Viewing data for Pelusios castaneus
| Scientific name | Pelusios castaneus |
| Common name | West African mud turtle |
| Maximum lifespan | 41.00 years (Pelusios castaneus@AnAge) |
| Total mtDNA (size: 16761 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6778 | 9983 | 4730 | 2048 | 4557 | 5426 |
| Base content per 1 kb (bases) | 404 | 596 | 282 | 122 | 272 | 324 |
| Base content (%) | 40.4% | 59.6% | ||||
| Total protein-coding genes (size: 11277 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4661 | 6616 | 3433 | 1228 | 3076 | 3540 |
| Base content per 1 kb (bases) | 413 | 587 | 304 | 109 | 273 | 314 |
| Base content (%) | 41.3% | 58.7% | ||||
| D-loop (size: 1180 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 393 | 787 | 270 | 123 | 419 | 368 |
| Base content per 1 kb (bases) | 333 | 667 | 229 | 104 | 355 | 312 |
| Base content (%) | 33.3% | 66.7% | ||||
| Total tRNA-coding genes (size: 1524 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 590 | 934 | 354 | 236 | 415 | 519 |
| Base content per 1 kb (bases) | 387 | 613 | 232 | 155 | 272 | 341 |
| Base content (%) | 38.7% | 61.3% | ||||
| Total rRNA-coding genes (size: 2568 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1049 | 1519 | 600 | 449 | 594 | 925 |
| Base content per 1 kb (bases) | 408 | 592 | 234 | 175 | 231 | 360 |
| Base content (%) | 40.8% | 59.2% | ||||
| 12S rRNA gene (size: 971 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 422 | 549 | 240 | 182 | 211 | 338 |
| Base content per 1 kb (bases) | 435 | 565 | 247 | 187 | 217 | 348 |
| Base content (%) | 43.5% | 56.5% | ||||
| 16S rRNA gene (size: 1597 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 627 | 970 | 360 | 267 | 383 | 587 |
| Base content per 1 kb (bases) | 393 | 607 | 225 | 167 | 240 | 368 |
| Base content (%) | 39.3% | 60.7% | ||||
| ATP6 (size: 690 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 280 | 410 | 225 | 55 | 189 | 221 |
| Base content per 1 kb (bases) | 406 | 594 | 326 | 80 | 274 | 320 |
| Base content (%) | 40.6% | 59.4% | ||||
| ATP8 (size: 165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 60 | 105 | 54 | 6 | 43 | 62 |
| Base content per 1 kb (bases) | 364 | 636 | 327 | 36 | 261 | 376 |
| Base content (%) | 36.4% | 63.6% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 645 | 900 | 427 | 218 | 456 | 444 |
| Base content per 1 kb (bases) | 417 | 583 | 276 | 141 | 295 | 287 |
| Base content (%) | 41.7% | 58.3% | ||||
| COX2 (size: 688 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 279 | 409 | 202 | 77 | 177 | 232 |
| Base content per 1 kb (bases) | 406 | 594 | 294 | 112 | 257 | 337 |
| Base content (%) | 40.6% | 59.4% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 332 | 453 | 233 | 99 | 221 | 232 |
| Base content per 1 kb (bases) | 423 | 577 | 297 | 126 | 282 | 296 |
| Base content (%) | 42.3% | 57.7% | ||||
| CYTB (size: 1101 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 502 | 599 | 375 | 127 | 298 | 301 |
| Base content per 1 kb (bases) | 456 | 544 | 341 | 115 | 271 | 273 |
| Base content (%) | 45.6% | 54.4% | ||||
| ND1 (size: 972 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 399 | 573 | 285 | 114 | 298 | 275 |
| Base content per 1 kb (bases) | 410 | 590 | 293 | 117 | 307 | 283 |
| Base content (%) | 41.0% | 59.0% | ||||
| ND2 (size: 1044 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 419 | 625 | 321 | 98 | 270 | 355 |
| Base content per 1 kb (bases) | 401 | 599 | 307 | 94 | 259 | 340 |
| Base content (%) | 40.1% | 59.9% | ||||
| ND3 (size: 305 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 132 | 173 | 101 | 31 | 80 | 93 |
| Base content per 1 kb (bases) | 433 | 567 | 331 | 102 | 262 | 305 |
| Base content (%) | 43.3% | 56.7% | ||||
| ND4 (size: 1386 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 549 | 837 | 414 | 135 | 389 | 448 |
| Base content per 1 kb (bases) | 396 | 604 | 299 | 97 | 281 | 323 |
| Base content (%) | 39.6% | 60.4% | ||||
| ND4L (size: 299 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 121 | 178 | 85 | 36 | 88 | 90 |
| Base content per 1 kb (bases) | 405 | 595 | 284 | 120 | 294 | 301 |
| Base content (%) | 40.5% | 59.5% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 722 | 1096 | 534 | 188 | 500 | 596 |
| Base content per 1 kb (bases) | 397 | 603 | 294 | 103 | 275 | 328 |
| Base content (%) | 39.7% | 60.3% | ||||
| ND6 (size: 504 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 225 | 279 | 179 | 46 | 75 | 204 |
| Base content per 1 kb (bases) | 446 | 554 | 355 | 91 | 149 | 405 |
| Base content (%) | 44.6% | 55.4% | ||||
| ATP6 (size: 690 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.49%) 
Alanine (Ala, A)
n = 13 (5.68%) 
Serine (Ser, S)
n = 15 (6.55%) 
Threonine (Thr, T)
