Viewing data for Rattus fuscipes
| Scientific name | Rattus fuscipes |
| Common name | Bush rat |
| Maximum lifespan | 5.30 years (Rattus fuscipes@AnAge) |
| Total mtDNA (size: 16301 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6348 | 9953 | 4321 | 2027 | 4415 | 5538 |
| Base content per 1 kb (bases) | 389 | 611 | 265 | 124 | 271 | 340 |
| Base content (%) | 38.9% | 61.1% | ||||
| Total protein-coding genes (size: 11333 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4534 | 6799 | 3257 | 1277 | 3108 | 3691 |
| Base content per 1 kb (bases) | 400 | 600 | 287 | 113 | 274 | 326 |
| Base content (%) | 40.0% | 60.0% | ||||
| D-loop (size: 876 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 308 | 568 | 210 | 98 | 261 | 307 |
| Base content per 1 kb (bases) | 352 | 648 | 240 | 112 | 298 | 350 |
| Base content (%) | 35.2% | 64.8% | ||||
| Total tRNA-coding genes (size: 1496 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 527 | 969 | 302 | 225 | 415 | 554 |
| Base content per 1 kb (bases) | 352 | 648 | 202 | 150 | 277 | 370 |
| Base content (%) | 35.2% | 64.8% | ||||
| Total rRNA-coding genes (size: 2524 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 949 | 1575 | 531 | 418 | 612 | 963 |
| Base content per 1 kb (bases) | 376 | 624 | 210 | 166 | 242 | 382 |
| Base content (%) | 37.6% | 62.4% | ||||
| 12S rRNA gene (size: 961 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 368 | 593 | 212 | 156 | 233 | 360 |
| Base content per 1 kb (bases) | 383 | 617 | 221 | 162 | 242 | 375 |
| Base content (%) | 38.3% | 61.7% | ||||
| 16S rRNA gene (size: 1563 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 581 | 982 | 319 | 262 | 379 | 603 |
| Base content per 1 kb (bases) | 372 | 628 | 204 | 168 | 242 | 386 |
| Base content (%) | 37.2% | 62.8% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 271 | 410 | 197 | 74 | 190 | 220 |
| Base content per 1 kb (bases) | 398 | 602 | 289 | 109 | 279 | 323 |
| Base content (%) | 39.8% | 60.2% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 70 | 134 | 56 | 14 | 59 | 75 |
| Base content per 1 kb (bases) | 343 | 657 | 275 | 69 | 289 | 368 |
| Base content (%) | 34.3% | 65.7% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 627 | 918 | 382 | 245 | 473 | 445 |
| Base content per 1 kb (bases) | 406 | 594 | 247 | 159 | 306 | 288 |
| Base content (%) | 40.6% | 59.4% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 275 | 409 | 187 | 88 | 180 | 229 |
| Base content per 1 kb (bases) | 402 | 598 | 273 | 129 | 263 | 335 |
| Base content (%) | 40.2% | 59.8% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 325 | 459 | 219 | 106 | 226 | 233 |
| Base content per 1 kb (bases) | 415 | 585 | 279 | 135 | 288 | 297 |
| Base content (%) | 41.5% | 58.5% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 504 | 639 | 355 | 149 | 301 | 338 |
| Base content per 1 kb (bases) | 441 | 559 | 311 | 130 | 263 | 296 |
| Base content (%) | 44.1% | 55.9% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 403 | 552 | 288 | 115 | 272 | 280 |
| Base content per 1 kb (bases) | 422 | 578 | 302 | 120 | 285 | 293 |
| Base content (%) | 42.2% | 57.8% | ||||
| ND2 (size: 1036 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 394 | 642 | 310 | 84 | 265 | 377 |
| Base content per 1 kb (bases) | 380 | 620 | 299 | 81 | 256 | 364 |
| Base content (%) | 38.0% | 62.0% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 124 | 224 | 91 | 33 | 107 | 117 |
| Base content per 1 kb (bases) | 356 | 644 | 261 | 95 | 307 | 336 |
| Base content (%) | 35.6% | 64.4% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 539 | 839 | 409 | 130 | 366 | 473 |
| Base content per 1 kb (bases) | 391 | 609 | 297 | 94 | 266 | 343 |
| Base content (%) | 39.1% | 60.9% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 120 | 177 | 91 | 29 | 87 | 90 |
| Base content per 1 kb (bases) | 404 | 596 | 306 | 98 | 293 | 303 |
| Base content (%) | 40.4% | 59.6% | ||||
| ND5 (size: 1833 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 704 | 1129 | 524 | 180 | 510 | 619 |
| Base content per 1 kb (bases) | 384 | 616 | 286 | 98 | 278 | 338 |
| Base content (%) | 38.4% | 61.6% | ||||
| ND6 (size: 517 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 203 | 314 | 164 | 39 | 93 | 221 |
| Base content per 1 kb (bases) | 393 | 607 | 317 | 75 | 180 | 427 |
| Base content (%) | 39.3% | 60.7% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 15 (6.64%) 
