Viewing data for Phocoena phocoena


Scientific name Phocoena phocoena
Common name Harbor porpoise
Maximum lifespan 20.40 years (Phocoena phocoena@AnAge)

Total mtDNA (size: 16382 bases) GC AT G C A T
Base content (bases) 6646 9736 4420 2226 4495 5241
Base content per 1 kb (bases) 406 594 270 136 274 320
Base content (%) 40.6% 59.4%
Total protein-coding genes (size: 11352 bases) GC AT G C A T
Base content (bases) 4662 6690 3277 1385 3176 3514
Base content per 1 kb (bases) 411 589 289 122 280 310
Base content (%) 41.1% 58.9%
D-loop (size: 909 bases) GC AT G C A T
Base content (bases) 364 545 236 128 276 269
Base content per 1 kb (bases) 400 600 260 141 304 296
Base content (%) 40.0% 60.0%
Total tRNA-coding genes (size: 1512 bases) GC AT G C A T
Base content (bases) 575 937 331 244 421 516
Base content per 1 kb (bases) 380 620 219 161 278 341
Base content (%) 38.0% 62.0%
Total rRNA-coding genes (size: 2555 bases) GC AT G C A T
Base content (bases) 1018 1537 558 460 610 927
Base content per 1 kb (bases) 398 602 218 180 239 363
Base content (%) 39.8% 60.2%
12S rRNA gene (size: 974 bases) GC AT G C A T
Base content (bases) 418 556 235 183 210 346
Base content per 1 kb (bases) 429 571 241 188 216 355
Base content (%) 42.9% 57.1%
16S rRNA gene (size: 1581 bases) GC AT G C A T
Base content (bases) 600 981 323 277 400 581
Base content per 1 kb (bases) 380 620 204 175 253 367
Base content (%) 38.0% 62.0%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 281 400 201 80 196 204
Base content per 1 kb (bases) 413 587 295 117 288 300
Base content (%) 41.3% 58.7%
ATP8 (size: 192 bases) GC AT G C A T
Base content (bases) 82 110 68 14 43 67
Base content per 1 kb (bases) 427 573 354 73 224 349
Base content (%) 42.7% 57.3%
COX1 (size: 1554 bases) GC AT G C A T
Base content (bases) 660 894 390 270 467 427
Base content per 1 kb (bases) 425 575 251 174 301 275
Base content (%) 42.5% 57.5%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 268 416 167 101 192 224
Base content per 1 kb (bases) 392 608 244 148 281 327
Base content (%) 39.2% 60.8%
COX3 (size: 786 bases) GC AT G C A T
Base content (bases) 341 445 227 114 236 209
Base content per 1 kb (bases) 434 566 289 145 300 266
Base content (%) 43.4% 56.6%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 496 644 346 150 301 343
Base content per 1 kb (bases) 435 565 304 132 264 301
Base content (%) 43.5% 56.5%
ND1 (size: 957 bases) GC AT G C A T
Base content (bases) 399 558 280 119 268 290
Base content per 1 kb (bases) 417 583 293 124 280 303
Base content (%) 41.7% 58.3%
ND2 (size: 1044 bases) GC AT G C A T
Base content (bases) 395 649 311 84 285 364
Base content per 1 kb (bases) 378 622 298 80 273 349
Base content (%) 37.8% 62.2%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 144 202 101 43 99 103
Base content per 1 kb (bases) 416 584 292 124 286 298
Base content (%) 41.6% 58.4%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 544 834 396 148 405 429
Base content per 1 kb (bases) 395 605 287 107 294 311
Base content (%) 39.5% 60.5%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 120 177 82 38 94 83
Base content per 1 kb (bases) 404 596 276 128 316 279
Base content (%) 40.4% 59.6%
ND5 (size: 1821 bases) GC AT G C A T
Base content (bases) 752 1069 560 192 503 566
Base content per 1 kb (bases) 413 587 308 105 276 311
Base content (%) 41.3% 58.7%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 200 328 160 40 104 224
Base content per 1 kb (bases) 379 621 303 76 197 424
Base content (%) 37.9% 62.1%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.98%)
Alanine (Ala, A)
n = 16 (7.08%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 26 (11.5%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 12 (5.31%)
Leucine (Leu, L)
n = 44 (19.47%)
Isoleucine (Ile, I)
n = 21 (9.29%)
Methionine (Met, M)
n = 15 (6.64%)
Proline (Pro, P)
n = 16 (7.08%)
Phenylalanine (Phe, F)
n = 13 (5.75%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 5 (2.21%)
Lysine (Lys, K)
n = 5 (2.21%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 12 11 7 5 15 1 9 7 1 3 3 3 3 7 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 4 9 3 0 1 5 3 0 5 6 5 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 12 0 2 1 4 0 2 4 1 1 0 7 6 4 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 0 0 1 4 1 0 1 3 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
