCAACCACCCCGTCACCACATTCACCAACCCCCC ATCAACCCCAACCAACCAACACAAAAACCACCGCTAACACCACATACTTACCCGCATGTATCACCCCAAC CCAATCCCCCATTACCTCAGGAAAAGGCTCCATTACCAATGTAATAGAATAAGCAAAAATAACCAACATA CCCCCAAGATAAATTAAAAATAATACTAAAGCCAAAAAAGAACCCCCCTTCCAAGCTAATACTACACACC CTGTTCCCGCTGTACACACCAAACTTACAACACCATAATAAACTGAAATATTTGAAGACACCCCAATCAA CCAAAATACATAACTAAACCCAAATAACATAGAAACATATATCACAATACCTATTTGGACTTTAACCTAA ACCTCTGATATGAAAAACCAACGTTGCATTCAACTATAGGTACACTGCACTTAAAACAGAACCCACTCCT AAAAATCACCAACAAATCACTCATCAACCTCCCAAGTCCCTCCAACATCTCAGCATGATGAAACTTTGGC TCACTACTAGGAATATGCCTGATCTTACAAATCACCACAGGTATTTTCTTAGCTATACACTACACACCAA ACATCACCACCGCCTTCTCATCAGTCGCTCACATCACTCGTGACGTCCAATACGGCTGACTCCTCCGAGG CTTACACGCCAATGGAGCCTCCATCTTTTTCATCTGTCTCTATTTTCATATTGGACGCGGAATTTACTAC GGATCTTTCCTCAATAAAAAAACCTGATACACGGGCATCATACTCCTATTCTTAACAATAGCCACAGCCT TTATAGGATACATCCTACCATGAGGACAAATATCTTTCTGAGGCGCCACGGTAATCACTAACCTCCTATC TGCCATCCCCTATATAGGAACCAACTTAGTCCAGTGAATCTGAGGAGGATTTTCAGTAGACAATGCAACC CTAACCCGATTCTTCACCCTACACTTCTTAACCCCATTCATCATCTCAAGTCTTACCACAATCCATCTAT TACTCCTCCACGAAAAAGGATCTAACAATCCAACAGGACTTAACTCCAACCCTGACAAAATCCCATTTCA CCCCTACTTTTCATACAAAGACCTTTTAGGAGTAAATCTACTTATAATCGGACTATTAACCCTAACCTTA TTCCTACCTAACCTGCTAACAGACCCAGAGAATTTCACCCCAGCTAATCCCCTATCTACACCTAAACACA TCAAACCAGAGTGATACTTCCTCTTTGCCTACGCTATCTTACGCTCCATCCCCAATAAATTAGGCGGAGT ATTAGCCCTACTATCCTCAGTGACTATCCTCTTCATCATACCCACGCTACACACCTCCAAACAACGATCA GCTACCTTCCGACCTTTCACACAAATCCTATTCTGATCCCCAACTGCCGACTTAGTTATCCTCACCTGAA TCGGGGCCCAACCCGTAGAAGACCCATTCATCATAATCGGACAAACAGCCTCCGTCTTCTACTTTACATT AATCCTTCTATTAATCCCATTAGCAGCTATCCTTGAAAACAAACTTCTAGACTACTAGCATTTCAGTAGT TTATCCAAAACCTTGGCCTTGTAAACCAAAAATGGCAAATCAGTTGCCCTGAAATATCAAAAAAAGGAGT AGACCCCCTGTCACCAACTCCCAAAGCTGGTATTTTCACTAAACTATTTTTTGCCAAAAAAAGAACAGTA AATCGCCTACATCGCCACCACGTCTCCAGCTATCCCCCCCTACCCCCCCGTAGGGGATTTTTGGCTATGT ACGTCGTGCATTCATTTTTTTGCCCCATGCATATCATTGTATACATTAATTTCATGGTCACAGGACAATG TACATTAATTCCATGATTTAGGACATACTATTAAATAATTCTTTTCCTCATGAATATTGCCACAGTACTT GGCTATTTCTTGATTCAGCTACTCACGTGAACATGACATTCCCTGTTATATAGGCACACGGTCCCCAGCT TCTACGTCCATCATTTTAATTCGTACCTTATATGATCTTCAGGATACCTCTGGCTGTTTTTTCAGGAACT TACATCTAAGACGGGCATCGATCGTTCTTCAGGATACCTCTCGTTGCATTTTTAGTCAGTGAGTTCTATA CACACGTTCAAATAACAAGACATCATTCACTTCCAGGCATATAGTACTCTTTTTATTTTTATCTCGCCTT CACAATGACACCTATTATGGTCTCTCTCAATTCTCTGAAACTCTGGGCCTTATGTAAGTTATTTACCGAA CAACAAACCTTGTCGCGTTGGCTTATTAATTAATGCTCACAGGACATAACACTTTTGTGTAAAACTCAAT AGGAAAATTTCCATTCGTTTTTACACTACTTATTAACATTATTACACAAACATATATACAAACAAAGTAC TAATTATACTAATCATATAAATATATATATATATATATATACAAACATATATACAAACAAAGTACTAATT ATACTAATCATATAAATATATATATATATATATATATACAAACATATATACAAACAAAGTACTAATTATA CTAATCCATATAAATATATATATATATATATATATACAAACATATATACAAACAAAGTACTAATTATACT AATCATATAAATATATATATATATATATATACAAACATATATACAAACAAAGTACTAATTATACTAATCA TATAAATATATATATATATATATATATACAAACATATATACAAACAAAGTACTAATTATACTAATCATAT AAATATATATACATATAATATATATATAATATATATATAATATATATATAATATATATAATATATATATA ATATATATATTACAAATATCTCTACTCTTAATCCAAATAAATTTTTCACATATACAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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