n = 33 (14.41%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 6 (2.62%) 
Leucine (Leu, L)
n = 59 (25.76%) 
Isoleucine (Ile, I)
n = 18 (7.86%) 
Methionine (Met, M)
n = 10 (4.37%) 
Proline (Pro, P)
n = 16 (6.99%) 
Phenylalanine (Phe, F)
n = 9 (3.93%) 
Tyrosine (Tyr, Y)
n = 3 (1.31%) 
Tryptophan (Trp, W)
n = 3 (1.31%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.75%) 
Asparagine (Asn, N)
n = 9 (3.93%) 
Glutamine (Gln, Q)
n = 9 (3.93%) 
Histidine (His, H)
n = 4 (1.75%) 
Lysine (Lys, K)
n = 3 (1.31%) 
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 11 | 8 | 7 | 12 | 22 | 0 | 17 | 9 | 0 | 0 | 0 | 6 | 0 | 4 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 2 | 8 | 3 | 0 | 1 | 3 | 4 | 0 | 7 | 2 | 7 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 15 | 0 | 1 | 6 | 5 | 0 | 0 | 3 | 1 | 2 | 0 | 1 | 3 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 4 | 0 | 0 | 1 | 3 | 0 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 32 | 76 | 76 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 20 | 74 | 34 | 102 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 75 | 111 | 41 | ||||||||||||
| ATP8 (size: 165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPYPWFSTFLTSWLILIILLLKIKSHVSNNPPTNKKNTLTTPSPWIWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 5 (9.26%)
Threonine (Thr, T)
n = 7 (12.96%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.85%)
Leucine (Leu, L)
n = 8 (14.81%)
Isoleucine (Ile, I)
n = 5 (9.26%)
Methionine (Met, M)
n = 1 (1.85%)
Proline (Pro, P)
n = 8 (14.81%)
Phenylalanine (Phe, F)
n = 2 (3.7%)
Tyrosine (Tyr, Y)
n = 1 (1.85%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 5 (9.26%)
Glutamine (Gln, Q)
n = 1 (1.85%)
Histidine (His, H)
n = 1 (1.85%)
Lysine (Lys, K)
n = 4 (7.41%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 4 | 1 | 2 | 2 | 2 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 7 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 2 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1 | 16 | 22 | 16 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 20 | 13 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 0 | 18 | 27 | 10 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 43 (8.37%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 34 (6.61%)
Threonine (Thr, T)
n = 38 (7.39%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 30 (5.84%)
Leucine (Leu, L)
n = 64 (12.45%)
Isoleucine (Ile, I)
n = 45 (8.75%)
Methionine (Met, M)
n = 32 (6.23%)
Proline (Pro, P)
n = 26 (5.06%)
Phenylalanine (Phe, F)
n = 38 (7.39%)
Tyrosine (Tyr, Y)
n = 17 (3.31%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 6 (1.17%)
Asparagine (Asn, N)
n = 22 (4.28%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 8 (1.56%)
Arginine (Arg, R)
n = 9 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 24 | 30 | 17 | 12 | 24 | 0 | 11 | 7 | 0 | 7 | 8 | 15 | 0 | 10 | 28 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 8 | 18 | 16 | 0 | 13 | 7 | 20 | 3 | 6 | 8 | 12 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 16 | 0 | 3 | 13 | 14 | 0 | 2 | 2 | 9 | 8 | 2 | 0 | 5 | 17 | 10 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 0 | 9 | 6 | 8 | 0 | 3 | 2 | 4 | 0 | 1 | 0 | 0 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 136 | 115 | 150 | 114 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 136 | 95 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 176 | 199 | 133 | ||||||||||||
| COX2 (size: 688 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.07%)
Alanine (Ala, A)
n = 12 (5.26%)
Serine (Ser, S)
n = 16 (7.02%)
Threonine (Thr, T)
n = 21 (9.21%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 10 (4.39%)
Leucine (Leu, L)
n = 31 (13.6%)
Isoleucine (Ile, I)
n = 20 (8.77%)
Methionine (Met, M)
n = 14 (6.14%)
Proline (Pro, P)
n = 13 (5.7%)
Phenylalanine (Phe, F)
n = 7 (3.07%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 10 (4.39%)
Glutamic acid (Glu, E)
n = 13 (5.7%)
Asparagine (Asn, N)
n = 10 (4.39%)
Glutamine (Gln, Q)
n = 11 (4.82%)
Histidine (His, H)
n = 10 (4.39%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 5 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 13 | 11 | 9 | 4 | 11 | 0 | 6 | 11 | 0 | 1 | 4 | 5 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 5 | 3 | 4 | 0 | 3 | 2 | 2 | 0 | 2 | 9 | 2 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 12 | 0 | 1 | 5 | 8 | 0 | 1 | 1 | 3 | 6 | 0 | 1 | 3 | 7 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 13 | 0 | 2 | 8 | 3 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 52 | 63 | 70 | 44 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 21 | 60 | 66 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 79 | 96 | 50 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (6.92%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 17 (6.54%)