41 61 83 42
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 65 35 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 75 86 49
ATP8 (size: 192 bases)
Amino acid sequence: MPQLDTSTWLLTILSMMFTLFALLQLKISKHLYSPSPKPMFTKTQEQQAPWNHTWTKIYLPLS*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (3.17%)
Serine (Ser, S)
n = 6 (9.52%)
Threonine (Thr, T)
n = 8 (12.7%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 11 (17.46%)
Isoleucine (Ile, I)
n = 3 (4.76%)
Methionine (Met, M)
n = 4 (6.35%)
Proline (Pro, P)
n = 6 (9.52%)
Phenylalanine (Phe, F)
n = 3 (4.76%)
Tyrosine (Tyr, Y)
n = 2 (3.17%)
Tryptophan (Trp, W)
n = 3 (4.76%)
Aspartic acid (Asp, D)
n = 1 (1.59%)
Glutamic acid (Glu, E)
n = 1 (1.59%)
Asparagine (Asn, N)
n = 1 (1.59%)
Glutamine (Gln, Q)
n = 5 (7.94%)
Histidine (His, H)
n = 2 (3.17%)
Lysine (Lys, K)
n = 5 (7.94%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
0 3 2 1 5 3 0 1 5 0 0 0 0 0 1 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 0 1 1 0 0 0 0 0 0 4 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 5 1 0 4 2 0 0 0 1 1 0 1 0 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 0 1 0 1 4 1 0 0 0 0 0 0 0 1 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 22 21 17
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 22 18 21
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 24 28 5
COX1 (size: 1554 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 48 (9.28%)
Alanine (Ala, A)
n = 40 (7.74%)
Serine (Ser, S)
n = 33 (6.38%)
Threonine (Thr, T)
n = 37 (7.16%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 39 (7.54%)
Leucine (Leu, L)
n = 60 (11.61%)
Isoleucine (Ile, I)
n = 38 (7.35%)
Methionine (Met, M)
n = 29 (5.61%)
Proline (Pro, P)
n = 29 (5.61%)
Phenylalanine (Phe, F)
n = 43 (8.32%)
Tyrosine (Tyr, Y)
n = 18 (3.48%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.9%)
Glutamic acid (Glu, E)
n = 10 (1.93%)
Asparagine (Asn, N)
n = 20 (3.87%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 16 (3.09%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 21 22 8 5 28 5 12 7 1 10 6 17 6 18 25
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 1 0 11 11 18 0 10 14 16 8 15 6 7 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 22 1 8 7 14 1 0 3 9 9 5 2 8 12 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 8 2 7 8 8 0 2 1 5 0 0 1 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
152 107 136 123
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
78 136 95 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
40 147 196 135
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 19 (8.37%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 34 (14.98%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 6 9 3 2 17 3 8 5 3 4 3 4 2 5 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 2 0 2 3 4 0 2 2 2 2 4 5 4 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 11 0 5 3 7 0 0 3 6 3 0 1 2 6 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 3 5 6 4 1 0 2 3 1 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
55 58 67 48
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 56 62 86
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 53 95 58
COX3 (size: 786 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.66%)
Alanine (Ala, A)
n = 14 (5.36%)
Serine (Ser, S)
n = 21 (8.05%)
Threonine (Thr, T)
n = 24 (9.2%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (4.98%)
Leucine (Leu, L)
n = 35 (13.41%)
Isoleucine (Ile, I)
n = 16 (6.13%)
Methionine (Met, M)
n = 10 (3.83%)
Proline (Pro, P)
n = 12 (4.6%)
Phenylalanine (Phe, F)
n = 23 (8.81%)
Tyrosine (Tyr, Y)
n = 11 (4.21%)
Tryptophan (Trp, W)
n = 12 (4.6%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.07%)
Asparagine (Asn, N)
n = 7 (2.68%)
Glutamine (Gln, Q)
n = 7 (2.68%)
Histidine (His, H)
n = 17 (6.51%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 9 8 10 8 8 3 6 6 1 1 6 6 0 9 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 4 7 3 0 7 7 4 2 2 4 5 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 12 0 4 2 10 1 2 2 7 4 1 0 2 5 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 1 2 1 1 1 1 1 3 0 0 0 0 1 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 70 63 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 67 56 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 90 90 68
