Viewing data for Dugong dugon


Scientific name Dugong dugon
Common name Dugong
Maximum lifespan 73.00 years (Dugong dugon@AnAge)

Total mtDNA (size: 16850 bases) GC AT G C A T
Base content (bases) 7305 9545 4816 2489 4447 5098
Base content per 1 kb (bases) 434 566 286 148 264 303
Base content (%) 43.4% 56.6%
Total protein-coding genes (size: 11342 bases) GC AT G C A T
Base content (bases) 5004 6338 3468 1536 3062 3276
Base content per 1 kb (bases) 441 559 306 135 270 289
Base content (%) 44.1% 55.9%
D-loop (size: 1420 bases) GC AT G C A T
Base content (bases) 624 796 403 221 374 422
Base content per 1 kb (bases) 439 561 284 156 263 297
Base content (%) 43.9% 56.1%
Total tRNA-coding genes (size: 1509 bases) GC AT G C A T
Base content (bases) 587 922 342 245 414 508
Base content per 1 kb (bases) 389 611 227 162 274 337
Base content (%) 38.9% 61.1%
Total rRNA-coding genes (size: 2522 bases) GC AT G C A T
Base content (bases) 1059 1463 588 471 586 877
Base content per 1 kb (bases) 420 580 233 187 232 348
Base content (%) 42.0% 58.0%
12S rRNA gene (size: 957 bases) GC AT G C A T
Base content (bases) 420 537 235 185 213 324
Base content per 1 kb (bases) 439 561 246 193 223 339
Base content (%) 43.9% 56.1%
16S rRNA gene (size: 1565 bases) GC AT G C A T
Base content (bases) 639 926 353 286 373 553
Base content per 1 kb (bases) 408 592 226 183 238 353
Base content (%) 40.8% 59.2%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 293 388 204 89 200 188
Base content per 1 kb (bases) 430 570 300 131 294 276
Base content (%) 43.0% 57.0%
ATP8 (size: 204 bases) GC AT G C A T
Base content (bases) 71 133 59 12 63 70
Base content per 1 kb (bases) 348 652 289 59 309 343
Base content (%) 34.8% 65.2%
COX1 (size: 1542 bases) GC AT G C A T
Base content (bases) 706 836 420 286 435 401
Base content per 1 kb (bases) 458 542 272 185 282 260
Base content (%) 45.8% 54.2%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 294 390 189 105 175 215
Base content per 1 kb (bases) 430 570 276 154 256 314
Base content (%) 43.0% 57.0%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 370 414 240 130 216 198
Base content per 1 kb (bases) 472 528 306 166 276 253
Base content (%) 47.2% 52.8%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 537 603 381 156 287 316
Base content per 1 kb (bases) 471 529 334 137 252 277
Base content (%) 47.1% 52.9%
ND1 (size: 957 bases) GC AT G C A T
Base content (bases) 417 540 296 121 262 278
Base content per 1 kb (bases) 436 564 309 126 274 290
Base content (%) 43.6% 56.4%
ND2 (size: 1044 bases) GC AT G C A T
Base content (bases) 426 618 320 106 282 336
Base content per 1 kb (bases) 408 592 307 102 270 322
Base content (%) 40.8% 59.2%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 150 196 105 45 100 96
Base content per 1 kb (bases) 434 566 303 130 289 277
Base content (%) 43.4% 56.6%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 599 779 427 172 384 395
Base content per 1 kb (bases) 435 565 310 125 279 287
Base content (%) 43.5% 56.5%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 132 165 87 45 96 69
Base content per 1 kb (bases) 444 556 293 152 323 232
Base content (%) 44.4% 55.6%
ND5 (size: 1812 bases) GC AT G C A T
Base content (bases) 788 1024 563 225 490 534
Base content per 1 kb (bases) 435 565 311 124 270 295
Base content (%) 43.5% 56.5%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 237 291 190 47 89 202
Base content per 1 kb (bases) 449 551 360 89 169 383
Base content (%) 44.9% 55.1%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%)
Alanine (Ala, A)
n = 20 (8.85%)
Serine (Ser, S)
n = 12 (5.31%)
Threonine (Thr, T)
n = 21 (9.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 12 (5.31%)
Leucine (Leu, L)
n = 43 (19.03%)
Isoleucine (Ile, I)
n = 28 (12.39%)
Methionine (Met, M)
n = 11 (4.87%)
Proline (Pro, P)
n = 13 (5.75%)
Phenylalanine (Phe, F)
n = 11 (4.87%)
Tyrosine (Tyr, Y)
n = 4 (1.77%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 6 (2.65%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 18 7 5 8 18 3 7 7 1 4 3 3 2 7 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 9 6 5 0 2 6 2 1 3 5 4 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 7 3 4 1 4 0 0 3 3 1 0 2 2 8 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 1 0 1 3 1 1 2 1 1 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
47 66 77 37