Threonine (Thr, T)
n = 27 (10.38%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 11 (4.23%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 9 (3.46%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 10 | 12 | 7 | 8 | 12 | 1 | 6 | 8 | 0 | 1 | 5 | 5 | 0 | 6 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 1 | 7 | 1 | 6 | 0 | 5 | 6 | 7 | 0 | 1 | 6 | 5 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 12 | 1 | 2 | 5 | 5 | 0 | 0 | 5 | 3 | 7 | 0 | 1 | 3 | 6 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 0 | 2 | 1 | 1 | 1 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 69 | 73 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 65 | 56 | 99 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 99 | 102 | 56 | ||||||||||||
| CYTB (size: 1101 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (6.28%)
Alanine (Ala, A)
n = 23 (6.28%)
Serine (Ser, S)
n = 25 (6.83%)
Threonine (Thr, T)
n = 32 (8.74%)
Cysteine (Cys, C)
n = 2 (0.55%)
Valine (Val, V)
n = 12 (3.28%)
Leucine (Leu, L)
n = 64 (17.49%)
Isoleucine (Ile, I)
n = 35 (9.56%)
Methionine (Met, M)
n = 9 (2.46%)
Proline (Pro, P)
n = 23 (6.28%)
Phenylalanine (Phe, F)
n = 24 (6.56%)
Tyrosine (Tyr, Y)
n = 15 (4.1%)
Tryptophan (Trp, W)
n = 11 (3.01%)
Aspartic acid (Asp, D)
n = 7 (1.91%)
Glutamic acid (Glu, E)
n = 5 (1.37%)
Asparagine (Asn, N)
n = 21 (5.74%)
Glutamine (Gln, Q)
n = 8 (2.19%)
Histidine (His, H)
n = 11 (3.01%)
Lysine (Lys, K)
n = 9 (2.46%)
Arginine (Arg, R)
n = 7 (1.91%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 24 | 9 | 8 | 21 | 20 | 3 | 12 | 8 | 0 | 2 | 3 | 6 | 1 | 11 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 2 | 5 | 15 | 3 | 0 | 3 | 7 | 10 | 3 | 6 | 11 | 6 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 9 | 1 | 6 | 10 | 5 | 2 | 0 | 2 | 1 | 14 | 1 | 0 | 6 | 15 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 4 | 1 | 0 | 7 | 9 | 0 | 0 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 101 | 108 | 88 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 45 | 101 | 77 | 144 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 173 | 116 | 66 | ||||||||||||
| ND1 (size: 972 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.95%)
Alanine (Ala, A)
n = 23 (7.12%)
Serine (Ser, S)
n = 30 (9.29%)
Threonine (Thr, T)
n = 28 (8.67%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 14 (4.33%)
Leucine (Leu, L)
n = 57 (17.65%)
Isoleucine (Ile, I)
n = 22 (6.81%)
Methionine (Met, M)
n = 16 (4.95%)
Proline (Pro, P)
n = 23 (7.12%)
Phenylalanine (Phe, F)
n = 23 (7.12%)
Tyrosine (Tyr, Y)
n = 13 (4.02%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 3 (0.93%)
Glutamic acid (Glu, E)
n = 10 (3.1%)
Asparagine (Asn, N)
n = 12 (3.72%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 6 (1.86%)
Arginine (Arg, R)
n = 8 (2.48%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 10 | 15 | 11 | 8 | 27 | 1 | 10 | 6 | 0 | 4 | 6 | 4 | 0 | 11 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 6 | 8 | 7 | 2 | 2 | 5 | 7 | 2 | 6 | 10 | 7 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 12 | 0 | 7 | 8 | 10 | 0 | 0 | 5 | 5 | 8 | 2 | 0 | 10 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 10 | 0 | 1 | 2 | 6 | 0 | 1 | 2 | 5 | 0 | 0 | 0 | 0 | 1 | 6 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 87 | 89 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 99 | 54 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 99 | 132 | 84 | ||||||||||||
| ND2 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 56 (16.14%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 61 (17.58%)
Isoleucine (Ile, I)
n = 30 (8.65%)
Methionine (Met, M)
n = 20 (5.76%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 12 (3.46%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 16 | 18 | 9 | 10 | 23 | 2 | 17 | 12 | 1 | 0 | 4 | 6 | 0 | 3 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 3 | 0 | 2 | 11 | 8 | 1 | 1 | 2 | 9 | 1 | 4 | 6 | 8 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 25 | 1 | 5 | 7 | 6 | 0 | 1 | 3 | 6 | 4 | 2 | 0 | 3 | 12 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 4 | 0 | 1 | 0 | 7 | 2 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 92 | 134 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 114 | 65 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 115 | 156 | 65 | ||||||||||||
| ND3 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.75%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 22 (6.34%)
Threonine (Thr, T)
n = 56 (16.14%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 61 (17.58%)
Isoleucine (Ile, I)
n = 30 (8.65%)
Methionine (Met, M)