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 24 (6.33%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 28 (7.39%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.75%)
Leucine (Leu, L)
n = 63 (16.62%)
Isoleucine (Ile, I)
n = 39 (10.29%)
Methionine (Met, M)
n = 13 (3.43%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 24 (6.33%)
Tyrosine (Tyr, Y)
n = 17 (4.49%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 31 11 7 12 30 6 8 7 1 1 8 6 3 11 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 3 0 3 5 15 1 5 8 10 1 2 9 12 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 15 1 2 8 8 0 1 4 6 11 0 0 5 11 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 6 0 2 8 9 0 2 1 5 0 1 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
82 105 111 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 93 77 157
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 148 155 62
ND1 (size: 957 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.09%)
Alanine (Ala, A)
n = 29 (9.12%)
Serine (Ser, S)
n = 20 (6.29%)
Threonine (Thr, T)
n = 22 (6.92%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 12 (3.77%)
Leucine (Leu, L)
n = 57 (17.92%)
Isoleucine (Ile, I)
n = 25 (7.86%)
Methionine (Met, M)
n = 22 (6.92%)
Proline (Pro, P)
n = 22 (6.92%)
Phenylalanine (Phe, F)
n = 21 (6.6%)
Tyrosine (Tyr, Y)
n = 9 (2.83%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 14 (4.4%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 5 (1.57%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 17 18 5 10 26 3 12 5 1 1 2 7 2 9 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 1 4 10 14 1 2 6 4 1 6 10 6 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 12 0 5 8 6 0 0 1 4 5 0 1 4 10 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 8 3 1 2 7 1 0 1 7 0 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 85 92 74
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 92 57 137
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 103 141 57
ND2 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 19 (5.48%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 49 (14.12%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 63 (18.16%)
Isoleucine (Ile, I)
n = 35 (10.09%)
Methionine (Met, M)
n = 31 (8.93%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 13 (3.75%)
Glutamine (Gln, Q)
n = 12 (3.46%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 12 (3.46%)
Arginine (Arg, R)
n = 3 (0.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 16 27 7 14 33 2 7 12 0 1 3 4 0 6 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 5 9 5 0 1 3 8 1 7 4 9 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 25 0 5 9 7 0 0 2 6 3 1 0 3 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 1 0 2 12 0 0 1 2 0 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
46 97 142 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
28 109 59 152
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 105 163 70
ND3 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 19 (5.48%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 49 (14.12%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 63 (18.16%)
Isoleucine (Ile, I)
n = 35 (10.09%)
Methionine (Met, M)
n = 31 (8.93%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 13 (3.75%)
Glutamine (Gln, Q)
n = 12 (3.46%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 12 (3.46%)
Arginine (Arg, R)
n = 3 (0.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 16 27 7 14 33 2 7 12 0 1 3 4 0 6 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 5 9 5 0 1 3 8 1 7 4 9 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 25 0 5 9 7 0 0 2 6 3 1 0 3 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 1 0 2 12 0 0 1 2 0 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
46 97 142 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
28 109 59 152
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 105 163 70
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 31 (6.77%)
Serine (Ser, S)
n = 35 (7.64%)
Threonine (Thr, T)
n = 40 (8.73%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 97 (21.18%)
Isoleucine (Ile, I)
n = 41 (8.95%)
Methionine (Met, M)
n = 36 (7.86%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 20 (4.37%)
Tyrosine (Tyr, Y)