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 63 37 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 75 74 58
ATP8 (size: 204 bases)
Amino acid sequence: MPQLDTTTWFITILSMLITLFILFQTKLLNYTYPLNALPISPNVTNHLTPWKMKWTKTYLPLSLPLQ*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.49%)
Serine (Ser, S)
n = 3 (4.48%)
Threonine (Thr, T)
n = 11 (16.42%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.49%)
Leucine (Leu, L)
n = 14 (20.9%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 3 (4.48%)
Tyrosine (Tyr, Y)
n = 3 (4.48%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 4 (5.97%)
Glutamine (Gln, Q)
n = 3 (4.48%)
Histidine (His, H)
n = 1 (1.49%)
Lysine (Lys, K)
n = 4 (5.97%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 3 1 2 1 4 0 6 2 1 0 0 1 0 2 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 0 0 1 0 0 0 0 0 4 3 0 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 3 1 1 1 1 0 0 0 2 1 0 1 1 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 0 0 0 1 3 1 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 18 27 20
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 22 17 26
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 19 26 17
COX1 (size: 1542 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 48 (9.36%)
Alanine (Ala, A)
n = 39 (7.6%)
Serine (Ser, S)
n = 31 (6.04%)
Threonine (Thr, T)
n = 38 (7.41%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.8%)
Leucine (Leu, L)
n = 61 (11.89%)
Isoleucine (Ile, I)
n = 37 (7.21%)
Methionine (Met, M)
n = 30 (5.85%)
Proline (Pro, P)
n = 27 (5.26%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 14 (2.73%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 18 (3.51%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 17 (3.31%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 27 23 6 10 26 10 7 7 0 6 16 12 6 15 27
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 0 1 15 16 7 1 9 11 14 14 9 6 10 2 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 16 6 6 5 17 0 1 2 8 11 4 2 5 13 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 3 5 9 7 2 1 2 5 0 0 0 0 1 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
151 111 135 117
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 132 95 210
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
58 177 171 108
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 8 (3.52%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 10 (4.41%)
Leucine (Leu, L)
n = 34 (14.98%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 16 (7.05%)
Proline (Pro, P)
n = 15 (6.61%)
Phenylalanine (Phe, F)
n = 6 (2.64%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 13 (5.73%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 14 10 2 5 14 5 8 5 2 3 2 4 1 3 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 2 3 2 3 0 1 4 0 3 1 2 9 3 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 5 0 3 5 8 1 1 3 2 8 0 0 3 2 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 8 6 4 9 4 0 0 1 5 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
53 61 65 49
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 57 61 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 71 89 41
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 18 (6.92%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 7 7 8 5 13 3 2 6 2 3 4 7 3 6 17
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 2 9 5 0 2 10 6 3 1 6 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 8 1 2 8 5 2 0 3 3 8 2 1 2 3 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 7 1 3 1 3 0 3 0 2 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 71 56 68
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 65 57 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 104 85 51
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.6%)
Alanine (Ala, A)
n = 20 (5.28%)
Serine (Ser, S)
n = 26 (6.86%)
Threonine (Thr, T)
n = 24 (6.33%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 19 (5.01%)
Leucine (Leu, L)
n = 66 (17.41%)
Isoleucine (Ile, I)
n = 40 (10.55%)
Methionine (Met, M)
n = 9 (2.37%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 23 (6.07%)
Tyrosine (Tyr, Y)
n = 17 (4.49%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 9 (2.37%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 26 7 2 23 27 10 4 6 0 3 5 10 1 4 19
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 4 4 10 5 1 1 12 8 4 4 7 11 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 9 1 1 9 14 0 0 2 5 12 0 0 3 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 6 0 1 10 9 0 0 1 7 1 0 1 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 113 102 84