n = 20 (5.76%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 12 (3.46%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 16 | 18 | 9 | 10 | 23 | 2 | 17 | 12 | 1 | 0 | 4 | 6 | 0 | 3 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 3 | 0 | 2 | 11 | 8 | 1 | 1 | 2 | 9 | 1 | 4 | 6 | 8 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 25 | 1 | 5 | 7 | 6 | 0 | 1 | 3 | 6 | 4 | 2 | 0 | 3 | 12 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 4 | 0 | 1 | 0 | 7 | 2 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 92 | 134 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 114 | 65 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 115 | 156 | 65 | ||||||||||||
| ND4 (size: 1386 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.56%)
Alanine (Ala, A)
n = 26 (5.64%)
Serine (Ser, S)
n = 34 (7.38%)
Threonine (Thr, T)
n = 54 (11.71%)
Cysteine (Cys, C)
n = 3 (0.65%)
Valine (Val, V)
n = 8 (1.74%)
Leucine (Leu, L)
n = 95 (20.61%)
Isoleucine (Ile, I)
n = 40 (8.68%)
Methionine (Met, M)
n = 31 (6.72%)
Proline (Pro, P)
n = 27 (5.86%)
Phenylalanine (Phe, F)
n = 20 (4.34%)
Tyrosine (Tyr, Y)
n = 10 (2.17%)
Tryptophan (Trp, W)
n = 13 (2.82%)
Aspartic acid (Asp, D)
n = 2 (0.43%)
Glutamic acid (Glu, E)
n = 9 (1.95%)
Asparagine (Asn, N)
n = 18 (3.9%)
Glutamine (Gln, Q)
n = 9 (1.95%)
Histidine (His, H)
n = 18 (3.9%)
Lysine (Lys, K)
n = 13 (2.82%)
Arginine (Arg, R)
n = 10 (2.17%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 22 | 28 | 11 | 19 | 35 | 2 | 28 | 7 | 2 | 0 | 1 | 7 | 0 | 7 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 1 | 6 | 11 | 9 | 0 | 6 | 5 | 8 | 2 | 7 | 9 | 11 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 23 | 1 | 6 | 9 | 12 | 2 | 1 | 4 | 4 | 6 | 1 | 0 | 5 | 13 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 7 | 2 | 0 | 2 | 13 | 0 | 1 | 1 | 7 | 1 | 0 | 0 | 0 | 1 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 66 | 131 | 161 | 104 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 136 | 80 | 194 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 147 | 207 | 91 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 8 (8.16%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 7 (7.14%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 2 (2.04%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 5 | 6 | 6 | 6 | 8 | 1 | 3 | 4 | 0 | 0 | 1 | 2 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 3 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 3 | 1 | 1 | 1 | 4 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 20 | 33 | 28 | 18 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 11 | 24 | 19 | 45 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 28 | 41 | 25 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 51 (8.43%)
Serine (Ser, S)
n = 46 (7.6%)
Threonine (Thr, T)
n = 59 (9.75%)
Cysteine (Cys, C)
n = 8 (1.32%)
Valine (Val, V)
n = 12 (1.98%)
Leucine (Leu, L)
n = 103 (17.02%)
Isoleucine (Ile, I)
n = 54 (8.93%)
Methionine (Met, M)
n = 43 (7.11%)
Proline (Pro, P)
n = 28 (4.63%)
Phenylalanine (Phe, F)
n = 34 (5.62%)
Tyrosine (Tyr, Y)
n = 21 (3.47%)
Tryptophan (Trp, W)
n = 9 (1.49%)
Aspartic acid (Asp, D)
n = 15 (2.48%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 17 (2.81%)
Glutamine (Gln, Q)
n = 14 (2.31%)
Histidine (His, H)
n = 10 (1.65%)
Lysine (Lys, K)
n = 33 (5.45%)
Arginine (Arg, R)
n = 10 (1.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 33 | 39 | 21 | 26 | 36 | 0 | 17 | 14 | 0 | 3 | 2 | 7 | 0 | 11 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 3 | 5 | 9 | 25 | 17 | 0 | 5 | 6 | 16 | 0 | 7 | 8 | 13 | 0 | 13 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 26 | 0 | 4 | 19 | 15 | 0 | 4 | 4 | 8 | 13 | 1 | 3 | 9 | 8 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 10 | 1 | 2 | 13 | 32 | 1 | 0 | 1 | 9 | 0 | 0 | 0 | 1 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 116 | 145 | 214 | 131 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 62 | 176 | 122 | 246 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 213 | 260 | 123 | ||||||||||||
| ND6 (size: 504 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (13.77%)
Alanine (Ala, A)
n = 13 (7.78%)
Serine (Ser, S)
n = 12 (7.19%)
Threonine (Thr, T)
n = 5 (2.99%)
Cysteine (Cys, C)
n = 3 (1.8%)
Valine (Val, V)
n = 29 (17.37%)
Leucine (Leu, L)
n = 27 (16.17%)
Isoleucine (Ile, I)
n = 6 (3.59%)
Methionine (Met, M)
n = 8 (4.79%)
Proline (Pro, P)
n = 2 (1.2%)
Phenylalanine (Phe, F)
n = 11 (6.59%)
Tyrosine (Tyr, Y)
n = 9 (5.39%)
Tryptophan (Trp, W)
n = 6 (3.59%)
Aspartic acid (Asp, D)
n = 2 (1.2%)
Glutamic acid (Glu, E)
n = 5 (2.99%)
Asparagine (Asn, N)
n = 1 (0.6%)
Glutamine (Gln, Q)
n = 1 (0.6%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.6%)
Arginine (Arg, R)
