Viewing data for Falco cherrug


Scientific name Falco cherrug
Common name Saker falcon
Maximum lifespan 15.90 years (Falco cherrug@AnAge)

Total mtDNA (size: 18059 bases) GC AT G C A T
Base content (bases) 8003 10056 5557 2446 4145 5911
Base content per 1 kb (bases) 443 557 308 135 230 327
Base content (%) 44.3% 55.7%
Total protein-coding genes (size: 11384 bases) GC AT G C A T
Base content (bases) 5207 6177 3864 1343 2659 3518
Base content per 1 kb (bases) 457 543 339 118 234 309
Base content (%) 45.7% 54.3%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1559 bases) GC AT G C A T
Base content (bases) 668 891 400 268 375 516
Base content per 1 kb (bases) 428 572 257 172 241 331
Base content (%) 42.8% 57.2%
Total rRNA-coding genes (size: 2581 bases) GC AT G C A T
Base content (bases) 1216 1365 722 494 505 860
Base content per 1 kb (bases) 471 529 280 191 196 333
Base content (%) 47.1% 52.9%
12S rRNA gene (size: 982 bases) GC AT G C A T
Base content (bases) 477 505 280 197 192 313
Base content per 1 kb (bases) 486 514 285 201 196 319
Base content (%) 48.6% 51.4%
16S rRNA gene (size: 1599 bases) GC AT G C A T
Base content (bases) 739 860 442 297 313 547
Base content per 1 kb (bases) 462 538 276 186 196 342
Base content (%) 46.2% 53.8%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 310 374 246 64 169 205
Base content per 1 kb (bases) 453 547 360 94 247 300
Base content (%) 45.3% 54.7%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 73 95 66 7 35 60
Base content per 1 kb (bases) 435 565 393 42 208 357
Base content (%) 43.5% 56.5%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 719 832 482 237 391 441
Base content per 1 kb (bases) 464 536 311 153 252 284
Base content (%) 46.4% 53.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 308 376 211 97 159 217
Base content per 1 kb (bases) 450 550 308 142 232 317
Base content (%) 45.0% 55.0%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 374 410 258 116 187 223
Base content per 1 kb (bases) 477 523 329 148 239 284
Base content (%) 47.7% 52.3%
CYTB (size: 1143 bases) GC AT G C A T
Base content (bases) 529 614 390 139 271 343
Base content per 1 kb (bases) 463 537 341 122 237 300
Base content (%) 46.3% 53.7%
ND1 (size: 975 bases) GC AT G C A T
Base content (bases) 458 517 338 120 248 269
Base content per 1 kb (bases) 470 530 347 123 254 276
Base content (%) 47.0% 53.0%
ND2 (size: 1040 bases) GC AT G C A T
Base content (bases) 456 584 353 103 257 327
Base content per 1 kb (bases) 438 562 339 99 247 314
Base content (%) 43.8% 56.2%
ND3 (size: 352 bases) GC AT G C A T
Base content (bases) 165 187 123 42 85 102
Base content per 1 kb (bases) 469 531 349 119 241 290
Base content (%) 46.9% 53.1%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 630 748 494 136 319 429
Base content per 1 kb (bases) 457 543 358 99 231 311
Base content (%) 45.7% 54.3%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 142 155 105 37 74 81
Base content per 1 kb (bases) 478 522 354 125 249 273
Base content (%) 47.8% 52.2%
ND5 (size: 1818 bases) GC AT G C A T
Base content (bases) 802 1016 598 204 417 599
Base content per 1 kb (bases) 441 559 329 112 229 329
Base content (%) 44.1% 55.9%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 246 282 203 43 51 231
Base content per 1 kb (bases) 466 534 384 81 97 438
Base content (%) 46.6% 53.4%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 14 (6.17%)
Serine (Ser, S)
n = 14 (6.17%)
Threonine (Thr, T)
n = 26 (11.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.52%)
Leucine (Leu, L)
n = 59 (25.99%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 13 (5.73%)
Proline (Pro, P)
n = 17 (7.49%)
Phenylalanine (Phe, F)
n = 8 (3.52%)
Tyrosine (Tyr, Y)
n = 4 (1.76%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 2 (0.88%)
Glutamic acid (Glu, E)
n = 4 (1.76%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 10 11 6 17 24 2 10 8 0 0 6 2 0 0 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 4 3 6 1 0 4 3 1 2 10 5 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 10 0 2 5 2 0 0 5 1 3 0 0 0 8 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 4 0 1 1 4 0 1 1 3 0 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
36 83 73 36
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 66 35 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 97 97 28