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 91 79 157
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 177 135 46
ND1 (size: 957 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.46%)
Alanine (Ala, A)
n = 29 (9.12%)
Serine (Ser, S)
n = 20 (6.29%)
Threonine (Thr, T)
n = 25 (7.86%)
Cysteine (Cys, C)
n = 3 (0.94%)
Valine (Val, V)
n = 13 (4.09%)
Leucine (Leu, L)
n = 58 (18.24%)
Isoleucine (Ile, I)
n = 23 (7.23%)
Methionine (Met, M)
n = 19 (5.97%)
Proline (Pro, P)
n = 23 (7.23%)
Phenylalanine (Phe, F)
n = 21 (6.6%)
Tyrosine (Tyr, Y)
n = 10 (3.14%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 13 (4.09%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 5 (1.57%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 13 16 5 7 32 6 6 6 0 2 6 4 1 9 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 2 1 4 17 8 0 1 4 4 2 3 10 10 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 4 2 3 5 10 0 0 2 5 5 2 2 4 9 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 0 3 7 1 1 0 6 1 0 0 1 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
67 92 90 70
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 95 57 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 109 131 58
ND2 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.32%)
Alanine (Ala, A)
n = 20 (5.76%)
Serine (Ser, S)
n = 32 (9.22%)
Threonine (Thr, T)
n = 35 (10.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 33 (9.51%)
Methionine (Met, M)
n = 36 (10.37%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 18 (5.19%)
Glutamine (Gln, Q)
n = 7 (2.02%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 10 (2.88%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 21 31 3 21 30 4 8 7 0 2 2 2 0 6 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 0 3 10 7 0 3 4 6 2 6 9 4 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 8 1 5 5 13 3 3 3 1 7 1 2 7 11 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 5 0 2 1 9 1 0 2 1 1 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
49 95 138 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
35 101 58 154
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 124 140 62
ND3 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.32%)
Alanine (Ala, A)
n = 20 (5.76%)
Serine (Ser, S)
n = 32 (9.22%)
Threonine (Thr, T)
n = 35 (10.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 33 (9.51%)
Methionine (Met, M)
n = 36 (10.37%)
Proline (Pro, P)
n = 20 (5.76%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 18 (5.19%)
Glutamine (Gln, Q)
n = 7 (2.02%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 10 (2.88%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 21 31 3 21 30 4 8 7 0 2 2 2 0 6 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 0 3 10 7 0 3 4 6 2 6 9 4 1 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 8 1 5 5 13 3 3 3 1 7 1 2 7 11 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 5 0 2 1 9 1 0 2 1 1 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
49 95 138 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
35 101 58 154
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 124 140 62
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 32 (6.99%)
Serine (Ser, S)
n = 39 (8.52%)
Threonine (Thr, T)
n = 39 (8.52%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 95 (20.74%)
Isoleucine (Ile, I)
n = 43 (9.39%)
Methionine (Met, M)
n = 34 (7.42%)
Proline (Pro, P)
n = 22 (4.8%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 14 (3.06%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 18 (3.93%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 13 (2.84%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 23 25 13 21 42 8 9 9 2 2 3 4 2 7 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 1 3 9 17 5 1 0 8 5 5 3 10 8 1 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 6 5 7 11 10 1 1 9 7 7 0 2 7 11 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 5 3 0 5 10 2 1 0 7 2 0 0 0 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 140 156 89
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 122 81 201
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
43 165 158 93