Serine (Ser, S)
n = 16 (7.08%) 
Threonine (Thr, T)
n = 20 (8.85%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 11 (4.87%) 
Leucine (Leu, L)
n = 41 (18.14%) 
Isoleucine (Ile, I)
n = 29 (12.83%) 
Methionine (Met, M)
n = 13 (5.75%) 
Proline (Pro, P)
n = 14 (6.19%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 9 (3.98%) 
Glutamine (Gln, Q)
n = 6 (2.65%) 
Histidine (His, H)
n = 9 (3.98%) 
Lysine (Lys, K)
n = 5 (2.21%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 16 | 9 | 7 | 5 | 19 | 2 | 8 | 5 | 1 | 1 | 1 | 9 | 0 | 4 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 2 | 7 | 6 | 0 | 1 | 3 | 4 | 2 | 1 | 4 | 9 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 10 | 0 | 2 | 1 | 8 | 0 | 0 | 5 | 0 | 2 | 0 | 0 | 5 | 4 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 1 | 0 | 1 | 5 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 67 | 81 | 38 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 60 | 37 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 70 | 102 | 45 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFTTIVSSMITLFILFQLKISSQTFPAAPSSKVMTTEKTNNPWELKWTKIYLPLSLPQQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (2.99%)
Serine (Ser, S)
n = 8 (11.94%)
Threonine (Thr, T)
n = 10 (14.93%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (2.99%)
Leucine (Leu, L)
n = 8 (11.94%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 6 (8.96%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 1 (1.49%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (7.46%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 2 | 2 | 1 | 0 | 4 | 0 | 2 | 4 | 1 | 1 | 1 | 0 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 5 | 1 | 2 | 3 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 7 | 16 | 25 | 20 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 26 | 17 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 14 | 33 | 17 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 35 (6.81%)
Threonine (Thr, T)
n = 35 (6.81%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 41 (7.98%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 35 (6.81%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 19 | 16 | 26 | 16 | 7 | 16 | 1 | 18 | 5 | 1 | 11 | 6 | 22 | 2 | 17 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 0 | 8 | 20 | 14 | 0 | 4 | 9 | 28 | 5 | 8 | 7 | 13 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 21 | 0 | 9 | 7 | 16 | 0 | 0 | 3 | 9 | 11 | 1 | 1 | 6 | 11 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 1 | 7 | 8 | 9 | 1 | 2 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 100 | 130 | 132 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 137 | 96 | 207 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 145 | 219 | 134 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 12 | 11 | 6 | 4 | 15 | 0 | 6 | 6 | 0 | 5 | 2 | 7 | 0 | 0 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 2 | 4 | 4 | 1 | 0 | 1 | 4 | 1 | 2 | 3 | 3 | 8 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 10 | 0 | 3 | 4 | 8 | 0 | 1 | 3 | 3 | 7 | 0 | 1 | 2 | 6 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 14 | 0 | 4 | 7 | 5 | 0 | 2 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 58 | 66 | 48 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 54 | 62 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 75 | 101 | 46 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 13 (5.0%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 12 (4.62%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 21 (8.08%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 8 | 6 | 4 | 8 | 19 | 1 | 4 | 7 | 0 | 1 | 3 | 6 | 2 | 9 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 2 | 3 | 8 | 0 | 3 | 7 | 10 | 1 | 1 | 5 | 4 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 11 | 0 | 2 | 5 | 12 | 0 | 1 | 2 | 4 | 7 | 0 | 0 | 3 | 5 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 0 | 2 | 2 | 3 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 57 | 71 | 63 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 62 | 57 | 99 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 86 | 113 | 56 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 23 (6.05%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 28 (7.37%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.74%)
Leucine (Leu, L)
n = 56 (14.74%)
Isoleucine (Ile, I)
n = 40 (10.53%)
Methionine (Met, M)
n = 13 (3.42%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 29 (7.63%)