n = 3 (1.8%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 0 | 3 | 1 | 0 | 3 | 2 | 5 | 1 | 0 | 12 | 0 | 3 | 14 | 10 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 3 | 0 | 7 | 0 | 2 | 4 | 3 | 1 | 6 | 13 | 2 | 0 | 0 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 3 | 6 | 0 | 2 | 0 | 4 | 0 | 5 | 4 | 3 | 16 | 1 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 4 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 12 | 25 | 59 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 28 | 20 | 81 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 68 | 6 | 30 | 64 | ||||||||||||
| Total protein-coding genes (size: 11299 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 208 (5.53%)
Alanine (Ala, A)
n = 253 (6.72%)
Serine (Ser, S)
n = 268 (7.12%)
Threonine (Thr, T)
n = 378 (10.04%)
Cysteine (Cys, C)
n = 29 (0.77%)
Valine (Val, V)
n = 148 (3.93%)
Leucine (Leu, L)
n = 650 (17.27%)
Isoleucine (Ile, I)
n = 309 (8.21%)
Methionine (Met, M)
n = 204 (5.42%)
Proline (Pro, P)
n = 208 (5.53%)
Phenylalanine (Phe, F)
n = 214 (5.69%)
Tyrosine (Tyr, Y)
n = 121 (3.21%)
Tryptophan (Trp, W)
n = 105 (2.79%)
Aspartic acid (Asp, D)
n = 63 (1.67%)
Glutamic acid (Glu, E)
n = 83 (2.21%)
Asparagine (Asn, N)
n = 144 (3.83%)
Glutamine (Gln, Q)
n = 95 (2.52%)
Histidine (His, H)
n = 110 (2.92%)
Lysine (Lys, K)
n = 95 (2.52%)
Arginine (Arg, R)
n = 70 (1.86%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 131 | 178 | 181 | 114 | 136 | 229 | 12 | 137 | 92 | 3 | 32 | 34 | 67 | 15 | 81 | 133 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 23 | 15 | 14 | 62 | 102 | 81 | 8 | 44 | 45 | 94 | 25 | 48 | 73 | 87 | 0 | 74 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 138 | 158 | 8 | 43 | 88 | 89 | 4 | 14 | 30 | 46 | 75 | 12 | 22 | 52 | 92 | 40 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 70 | 75 | 8 | 20 | 43 | 90 | 5 | 8 | 14 | 44 | 4 | 1 | 0 | 7 | 2 | 93 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 755 | 974 | 1175 | 861 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 457 | 1063 | 720 | 1525 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 151 | 1265 | 1525 | 824 | ||||||||||||
>NC_026049.1 Pelusios castaneus voucher AHNU26080283 mitochondrion, complete genome GTTATTGTAGCTTACACTCCTCAAGCATGGCACTGAAGATGCCAAGATAGATCAAAGAATCTCATTAACA TAAAGATTTGGTCCTGGTCTTACTGTTGTTTTTTACTGAACTTACACATGCAAGTATCCGCACCCCAGTG AGGAGTTAACCCAGAATTACTACAAAACATAGTAAAAGGAGTTGGTATCAGGCTCATCATAATAGCCCAA AACACCTGGCCACGCCACACCCACAAGGGATTGCAGCAGTGACAAAAATTAAGCTATGAGCGAAAGCTCG ACTTACTTACAGTAATAAAGGGCTGGTAAACCTCGTGCCAGCAACCGCGGCTACACCAGGAGCCCAAAAC AACAGCCCTACGGCGTAAATTGTGGCTAGAATTAACAAAAAAAATTAAGGTGGACCCTCTACCTCTTTGT AATAAGACTGTGTTCAAAGTTACTCCAATGTAAAAACAACCTTAATCCTACCGCTCATCCGAACCCACGA TAGCTAAGGCACAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAATCATGATATTTCACACAACA TAAATATCCGCCAGAGAACTACGAGCTTGTAGCTTAAAACTCAAAGGACTTGGCGGTGTCCCACACCCTA CTAGAGGAGCCTGTTCTATAAGCGATAATCCACGATAAACCTTACCACCCTTTGCCATATCAGCCTATAT ACCGCCGTCTCCAGCTTACCTTATGAAAGCTAAAAAGTAAGCAAAATAGCCCTCTACAGCTAGTAAGTCA GGTCCAGGTGTAGCCAATAGAGTGGATGTAATGGGCTACATTTTCTAAAATAGAAATATTCACGAACAGA CCCTTGAAACAGGGACTAAGAAGCAGGATTTAGCAGTAATCTAGGAATAGAGAGCCTATATTAAGCCGGC CCTGGGACAAGCACACACCGCCCGTCACCCTCCTCAACAAAACTAATAAACCCCTACATAAACAAGTAAA CAAACAAAGAGGAGACAAGTCGTAACAAGGTAAGTGTACCGGAAGGTGTACTTGGAATACCCAAAATATA GCTTACCCCTTAAAGCAATCAGCTTACACCTGAACGATGTCCAAAAATGGGCTATTTTGAGCAACACAGC AGCCCTACCCCCCACCTCCTCTCTCCACCCCAATAACCTCTTTACACCTTAATCCTTAAAACATTATATA AACTTAGTATAGGAGATAGAAAAGATTTTTAGAAGCTTTAAAGACAGTACCGCAAGGGAAAGCTGAAAAA CATGAAACAATCACCAAGCAAAAAAAAGCAAAGATAAACCCTTGTACCTTTTGCATCATGATTTAGCTAG CATAACCGAGACAAAAAGAATTAAAGCCTTTTTCCCCGAAACTAGATGAGCTATTTTAGGGCAACCTTAA CAATGGTTACAATCCGTCTCTGTGGCAAAAGAGTGGAAAGACCCTTAAATAGAGGTGAAAAGCCAAACGA ATCTAGTGATAGCTGGTTGCTCAACAAAAGAATAATAGTTCCACCTTAAATCATCCCATACGCAATACAT AGCCCCATGAAAGATTTAAGAGCTACTCAATTAGGGAACAGCCTGATTGAGAAGGGATACAACCCATAAT GGAGAATCAACTCAACAAAAATTAAATAGTAGGCCTTAAAGCAGCCACCACCCAAGACAGCGTTAAAGCT CACACACCCTAAATATCAAAACCTTTGTCCATTCCCAAGTACAATTGAGCCATTCTACCCCTCTAGAAGA ACCAATGCTAAAATTAGTAACAAGAAGACTTTTTCTCAACGCACTAGCTTACATTAGTTCAGAAATACTA CTAATTATTAACGAAACAAATACTACAAAAATTTTAAACAGAACATATAACAACACAACCGTTAACCCAA CACAGGAGTGCCAACTAGAAAGATTAAAATTTGTAAAAGGAACTAGGCAACTTAAGAACCCGACTGTTTA CCAAAAACATAGCCACTAGCCCTACGAGTATTAGAGGTAACGCCTGCCCAGTGATTTATTAAACGGCCGC AGTAACATGACTGCGCGAAGGTAGCATAATCACTTGTCTTTTAAATAGAGACTGGAATGAATGGCTACAC GAGGTTCTATCTGTCTCTTACAAACAATCAGTGAAATTGATCCCCTCGTGCAAAAGCGAGAATGGCCTCA TAAGACGAGAAGACCCTGTGGAACTTCAAGTACTAACCAATATATTTCTACATCTCTACCCTAAGGGAAA GAAAACCCGAAATATTCCCTGGTTATTGCTTTCGGTTGGGGCGACCTCGGAGTAAAATAAAACCTCCGAA AAGAGTATATTCTCATACTAAGAATAACATCTCAAAGTGATTAAAATCAAAACGATCCAATATATTTGAT CAACGAACAAAGCTACCCCAGGGATAACAGCGCAATCCCTTCTTAGAGTCCATATTGACGATGGGGGTTT ACGACCTCGATGTTGGATCAGGACATCCTGATGGTGCAGCAGCTATTAAGGGTTCGTTTGTTCAACGATT AATAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTATGTACGTATATTTT CCAGTACGAAAGGAACTAAAATATGCGACCTATAATCCAAATACGTCGCATCCCTCATCTATGTATTCAA CTTAACTAACATAAGGGACCCAAATTAACCATGCCTAAAGCAGGTAAATTGGGGTGGCAGAGCTTGGTCA