n = 17 (3.71%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 20 (4.37%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 20 30 13 22 38 4 17 10 1 1 2 7 0 11 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 2 1 6 11 14 0 5 5 7 1 8 10 5 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 17 2 6 7 11 1 1 9 7 10 3 3 7 13 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 7 1 0 3 9 2 1 2 7 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
70 133 158 98
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
54 119 82 204
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 144 189 102
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 8 (8.16%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 5 7 3 4 4 4 7 2 0 1 1 4 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 3 0 5 3 0 2 1 1 0 0 0 1 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 1 0 2 3 2 0 0 0 0 3 0 1 2 4 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
22 22 29 26
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
8 22 18 51
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 38 36 17
ND5 (size: 1821 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 43 (7.1%)
Serine (Ser, S)
n = 45 (7.43%)
Threonine (Thr, T)
n = 58 (9.57%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 12 (1.98%)
Leucine (Leu, L)
n = 101 (16.67%)
Isoleucine (Ile, I)
n = 53 (8.75%)
Methionine (Met, M)
n = 41 (6.77%)
Proline (Pro, P)
n = 30 (4.95%)
Phenylalanine (Phe, F)
n = 44 (7.26%)
Tyrosine (Tyr, Y)
n = 17 (2.81%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 10 (1.65%)
Asparagine (Asn, N)
n = 36 (5.94%)
Glutamine (Gln, Q)
n = 18 (2.97%)
Histidine (His, H)
n = 13 (2.15%)
Lysine (Lys, K)
n = 22 (3.63%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
23 30 37 9 24 42 8 16 18 0 3 2 6 1 15 29
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 2 2 5 29 9 0 1 11 13 2 10 15 4 1 17
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 21 1 5 16 13 2 2 7 8 9 2 2 13 23 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 3 3 8 20 2 2 5 2 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
103 153 219 132
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
61 167 128 251
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
28 240 219 120
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (16.0%)
Alanine (Ala, A)
n = 7 (4.0%)
Serine (Ser, S)
n = 13 (7.43%)
Threonine (Thr, T)
n = 7 (4.0%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 28 (16.0%)
Leucine (Leu, L)
n = 20 (11.43%)
Isoleucine (Ile, I)
n = 14 (8.0%)
Methionine (Met, M)
n = 8 (4.57%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 14 (8.0%)
Tyrosine (Tyr, Y)
n = 7 (4.0%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 3 (1.71%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 1 (0.57%)
Lysine (Lys, K)
n = 2 (1.14%)
Arginine (Arg, R)
n = 1 (0.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 1 4 4 0 0 1 10 0 1 15 1 3 9 14 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 2 0 6 0 0 1 11 0 7 10 3 0 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 3 1 2 0 2 3 6 0 6 1 1 5 3 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 3 6 3 0 1 1 0 0 0 1 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
75 11 40 50
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 24 27 84
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
44 5 37 90
Total protein-coding genes (size: 11408 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 215 (5.66%)
Alanine (Ala, A)
n = 253 (6.66%)
Serine (Ser, S)
n = 262 (6.89%)
Threonine (Thr, T)
n = 334 (8.79%)
Cysteine (Cys, C)
n = 22 (0.58%)
Valine (Val, V)
n = 173 (4.55%)
Leucine (Leu, L)
n = 637 (16.76%)
Isoleucine (Ile, I)
n = 315 (8.29%)
Methionine (Met, M)
n = 239 (6.29%)
Proline (Pro, P)
n = 204 (5.37%)
Phenylalanine (Phe, F)
n = 240 (6.31%)
Tyrosine (Tyr, Y)
n = 124 (3.26%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 67 (1.76%)
Glutamic acid (Glu, E)
n = 91 (2.39%)
Asparagine (Asn, N)
n = 159 (4.18%)
Glutamine (Gln, Q)
n = 97 (2.55%)
Histidine (His, H)
n = 97 (2.55%)
Lysine (Lys, K)
n = 94 (2.47%)
Arginine (Arg, R)
n = 64 (1.68%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
142 173 192 80 117 257 44 116 86 11 41 37 68 27 110 130
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
47 14 8 54 102 93 4 49 62 75 29 64 76 61 3 61