Tyrosine (Tyr, Y)
n = 17 (4.47%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.16%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 26 | 9 | 4 | 14 | 30 | 1 | 6 | 5 | 1 | 2 | 6 | 10 | 0 | 6 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 3 | 3 | 12 | 8 | 0 | 1 | 6 | 14 | 4 | 2 | 6 | 13 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 13 | 2 | 4 | 9 | 9 | 0 | 1 | 1 | 4 | 13 | 1 | 1 | 4 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 0 | 2 | 9 | 9 | 1 | 2 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 83 | 97 | 110 | 91 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 95 | 80 | 156 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 163 | 148 | 54 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.1%)
Alanine (Ala, A)
n = 25 (7.89%)
Serine (Ser, S)
n = 26 (8.2%)
Threonine (Thr, T)
n = 22 (6.94%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 10 (3.15%)
Leucine (Leu, L)
n = 58 (18.3%)
Isoleucine (Ile, I)
n = 26 (8.2%)
Methionine (Met, M)
n = 20 (6.31%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 20 (6.31%)
Tyrosine (Tyr, Y)
n = 16 (5.05%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 12 (3.79%)
Asparagine (Asn, N)
n = 11 (3.47%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 6 (1.89%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 17 | 18 | 4 | 11 | 31 | 3 | 9 | 6 | 0 | 4 | 2 | 3 | 1 | 12 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 5 | 12 | 8 | 0 | 1 | 6 | 3 | 3 | 3 | 10 | 8 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 10 | 2 | 1 | 9 | 13 | 0 | 1 | 2 | 7 | 9 | 1 | 0 | 5 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 8 | 4 | 0 | 3 | 6 | 0 | 1 | 3 | 3 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 63 | 89 | 88 | 78 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 92 | 58 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 107 | 134 | 59 | ||||||||||||
| ND2 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 20 (5.81%)
Serine (Ser, S)
n = 28 (8.14%)
Threonine (Thr, T)
n = 36 (10.47%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 61 (17.73%)
Isoleucine (Ile, I)
n = 38 (11.05%)
Methionine (Met, M)
n = 29 (8.43%)
Proline (Pro, P)
n = 20 (5.81%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 11 (3.2%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 23 (6.69%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 21 | 24 | 6 | 10 | 34 | 2 | 9 | 11 | 1 | 0 | 4 | 2 | 1 | 4 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 4 | 8 | 7 | 1 | 0 | 2 | 10 | 1 | 3 | 7 | 10 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 20 | 0 | 2 | 7 | 16 | 0 | 1 | 2 | 3 | 8 | 0 | 0 | 5 | 18 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 1 | 0 | 0 | 12 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 44 | 93 | 141 | 67 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 28 | 101 | 68 | 148 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 116 | 168 | 49 | ||||||||||||
| ND3 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 20 (5.81%)
Serine (Ser, S)
n = 28 (8.14%)
Threonine (Thr, T)
n = 36 (10.47%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 61 (17.73%)
Isoleucine (Ile, I)
n = 38 (11.05%)
Methionine (Met, M)
n = 29 (8.43%)
Proline (Pro, P)
n = 20 (5.81%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 11 (3.2%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 23 (6.69%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 21 | 24 | 6 | 10 | 34 | 2 | 9 | 11 | 1 | 0 | 4 | 2 | 1 | 4 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 4 | 8 | 7 | 1 | 0 | 2 | 10 | 1 | 3 | 7 | 10 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 20 | 0 | 2 | 7 | 16 | 0 | 1 | 2 | 3 | 8 | 0 | 0 | 5 | 18 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 1 | 0 | 0 | 12 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 44 | 93 | 141 | 67 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 28 | 101 | 68 | 148 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 116 | 168 | 49 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 25 (5.46%)
Serine (Ser, S)
n = 45 (9.83%)
Threonine (Thr, T)
n = 41 (8.95%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 9 (1.97%)
Leucine (Leu, L)
n = 84 (18.34%)
Isoleucine (Ile, I)
n = 54 (11.79%)
Methionine (Met, M)
n = 37 (8.08%)
Proline (Pro, P)