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPNPWFLTMLTTWAIFLLIIQPKLLPFTPTNSPMNKTNTSNKSTPWTWPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 10 (18.18%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 7 (12.73%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 3 (5.45%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 6 (10.91%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 2 2 1 1 4 0 1 2 0 0 0 0 0 0 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 1 0 0 0 0 0 2 3 4 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 0 0 1 2 0 0 0 0 0 0 0 0 1 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 3 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
1 17 25 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
5 23 12 16
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
1 26 23 6
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 42 (8.14%)
Serine (Ser, S)
n = 27 (5.23%)
Threonine (Thr, T)
n = 45 (8.72%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 33 (6.4%)
Leucine (Leu, L)
n = 65 (12.6%)
Isoleucine (Ile, I)
n = 41 (7.95%)
Methionine (Met, M)
n = 23 (4.46%)
Proline (Pro, P)
n = 30 (5.81%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 9 (1.74%)
Histidine (His, H)
n = 18 (3.49%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 27 21 10 11 35 2 7 9 0 3 10 19 1 14 28
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 8 19 14 1 4 18 21 4 1 13 16 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 16 1 3 11 10 0 1 2 6 13 0 0 1 14 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 9 1 2 13 9 0 0 2 6 0 0 1 0 0 17
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
147 123 137 110
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 141 95 204
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 218 209 77
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 15 (6.61%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 31 (13.66%)
Isoleucine (Ile, I)
n = 20 (8.81%)
Methionine (Met, M)
n = 9 (3.96%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 8 (3.52%)
Tyrosine (Tyr, Y)
n = 8 (3.52%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 12 (5.29%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 9 (3.96%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 16 6 5 6 12 4 4 8 0 2 3 9 0 2 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 1 8 6 0 0 2 4 2 1 3 9 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 8 0 0 11 6 0 0 2 5 3 0 0 0 5 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 14 1 5 7 4 0 1 1 3 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 62 56 46
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 61 62 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 88 99 31
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 21 (8.08%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 19 (7.31%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 12 (4.62%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 19 (7.31%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 15 (5.77%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 8 (3.08%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 15 9 2 10 11 2 6 8 1 1 3 8 0 4 19
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 5 12 4 0 2 5 11 2 1 8 6 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 10 0 0 6 7 0 0 6 1 7 0 1 0 4 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 8 0 1 3 4 0 0 1 4 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 70 62 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 68 53 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 120 108 26
CYTB (size: 1143 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 23 (6.05%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 31 (8.16%)
Cysteine (Cys, C)
n = 4 (1.05%)
Valine (Val, V)
n = 13 (3.42%)
Leucine (Leu, L)
n = 68 (17.89%)
Isoleucine (Ile, I)
n = 31 (8.16%)
Methionine (Met, M)
n = 12 (3.16%)
Proline (Pro, P)
n = 26 (6.84%)
Phenylalanine (Phe, F)
n = 24 (6.32%)
Tyrosine (Tyr, Y)
n = 16 (4.21%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 6 (1.58%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 12 (3.16%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 26 9 5 11 45 4 3 8 0 2 5 4 2 6 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 2 2 2 14 6 1 0 9 12 4 4 10 12 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 11 1 2 8 12 0 0 2 5 11 0 0 4 17 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 0 1 5 10 0 0 4 4 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 119 107 81