AATGCAGAAGGCTTAAGCCCTTCACCCGGGGGTTCAACTCCCCTTCCCAATTGTTTTCCCTACTATAAAT CTACTTCAACCCTTAATAGTTATTTTACCTATTCTCGCCAGCGTAGCCTTTTTTACCTACCTTGAACGAA AAGTAATAAGCTGTATTCAACTACGCAAAGGACCCAGCACCGCTGGGCCCTTCGGCCTGCTACAACCCTT TGCAGATGGCCTAAAACTATATTCTAAAGAACCAATCTACCCAACAAGCTCTTCCCTTATCCTATTTACA CTAACTCCTACCATAGCACTAACATTAGCCCTCTCAGTCTGGTTACCTATACCCCTCCCATTTTCACTAG CTAACCTAAATTTAGGCCTATTATTCATCCTTTCCATGTCTAGCCTTATAGTATTTTCAATCCTTTGATC AGGATGAGCTTCCAATTCTAAATATGCCTTAATTGGAGCCCTACGTGCAGTAGCCCAAACCATCTCCTAC GAAATCACTTTAGGCCTTATCCTAATTACCATAACCTTATTTTCCGGGGGTTTCAACATACGAACATTCA TTACAACACAAGAACCCATTTACCTAATCTTCGCTTCATGGCCCCTAGCAATAATATGATATGTCTCCAC CTTAGCTGAAACAAATCGAGCGCCATTTGACCTACCAGAAGGAGAATCTGAACTAGTTTCCGGATACAAT GTCGAATACGCAGCGGGCCCTTTTACTTCATTTTTCCTAGCAGAACATGTTAATATTCTCACAATAAATA CACTTTCCACCGTCCTATTCCTAAATCCAGGTTATCTATATACCACCCCTACTATCTTCAATATCTCACT TATAACAACAGCCGCAATTCTTTCTCTAGGATTCATTTGAGTCCGAGCTTCTTACCCCCGCTTTCGATAC GACCAACTAATACACCTCCTATGAAAAAATTTCCTCCCAATAACACTAGCCCTTTGCCTATGACACCTCT CACTACTCGTCACTTTCTCAGGAATTCCCCCCATATCATAGGATACGTGCCTGAAACATTAAGGCTCACC TTGATGAGGTGAAAATAGAGACTAAAACCCTCTCGTCTCCTTAGAATAACAGGACTCGAACCTGCCCATT AGAAATCAAAATTCTATGTACACCCCCTATACTATATTCTAGTAAAGTCAGCTAATCAAGCTTTTGGGCC CATACCCCAACAATGTCGGTTTAAATCCTTCCTGTACTAATCAACCCCTATGCACGTGCAGTCATTATTT CAGGACTAACACTAGGCCCAATAATTACCATCTCCAGCAACCACTGAATCACTGCCTGATCCGGCCTAGA AATTAGTACATTAACAATAATCCCTACAATCGCCAACAAACACCACCCCCGAGCGGTCGAAGCTTCTATC AAGTATTTCCTCACACAAACAATAGCATCATACCTCATACTCTCAGCAACTCTTACAAATGCATGGCATT ATGGACAATGAGATATTCAGCTACTAACAAACCACATCTCATGTATAACCCTAACCATAGCCATGTCCAT TAAACTAGCAGTCGCCCCATTCCACTTCTGATTTCCTGAAGTACTACAAGGAGCCACTATATTAACGGCC CTACTTTTAACCACCTGACAAAAATTAGCCCCACTAACCATTCTAGTACAATGTTCACAAAACCTGAACA CCACATTATTAATCTTACTAGGAGTAACATCAATCTTAATTGGGGGTTGAGGAGGATTAAATCAAACCCA ATTACGAAAAATCATGGCATTCTCCTCTATTGCCCACTTAGGATGAATATATACCATTCTCACTTTTTCT CCAAAAATCACTCTATTAACATTCTACTTATATGTAATTATAACAACTACTACATTCCTAACAATTAACA TCCTACAAACAAGCAACATATCTACCCTTATAACATCCTGAACAAAAACACCATTCACAAATACAATAAT ATTACTTAACCTTATATCCTTAGCCGGACTACCCCCACTCACCGGATTCACACCTAAGTGGCTAATTTTA CAAGAACTCACCAAACAACATCTAACTGTAATCGCTACAGTAATAGCCTTAACCTCTCTACTAAGCCTAT ATTTCTACCTCCGCATCTCCTACCACACAATCGTCACCCTTCCCCCAACCACCTGTAACCACCACCACCA ATGACGACTTAACATAACAAACTTTACCCCTATCCTAGCAACACTTACCCTTCTAACCACTGCCCTCCTC CCACTGCTCCCCACTATAATAACCATTCCCTAAAGAAACTTAGGATCATTGACCCAATCCAGAAGCCTTC AAAGCTTCAAACAAGAGACAGACCTCTTAGTTTCTGATAAGATCTATAAGACTCTACCTTATATCAACTA AATGCAACTTAGATACTTTTATTAAGCTAAGATCTTACTAGATAAATGGGCTTTGATCCCATAAATAATT AGTTAACAGCTAACTACCCTACTCAACTGGCTTTTATCTACAGACCCTGATACTAATTTAAAGTATTACT TCAGATTTGCAACCTGATATGATATTCACCACAGGACCCTAGTAAGAAGAGGAATTAAACCTCTGTAAAA AGGTTTACAACCTAACGACTCAACACTCGACCATCTTACTTATGAACTTAAACCGCTGATTATTCTCCAC CAACCATAAAGATATTGGCACACTTTACCTAATTTTTGGAACCTGGGCAGGAATAATCGGTACCGCCCTT AGTCTTCTTATTCGAACTGAACTTAACCAACCAGGAAATCTTCTCGGTAGTGACCAAGCCTACAACGTCA TTGTCACAGCCCATGCTTTCATCATAATCTTCTTTATAGTCATACCCATCATAATCGGAGGATTCGGAAA CTGATTAATTCCCCTAATAATTGGAGCCCCAGACATAGCATTCCCACGTCTAAATAACATAAGCTTCTGA CTCCTACCCCCATCACTACTCCTCATGCTCGCCTCATCCATAATTGAAGCTGGAGCTGGAACAGGTTGAA CAGTTTACCCTCCCCTATCAGGCAACCTAGCCCATGCTGGCGCATCCGTAGATCTAGCTATCTTCTCACT ACACCTAGCAGGAGCATCCTCCATCCTAGGGGCCCTCAACTTCATCACCACTGTAATCAACATAAAAACT CCCAATATAGATTTCCTTGATATACCATTATTCGTCTGATCCGTATTAATTACAGCTATTTTACTACTCT TATCCCTTCCAGTACTTGCAGCAGGTATTACTATACTTCTAACAGATCGTAACCTAAACACAACCTTCTT CGACCCTTCAGGTGGAGGAGACCCAATCCTATATCAACACTTATTCTGGTTCTTTGGTCATCCTGAAGTA TATATTCTTATTCTCCCTGGCTTCGGTGTAATTTCCCATGTCGTTACTTACTATTCAACAAAAAAAGCAC CCTTTGGTTATATCGGAATAGTTTGAGCCATAGCATCAATCGGATTCCTAGGTTTTATTGTCTGAGCACA CCATATATTCACTGTAGGAATAGATGTAGACACACGAGCCTACTTCACATCAGCAACAATAATTATCGCC ATCCCAACCGGTGTAAAAGTATTCAATTGACTTGCCACCATTCATGGAGGACTAATCAAATGAGAAGCCC CAATACTATGAGCCCTTGGCTTTATCTTCCTATTCACCATTGGGGGTCTCACTGGAATCGTTCTTGCCAA TTCATCATTAGATATTGTATTACACGACACCTACTATGTAGTAGCCCACTTCCACTATGTTCTTTCCATA GGTGCTGTCTTCGCCATCATAGCAGGATTTACCCATTGATTTAGCCTCTTTACAGGGTATCTCCTACATT CAACATGAACTAAAATCCACTTCGCAACAATATTTATTGGAGTAAACCTAACTTTCTTCCCCCAACATTT CCTAGGCCTAGCCGGCATACCTCGACGCTACTCCGATTATCCAGATGCTTATACCCTCTGAAACTCCATC TCATCTATAGGTTCTATAATATCCCTAATCGCAGTTATCATAATAGCATTCATTATCTGAGAAGCCCTTT CATCAAAACGAAACGCAATCGTAACTCAACAAATATCCACCAACATAGAATGAGTTTACTCTTGCCCTCC ACCCAACCACACACACATTCAAGTCCCACACTTACTTCGTACAAGAAAGGAAGGAATCGAACCCCCTTAA ATTGGTTTCAAGCCAACCGCATAACCATTATACTACTTTCTTAAAAGACGTTAGTAAAATATTACATACC CTTGTCAAGGTTAAATTATAGGTTAAACCCCTTTACGACTTACATGCCCACCCCTAACCAAACAAATTTT CAAGACGCTGCTTCTCCCCTTATAGAAGAACTTACCTACTTCCATGACCATACACTAATAATTGTACTAA CAATTAGTTTACTTGTACTATACATCCTTCTTTCAATATTAACCACAAAACTTACACATACAAACACCAC AAACGCCCAACAAGCTGAAATAATTTGAACTATCCTCCCCGCCATTATTCTCATCACCATCGCACTCCCA TCATTACAAGTACTCTACCTAATAGACGAAATCAATAACCCCCATCTAACAATCAAAACTATAGGTCACC AATGATATTGAACCTACGAATATACAGATTACGAAGCACTAGAATTTGACTCATACATAATCCAAACACA