n = 22 (4.8%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 12 (2.62%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 21 (4.59%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 33 | 34 | 9 | 20 | 38 | 5 | 12 | 11 | 1 | 2 | 3 | 4 | 0 | 6 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 3 | 4 | 11 | 9 | 1 | 3 | 5 | 8 | 1 | 2 | 8 | 12 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 25 | 0 | 5 | 11 | 17 | 0 | 2 | 10 | 2 | 10 | 0 | 0 | 5 | 16 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 9 | 0 | 0 | 5 | 13 | 0 | 0 | 2 | 7 | 0 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 126 | 178 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 121 | 83 | 201 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 162 | 212 | 74 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 12 (12.24%)
Threonine (Thr, T)
n = 12 (12.24%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 20 (20.41%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 1 | 7 | 3 | 4 | 10 | 1 | 2 | 2 | 0 | 0 | 1 | 2 | 0 | 3 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 1 | 4 | 4 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 5 | 0 | 4 | 5 | 3 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 19 | 23 | 32 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 34 | 16 | 41 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 34 | 42 | 21 | ||||||||||||
| ND5 (size: 1833 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.1%)
Alanine (Ala, A)
n = 38 (6.23%)
Serine (Ser, S)
n = 59 (9.67%)
Threonine (Thr, T)
n = 53 (8.69%)
Cysteine (Cys, C)
n = 7 (1.15%)
Valine (Val, V)
n = 15 (2.46%)
Leucine (Leu, L)
n = 90 (14.75%)
Isoleucine (Ile, I)
n = 67 (10.98%)
Methionine (Met, M)
n = 41 (6.72%)
Proline (Pro, P)
n = 26 (4.26%)
Phenylalanine (Phe, F)
n = 41 (6.72%)
Tyrosine (Tyr, Y)
n = 17 (2.79%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 10 (1.64%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 36 (5.9%)
Glutamine (Gln, Q)
n = 14 (2.3%)
Histidine (His, H)
n = 14 (2.3%)
Lysine (Lys, K)
n = 23 (3.77%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 32 | 35 | 41 | 11 | 14 | 44 | 4 | 17 | 13 | 1 | 3 | 3 | 9 | 0 | 12 | 29 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 6 | 4 | 22 | 11 | 1 | 4 | 6 | 14 | 1 | 6 | 9 | 11 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 25 | 1 | 5 | 16 | 23 | 0 | 3 | 12 | 6 | 11 | 2 | 0 | 13 | 23 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 9 | 1 | 1 | 9 | 23 | 0 | 3 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 98 | 137 | 235 | 141 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 71 | 161 | 125 | 254 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 226 | 259 | 115 | ||||||||||||
| ND6 (size: 517 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.79%)
Alanine (Ala, A)
n = 8 (4.68%)
Serine (Ser, S)
n = 8 (4.68%)
Threonine (Thr, T)
n = 7 (4.09%)
Cysteine (Cys, C)
n = 4 (2.34%)
Valine (Val, V)
n = 14 (8.19%)
Leucine (Leu, L)
n = 27 (15.79%)
Isoleucine (Ile, I)
n = 13 (7.6%)
Methionine (Met, M)
n = 14 (8.19%)
Proline (Pro, P)
n = 3 (1.75%)
Phenylalanine (Phe, F)
n = 14 (8.19%)
Tyrosine (Tyr, Y)
n = 8 (4.68%)
Tryptophan (Trp, W)
n = 5 (2.92%)
Aspartic acid (Asp, D)
n = 6 (3.51%)
Glutamic acid (Glu, E)
n = 7 (4.09%)
Asparagine (Asn, N)
n = 4 (2.34%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.17%)
Arginine (Arg, R)
n = 1 (0.58%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 1 | 0 | 2 | 0 | 1 | 3 | 8 | 0 | 0 | 8 | 1 | 1 | 4 | 12 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 14 | 4 | 0 | 5 | 0 | 1 | 2 | 12 | 0 | 2 | 13 | 2 | 0 | 0 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 1 | 0 | 1 | 2 | 4 | 0 | 8 | 0 | 3 | 13 | 3 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 4 | 4 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 62 | 10 | 44 | 56 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 22 | 27 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 61 | 7 | 22 | 82 | ||||||||||||
| Total protein-coding genes (size: 11405 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 212 (5.58%)
Alanine (Ala, A)
n = 236 (6.21%)
Serine (Ser, S)
n = 309 (8.13%)
Threonine (Thr, T)
n = 312 (8.21%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 158 (4.16%)
Leucine (Leu, L)
n = 592 (15.58%)
Isoleucine (Ile, I)
n = 368 (9.69%)
Methionine (Met, M)
n = 235 (6.19%)
Proline (Pro, P)
n = 194 (5.11%)
Phenylalanine (Phe, F)
n = 236 (6.21%)
Tyrosine (Tyr, Y)
n = 130 (3.42%)
Tryptophan (Trp, W)
n = 105 (2.76%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 92 (2.42%)