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
106 159 8 47 70 86 8 15 36 62 62 13 23 58 101 30
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
67 70 21 23 44 83 11 8 16 38 2 1 1 5 4 91
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
799 960 1194 849
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
458 1002 738 1604
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
256 1207 1481 858

>NC_005280.1 Phocoena phocoena mitochondrion, complete genome
GTTAATGTAGCTTAAACTTTCAAAAAGCAAGACACTGAAAATGTCTAGATGGCTTATCGCCCCATCAACA
CAAAGGTTTGGTCCTGGCCTTTCTATTAGTTCTTAGCAGCCTTACACATGCAAGCATCCGCATCCCAGTG
AGAATGCCCTTCAAATCATAAAGACCAAGAGGAGCAGGCATCAAGCACACTATATTAGTAGCTCATAACG
CCTTGCTTAGCCACACCCCCACGGGAGACAGCAGTGACAAAAATTAGGCTATGAACGAAAGTTTGACCTA
GCCATGCTAATTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTGACCCAAGTTAATAGA
CACCCGGCGTAAAGAGTGTCGAGGAGTAACATAAAATAAAGTCAAATCTTAGTTAAGCTGTAAAAAGCCA
TAACTAAACCTAAGCTAAACCACGAAAGTAACTTTATCACAAACCGAGTACACGACAACTAAGACCCAAA
CTGGGATTAGATACCCCACTATGCCTAGTCGTAAACCTAAATAGTCCTAAAACAAGACTATTCGCCAGAG
TACTATCGGCAACAGCCCAAAACTCAAAGGACTTGGCGGTGCTTCATATCCTTCTAGAGGAGCCTGTTCT
GTAAACGATAAACCACGATCAACCTCACCAACCCTTGCTACTTCAGTCTATATACCGCCATCTTCAGCAA
ACCCTAAAAAGGAACGAAAGTAAGCACAACTATCACACATAAAAACGTTAGGTCAAGGTGTAACCTATGG
GTTGGGAAGAAATGGGCTACATTTTCTATACAACAAGAACACCCCTTAAACTTACACGAAAGTCTTTATG
AAACCTAAAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGAATGCTTAATTGAATAAGGCCATGAA
GCACGCACACACCGCCCGTCACCCTCCTCAAGTATCACAGCAGAGCCTTAGATTACTAATCCCTGCTAAG
CAAGCATACAAGAGGAGACAAGTCGTAACAAGGTAAGCATACCGGAAGGTGTGCTTGGATAAAACAAGAT
GTAGCTTAAACAAAGCATCTAGTTTACACCTAGAAGATTCCACAACTCGTGCACATCTTGAACTATACCT
AGCCCACCCCCTCCCCATTACTACTATCATAGATTAATTAATTAAAACATTCACCACGCGTTTTAAAGTA
TAGGAGATAGAAATTTAATCATCAGTGGCGCTATAGAGAAAGTACCGTAAGGGAAAGATGAAAGACCTAA
TTAAAGTAAAAAAAAGCAAAGCTTACCCCTTGTACCTTTTGCATAATGACTTAACTAGCAATAATTTAGC
AAAGAGACCTTAAGTTAAAACACCCGAAACCAGACGAGCTACTTACAAGCAGTAACTAGGACAAACTCAT
CTATGTGGCAAAATAGTGAGAAGACTTATAAGTAGAGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGT
TGTCCAAAAAAGGAATTTCAGTTCAACATTAAACAATGCTAAGAACCCCATCAAGTCTCAACGTATGTTT
AACTGTTAGTCTAAAAAGGTACAGCTTTTTAGAAACGGATACAACCTTTACTAGAGAGTAATATAAGACT
TAAACCATAGTTGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACAACAAAAATAAGTCT
TAATCCCAAGAATAAATAAACAACTCCTAGCCTAACTATTGGACTAATCTATTTAATTATAGAAGCAATA
CTGTTAATATGAGTAACAAGAAAGATTTTCTCCTCGCACAAGCTTACATCAGTAGCTGATAATATGCTGA
TAATTAACAGTTAATAAATACAACCCAACACTAAATTATTTATTAAACACACTGTTAACCCAACACAGGC
GTGCACTAAGGAAAGATTAAAAAAAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAA
CATCACCTCTAGCATAGCCAGTATTAGAGGCACTGCCTGCCCAGTGACTTAATCGTTAAACGGCCGCGGT
ATCTTGACCGTGCAAAGGTAGCATAATCACTTGTTCTCTAAATAAGGACTTGTATGAATGGCCACACGAG
GGTTTTACTGTCTCTTACTTTTAATCAGTGAAATTGACCTCCCCGTGAAGAGGCGGGGATAATAAAATAA
GACGAGAAGACCCTATGGAGCTTTAATTAATCAACTCAAAAAAATCGTAAAACAGTACCACTAAGGGATA
ACAAAATTTTATATGGGTTGACAATTTCGGTTGGGGTGACCTCGGAGTATAAAAAACCCTCCGAGTGATT
AAAACCTAGGCCTACTAGCCAAAGTGTAGCATCACTTATTGATCCAAATTTTTGATCAACGGAACAAGTT
ACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCGTATCGACAATAGGGTTTACGACCTCGATGTTG
GATCAGGACATCCTGATGGTGCAGCAGCTATCAAGGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGAT
CTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTATTACGCATTTCTCCCAGTACGAAAGGACAA
GAGAAATAAGGCCAACTTCAAAAAAGCGCCTTTAAATAATTAGTGATTCAATCTTAACCTAATAAACTAG
CGCAAATATACTATGCCCAAAATCAGGGCTTTGTTGGGGTGGCAGAGTACGGCAATTGCATAAAACTTAA
GCCTTTATATCCAGAGGTTCAAATCCTCTCCTCAACAAATGTTTATAATTAACATTTTAATACTCATCCT
CCCCATCCTCTTAGCCGTAGCTTTTCTTACATTAGTCGAACGCAAAATCCTAGGCTACATGCAACTCCGA
AAGGGGCCAAACATCGTAGGCCCATATGGCCTTTTACAACCTTTTGCCGACGCAATCAAACTATTTACTA
AAGAACCCTTACGACCAGCCACATCCTCTACCACTATATTCATCATCGCACCTGTACTCGCACTAACCCT
GGCTCTCACCATATGAATTCCTCTACCCATACCCCACCCCCTCATCAACATAAACCTAGGAGTGCTATTC
ATACTAGCAATGTCTAGCCTAGCCGTCTACTCCATTCTATGATCCGGATGAGCCTCCAACTCAAAATATG
CTCTAATTGGAGCATTACGAGCAGTAGCACAGACAATCTCATACGAAGTGACATTAGCCATTATCCTACT
GTCAGTACTCTTAATAAACGGCTCTTTCACCCTATCCACACTAAATACTGCACAAGAAAAATTATGACTA
CTTTTCCCCTCATGACCATTGGCCATAATATGATTTATCTCCACCCTAGCAGAAACTAACCGAGCCCCTT
TTGATCTTACAGAAGGAGAGTCAGAGCTCGTATCTGGTTTCAATGTAGAGTATGCAGCAGGTCCCTTCGC
CCTGTTTTTCCTAGCAGAATACGCCAATATCATCATAATAAACATATTCACAACTATCTTATTCCTAGGC
GCATTCCATAACCCCCACATGCCAGAACTATGCACAATAAATCTAATCATCAAATCTCTACTATTAACAA
TATCCTTCCTATGAATTCGAGCATCCTACCCTCGATTTCGATATGACCAATTAATACACCTACTCTGAAA