AGACCTTCCCTCAGGTCACCTACGATTACTTGAAGTAGACCATCGAATGGTAACACCCATAGAATCCCAC ATCCGAATATTAGTCTCAGCCGAAGATGTCCTACACTCATGAGCAATCCCCTCCCTAGGACTAAAAACTG ACGCTATCCCAGGCCGCCTAAACCAAACAAACTTTATCCTTATACAATCCGGCGTCTTCTATGGTCAATG TTCAGAAATCTGCGGAGCTAACCACAGCTTCATGCCCATCGTTGTCGAATCCTTACCCATTAATGACTTC GAACGTTGATCCGCAATAATTCCTTCATTGTCACTAAAGAAGCTTAATGTATACAGCACTAGACTTTTAA TCTAGAGAAGAGTATAAACACTCCTTAGTGATATACCACAATTAAACCCCTACCCATGATTTTCCACCTT CCTTACCTCTTGATTAATCCTTATCATTCTACTCCTAAAAATCAAATCCCATGTATCAAACAACCCACCA ACAAATAAAAAAAATACTCTCACAACCCCATCCCCATGAATCTGACCATGAACTTAACCTTATTCGACCA ATTCTCATCCCCAAGCACCTTAGGTATCCCACTAATCACAATAGCCCTACTCTTACCCACACTTATTTTC CCTACAAAAACCAATCGATGACTCACAAACCGCCTAGTAACCATTCAATCAAAAACAATTTATATTTTTA CAAAACAACTCATACTACCAATTCCCCAACCTGGCCATCGATGATCCCTAATCTTAACATCACTAGTAAC CCTTCTCTTAACTTCTAACCTACTTGGATTGTTACCTTACACCTTCACCCCTACCACACAACTCTCCATA AACTTAGGATTTGCTTTCCCTATATGATTAGCCACATTATTAATTGGCCTCCGAAACCAACCAACCACAT CACTCGCACACCTACTACCAGAAGGAACTCCAACTCTACTAATCCCAACACTTATCCTTATTGAATCCAT CAGCCTAGTAATCCGTCCTTTAGCATTAGGAATCCGAATCTCAGCTAATCTAACAGCCGGCCACCTATTA ATACAACTCACTGCCTCCGCCACATTATTACTAACCACCACAATACCTGCCCTATCCCTCATAACCATAA TCCTACTATTTTTACTTACTCTTCTAGAAACAGCAGTAGCCATGATCCAAGCCCTAGTATTTGTACTCCT CCTAAGCCTCTACCTACAAGAAAATACCCATAACTAAACAACTTCACCCCTTCCATATAACCAACCCTAG CCCATGACCCCTTACAGGTGCAACAGCAGCACTCCTAATAACTTCTGGATTAACCATATGATTCCACTAC AACAATAGCCAACTCCTCATACTCGGCCCATTAGTCATACTATTAACCCTCACCCAATGATGACGAGATG TTGTACGAGAAAGCACATTCCAAGGTCATCACACACCCTCAGTCCAAAATAACCTACGCTATGGTATAAT TCTATTTATCATCTCCGAAATCTTCTTCTTTATAGGATTCTTCTGAGCTTTCTACCACTCAAGCTTATCC CCAACAACAGAACTAGGAAACATTTGACCCCCAACAGGAATCACACCCCTTAACCCCTTTGAAGTCCCAT TGCTAAATACTGCTGTACTCCTTGCTTCAGGAGTAACTATCACTTGAGCTCACCACAGCCTAATAGAAGG AAACCGAACACACACCCTACAAGCACTTACCCTGACCATCATACTAGGCCTTTACTTCACCATTCTACAA ATAATCGAATATTTCGAAGCTTCTTTCACAATCGCCGATGGCATTTATGGCTCCACGTTCTTCGTAGCTA CAGGCTTTCATGGTTTACATGTCATCATTGGTTCAACATTCCTAATTATTTGCCTCATACGCCAACTTAA GTACCACTTCACCTCACACCACCATTTCGGATTTGAAGCAGCTGCATGATACTGACATTTTGTAGACGTC ATTTGATTATTCCTCTACCTATCCATCTACTGATGAGGCTCCTATTCTTCTAGTATATTAGTACAAGTGA CCTCCAATCACTTAGTTTCAGACCCCTCTGAAGAAGAATATTTTAATAACCTAACTAAAACTTTTCTACT CACCTCTACACTCTCAATTATCCTAACAATTTTAAATTCCCTAATTGCCCAAAAAAACCCAACCCAAGAA AAACTATCCCCCTACGAATGTGGATTCAACCCCCTTAGAACCAGCTTGATTACCATTCTCAGTTCGATTC TTCCTTGTTGCAATCCTATTTCTCCTTTTCGACCTCGAAATCGCACTCCTCCTCCCACTACCATGAGCTA CCCAACTCCCATCACCAACAATAACCTTAATCTGAACTACCACCCTCCTTACACTCCTTACCGCAGGATT CATCTACGAATGAATCCAAGGAGGACTAGAATGACCAGACTGGGTATCTAGTCCAAAACAAGACCACTAA TTTCGGCTTAGTAAATCATGTATATAACCATGGCTACCTTGTATACCACACTATCATCTAATTCTCCTTA TTGGTTTTCTTATCAGCCTTGTAGGATTTACCTGCCACCAAAAACACCTAATCTCAACCCTACTAGCTCT TAGAAGGTATAACACTCACTATATTTATCGCAATCTCAATAGAAGCCCTCCAACTACAAACGGCGCCCCT TATGCTATCTGCAATCCTAATACTCACATTCTCCGCTTGCGACACCAGTGTCGGCCTCTCATTATTAGTA GCTGCATCACGAACACATGGGCTTAGATATATTAAAAAACCTGAATCTACTCCAATGTTAAAATTATTAT TACCTACAATCATACTGCTACCTACTACTTGACTTTGTAAAAAAAACCACCTCTCACATACAACTCTCCT ATTCAGCTTTACCATTGCATTTCTTAGTCTACAATGATTCAAACCCAAATTTGAATTAACAAACACTTTC TCTAATATCTACATAGGAGTAGACCCACTCTCAACTCCATTACTCATCCTAACCTCCTGAATAACCCCAC TAATAATTCTCGCCAGCAAAAACCACTTAACCCCAGAACCACTTTCGCGCAAACGAACCTTTACCACAAT AATCATCTCCCTACAAATTTTCCTAACCTTAGCATTCTCAGCTTCAGAAATAATATTATTTTTTACAATA TTCGAAGCAACCCTAATCCCAACCTTAATTATCATCACACGGTGAGGGAACCAAATAGAACGATTAAATG CTGGTACTTACTTCTTATTCTACACCCTAATCGGTTCCCTCCCACTTCTAATTGCTCTCACCTCATTATA TACTCATCATAACACACTCTCCCTCTTTATCTTACAGCTAAACCCTCCCCACCTCACAAACTCCTGAGCC CATACAATATGGTGACTCGCCCTACTAACAGCATTCATAATTAAAATACCACTCTATGGTCTACACCTAT GACTCCCAAAAGCACACGTAGAGGCCCCTATCGCAGGTTCTATGATCTTAGCTGGAGTCTTACTAAAACT AGGAGGATATGGTATCATCCGAATAACCTTAATACTTAACCCAGTAACAAAAACACTTAGCTACCCCTTC ATAGCCCTCTCTTTATGAGGCATTATTATAACAGGCCTAATCTGCCTACGACAAACAGACCTAAAATCAC TAATTGCCTATTCCTCAGTAGGCCACATAGGTCTAGTAATTTCTGCAGCACTCCTACAAACACCTCTATC AATTACAGGAGCCACCATTCTAATAATTGCCCACGGCTTATCATCATCCATACTCTTCTGTTTAGCTAAT ACAAACTACGAACGAACCCATAACCGAACCCTTCTATTAACGCGTAGCATACAAACCCTACTACCCCTAA TAACCCTCTGATGATTATTAGCTAACTTAATAAATATAGCCCTTCCCCCCACAATTAACCTTATAGGAGA ACTGACAATCATTGCATCCTTATTCAACTGAGCCAATATTACTATTCTATTAACTGGACTAGGCACACTA ATCTCAGCCCTCTACTCTCTTCACATGTTCTCATCTACACAGTGAGGGGGAACTCCCCCACCCCACATAC ACACTATCACCCCTTCCCACACACGAGAGCACCTAATCATAACACTCCATATTATCCCTTTAATCCTACT AATAGTAAAACCCCAACTTATAACCATCTCGTTAGTATAGTTTCAACAAACATTAGAATGTGAGCCTAAA ATTAGAGGTGTAAACCCTCTTACTAACCGAGGAAGAAAACAAGAAACCGCTAACTTCTAACCCTGAGACT ACACCCCCCAGCTTCCCCACTTTCAAAGGACAGAAGTAATCCTGTGGCTTTAGGAGCCATTTCCCCTTGG TGCAACTCCAAGTGAAAGTAACATGCCAAACCTTCAACTCATCCTAAAAACAATTCTCATTTCCGAATTG CTAATCCTAGCACTATCAGCACTTACAACAATACTTCCTCCCCTACTCAAAAAACTTACTTGAGACCCAG AAAAAGCCATAACCACAACACTCCGACTATCCTTAATCTCCATTCTCATCCATATCTTAATTGAAGAGCC TGCCTCAATCTCATCTCTTTATTCACCAACAATGCTAAACCTAAGTATAACCATTAAAATTGACTATTAT TCCCTAATTTTCACTTCCATTGCTCTCTTCATCACTCGAGCCATCCTACAATACACAAAGTGATACATAG CATCAGATCGAGACCTACAAAAATTCTCCATATTCCTTCTCCTCTTCTTAATATCAATAATCATATTTAT CACCGCCAACAACTTCTTCCCTATATTAGTTGGCTGAGAAACCATAGGACTAATATCCTACCTCCTTATC TCTTGATGGCACGGACGAGCAGAAGCTACCACATCCGGCCTTAAAGCCATCTTATACAATCGACTTGCTG ACATTGGACTTATCCTCACCTTTACCTGATGTCTCACTTACATATCCTCCCTTGACCTAGATACATTCTT TGCCTCAGCTACACTCGTAACAGGAGTCCCAATCCTAGGAATACTAATAGCAGCCATAGGAAAATCAGCC CAATTTGGTATACACCCATGACTTCCTGCCGCCATAGAAGGCCCCACACCCGTCTCAGCCCTACTACACT CTAGCACAATAGTAACTGCTGGAATTTATCTATTAATTCGAATACATCCTATTCTATCACAAATTAAAGG TTTTAACTTAGCCTGCCTAACCTTAGGAGCTGCCACCGCCCTATACGCCTCACTTATAGCCCTAACACAA AATGACCTCAAAAAAATTATTGCCTACTCCACACTCAGCCAATTAGGATTTATAATAGCTACTGTAGGAC TTAATTTCCCAGACGTAGCCTTTATACACCTCTGCATACACGCTTTCTTCAAAGCAATAATATTCCTATG CGCAGGCTCCATCTCCCATACTTTATTTGGAGAACAAGACATCCGAAAAATAGGAGGTATAATCAAAGTA ATCCCTATCACAGCCTCCTGTTTTACCCTCTCCACCCTAGCCCTTGCCGGCTTCCCATTCCTAACAGGAT TCTTCTCAAAAGACCTCATCATCGAAATAATCCTCTTATCAAAAACCAATACACTCTGAGCAACCATATT ACTCACCTCAGCCATATTCACCGCAATCTATAGCCTACGAATAACACTCCGAATCCTTACAGGCACTCCA TGTTACAACAACCTATTAATGTATAAAGAAAATCCTACATGCACCAAACCAATTATAAAACTAGCATTAG CAAGTATTATTACAGGATCCCTATTCTCATTATTCACTCCACCAATTTGCCTTCCACTACAAACTCTCCC CCCCACTATCAAACTTGCAGCACTAACCATTACCTTTATAAGCGCATTCTCCGCAATATACTTGATTTCC CTAGCCAATAGTAAACCCCTACCCAAAAATACTATCCAAGACCACGTACTTCAAACAGCAAAAGACCTAG ACATCCTTACCCACCGCTACTTAATAACAAAACTCCTAAAAGGAGGTAATAAAACAGCCCTCCAAATCCT AGACAATTATTGAAAACTCAAAGCAGGACCAAAATACATCGAAAAAACTCAAATCCCCATGTCTATAAAA ACATCCACCCAAAGTGGTCTCATCAAAAACTACTTTATAGCCTTCTTAGTTGCTTTCGTAGTTATCTTGT ATATCATACTTTTCTACTAATGACCCCCCCCAAATTTCTAAAGGCACTTATCCAATGGTTACACTTAACC ATTAAAGTAGATCACTTCTACCAGAAATTAAGGGTCATAAAAACGCCTGTGCCCCTCCCCTTTTACTAAA CCCAAAAACCCCTTAAATAGCCCGACAAGCCACCCGAAACAACCCTTGCACCAGCACTAAAACAACAAAA AAAGTCAAGAATAGCCCAAATGCAGCCACCAATAACACCCAACCCCCTATCCCATATAATAAAGACAAAC CCAAAGTTTCAATCCGAGCAACAGATAGCGCCTCAATATCCCCCACCTCCCCTCACCAACCTCCACTATA CAACGTAACAACTACCCCTAACACAATATACCCGCCAAACCACAGCCCTCCCATTACATCCTCCACCACT GCAGGAAAAGGCTCCATCACCAACGTAACAGAGTAAGCAAAAATAACCAACATTCCTCCAAGATAAACCA AAAACAACATCAAAGCCAAAAAAGAACTTCCCTTTCAAGCCAATATTCCACACCCCGTCGCCGCCGCACA TACCAAACTCACCACCCCGTAGTAAACTGAAACATTTGAAGACACCCCAATCAATCAAAACACATAACTA ACCCCCAATAGCATAGAAACGTATATCATAGTACTTGTCCGGATTCTAACCAAAACCTTTGGTATGAAAA ACCAACGTTGCATTCAACCACAAGTACATTGCACCTAAAACACAACCCACTCCTAAAACTCATCAATAAA TCTCTTATCAACCTCCCAAGCCCCTCCAACATCTCTGCCTGATGAAACTTTGGCTCCCTACTAAGCATAT GCTTAATCCTACAAATTTCCACAGGCATCTTTTTAGCAATACACTACACACCAAACATCACCATCGCCTT CTCATCAGTTACCCATATTGCTCGAGACGTCCAATACGGCTGACTCCTCCGAAATTTACACGCTAACGGA GCCTCTCTTTTCTTCATCTGCCTCTACCTCCACGTTGGACGAGGTATTTACTACGGGTCGTACCTTAATA AAAAAACTTGATACACGGGTGTCATCCTCCTACTCCTAACAATAGCCACAGCCTTTATAGGGTACATTTT ACCCTGAGGCCAAATATCCTTTTGAGGTGCCACAGTAATCACTAATCTCCTATCTGCCACCCCCTATGTA GGACCCACCTTAGTCCAATGAATCTGAGGAGGATTCTCAGTGGACAACGCAACCCTAACTCGCTTCTTTA CTCTACACTTCCTGACCCCTTTTATCATTGCCGGCTTCTCTCTAATTCACCTCTTATTCCTCCACGAAAC AGGCTCCAACAACCCCACAGGGCTCAACTCCAACTCCGACAAAATCCCATTTCACCCCTACTTCTCATAC AAAGACCTTCTAGGCATAAATTTACTCATCATTGGACTAACTATCCTAACCCTCCTCCTCCCTAACCTTT TAACAGACCCTGAAAACTTCACACCTGCCAACCCCCTAATCACCCCTCCACATATCAAACCTGAATGGTA CTTCCTATTTGCTTACGCAATCCTACGCTCCATCCCAAACAAACTGGGAGGAGTATTAGCCCTCCTAGCC TCGGTAACCATCCTTTTTCTCATACCCACCTTACACACCTCCAAACAACGCTCAACCACCTTCCGACCCT TAACCCAAATTCTACTCTGATCTCTAGCCGCCGACCTAATCATTCTCACCTGAATTGGAGCTCAACCCGT AGAGGACCCATTCATCATCATTGGACAAGTAGCCTCCACCCTCTACTTTACCTTAATCCTTCTTATAGCT CCCCTAATAGCCCACTTTGAAAACAAACTCCTGAATTACTAAAAATTTCAGTAGTTTACCCTAAAACCTT GGCCTTGTAAACCAAAAACGGCAAGTCAAACTGCCCTGAAATCAAAAAAAGGGGAATATACTCCCCTGTC GCCAACTCCCAAAGCTGGTATTTTTACTAAACTATTTTTTGCCCTAAAAAGCATGGAAACCCCCCTACAT TGCCCTCCCCCCCTCCAGTTATCCCCCCCTACCCCCCCGGAGGGGTTTTTGGCTATGTACATCGTGCATT CATCTTTTTGCCTCATGCATATATTGTAATACTACTTATTCTTGGTCGTGCATACCTATGCTTTATCGTA CCCATATGCCCTCCCTCATGCATATCATCAATTACATTCACTTTCATGGTCTCCGGACATAACCTTCGAT ATTTCACTCCCCCATGACTATTGCCACAGTATTAGGTTATTTCTTGTTTCAGCTACTCCCGTGAACCCGA CATCCCCTGCTTAGTAGGCATACCGCCCCCAGCTTCTACGTCCATTCCTCTAATTCGTACCTCTTATGAT CTTCAAAATGCCACTGGCTGATACTTCTGGAACCCACATCTAAGACGGACATACATTGCTCTTCAGGATG CCTCTCGTTGCACTTTTAGTCAGTAAGTTCTATACACACGTTCAATAACAAGACATCATTCACTCCCAGG CATATAGCAATTTTATTTATTTTCTCACTTTCACAGCCCCATAAAGCATGGTATCCCCCGACCCCCTGAA ACTGGACCTTAGGCTAGTGGTTTACCGGGCAAGCCTCTGGTTTGGGGCTAATTAATTCATGCTTGTCGGA CATAGCATTTCCACATAAAAATCAAGAGAAAAATTTCCATGACTTTTTTTCATTATTCATTAACATCATT ACATAATACATATACACATTATACAAACAAAAAGTCCTAATTTTACTAATCTTTATATATATATATACAT ATACTTTTTAGATAAAAAGGTCCTAATTTTACTAATCTTTATATATATATATACATATACTTTTTAGATA AAAAGGTCCTAATTTTACTAATCTTTATATATATATATACATATACTTTTTAGATAAAAAGGTCCTAATT TTACTAATCTTTATATATATATATATACACATACTTTTTAAATAAAAAACCTAATTTATACCAATTTTAT ATATATACATATACTTTTTAGATAAAAAGGTCCTAATTTTACTAATCTTTATATATATATATATACACAT ACTTTTTAAATAAAAAACCTAATTTATACCAATTTTATATATATACATATACTTTTTAGATAAAAAGGTC CTAATTTTACTAATCTATAAAAGGTATTTAC
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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