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 3 (3.06%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 8 (8.16%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 6 4 4 6 9 2 2 2 0 0 1 2 2 3 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 4 2 2 3 0 0 2 0 3 0 1 1 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 1 0 1 5 1 0 0 0 3 1 0 1 2 3 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 0 2 0 1 0 0 0 1 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
20 29 25 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
10 19 18 52
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 39 26 19
ND5 (size: 1812 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.14%)
Alanine (Ala, A)
n = 42 (6.97%)
Serine (Ser, S)
n = 52 (8.62%)
Threonine (Thr, T)
n = 52 (8.62%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 20 (3.32%)
Leucine (Leu, L)
n = 92 (15.26%)
Isoleucine (Ile, I)
n = 58 (9.62%)
Methionine (Met, M)
n = 36 (5.97%)
Proline (Pro, P)
n = 31 (5.14%)
Phenylalanine (Phe, F)
n = 41 (6.8%)
Tyrosine (Tyr, Y)
n = 20 (3.32%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 10 (1.66%)
Glutamic acid (Glu, E)
n = 12 (1.99%)
Asparagine (Asn, N)
n = 24 (3.98%)
Glutamine (Gln, Q)
n = 14 (2.32%)
Histidine (His, H)
n = 20 (3.32%)
Lysine (Lys, K)
n = 21 (3.48%)
Arginine (Arg, R)
n = 11 (1.82%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 37 32 14 22 32 10 11 10 4 1 7 11 1 7 34
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 3 12 23 7 0 1 10 13 7 8 12 9 2 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 20 2 10 11 19 0 1 11 7 13 1 3 9 15 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
15 11 1 3 7 16 5 3 2 6 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
115 154 203 132
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
70 165 122 247
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
40 244 209 111
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 33 (18.86%)
Alanine (Ala, A)
n = 7 (4.0%)
Serine (Ser, S)
n = 15 (8.57%)
Threonine (Thr, T)
n = 5 (2.86%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 28 (16.0%)
Leucine (Leu, L)
n = 20 (11.43%)
Isoleucine (Ile, I)
n = 6 (3.43%)
Methionine (Met, M)
n = 12 (6.86%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 12 (6.86%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 10 (5.71%)
Asparagine (Asn, N)
n = 2 (1.14%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 3 (1.71%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 1 3 2 0 2 1 5 0 0 14 3 6 5 10 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 1 1 5 1 0 1 9 1 5 18 2 0 1 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 1 2 1 3 2 7 0 6 3 3 10 2 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 9 3 0 0 1 2 0 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 11 33 51
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 23 26 78
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
60 13 30 73
Total protein-coding genes (size: 11397 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 229 (6.03%)
Alanine (Ala, A)
n = 255 (6.72%)
Serine (Ser, S)
n = 283 (7.45%)
Threonine (Thr, T)
n = 298 (7.85%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 186 (4.9%)
Leucine (Leu, L)
n = 634 (16.7%)
Isoleucine (Ile, I)
n = 322 (8.48%)
Methionine (Met, M)
n = 229 (6.03%)
Proline (Pro, P)
n = 203 (5.35%)
Phenylalanine (Phe, F)
n = 226 (5.95%)
Tyrosine (Tyr, Y)
n = 133 (3.5%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 95 (2.5%)
Asparagine (Asn, N)
n = 143 (3.77%)
Glutamine (Gln, Q)
n = 82 (2.16%)
Histidine (His, H)
n = 109 (2.87%)
Lysine (Lys, K)
n = 88 (2.32%)
Arginine (Arg, R)
n = 71 (1.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
123 199 170 72 135 260 64 77 70 12 40 52 69 25 82 144
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
59 6 21 70 120 61 4 30 73 64 62 44 74 73 12 62
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
123 90 23 46 67 107 10 14 39 54 79 14 26 47 96 37
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
72 68 27 21 50 74 14 12 12 41 6 0 1 7 2 90
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
836 996 1134 832
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
485 986 730 1597
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
361 1356 1321 760

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​D​u​g​o​n​g​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ d​u​g​o​n​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​



Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.