Asparagine (Asn, N)
n = 167 (4.4%)
Glutamine (Gln, Q)
n = 85 (2.24%)
Histidine (His, H)
n = 99 (2.61%)
Lysine (Lys, K)
n = 98 (2.58%)
Arginine (Arg, R)
n = 65 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 174 | 194 | 192 | 76 | 103 | 268 | 25 | 103 | 78 | 7 | 38 | 33 | 77 | 10 | 93 | 143 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 43 | 8 | 21 | 43 | 106 | 82 | 5 | 31 | 50 | 98 | 33 | 35 | 63 | 93 | 3 | 54 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 87 | 165 | 6 | 43 | 78 | 130 | 2 | 15 | 41 | 48 | 82 | 8 | 17 | 55 | 112 | 35 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 64 | 80 | 12 | 21 | 49 | 95 | 3 | 13 | 12 | 38 | 2 | 0 | 0 | 8 | 0 | 97 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 768 | 915 | 1236 | 881 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 467 | 995 | 749 | 1589 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 176 | 1238 | 1604 | 782 | ||||||||||||
>NC_014867.1 Rattus fuscipes mitochondrion, complete genome GTTAATGTAGCTTATAACAAAGCAAAGCACTGAAAATGCTTAGATGGATTGTCAAAAATCCCATAAACAC AAAGGTTTGGTCCTGGCCTTATAATTAATTGGAGGTAAGATTACACATGCAAACATCCATAAACCGGTGT AAAATCCCTTAAACATTTACCCAAAACTTAAGGAGAGGGCATCAAGCACATAACACAACATAGCTCAAGA CGCCTTGCCTAGCCACACCCCCACGGGACTCAGCAGTGATAAATTTTAAGCAATAAACGAAAGTTTGACT AAGCTATACCTCTCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTAACCCAAACTAATT ATTTTCGGCGTAAAACGTGCTAACTATAAACCACACAATAGAATTAAAATCCAACTTATATGTGAAAATT CATTGTTAGGACCTAAAACCAATAACGAAAGTAATTCTAACTATTTATATGACGCACGATAGCTAAGACA CAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTTAATAATTACATCTACAAAAATATTTGC CAGAGAACTACTAGCCACAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATATCCATCTAGAGGAGCCT GTTCTATAATCGATAAACCCCGTTCCACCTTACCACTTCTTGCTAATTCAGCCTATATACCGCCATCTTC AGCAAACCCTAAAAAGGCACCAAAGTAAGCACAAGAACAAACATAAAAACGTTAGGTCAAGGTGTAGCCA ATGAAGTGGAAAGAAATGGGCTACATTTTCTTTCCAAAGAACATTACGAAACCCTTTATGAAACTAAAGG ATAAAGGAGGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATAGCGCAATGAAGTACGCACACA CCGCCCGTCACCCTCCTCAAATTAAATTAACACATACTTATACATAATTCTACCAACAAATTTATGAGAG GAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAACAATCACAGTGTAGCTTAATTACA AAGCATCTGGCCTACACCCAGAAGAATTCATAAAAATGAACACTTTGAACTAATTCTAGCCCTAGAACCA ATTAATATAACTAAACTACCACATAAATTAAAACATTCAACTCATAAAAGTATTGGAGAAAGAAATTTAC TACCAGGCGCTATAGAGAAAGTACCGCAAGGGAATGATGAAAGACTAATCTAAAGTAAAAACAAGCAAAG ATTAAACCTTGTACCTTTTGCATAATGAATTAACTAGAAAAACCTTAACAAAAAGAATTTAAGCTAAAAA CCCCGAAACCAAACGAGCTACCTAAAAACAATTTCATGAATCAACCCGTCTATGTAGCAAAATAGTGGGA AGATTTTTAGGTAGAGGTGAAAAGCCTACCGAGCTTGGTGATAGCTGGTTGCCCAAAAAAGAATTTCAGT TCAACTTTAAGTCTACCATAAGAACAGCAAATCAAAATGTAAACTTAAAATATAGCCAAAAGAGGGACAG CTCTTTAGGTAAGGAAAAAACCTTAAATAGTGAATAAATAACTTATTAACTTAACCATTGTAGGCTTAAA AGCAGCCATCAATAAAGAAAGCGTTCAAGCTCAACATACTTAAATAAGGGTTAATCCCACAAATCTCAAT AAATTCCTATACTACAAATTGGGCTAATCTATAAAACCATAGATGAAATACTGTTAATATGAGTAACAAG AACTAATTCTCCTAGCACAAGTGTATGACAACCCGGATAACCATTGTCAATTATCGAACTATAGGTATTA GCCCCCAATAAAACTACCTAGTACTAACTCGTTAACCCAACACAGGCGTGCTCTAAGGAAAGATTAAAAA AAGTAAAAGGAACTCGGCAAACACGAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATAACAAGTA TTAGAGGCATTGCCTGCCCAGTGACTAAAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATA ATCACTTGTTCCTTAATTAGGGACTAGAATGAATGGCTAAACGAGGGCTCAACTGTCTCTTACTTTCAAT CAGTGAAATTGACCTTCCAGTGAAGAGGCTGGAATACCACAATAAGACGAGAAGACCCTGTGGAGCTTCA ATTTACTAGCTTAACTTATTCATAATAACCTAATGGACTAGCACAAAATAAGTATAAGCTAAAAAATTTC GGTTGGGGTGACCTCGGAGAATAAAAGATCCTCCGAACGATTTTAACCTAGACCCACAAGTCAAAGTAAC ACTAATATCCAATTGACCCAATTATTGATCAACGGACCAAGTTACCCCAGGGATAACAGCGCAATCCTAT TTAAGAGTTCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAGAA GCTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGG TCGGTTTCTATCTATTTACAATTTCTCCCAGTACGAAAGGACAAGAGAAATGGAGCCACCTTATCACAAG CGCTCCCAACCAATTTATGAAAAAAATCTCAACAAAATATGTATGTACAACAAATATACCTAGACCAGGT CATTAGGGTGGCAGAGCCAGGTAATTGCATAAGACTTAAAACCTTCTTCCCAGAGGTTCAAATCCTCTCC CTAATAATGTACTTTATTAATATCCTGACACTTCTAGCCCCAATCTTAATCGCCATAGCCTTCCTCACCT TAGTGGAACGGAAAATCCTAGGTTATATACAATTACGCAAAGGCCCCAACATCGTAGGCCCGTATGGCAT TCTACAACCATTTGCAGACGCCATAAAACTATTTATAAAAGAACCCATACGTCCCTTAACTACCTCAATA TCCCTATTTATCATCGCACCAACCCTCTCTCTCTCACTAGCTCTAAGCCTATGAGTTCCCCTACCAATAC CCCATCCCCTCATCAATCTTAACTTAGGCATACTATTTATTCTAGCTACATCAAGCCTTTCAGTTTATTC CATTCTATGATCAGGGTGGGCATCAAATTCAAAATACTCCCTATTTGGAGCCCTACGAGCCGTTGCCCAA ACCATCTCCTATGAAGTCACAATAGCCATCATCCTTTTATCCGTACTCCTAATAAGTGGCTCATTCTCCC TACAAATACTCATCACTACACAAGAGCATATCTGACTGCTAATCCCCGCCTGACCAATAGCCATAATATG