AAACTTTCTTCCACTAACACTAGCTTTCTGTATATGACATGTTTCACTACCCATCATAACAGCGGGCATT
CCTCCCCAAACATAGGCCTAAGAAATATGTCTGACAAAAGAATTACTTTGATAGAGTAAATAATAGAGGT
TTAAGCCCTCTTATTTCTAGAATAATAGGAATCGAACCTACCCCTGAGAATTCAAAATTCTCCGTGCTAC
CATATCACACCATAATCTATAGTAAGGTCAGCTAATTAAGCTATCGGGCCCATACCCCGAAAATGTTGGT
TCATACCCTTCCCATACTAATTAACCCACTCATTTTCATTACCCTGCTAACAACTCTAATCCTAAGCACA
ATAATTGTAATAATTAGCTCTCACTGACTATTCGCCTGAATCGGATTAGAAATAAACATGATAGCTATCA
TCCCTATCATAATAAAAAAACCATCTCCTCGAGCCACAGAGGCCTCAGCCAAATACTTTCTAACACAAGC
CACAGCATCCACACTACTCATACTAGCAGTCACCATTAACCTAACACACTCTGGCCAATGAACCATCATA
AAACTATTCGACCCAACAGCATCCATTCTGATAACAATAGCTCTAGCTATTAAACTAGGATTATCCCCTT
TCCACTTTTGAGTACCAGAAGTTACACAAGGCATCCCTCTAACCACAGGACTAATCCTTCTTACATGACA
AAAAATTGCACCCATTTCAATCCTCTATCAAATCTCACCATCAATCAATCTACACCTAATAATTACTATG
TCCTTCCTATCCATTCTCATTGGAGGCTGGGGGGGACTAAACCAAACACAACTTCGAAAAGTCATAGCCT
ATTCATCAATTGCCCATATAGGATGAATAACCACCATCCTACTATATAACTCAACCCTTACTTTACTAAA
CCTATTAGTCTATATTATTATAACTTTCACTATGTTTATATTACTTATCCAAAACTCCACCACCACTACA
CTACTCCTATCCCAAACATGAAATACAATACCTGTAATAACAACCTTCACTATACTCACCCTACTCTCTA
TAGGTGGACTCCCCCCACTCACAGGATTTATGCCCAAATGAATAATCATCCAAGAACTAACAAAAAATGA
CACCCTCATCTTACCAACCCTTATAGCTATTACAGCCCTACTCAACCTATATTTCTACATACGCCTTGCC
TACTCCACAGCTCTAACTCTATTCCCTTCTACCAACAACATAAAAATAAAATGACAATTTCACCCCACAA
AACAAATAACCCTCTTACCAACAGCAATTGTACTATCCACTATACTCCTACCTCTCACACCAACATATTT
TATTCTACTATAGGGGTTTAGGTTAAATCAGACCAAGAGCCTTCAAAGCCCTAAGCAAGTATAATCTTAC
TTAACCCCTGCTCAATAAGGATTGCAAGACCATATCTCACATCAATTGAATGCAAATCAAACACTTTAAT
TAAGCTAAATCCTCACTAGATTGGAGGGATACATCTCCCACGAACTTTTAGTTAACAGCTAAATACCCTA
GTCAACTGGCTTCAATCTACTTCTCCCGCCGCGAGAAAAAAAAGGCGGGAGAAGTCCCGGCAGGATTGAA
GCTGCTTCTTTGAATTTGCAATTCAAAATGATTACTCACTACAGGACCTAGTAAAAGGGGGACTTTTACC
CCCGTCTTTAGATTTACAGTCTAATGCCTACTCGGCCATTTTACCTATGTTCATAAACCGATGACTATTC
TCTACCAACCACAAAGACATTGGTACTCTATACCTACTATTTGGCGCCTGGGCAGGAATAGTAGGTACAG
GCCTAAGCTTATTAATCCGCGCTGAATTAGGTCAACCTGGCTCACTTATCGGAGATGACCAAATCTATAA
TGTACTAGTAACAGCTCACGCTTTCGTGATAATCTTCTTTATAGTAATGCCCATTATAATCGGGGGATTT
GGGAACTGACTAGTTCCTTTGATAATCGGAGCTCCTGATATAGCATTCCCTCGTCTAAACAACATGAGCT
TCTGACTACTTCCTCCCTCTTTCCTATTACTAATAGCATCCTCCGTAGTTGAAGCTGGCGCAGGCACAGG
CTGAACCGTATATCCCCCTCTAGCAGGGAATCTAGCACACGCAGGAGCCTCAGTGGATCTCACCATCTTC
TCCCTACATCTAGCCGGAGTATCTTCAATCCTTGGGGCTATTAACTTCATCACAACTATCATTAACATAA
AACCACCTGCTATAACCCAGTACCAAACACCCCTTTTCGTGTGATCAGTCCTAGTTACGGCAGTATTACT
CTTATTATCATTACCTGTCCTAGCAGCCGGTATTACTATACTACTGACCGACCGAAATCTAAATACAACT
TTCTTTGACCCTGCAGGAGGGGGCGATCCTGTCCTATATCAACACTTATTCTGGTTTTTTGGCCACCCTG
AAGTGTATATTCTAATTCTACCCGGTTTCGGAATAATCTCGCACATCGTAACATACTATTCAGGAAAAAA
AGAGCCTTTTGGGTATATAGGGATGGTATGAGCTATGGTCTCTATCGGTTTCCTAGGTTTTATCGTGTGG
GCCCATCACATATTTACAGTTGGAATAGACGTAGATACACGAGCATACTTTACATCAGCCACTATAATCA
TTGCTATCCCTACAGGAGTAAAAGTCTTTAGCTGACTGGCAACACTTCATGGAGGAAATATCAAATGATC
TCCCGCCCTAATATGGGCCCTGGGCTTTATTTTCCTATTCACAGTGGGTGGTTTAACTGGTATTATCCTG
GCTAACTCATCCCTAGATGTTATCCTTCACGATACCTACTACGTAGTTGCCCATTTCCACTTTGTCCTTT
CAATGGGGGCTGTTTTCGCCATTATAGGAGGCTTTGTTCACTGATTCCCACTATTTTCAGGCTATACACT
CAACTCAACATGAACAAAAATCCAATTTGCAATTTTATTCGTAGGCGTAAATATAACATTCTTCCCACAA
CACTTCCTTGGCTTATCTGGAATGCCTCGTCGATACTCCGACTACCCAGACGCCTATACAACATGAAATA
CCATTTCATCAATAGGCTCTTTCATCTCCCTGACAGCAGTTATACTAATAATTTTCATTATTTGAGAAGC
ATTTGCATCCAAACGAGAAGTATCAGCAGTAGACCTCACCTCTACAAACCTCGAATGGTTGAACGGATGT
CCTCCGCCATACCATACATTTGAGGAACCAGCATATGTTAACCCAAATATTCAAGAAAGGAAGGAGTCGA
ACCCTCTCTAGTCGGTTTCAAGCCAACAGCATAACCTTTATGTCTTTCTTTACGAGCGAGATATTAGTAA
AATCTTACATAACTTTGTCAAAGTTAAGTCACAAGTGGAAATCTTGTATATCTCCATGGCATATCCCTTT
CAACTAGGCTTACAAGATGCTACATCACCTGTCATAGAAGAACTACTGCAATTTCATGATCACGCACTAA
TGATTGTCTTCCTAATCAGCTCCCTAGTTCTATATATTATTACACTGATGCTTACAACTAAACTAACTCA
TACCAACACAATAGACGCCCAAGAAGTAGAGACAATTTGAACTATTCTCCCAGCCATTATCTTAATTACA
ATTGCTCTACCCTCTCTACGCATTCTCTACATAATAGACGAAATTAACAACCCCTCCTTGACCGTAAAGA
CAATGGGGCACCAATGATACTGAAGCTATGAATACACTGACTATGAAGACCTAAATTTTGACTCTTATAT
GATCCCAACCTCAGATTTAAAACCAGGAGAACTTCGACTATTAGAAGTAGATAATCGGGTGGTTTTACCT
ATACAGATAACAATCCGAATACTAGTCTCCTCAGAAGATGTGCTGCACTCATGAGCCGTTCCCTCTCTAG
GCTTAAAAACAGACGCAATTCCTGGGCGCCTAAACCAGACAACCCTAATATCAACACGACCTGGTCTATT
TTATGGACAGTGTTCAGAAATCTGTGGTTCAAACCATAGCTTCATACCAATCGTTCTTGAATTAGTACCC
CTAGAGAACTTTGAGAAATGATCTGCATCTATGTTATAACCTCATTAAGAAGCTAGGCTAGCGTTAACCT
TTTAAGTTAAAGATTGGGAGCTACACATTCCCCTTAATGACATGCCACAACTAGACACATCCACATGACT
CCTAACAATCCTCTCCATGATATTTACTCTCTTCGCATTACTCCAACTAAAAATCTCAAAACACCTCTAC
TCCCCCTCCCCCAAGCCAATATTCACTAAAACACAAGAGCAACAAGCCCCCTGAAACCACACATGAACGA
AAATCTATTTGCCCCTTTCATAGTCCCAGTAATACTGGGCATCCCCATCACCACCCTAATTATCATATTT
CCCACCCTATTATTCCCAACACCAAACCGACTAATCAGTAATCGAACAGTCGCTATCCAACAATGATTGA
CTAAACTCACATCAAAGCAGCTAATAATTACACACAACCCCAAAGGACAAACCTGATCTCTCATGCTTAT
TTCACTTTTCTTGTTCATTGCCTCTACAAATCTTCTTGGAATAATACCCCACTCATTTACACCTACCACC
CAACTCTCAATAAATCTAGGCATGGCTATCCCTTTATGAGCTGGCGCCGTTGTTATAGGCTTTCGCAATA
AAACAAAAATATCCTTGGCCCACCTCTTACCACTAGGTACCCCTACCTTTCTAATCCCTATGTTAGTTAT
AATTGAAACTATTAGCCTATTTATTCAACCCTTGGCCTTAGCAGTGCGATTAACAGCCAACATCACAGCA
GGCCACCTATTATTACACCTAATTGGAAGTGCAACCCTTGTACTAACAAGCATCAGCCCACCCATAGCCC
TCATTACATTCACCATCCTTACCTTGCTAGTCATCCTTGAATTCGCCGTGGCCTTAATCCAAGCTTATGT
ATTTACCCTACTAGTGAGCTTGTACTTGCAAGACAATACATAATGACCCACCAAACCCACTCATATCATA
TAGTAAACCCCAGTCCTTGGCCCCTTACAGGAGCCCTCTCAGCATTCCTTATAACATCAGGCTTAATCAT
ATGATTCCACTTCAACTCAATAATTCTGCTAACCCTGGGCCTACTTACAAACACTCTAACAATGTACCAG
TGATGACGAGATATTATTCGAGAAAGCACCTTCCAAGGCCATCATACCCCAACCGTCCAAAAGGGGCTTC
GATATGGTATAATCTTATTTATTTTATCAGAAGTCCTATTCTTCACAGGCTTCTTTTGAGCTTTTTACCA
CTCAAGTCTTGCCCCCACCCCTGAGCTAGGTGGTTCTTGACCACCAGCAGGCATCCACCCCTTAAATCCA
CTAGAAGTCCCACTCCTCAACACCTCTGTACTACTAGCCTCCGGTGTATCCATTACTTGAGCCCACCATA
GCCTTATAGAAGGTAATCGCAAACATACACTCCAAGCCCTCCTTATCACAATTATACTTGGCCTTTATTT
TACCCTCCTTCAAGCATCAGAATACTATGAAGCTCCGTTTACAATCTCAGATGGGGTCTACGGATCTACA
TTTTTTGTAGCCACAGGTTTCCACGGATTACATGTCATCATCGGATCGACTTTCCTCATTATCTGCTTTA
TACGTCAACTGACATTCCACTTCACATCAAACCATCACTTTGGCTTCGAAGCCGCTGCTTGATATTGACA
CTTCGTAGACGTTGTCTGATTATTCCTCTATGTATCTATCTATTGATGAGGTTCATAGTCCTTTTAGTAT
TAAGTAGTACAACTGACTTCCAATCAGTTAGTTTCGGTCTACCCCGAAAAAGAACAATAAACTTCCTACT
GGCACTGCTAACAAATACGACCCTAGCTTTACTACTTATACTCATCGCCTTTTGACTCCCCCAACTAAAT
ACATACGCAGAAAAAACTAGCCCCTACGAATGTGGTTTTGACCCAATAGGGTCTGCTCGCCTACCTTTCT
CCATAAAATTCTTCTTAGTAGCGATTACCTTTCTTCTCTTCGACCTAGAAATTGCTCTCCTACTCCCTCT
CCCCTGAGCAATTCAGACAAACAATTTAAAAACCATACTTCTAATAACCCTGTTCCTAATCTCCCTACTA
GCAGCTAGTCTGGCCTATGAATGAACCCAAAAGGGTCTAGAATGAGACAAATATGGTACTTAGTTTAAGA
TAAAATAAGTGATTTCAACTCACTAGACTGTGATTTAAACTCACAAGTACCAAATGTCTTTAATTCATAT
TAACATCCTAATAGCCTTCACTATATCTCTTGTAGGCTTATTAATATACCGATCCCACCTGATATCCGCA
TTACTCTGCTTAGAAGGTATGGTACTGTCATTGTTCATCCTGATAACCCTTACTATCCTAAATTCACACT
TCACCTTAGCCAACATAGTGCCAATCATCCTCTTAGTATTTGCAGCCTGCGAAGCAGCCATTGGACTAGC
CCTGCTAGTTATAGTCTCCAATACATACGGTACCGACTACGTACAAAACCTTAACCTCCTCCAATGCTAA
AATTTATTATCCCTACTATTATACTAATACCTCTAACCTGACTATCAAAAAGCAGTTTTATTTGAATCAA
CACCACAGCTCACAGCCTATTAATTAGCTTCACAAGCCTACTTCTACTCAACCAATTTAACGACAACACT
CTCAACTATTCCCTAATATTCTTCTCTGACCCCCTTTCTACGCCACTCTTAATATTAACAATATGACTCC
TCCCACTAATACTAATAGCAAGCCAATCCCACCTCCTAAAAGAACCCCTCACCCGAAAAAAACTTTATAT
CACAATGCTAGTTATATTACAAGCCCTTTTGATCATAACCTTTACCGCCATAGAACTAATTATATTTTAT
ATTATATTTGAAGCTACACTAATTCCTACCCTTATTATCATCACCCGTTGGGGTAATCAAACAGAACGAC
TCAACGCAGGACTCTACTTCCTGTTTTACACACTTATAGGATCACTCCCCCTACTAGTAGCACTAACATA
TCTACAAAATACACTGGGCACTCTCAACTTTCTATTATTACAGTACTGAACCCAACCACTACCTACATCA
TGGTCTAATATTTTCATGTGATTAGCTTGCATAATGGCCTTTCTAGTAAAAATACCCCTCTATGGTCTTC
ATCTCTGACTACCAAAAGCACACGTAGAGGCCCCTATTGCAGGTTCAATAGTACTTGCAGCCGTATTATT
AAAACTCGGAGGCTATGGCATACTACGAATCACATCAATTCTCAACCCCTTGACAGGACATATAGCCTAC
CCTTTCCTCGCACTATCCTTGTGAGGAATAATTATAACTAGCTCTATTTGTCTACGCCAAACAGACCTAA
AGTCATTAATCGCATACTCCTCAGTCAGCCACATAGCACTCGTCATCGCAGCCATTCTCATCCAAACTCC
TTGAAGCTACATGGGGGCCACCGCTTTAATAATCGCCCATGGTCTTACGTCCTCCATACTATTCTGTCTG
GCAAATTCAAATTACGAACGAATTCACAGCCGAACTATAATTTTAGCACGAGGCCTACAAATCTTCTTTC
CACTAATAGCTACTTGATGATTACTAGCATCTCTAACAAACCTAGCCCTACCCCCTACCATCAATCTGAT
TGGAGAATTACTCGTAATTATATCAACTTTCTCATGGTCAAACCTCACCATTATTCTTATGGGAGCAAAC
ATCGTAATCACAGCCCTCTATTCCTTATACATATTAATCATAACACAACGCGGTAAGTACACCCACCATA
TCAACAATCTTATCCCCTCTTTTACACGAGAACACACTCTAATAGCTTTACACATAATCCCCCTTCTACT
CCTATCGCTAAACCCCAAAATCATTCTAGGCCCCCTTTACTGTAAGTATAGTTTAAAAAGAACATTAGTC
CGTGAAGCTAAAAACAGAAGGCAAAACTTCTTACTTACCGAAAAAGTACTGCAAGAACTGCTAATTCATG
CTCTCCACACCTAACAATGTGGCTTTTTCGAACTTTTAAAGGATGGTAGTTATCCGTTGGTCTTAGGAAC
CAAAAACTTGGTGCAACTCCAAATAAAAGTAATAAACTTATTCACCTCCTCCACCTTACTCATACTACTC
ATACTAATCGCCCCCGTTATAGCATCTAGTACAAACCTCTATAAAACCAACGACTATCAACACTACGTAA
AAAATATAACCATATCAGCCTTCATCATTAGCCTGATCCCCACAACTATGTTTATTCACACAAATCAAGA
CGTACTTATCTCGAACTGGCACTGAATTACTATTCACACCTTCAAACTAACCCTCAGCTTTAAAATAGAC
TACTTCTCACTCATATTTATACCTGTAGCATTATTTATTACATGGTCAATTATAGAGTTCTCAATATGAT
ATATATACTCTGACCCTAACATTAACCAATTCTTCAAATATCTACTCATTTTCCTGATCACCATACTCAT
TCTAGTCACAGCCAATAACCTCTTCCAACTATTTATTGGATGAGAAGGAGTGGGCGTTATATCTTTCTTA
TTAATTGGCTGATGATTTGGACGAACAGACGCCAACACAGCCGCCCTCCAAGCAATCTTGTATAACCGCA
TTGGAGATATTGGATTTCTTCTATCCATAGCCTGATTCCTATCCAACACAAACTCATGAGACCTACAACA
AATATTCATACTCAACCAAAATCCCTCAAACCTCCCTCTCATAGGACTTACACTAGCCGCAGCTGGTAAA
TCAGCCCAATTTGGACTACATCCCTGACTACCCTCAGCAATAGAGGGCCCCACCCCAGTCTCAGCTCTAC
TCCACTCAAGCACTATGGTTGTAGCAGGGATCTTCCTACTTATCCGCTTCTCCCCCTTAATAGAAAACAA
TAAGCTCATCCAAACAATAATACTCTCCTTAGGCGCCCTTACCACCTTATTCACAGCCATTTGCGCCCTG
ACCCAAAATGACATCAAAAAAATTATCGCCTTCTCCACCTCCAGCCAACTTGGCTTAATAATAGTAACTA
TAGGCCTCAATCAACCACACCTAGCATTCCTGCACATCTGTACACACGCCTTCTTTAAAGCCATGCTATT
CCTGTGCTCCGGCTCCATTATCCACAATCTAAATAACGAGCAAGACATTCGAAAAATAGGAGGACTATAC
AAAATCCTTCCCTTTACTACAACTGCCCTCATCACTGGCTGTCTCGCCCTAACAGGAACGCCGTTCCTCA
CAGGATTTTATTCCAAAGATCCCATCATTGAAGCCGCCACTTCGTCTTATACCAACGCCTGAGCCCTACT
ATTAACACTACTCGCCACCTCCCTAACAGCTATCTACAGTACTCGCATCATCTTCTTCACCTTACTAGAA
CAACCCCGTTTTCCCCCTCTCATAAACATCAATGAAACTAATCCCATACTAATTAACCCTATCAAACGCC
TACTGATCGGAAGCATTTTCGCCGGATTTATCCTCTCCAACAACATACCTCCAATAACTACCCCTCTAAT
AACTATGCCCCTACACCTAAAACTAACAGCCCTAATAGTAACAATTCTAGGCTTCACTATTGCATTCGAA
ATCAATACCTACTCAAAAAACCTAAAATATCCCCGCCTATCAAGCGCTACCAACTTCTCCGCCCTACTAG
GCTACTTCCCTGCTATCATACATCGTCTACCTCCTCACCTGATCTTAACAATAAGCCAAAAACTCGCAAC
TTCCCTACTAGATTTAGCCTGAACAGAAATTATCTTACCAAAAACTATAACCTTTATCCAACTAAAGGCC
TCCCTACTGACTTCAAACCAAAAAGGCCTTATCAAATTGTACTTCCTATCTTTCCTCATCACTATAGCCC
TTGCCATATTATTATTTAATTACCCCGGGTAATTTCCATAATAACTACAACACCAATAAATAACGACCAC
CCGGTAACAACAACCAATCAAGTACCATAACTGTATAAAGCAGCAATACCTATAGCCTCCTCACTAAAAA
GTCCAGAATCTCCTGTATCATGAATAACTCAATCCCCCAATCCATTAAACTCAAACACAAAACTCACTTC
CTCTCCTCCTAAAACACAAAGCACTACTAAAAACTCCGTGATCAGACCTAAAAGAAACCCCCCTAACACA
ACTTTATTAGAAACTCAGACTTCAGGATACTGCTCAATAGCTATAGCCGCTGTATAACCAAACACAACCA
ACATTCCCCCTAAATAAATCAAAAACACCATCAAACCTAAAAATGAACCCCCAAAACTAAAAACAATTCC
ACACCCCACAGCACCACCCACAATTAACCCTAAACCCCCATAAACAGGCGAAGGCTTCGATGAAACCCCC
ACAAGACTAATTACAAAAATAACACTTATAATAAAAACAATATATATTGTCATTATTCTCACATGGACTC
CAACCATGACCAATGACATGAAAAATCATCGTTGTTATTCAACTATAAGAACCTTAATGACCAACATCCG
AAAAACACACCCACTAATAAAAATTATCAACAATGCGCTTATCGACCTCCCCGCCCCATCAAACATCTCC
TCATGATGAAACTTTGGTTCCCTGCTGGGCCTCTGTCTAATCACACAAATCCTAACAGGCCTATTTCTAG
CAATACACTACACACCAGACACCTCAACCGCTTTTTCATCAGTCGCACATATCTGTCGAGACGTTAATTA
TGGCTGAATCATTCGTTACCTACACGCAAACGGAGCTTCCATGTTCTTCATTTGTCTTTATATCCATATC
GGACGTGGCCTATATTACGGCTCCTACATATTCCAAGAAACATGAAACATCGGGGTGCTCTTACTACTAA
CAGTCATAGCCACCGCATTTGTAGGTTATGTCTTACCCTGAGGACAAATATCATTTTGAGGTGCTACCGT
CATCACAAACCTCCTATACGCAATCCCCTATATCGGCAGCACACTAGTAGAATGAATCTGAGGAGGATTC
TCCGTAGACAAAGCAACACTAACACGCTTTTTCGCCTTCCATTTTATCCTTCCATTTATCATCACAGCAC
TAATAATCGTCCACCTACTGTTCCTTCATGAAACAGGCTCCAACAATCCCACAGGAATCCCATCTAACAT
AGACATAATCCCCTTCCACCCTTACTACACAATCAAAGACATCCTAGGTGCCCTCCTATTCATCCTAACC
CTACTAGCACTAACCTTATTTTCACCCGACCTTCTAGGAGATCCCGATAACTATACCCCAGCAAACCCAC
TAAGCACCCCAGCACACATTAAACCAGAATGATACTTCCTCTTCGCATACGCAATCCTGCGATCAATCCC
CAATAAATTAGGAGGAGTACTAGCACTATTACTCTCCATTCTCGTCCTGGTGCTCATCCCAATACTTCAG
ACCTCCAAACAACGAAGCATAATCTTCCGACCCTTTAGCCAACTCTTATTTTGAACCCTAGTCGCAGACC
TCTTAACCCTAACATGAATCGGAGGCCAACCTGTAGAACACCCATACATCATTGTGGGTCAATTAGCATC
TGTCCTATACTTCCTCCTGATCCTAGTACTAATACCAACGGCCAGTATTATTGAAAATAAACTTCTAAAA
TGAAGAGTCTTTGTAGTATATAAAATACCTCGGTCTTGTAAACCGAAAAAGGAGAACCTCACTCCTCCCT
AAGACTCAAGGAGGAGACATTCAAACCTCACCACCAACACCCAAAGCTGGAATTCTTTATAAACTACTCC
TTGAAAAAGCCCATTGTATGATTATTAAAGCACTACTGTACTATGCCAGTATTAAAATAACCCGCTCCGA
AACATCCCACTGCAACTACCATGTATGTACTCACATACTACGATCCTAGTCTTCCCCTATAAATATTTAT
GTATACATGCTATGTATTATTGTGCATTCATTTATTTTCCATACGACTATGTTAAAGCCCGTATTAAAAC
TTATTAATCTTACAAAATACATAATTTGCACGCTCTTACATATTATATCTCCACTTGTACTTCATATCCA
TTATATCCTATGGCCGCTCCATTAGATCACGAGCTTAATCACCATGCCGCGTGAAACCAGCAACCCGCTT
GGCAGGGATCCCTCTTCTCGCACCGGGCCCATAACTCGTGGGGGTAGCTAAATAATGATCTTTATAAGAC
ATCTGGTTCTTACTTCAGGACCATTTTAACTTAAAATCGCCCACTCGTTCCCCTTAAATAAGACATCTCG
ATGGACTAATGACTAATCAGCCCATGCTCACACATAACTGAGATTTCATTCATTTGGTATCTTTATTTTT
TGGGGGGGGGCCTGCATCGACTCAGCTATGGCCTTAAAAGGCCCTGTCACAGTCAGATAAATTGTAGCTG
GACCTGTGTGTATTTTTGATTGGACTAGCACAACCAACAGGTGTAATTTAATTAATGGTTACAGGACATA
TTACTCTATTATTCCCCCCGGACTCAAAAAACCCTATCTCAGGAGGCTCCAAACCCCCCCTACCCCCCAC
AAAACTAACCGTCTGCTTTAATATTCACCACCCCCTTAGACTGCTTGGTCCCTAGATATTTAAACACTTT
TTTTCAAAAATCAATACTAAATCTGACACAAGCCCCATAATGAAATCATACAGATGTTTTCCTACTCCAC
AC


Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.