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 102 81 148
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 169 155 42
ND1 (size: 975 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.01%)
Alanine (Ala, A)
n = 31 (9.57%)
Serine (Ser, S)
n = 24 (7.41%)
Threonine (Thr, T)
n = 25 (7.72%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 12 (3.7%)
Leucine (Leu, L)
n = 65 (20.06%)
Isoleucine (Ile, I)
n = 19 (5.86%)
Methionine (Met, M)
n = 16 (4.94%)
Proline (Pro, P)
n = 26 (8.02%)
Phenylalanine (Phe, F)
n = 19 (5.86%)
Tyrosine (Tyr, Y)
n = 13 (4.01%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 5 (1.54%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 11 (3.4%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 12 12 9 19 26 2 8 5 1 2 3 7 0 4 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 2 7 15 9 0 2 8 3 0 2 10 13 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 7 0 1 8 9 1 1 4 5 8 0 1 2 9 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 2 2 3 7 0 1 2 5 0 0 0 1 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 99 83 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 101 57 131
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 138 129 46
ND2 (size: 1040 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 34 (9.86%)
Threonine (Thr, T)
n = 42 (12.17%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.74%)
Leucine (Leu, L)
n = 66 (19.13%)
Isoleucine (Ile, I)
n = 29 (8.41%)
Methionine (Met, M)
n = 22 (6.38%)
Proline (Pro, P)
n = 23 (6.67%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 7 (2.03%)
Tryptophan (Trp, W)
n = 9 (2.61%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 17 19 6 17 25 5 11 9 2 1 2 3 0 5 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 1 3 15 11 0 0 5 6 1 3 11 9 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 16 3 0 16 12 1 2 3 1 6 0 2 1 12 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 3 2 0 1 12 1 0 1 2 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
53 95 124 74
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 123 55 138
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 135 147 44
ND3 (size: 1040 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 34 (9.86%)
Threonine (Thr, T)
n = 42 (12.17%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.74%)
Leucine (Leu, L)
n = 66 (19.13%)
Isoleucine (Ile, I)
n = 29 (8.41%)
Methionine (Met, M)
n = 22 (6.38%)
Proline (Pro, P)
n = 23 (6.67%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 7 (2.03%)
Tryptophan (Trp, W)
n = 9 (2.61%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 17 19 6 17 25 5 11 9 2 1 2 3 0 5 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 1 3 15 11 0 0 5 6 1 3 11 9 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 16 3 0 16 12 1 2 3 1 6 0 2 1 12 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 3 2 0 1 12 1 0 1 2 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
53 95 124 74
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 123 55 138
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 135 147 44
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 34 (7.42%)
Serine (Ser, S)
n = 36 (7.86%)
Threonine (Thr, T)
n = 51 (11.14%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 7 (1.53%)
Leucine (Leu, L)
n = 108 (23.58%)
Isoleucine (Ile, I)
n = 36 (7.86%)
Methionine (Met, M)
n = 25 (5.46%)
Proline (Pro, P)
n = 29 (6.33%)
Phenylalanine (Phe, F)
n = 11 (2.4%)
Tyrosine (Tyr, Y)
n = 12 (2.62%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 7 (1.53%)
Asparagine (Asn, N)
n = 15 (3.28%)
Glutamine (Gln, Q)
n = 13 (2.84%)
Histidine (His, H)
n = 18 (3.93%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 23 23 10 35 46 7 10 13 0 0 2 5 0 1 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 1 3 11 19 1 1 6 10 1 4 10 15 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
28 16 0 1 14 11 1 2 7 3 9 2 0 5 10 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
15 7 0 0 3 10 0 1 0 10 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 169 146 75
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 141 78 187
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 184 205 56
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 5 (5.1%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 3 (3.06%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 2 (2.04%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 1 6 2 6 12 1 2 2 0 0 0 2 0 0 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 2 3 2 5 2 0 2 2 0 0 0 1 1 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 3 0 2 3 4 0 1 3 0 2 0 0 1 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 2 1 0 1 0 0 0 2 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
19 32 27 21
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
15 30 17 37
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 43 37 16
ND5 (size: 1818 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.45%)
Alanine (Ala, A)
n = 47 (7.77%)
Serine (Ser, S)
n = 46 (7.6%)
Threonine (Thr, T)
n = 84 (13.88%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 14 (2.31%)
Leucine (Leu, L)
n = 102 (16.86%)
Isoleucine (Ile, I)
n = 50 (8.26%)
Methionine (Met, M)
n = 30 (4.96%)
Proline (Pro, P)
n = 27 (4.46%)
Phenylalanine (Phe, F)
n = 32 (5.29%)
Tyrosine (Tyr, Y)
n = 13 (2.15%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 7 (1.16%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 26 (4.3%)
Glutamine (Gln, Q)
n = 17 (2.81%)
Histidine (His, H)
n = 16 (2.64%)
Lysine (Lys, K)
n = 24 (3.97%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
15 35 25 9 17 60 3 13 15 2 1 4 7 2 9 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 3 3 8 22 16 1 3 11 18 1 3 15 9 0 13
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
37 31 3 7 13 13 1 0 12 2 11 2 0 1 25 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 11 0 2 5 24 0 0 3 5 0 1 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
112 157 227 110
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
72 192 114 228
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 249 258 79
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 29 (16.57%)
Alanine (Ala, A)
n = 11 (6.29%)
Serine (Ser, S)
n = 13 (7.43%)
Threonine (Thr, T)
n = 3 (1.71%)
Cysteine (Cys, C)
n = 5 (2.86%)
Valine (Val, V)
n = 36 (20.57%)
Leucine (Leu, L)
n = 25 (14.29%)
Isoleucine (Ile, I)
n = 4 (2.29%)
Methionine (Met, M)
n = 7 (4.0%)
Proline (Pro, P)
n = 4 (2.29%)
Phenylalanine (Phe, F)
n = 16 (9.14%)
Tyrosine (Tyr, Y)
n = 6 (3.43%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 2 (1.14%)
Asparagine (Asn, N)
n = 2 (1.14%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 5 (2.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 0 1 2 0 0 1 6 0 0 20 1 3 12 16 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 5 0 1 1 3 6 7 0 2 20 1 1 0 2 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 0 6 1 0 1 5 0 5 1 4 16 2 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 2 3 0 0 0 1 0 1 3 0 0 0 1 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 12 21 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
48 26 14 88
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
74 5 16 81
Total protein-coding genes (size: 11401 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 222 (5.85%)
Alanine (Ala, A)
n = 284 (7.48%)
Serine (Ser, S)
n = 280 (7.37%)
Threonine (Thr, T)
n = 373 (9.82%)
Cysteine (Cys, C)
n = 32 (0.84%)
Valine (Val, V)
n = 158 (4.16%)
Leucine (Leu, L)
n = 681 (17.93%)
Isoleucine (Ile, I)
n = 283 (7.45%)
Methionine (Met, M)
n = 179 (4.71%)
Proline (Pro, P)
n = 228 (6.0%)
Phenylalanine (Phe, F)
n = 211 (5.56%)
Tyrosine (Tyr, Y)
n = 110 (2.9%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 62 (1.63%)
Glutamic acid (Glu, E)
n = 89 (2.34%)
Asparagine (Asn, N)
n = 131 (3.45%)
Glutamine (Gln, Q)
n = 97 (2.55%)
Histidine (His, H)
n = 106 (2.79%)
Lysine (Lys, K)
n = 89 (2.34%)
Arginine (Arg, R)
n = 70 (1.84%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
90 193 146 67 159 317 35 82 91 6 32 39 70 17 62 149
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
33 14 18 45 128 100 11 21 70 94 37 24 99 101 4 53
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
180 132 8 25 103 88 5 12 47 34 76 8 21 18 113 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
86 79 10 17 45 88 1 5 17 45 3 1 1 7 1 96
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
815 1079 1116 789
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
489 1106 692 1512
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
201 1522 1537 539 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​F​a​l​c​o​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ c​h​e​r​r​u​g​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.