ATATATTTCAACCCTAGCAGAAACAAACCGCGCCCCTTTTGACCTCACGGAAGGAGAGTCAGAGCTAGTT TCAGGCTTCAACGTCGAATACGCTGCAGGACCATTTGCCCTATTCTTTATAGCTGAGTACACTAACATTC TCTTAATAAATGCTCTAACATCAATTGTATTCCTAGGGCCCTTATACTACATCACCCACCCTGAACTATA CTCATTCAACTTCATAACAGAAACGTTACTGCTATCCACAACTTTCCTATGAATCCGAGCATCCTACCCT CGCTTTCGATATGACCAACTAATGCACCTCCTATGAAAAAATTTTCTCCCCCTAACACTAGCACTATGCA TATGATATATTTCCCTCCCAATTTTTCTAGCAGGGATCCCACCCTACACATAGAAATATGTCTGACAAAA GAGTTACTTTGATAGAGTAAATAATAGAGGTTCAAACCCTCTTATTTCTAGGATAATAGGAATTGAACCT ACACTTAAGAATTCAAAATTCTCCGTGCTACCAATACACCCCATCCTATATAGTAAGGTCAGCTAACTAA GCTATCGGGCCCATACCCCGAAAATGTTGGTCTAAACCCTTCCCGTACTAATTAATCCTATCACCCTAAT CATCATCTACTTCACCCTTTTCATAGGGCCCGTAATCACAATATCTAGCTCCAACTTACTCCTAATGTGA GTCGGATTAGAAATAAGTCTTTTAGCCATTATCCCCCTACTAACTAACAAAAAAACCCCACGATCAACCG AAGCAGCAACAAAATACTTTCTCACACAAGCTACAGCCTCAATAATCCTATTACTAGCGATTATTCTAAA CTACAAACAATCAGGAATATGAATGTTTCAACAACAAACCAACAACATGCTACTCAACATAACACTAATT TCAATAGCCATAAAACTTGGACTAGCCCCATTCCACTACTGACTACCCGAAGTCACCCAAGGAATCCCCA TGCACATTGGACTAATCCTACTGACATGACAAAAAATTGCTCCACTATCAATTTTATACCAAATTTATCA ACTCCTAAACCCAACCATCACAACCATCCTTGCAATTGCATCAGTCTTCATCGGCGCCTGAGGAGGCCTA AACCAGACACAAACACGAAAAATTATAGCATACTCATCAATTGCCCACATAGGATGAATAGTGGCTATCC TTCCATATAACCCTAACTTAATGCTCCTAAACCTAATAATTTATATCTTACTAACCATCCCAATATTTAT CTCATTCATAATAAATTCAGCAACAACAATCAACTCCTTCTCACTAGCATGAAATAAAACCCCCATAATT CTAGCCATAACATCCACCGTCCTCCTATCAATAGGAGGACTCCCTCCCCTAACAGGATTCTTACCAAAAT GAACAATCATCTCAGAGCTCCTAAAAAACAACTGCTCAATTCTATCAACACTAATAGCTATCATAGCCCT ACTAAACTTATTCTTCTACACACGTCTAATTTACTCCATATCTCTCACCATATTTCCAACCAACAATAAT TCCAAAATAATTTCCCACCATACAAACCTAAAACATAACCCCATCCTACCAACACTCACAGTACTAAGCA CCCTAACCCTACCACTTTCATCCCAACTGATAACATAGAAGTTTAGGATATAGAGTCCAAGAGCCTTCAA AGCCCTTAGAAAACGAACAAGTTTAACTTCTGAATAAGGACTGTAGGACTATACCCTACATCTATTGAAT GCAAATCAACTGCTTTAATTAAGCTAAGACCTTAACTAGATTGGAAGGATTCAAACCTACGAAAATTTAG TTAACAGCTAAATACCCTACTTACTGGCTTCAATCTACTTCTCCCGCCTATCAGAAAAGAGGCGGGAGAA GCCTTAGTAGAGGAGATCTCTACACCTTCGAATTTGCAATTCGACATGATAATCACCTTAAGGCTTCTTG GTAAGAAGGGGGTTTAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCATCTTACCTATGTT CGTAAACCGTTGACTATTTTCAACCAACCACAAAGATATCGGGACCCTCTATTTATTATTTGGTGCCTGA GCAGGAATAGTAGGAACAGCCCTGAGCATTTTAATTCGAGCTGAATTAGGACAACCAGGCGCACTCCTAG GCGATGACCAAATCTATAATGTTATCGTCACAGCCCATGCATTCGTAATAATTTTCTTTATAGTTATACC AATAATAATCGGAGGCTTCGGGAACTGACTTGTCCCACTAATAATTGGAGCCCCTGACATAGCATTCCCA CGAATAAATAACATAAGCTTTTGATTGCTTCCTCCATCATTTCTACTTCTCTTAGCATCATCCATAGTAG AAGCCGGAGCAGGAACAGGATGAACAGTTTACCCCCCTTTAGCCGGAAATCTTGCCCATGCCGGGGCATC TGTAGACTTAACTATTTTCTCCCTTCACCTAGCCGGAGTGTCCTCTATCTTAGGAGCTATTAACTTCATT ACAACTATTATTAATATGAAACCCCCTGCCATAACCCAATACCAAACACCCCTCTTTGTATGATCAGTAT TAATTACAGCCGTTCTATTACTTCTTTCATTACCAGTGTTAGCAGCAGGTATTACTATGCTTCTTACAGA TCGAAACCTAAACACTACTTTCTTCGACCCCGCTGGAGGAGGAGACCCAATCCTCTATCAGCATTTATTC TGATTCTTTGGCCACCCAGAAGTCTATATTCTTATCCTTCCAGGGTTTGGGATTATCTCACACGTAGTTA CTTACTACTCTGGAAAAAAAGAACCATTCGGATATATAGGAATAGTCTGAGCCATGATATCTATTGGCTT CCTAGGATTTATCGTATGAGCTCATCATATATTTACAGTAGGCCTAGATGTAGACACACGAGCCTACTTT ACATCTGCCACTATAATTATCGCAATTCCTACAGGTGTAAAAGTATTCAGCTGACTCGCTACTTTACATG GAGGAAATATCAAATGATCCCCCGCCATACTATGAGCCTTAGGATTTATCTTCTTATTCACAGTAGGAGG CTTAACTGGAATCGTCCTATCTAACTCATCACTTGACATTGTACTTCATGACACATACTATGTAGTAGCC CATTTCCACTATGTACTATCTATAGGAGCAGTATTCGCTATCATAGCCGGCTTTGTCCACTGATTCCCAC TATTCTCAGGATATACCCTAAATGATACATGGGCAAAAGCCCACTTCGCCATTATATTTGTAGGTGTTAA CATAACATTCTTCCCTCAACACTTCCTAGGATTATCAGGAATACCCCGTCGATACTCCGATTACCCAGAT GCTTATACCACATGAAACACAGTTTCATCTATAGGCTCATTTATTTCACTCACAGCTGTTCTTGTAATAA TCTTTATAATCTGAGAAGCATTTGCATCAAAACGAGAAGTACTTTCAGTTTCTTACTCCTCAACAAACCT AGAATGACTTCACGGATGTCCCCCACCTTACCACACATTCGAAGAGCCTTCCTACGTTAAAGTTAAGTAA GAAAGGAAGGATTCGAACCCCCTACAACTGGTTTCAAGCCAATTCCATAACCACTATGTCTTTCTCAATG AGATATTAGTAAAACAATTACATAACCTTGTCAAGGTTAAATTATAGAGTTAAATCTGTATATCTCACAT GGCTTACCCATTCCAACTTGGCTTACAAGACGCCTCATCACCTATCATAGAAGAACTTACAAACTTCCAT GATCACACCCTAATAATTGTTTTCCTCATCAGCTCCCTAGTACTCTACATCATCTCACTAATATTAACAA CAAAACTAACACATACAAGTACAATAGACGCTCAAGAAGTAGAAACAATTTGAACAATCCTTCCAGCTGT TATTCTTATCCTAATCGCCCTCCCCTCCCTACGAATCTTATACATGATAGACGAAATCAACAACCCAGTT TTAACCGTAAAAACTATGGGGCACCAATGATACTGAAGCTATGAATACACCGACTATGAAGACCTATGCT TCGATTCTTACATAATTCCAACCCACGACCTAAAACCAGGTGAACTTCGCCTACTAGAAGTTGATAATCG AGTAGTCCTACCAATAGAACTCCCAATTCGTATACTAATCTCATCCGAAGACGTCTTACATTCATGAGCC GTTCCTTCTCTAGGATTAAAAACCGATGCAATCCCAGGCCGTCTTAATCAAGCCACAGTAACATCAAACC GACCCGGCTTGTTCTACGGCCAATGCTCCGAAATCTGTGGGTCAAACCACAGCTTCATACCTATTGTACT AGAAATAGTACCCCTAAAATATTTCGAAAACTGATCAGCTTCTATAATTTAAACTCATTGCGAAGCTTAG AGCGTTAACCTTTTAAGTTAAAGTTAGAGACCAAAAATCTCCACAATGACATGCCACAACTAGACACATC TACATGATTTACTACTATTGTCTCCTCAATAATTACATTATTTATTCTATTTCAACTAAAAATCTCTTCC CAAACCTTCCCCGCAGCTCCCTCATCCAAAGTTATAACCACAGAAAAAACAAATAACCCTTGAGAACTAA AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACAGTAATAGGTCTACCAATTGTCGTTACCATC ATTATATTCCCATCAATTCTTTTCCCATCATCAGAGCGCCTTATTAGCAATCGCCTACACTCATTTCAAC ACTGACTAATTAAACTCATCATCAAACAAATAATATTAATCCATTCACCAAAAGGACGAACCTGAGCACT AATGATCGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTGCTTCCCCATACATTCACC CCCACCACACAGCTATCCATAAACCTAAGCATGGCCATCCCTCTATGAGCAGGGGCTGTAATTTTAGGAT TCCGACACAAACTAAAAAATTCTTTAGCCCATTTCCTACCACAAGGAACACCCATCTCACTCATTCCCAT ACTAATTATCATCGAAACTATCAGCTTATTCATCCAACCAATAGCACTAGCAGTACGACTAACAGCAAAT ATCACAGCAGGCCATCTATTAATACACCTAATTGGAGGGGCTACTCTAGTACTCATGAACATCAGCCCAC CAACCGCCACAATCACATTCATCATCCTTCTTTTACTTACAGTACTTGAATTCGCCGTAGCCTTAATTCA AGCCTACGTATTTACTCTCCTAGTAAGCCTGTACCTACATGACAATACATAATGACCCACCAAACCCACG CATACCACATAGTAAATCCAAGCCCATGACCACTAACAGGAGCACTATCAGCCCTTCTACTTACATCTGG CTTAGTAATATGATTCCACTACAACTCCACAATTCTCCTCTCACTAGGCCTACTAACAAACATTCTAACT ATATATCAATGATGACGAGATATTATCCGTGAAGGAACATTCCAAGGTCACCATACCCCTATCGTACAAA AAGGCCTACGATATGGGATGATTCTATTTATCATCTCCGAAGTGTTCTTTTTCTCCGGATTTTTCTGAGC ATTCTACCATTCCAGTCTAGCCCCCACCCACGACCTAGGCGGTTGCTGACCCCCAACAGGAATTATCCCC CTAAATCCCCTAGAAGTGCCCCTTCTAAATACATCAGTCCTCCTGGCATCAGGAGTCTCAATTACATGAG CTCATCACAGCCTCATAGAAGGTAACCGAAACCACATAAACCAAGCCTTACTAATTACTATTCTCCTAGG ACTTTACTTCACTATCCTCCAAGCTTCAGAATATTTCGAAACCTCATTTTCCATTTCAGACGGAATTTAC GGCTCAACATTCTTCATAGCAACAGGATTTCATGGCCTACATGTAATTATTGGCTCAACTTTTCTCATTA TCTGCTTATTACGACAACTAAAATTCCACTTTACATCAAAACACCATTTTGGATTTGAAGCAGCAGCATG ATACTGACACTTCGTAGATGTAGTCTGACTCTTCCTATACGTTTCTATCTATTGATGAGGATCATACTCC CTTAGTATAAAAAATACAACTGACTTCCAATCAGTAAATTCTGAAAAAATCCAGAAGAGAGTAATTAACC TACTTATCATTATTATAATTAACATTATTCTATCTTTTATCCTCATTACAATCGCATTCTGATTACCTCA AATAAACCTCTACTCCGAAAAAGCAAACCCATATGAATGTGGATTTGACCCAACAAGTTCTGCACGCCTC CCTTTTTCAATAAAATTTTTCTTAGTAGCCATTACATTCCTTCTGTTCGACCTAGAAATCGCCCTTCTAC TCCCCCTCCCATGAGCAGTACAAACAACTAATATTACTACAATAATAACAACCGCCTTTATCCTAATTAC TATCCTGTCTCTCGGCCTAAGCTACGAATGAACACAAAAAGGACTAGAATGAACAGAATAACTGGTAATT AGTTTAAATAAAATTAATGATTTCGACTCATTAGATTATGATGACAATCATAATTACCAACAATGACATC TGCCTTCCTAAATCTAACCTCAGCCTTTACATTATCTCTCCTAGGAACCCTTATATTTCGTTCTCACCTA ATATCCACCCTCCTTTGCCTAGAAGGTATAATATTATCCCTATTCATTATAACCTCAACATCCACACTAA ATTCCAACTCCATAGCCTCTATAACCATTCCAATCACCATTCTAGTCTTTGCAGCCTGCGAAGCAGCAGT AGGCCTAGCTCTTCTAGCAAAAATTTCAAACACTTACGGAACAGATTACGTACAAAACCTCAACCTCCTG CAATGCTAAAAATTATCTTCCCCTCACTCATGCTTCTCCCACTAACATGACTCTCAAACGACAAAAAAGT CTGAACTAACATTACCTCCTACAGCTTTCTAGTAAGCCTAGTAAGTTTATCACTACTATGACAAAATGAC GAAAATCACCTAAATTTCTCAATTACATTCTCCTCCGACCCACTATCCACCCCCCTAATTATCCTAACAA CCTGACTACTCCCACTAATAATCCTCGCTAGCCAGAACCATATAAAAAAAGAAAGCCCCACACATCAAAA ACTCTACATCTCAATACTCATCAGCCTTCAAACCCTACTTATCATAACATTCTCCACAATAGAACTCATC TTATTTTACATTCTATTCGAAGCCACTCTAATCCCAACATTAATTATCATCACCCGATGAGGTAATCAAA CAGAACGCCTCAACGCAGGTATCTACTTCCTATTCTATACACTAATTGGCTCTATCCCACTTTTAATTGC CCTTATTTCAATCCAAAACTCAATAGGAACCCTCAACTTTCTAATCCTCTCTCTCACAACACAACCTCTA TCCTCAACATGATCCAATAACATCCTATGATTAGCATGCATAATAGCATTTATAATTAAAATACCATTAT ATGGAGTTCATCTATGACTTCCAAAAGCCCATGTAGAAGCCCCAATTGCCGGCTCCATAATCCTAGCTGC AATTCTCCTAAAACTAGGGGGCTACGGAATAATACGAATCTCTATCATCCTAGACCCCCTAACAAAATCC CTAGCCTACCCATTTATTATACTCTCCCTGTGAGGAATAATCATAACCAGTTCAATCTGCTTACGCCAAA CAGACTTAAAATCATTAATCGCCTACTCATCAGTAAGCCACATAGCCCTTGTTATTACAGCCATTATAAT TCAAACTCCATGAAGCTTCATAGGTGCTACTATATTAATAATCGCGCATGGACTAACTTCATCACTCCTA TTCTGCCTGGCAAACACTAACTACGAACGAATCCACAGCCGAACTATAATCATAGCTCGAGGATTACAAA TAATCTTCCCACTGATAGCAACATGATGACTACTAGCAAGCCTAGCCAACCTAGCCCTACCACCCCTGAT CAACCTCATAGGAGAATTATTTATCGTCATAGCAACATTCTCTTGATCAAACCCCTCTATTATCCTCATA GCAACAAACATTGTCATCACAGGAATATACTCAATGTACATAATTATTACAACCCAACGAGGCAAACTAA CTAGCCACATAAACAACCTCCAACCTTCCCACACACGAGAATCAACACTCATAATCCTTCACATCCTTCC CCTCATACTACTAACAATTAACCCCAAACTAATCACAGGCCTGACAATATGTAAATATAGTTTACAAAAA ACATTAGACTGTGAATCTAACAACAGGAAATCACATTCCTTATTTACCAAGAAAGTATGCAAGAACTGCT AATTCACGCGCCCATACCTAAACATATGGCTTTCTTACTTTTATAGGATAGAAGTAATCCATTGGTCTTA GGAACCAAAGACTTTGGTGCAAATCCAAATAAAAGTAATAAATATAATAACATCCGCAATCCTCATAATC TTAATATTACTTACAGCACCAATCATTATCTCTATAACCAACCTGCCCAAACTTATTGACTTCCCATCAT ATGCTACTTCATCAATCAAATTCTCATTTTTTCTCAGCCTATTACCCTTATTATTATTTTTCCACTACAA TACAGAATACATAATCACCAACTGACACTGACTAACCATTAACTCTATCAAACTTAGCATAAGCTTTAAA ATTGACTATTTCTCAACCCTATTCCTGTCAGTAGCCTTATTCGTAACATGATCAATCATACAATTCTCCT CATGATATATACATTCCGACCCCCACATTAACCGATTCATTAAATACTTAATATTATTCCTAATTACTAT ACTAATCCTAACCTCAGCTAACAATCTATTCCAACTCTTCATCGGATGGGAAGGCGTAGGAATTATATCC TTCCTACTAATCGGATGATGGTATGGCCGTGCAGACGCCAACACAGCAGCCCTCCAAGCAATTCTATACA ACCGAGTAGGAGACATTGGTTTCATCCTAGCTATAACCTGATTCTGCCTAAATATAAACTCTTGAGAACT TCAACAAATCTTCCTAACCAATAACAGTAGCCTAGTACCCCTTACAGGGCTCCTAATCGCAGCCACAGGA AAATCCGCCCAGTTTGGTCTCCACCCCTGACTCCCATCAGCTATAGAAGGCCCAACTCCTGTATCCGCCC TACTACACTCAAGCACTATAGTCGTTGCAGGAATCTTCCTAATAATTCGATTCCATCCACTAACCTCAAA CAATAGCACTATCATAACAGCCATACTATGCCTTGGAGCCATCACCACATTATTCACAGCAATCTGCGCG CTCACCCAAAACGATATCAAAAAAATTGTAGCCTTCTCCACATCCAGCCAACTAGGTCTCATAATAGTTA CACTAGGAATTAACCAACCCTACTTAGCCTTTCTCCACATCTGCACCCACGCATTCTTCAAAGCCATACT ATTCATATGCTCTGGATCAATTATTCACAGCTTAAACGACGAACAAGACATTCGAAAAATAGGCAGTATA ATAAAAGTAATACCATTTACATCATCCTGCCTCATTATCGGTAGCCTAGCCTTAACCGGAATACCTTTCC TCACAGGATTCTACTCTAAAGACCTTATCATCGAAGCCATCAACACGTGTAATACCAACGCCTGAGCCCT AATAATTACCTTAATTGCCACATCCATAACTGCCATATACAGCATACGAATCATCTACTTCGTCACCATA ACAAAACCTCGTTACTCCCCACTAATCACTATTAACGAAAATAACCCTAATCTCATCAATCCAATTAAAC GCCTAGCATTAGGAAGCATTATAGCAGGCTTTATTATCTCACTAAATATTCCTCCAACTAACATTCAAGT CCTTACAATACCTTGATACCTAAAAATAACAGCCCTATTCGTTACAATACTAGGATTCGCCATCGCCCTA GAACTTAACAACCTAGCCCTAAACCTATCATCAACAAACAAAACCACCCGTCCCTCACTATTCTCAACAT CCCTGGGCTATTTTCCATCAATTGTACACCGAATTATCCCCCAAAAAACACTAAATTCCAGCTATAAAAT ATCCCTAAACCTTCTAGACCTAATCTGATTAGAAAAAACAATTCCAAAATCAACCTCAATTACTCACATC CACCTATCCAAAATAATAGCCAATCAAAAAGGACTAATTAAACTGTACTTCCTATCCTTTCTCATTACAA TCTCACTAATCTTTATTTTACACACACTTAGTCCCGAGTGATTTCAATAATAATAAAAATTCCCGCAAAC AATGACCACCCAGCCATCACCATCATTCAAGTAGCACAACTATACATACCTGCAACCCCAATACCACCTT CCAGCATCACCCCAACATCATCAACCTCATACATTAATCAATCCCCCAAACCATTAAAATCAACTAGCTC AATTTTACCACTCAAGTTAAGCAAATAAAGCATCACTAAGTCCATTAAAAACCCCAAAACAAAAACCCCA AAAATGAACCAATTAGAACCCCAAGTCTCCGGATATTCCTCAGTAGCCATAGCAGTTGTATACCCAAATA CAACCAGCATCCCACCCAAATAAATCAAAAACACCATTAAACCTAAAAACGAACCCCCAAAACCCAAGAC CATCAGACACCCAATACACCCACTAACAATCAAACCAAACCCCCCATAAATAGGCGAAGGCTTCAACGCC AATCCTAAACAACCAGCCAAAAACAATAAACTTAAAATGAACATATAATTTGTCATCATTTCTACACAGC ATTTAACTGTGACCAATGACATGAAAAATCATCGTTGTAATTCAACTATAGAAACATCTAATGACAAACA TTCGAAAATCTCACCCCCTACTCAAAATTATTAATCACTCTTTCGTTGACCTTCCCGCCCCATCCAATAT TTCATCATGATGGAACTTTGGCTCTCTCTTAGGGATGTGCCTCATAGTTCAAATCATCACAGGCCTATTC CTAGCAATACACTACACATCCGACACCACAACAGCATTCTCATCCGTCACCCATATCTGCCGAGATGTAA ACTATGGCTGACTAATCCGATACCTACATGCCAACGGAGCCTCCATATTCTTCATCTGCCTATACCTCCA CGTAGGACGAGGAATGTACTACGGATCCTACACCTTCCTAGAAACATGAAACATCGGAGTCATTCTACTA TTCACAGTCATAGCAACGGCATTCATAGGCTATGTACTTCCATGAGGACAAATGTCCTTCTGAGGGGCCA CGGTAATTACAAACCTTCTATCAGCTATTCCTTACATCGGAACCACCTTGGTAGAATGAATCTGAGGGGG CTTCTCAGTAGACAAAGCAACCTTAACCCGTTTCTTCGCTTTCCACTTCATCCTCCCATTTATCATCGCC GCCCTTGCAATCGTCCACCTCCTCTTTCTACACGAAACAGGATCAAACAACCCCACAGGACTAGACTCCA ACGCAGACAAAATTCCATTCCACCCCTATTACACAATTAAAGACCTCCTAGGAGTATTCATACTACTCCT ATTCTTAATAACTCTAGTACTATTCTTCCCAGACCTACTAGGAGACCCAGACAACTACACACCTGCCAAC CCCCTAAATACTCCGCCACACATCAAGCCAGAATGATACTTTCTATTTGCCTACGCCATCTTACGCTCTA TCCCCAACAAACTAGGAGGAGTCGTAGCCCTAGTCCTATCAATCCTCATCCTAGCTTTCCTGCCATTCTT ACACACTTCAAAACAACGCAGTCTAACCTTCCGTCCAATCACCCAGACCCTATACTGAATCCTAGCAGCC AACCTCCTCATCTTAACATGAATCGGGGGCCAACCAGTAGAATACCCATTCATCATCATCGGTCAACTAG CCTCCATCAGCTATTTTTCAATTATCCTCATTCTCATACCAATTTCCGGAATTATTGAAGATAAAATACT AAAATGAAATTAATAGTCCCGATAGTATAAAAATTACCTTGGTCTTGTAAACCAAAAATGAAAAGTCAAT TTTCTCAGGACATTACCCTTACATACATCAAGAAGAAGGAAATAACCCCTCACCATCAACACCCAAAGCT GACATTCTAATTAAACTACTTCTTGATAGTACATAAAATTATATAGAACATTAATACATTAATGTATATC GTGCATTAATTTCTTTTCCCCATGCATATAAGCAATGTAAATCTTAATTAATGTATCAAGACATAATAAT TAAATCAACTTAAATCCTTCACAACATGGATATTCTTAAATACATTAAGATAATGTTTTCCAGACATACC TGTGTTATTAGACATACACCATAAAGTCATAAATCTTTCTTTTCCATATGACTATCCTCGACCCTAATTT GTCTATATTTCTACCATCCTCCGTGAAATCAACAACCCGCCCACTAGTCCCCCTCTTCTCGCTCCGGGCC CATACAACTTGGGGGTCGCTATAGTGAAACTTTATCAGACATCTGGTTCTTTCTTCAGGGTCATAAATGA TTTATCGTCCATACGTTCCCCTTAAATAAGACATCTCGATGGTACAGGTCTAGCAATTAGTAACCAACAT AATTATAAATTACAGACATTTGGTATTTTTTAATTTTCGGATGCCTTCAGTCAACATAGCCGTCAAGGCA TGAAGGTCAGCCCTAAGTCCTGGGGAACCTTTTAATTAAGGATCATTAATCCCCATAAACAAAGCTCTGA AGGCTATTTATTCATGCTTGTAAGACATACAAATTTACCAAAACTGAAAAAACTATCAACCAACAAACCC CCCCACCCCCCAACTTTAATGCCAAACCCCAAAAACATTAAAGGAAAAAGAAAATATATTTAATTCTAAA AGACCCCTTTTCATTCTGGTAGACCACAAAATTTTGACCCAAATCCCAGTATTAGTAAAATTTTCCTCAC GAAATTCACCTAACCAAAACCACTTTCTCCCACCCAACCCTAAAGAAATTTACCACACACA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions