Viewing data for Iguana iguana


Scientific name Iguana iguana
Common name Green iguana
Maximum lifespan 19.80 years (Iguana iguana@AnAge)

Total mtDNA (size: 16633 bases) GC AT G C A T
Base content (bases) 7514 9119 5275 2239 3741 5378
Base content per 1 kb (bases) 452 548 317 135 225 323
Base content (%) 45.2% 54.8%
Total protein-coding genes (size: 11352 bases) GC AT G C A T
Base content (bases) 5264 6088 3881 1383 2549 3539
Base content per 1 kb (bases) 464 536 342 122 225 312
Base content (%) 46.4% 53.6%
D-loop (size: 1191 bases) GC AT G C A T
Base content (bases) 407 784 261 146 345 439
Base content per 1 kb (bases) 342 658 219 123 290 369
Base content (%) 34.2% 65.8%
Total tRNA-coding genes (size: 1520 bases) GC AT G C A T
Base content (bases) 650 870 395 255 365 505
Base content per 1 kb (bases) 428 572 260 168 240 332
Base content (%) 42.8% 57.2%
Total rRNA-coding genes (size: 2514 bases) GC AT G C A T
Base content (bases) 1159 1355 714 445 475 880
Base content per 1 kb (bases) 461 539 284 177 189 350
Base content (%) 46.1% 53.9%
12S rRNA gene (size: 952 bases) GC AT G C A T
Base content (bases) 429 523 261 168 190 333
Base content per 1 kb (bases) 451 549 274 176 200 350
Base content (%) 45.1% 54.9%
16S rRNA gene (size: 1562 bases) GC AT G C A T
Base content (bases) 730 832 453 277 285 547
Base content per 1 kb (bases) 467 533 290 177 182 350
Base content (%) 46.7% 53.3%

ATP6 (size: 682 bases) GC AT G C A T
Base content (bases) 316 366 239 77 170 196
Base content per 1 kb (bases) 463 537 350 113 249 287
Base content (%) 46.3% 53.7%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 75 93 65 10 30 63
Base content per 1 kb (bases) 446 554 387 60 179 375
Base content (%) 44.6% 55.4%
COX1 (size: 1548 bases) GC AT G C A T
Base content (bases) 732 816 468 264 406 410
Base content per 1 kb (bases) 473 527 302 171 262 265
Base content (%) 47.3% 52.7%
COX2 (size: 688 bases) GC AT G C A T
Base content (bases) 314 374 222 92 159 215
Base content per 1 kb (bases) 456 544 323 134 231 313
Base content (%) 45.6% 54.4%
COX3 (size: 786 bases) GC AT G C A T
Base content (bases) 377 409 251 126 191 218
Base content per 1 kb (bases) 480 520 319 160 243 277
Base content (%) 48.0% 52.0%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 540 600 389 151 283 317
Base content per 1 kb (bases) 474 526 341 132 248 278
Base content (%) 47.4% 52.6%
ND1 (size: 966 bases) GC AT G C A T
Base content (bases) 456 510 334 122 227 283
Base content per 1 kb (bases) 472 528 346 126 235 293
Base content (%) 47.2% 52.8%
ND2 (size: 1038 bases) GC AT G C A T
Base content (bases) 463 575 365 98 197 378
Base content per 1 kb (bases) 446 554 352 94 190 364
Base content (%) 44.6% 55.4%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 164 182 127 37 84 98
Base content per 1 kb (bases) 474 526 367 107 243 283
Base content (%) 47.4% 52.6%
ND4 (size: 1381 bases) GC AT G C A T
Base content (bases) 622 759 492 130 309 450
Base content per 1 kb (bases) 450 550 356 94 224 326
Base content (%) 45.0% 55.0%
ND4L (size: 295 bases) GC AT G C A T
Base content (bases) 134 161 102 32 69 92
Base content per 1 kb (bases) 454 546 346 108 234 312
Base content (%) 45.4% 54.6%
ND5 (size: 1809 bases) GC AT G C A T
Base content (bases) 825 984 627 198 387 597
Base content per 1 kb (bases) 456 544 347 109 214 330
Base content (%) 45.6% 54.4%
ND6 (size: 525 bases) GC AT G C A T
Base content (bases) 252 273 204 48 43 230
Base content per 1 kb (bases) 480 520 389 91 82 438
Base content (%) 48.0% 52.0%

ATP6 (size: 682 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.98%)
Alanine (Ala, A)
n = 17 (7.52%)
Serine (Ser, S)
n = 11 (4.87%)
Threonine (Thr, T)
n = 26 (11.5%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 9 (3.98%)
Leucine (Leu, L)
n = 53 (23.45%)
Isoleucine (Ile, I)
n = 27 (11.95%)
Methionine (Met, M)
n = 9 (3.98%)
Proline (Pro, P)
n = 17 (7.52%)
Phenylalanine (Phe, F)
n = 10 (4.42%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 3 (1.33%)
Lysine (Lys, K)
n = 3 (1.33%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 17 6 5 10 27 5 6 7 2 2 3 3 1 4 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 2 12 3 0 0 5 3 1 1 5 10 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 11 1 1 2 5 0 0 3 1 2 2 0 2 6 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 4 0 0 1 2 1 0 4 1 0 0 0 0 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
40 81 76 30
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
20 68 31 108
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 90 89 31
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPSPWFLILLLIWTTLATTFLNKTIHSKFPSPPTPQKPNQKPTEPWTWPWH*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 8 (14.55%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 7 (12.73%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 11 (20.0%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.82%)
Asparagine (Asn, N)
n = 3 (5.45%)
Glutamine (Gln, Q)
n = 3 (5.45%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 4 (7.27%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
0 3 0 1 1 3 1 1 3 0 0 0 0 0 1 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 0 0 0 0 0 0 0 5 6 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 3 0 0 0 2 0 0 1 0 0 0 0 0 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 0 0 0 4 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
2 22 20 12
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 22 14 14
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 21 29 4
COX1 (size: 1548 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.13%)
Alanine (Ala, A)
n = 42 (8.16%)
Serine (Ser, S)
n = 32 (6.21%)
Threonine (Thr, T)
n = 40 (7.77%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 36 (6.99%)
Leucine (Leu, L)
n = 60 (11.65%)
Isoleucine (Ile, I)
n = 40 (7.77%)
Methionine (Met, M)
n = 30 (5.83%)
Proline (Pro, P)
n = 28 (5.44%)
Phenylalanine (Phe, F)
n = 40 (7.77%)
Tyrosine (Tyr, Y)
n = 20 (3.88%)
Tryptophan (Trp, W)
n = 17 (3.3%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 14 (2.72%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.69%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 24 23 8 11 24 7 8 7 1 5 13 16 2 15 25
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 1 0 7 22 12 1 4 19 18 6 3 17 6 2 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 18 1 5 10 12 1 0 4 4 16 3 2 1 13 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 7 3 3 12 8 0 1 2 5 0 1 0 0 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 113 137 116
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
78 138 94 206
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
36 217 179 84
COX2 (size: 688 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 12 (5.26%)
Serine (Ser, S)
n = 18 (7.89%)
Threonine (Thr, T)
n = 23 (10.09%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.82%)
Leucine (Leu, L)
n = 30 (13.16%)
Isoleucine (Ile, I)
n = 21 (9.21%)
Methionine (Met, M)
n = 12 (5.26%)
Proline (Pro, P)
n = 14 (6.14%)
Phenylalanine (Phe, F)
n = 9 (3.95%)
Tyrosine (Tyr, Y)
n = 8 (3.51%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 11 (4.82%)
Glutamic acid (Glu, E)
n = 13 (5.7%)
Asparagine (Asn, N)
n = 6 (2.63%)
Glutamine (Gln, Q)
n = 8 (3.51%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 2 (0.88%)
Arginine (Arg, R)
n = 5 (2.19%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 13 9 1 12 10 3 3 7 1 1 4 6 0 4 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 1 4 7 0 1 4 2 1 1 6 6 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 12 1 1 7 5 1 0 4 2 6 1 1 2 4 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 13 0 4 7 2 0 1 2 2 0 0 0 0 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
55 64 68 42
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 63 59 83
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 95 88 33
COX3 (size: 786 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.66%)
Alanine (Ala, A)
n = 21 (8.05%)
Serine (Ser, S)
n = 14 (5.36%)
Threonine (Thr, T)
n = 23 (8.81%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.51%)
Leucine (Leu, L)
n = 33 (12.64%)
Isoleucine (Ile, I)
n = 16 (6.13%)
Methionine (Met, M)
n = 8 (3.07%)
Proline (Pro, P)
n = 11 (4.21%)
Phenylalanine (Phe, F)
n = 24 (9.2%)
Tyrosine (Tyr, Y)
n = 12 (4.6%)
Tryptophan (Trp, W)
n = 12 (4.6%)
Aspartic acid (Asp, D)
n = 4 (1.53%)
Glutamic acid (Glu, E)
n = 9 (3.45%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 7 (2.68%)
Histidine (His, H)
n = 16 (6.13%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 14 6 2 11 15 3 1 7 0 3 3 10 1 11 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 2 1 12 8 0 0 7 10 3 0 4 7 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 11 0 2 5 3 0 2 2 1 11 2 1 0 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
15 9 0 0 4 2 0 0 1 4 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 70 58 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 65 56 98
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 116 104 30
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 22 (5.8%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 30 (7.92%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 22 (5.8%)
Leucine (Leu, L)
n = 66 (17.41%)
Isoleucine (Ile, I)
n = 30 (7.92%)
Methionine (Met, M)
n = 10 (2.64%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 30 (7.92%)
Tyrosine (Tyr, Y)
n = 13 (3.43%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 7 (1.85%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 20 (5.28%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 23 7 7 12 33 4 8 7 0 1 9 11 1 1 29
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 3 16 2 1 2 9 10 3 2 10 10 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 11 0 4 7 10 2 0 1 2 11 1 2 1 19 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 7 0 2 5 8 1 0 1 6 1 0 0 0 1 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
82 106 100 92
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
48 98 76 158
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 185 141 33
ND1 (size: 966 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.67%)
Alanine (Ala, A)
n = 27 (8.41%)
Serine (Ser, S)
n = 25 (7.79%)
Threonine (Thr, T)
n = 25 (7.79%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 13 (4.05%)
Leucine (Leu, L)
n = 59 (18.38%)
Isoleucine (Ile, I)
n = 26 (8.1%)
Methionine (Met, M)
n = 15 (4.67%)
Proline (Pro, P)
n = 24 (7.48%)
Phenylalanine (Phe, F)
n = 18 (5.61%)
Tyrosine (Tyr, Y)
n = 10 (3.12%)
Tryptophan (Trp, W)
n = 9 (2.8%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 11 (3.43%)
Asparagine (Asn, N)
n = 12 (3.74%)
Glutamine (Gln, Q)
n = 8 (2.49%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 8 (2.49%)
Arginine (Arg, R)
n = 8 (2.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 21 11 5 10 36 5 3 8 0 1 5 6 1 5 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 3 16 7 1 2 8 4 1 4 9 11 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 12 1 2 11 9 1 0 2 0 10 1 0 1 11 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 0 4 8 0 1 2 4 1 0 0 1 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
70 99 88 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
35 99 57 131
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 136 138 31
ND2 (size: 1038 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 30 (8.7%)
Serine (Ser, S)
n = 20 (5.8%)
Threonine (Thr, T)
n = 71 (20.58%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (0.58%)
Leucine (Leu, L)
n = 61 (17.68%)
Isoleucine (Ile, I)
n = 24 (6.96%)
Methionine (Met, M)
n = 28 (8.12%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 8 (2.32%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 9 (2.61%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 11 (3.19%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 18 24 5 16 32 4 4 11 0 0 1 1 0 2 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 0 15 14 1 3 5 5 0 2 9 8 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 39 1 1 7 7 0 1 4 1 7 0 0 1 8 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 5 0 0 3 10 1 0 0 3 1 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
53 98 148 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 135 55 123
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 132 175 27
ND3 (size: 1038 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 30 (8.7%)
Serine (Ser, S)
n = 20 (5.8%)
Threonine (Thr, T)
n = 71 (20.58%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (0.58%)
Leucine (Leu, L)
n = 61 (17.68%)
Isoleucine (Ile, I)
n = 24 (6.96%)
Methionine (Met, M)
n = 28 (8.12%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 8 (2.32%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 9 (2.61%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 11 (3.19%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 18 24 5 16 32 4 4 11 0 0 1 1 0 2 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 0 15 14 1 3 5 5 0 2 9 8 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 39 1 1 7 7 0 1 4 1 7 0 0 1 8 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 5 0 0 3 10 1 0 0 3 1 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
53 98 148 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 135 55 123
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 132 175 27
ND4 (size: 1381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (3.27%)
Alanine (Ala, A)
n = 35 (7.63%)
Serine (Ser, S)
n = 30 (6.54%)
Threonine (Thr, T)
n = 61 (13.29%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 95 (20.7%)
Isoleucine (Ile, I)
n = 36 (7.84%)
Methionine (Met, M)
n = 28 (6.1%)
Proline (Pro, P)
n = 25 (5.45%)
Phenylalanine (Phe, F)
n = 17 (3.7%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 11 (2.4%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 7 (1.53%)
Asparagine (Asn, N)
n = 20 (4.36%)
Glutamine (Gln, Q)
n = 14 (3.05%)
Histidine (His, H)
n = 15 (3.27%)
Lysine (Lys, K)
n = 12 (2.61%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 26 25 10 24 45 3 13 12 2 0 5 5 0 4 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 4 2 19 13 1 0 8 6 1 1 11 12 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
28 26 1 2 10 12 0 0 6 0 13 1 0 3 17 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 7 0 0 2 11 1 0 2 7 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 146 163 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
46 145 83 186
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 201 204 40
ND4L (size: 295 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.12%)
Alanine (Ala, A)
n = 9 (9.28%)
Serine (Ser, S)
n = 7 (7.22%)
Threonine (Thr, T)
n = 13 (13.4%)
Cysteine (Cys, C)
n = 3 (3.09%)
Valine (Val, V)
n = 2 (2.06%)
Leucine (Leu, L)
n = 22 (22.68%)
Isoleucine (Ile, I)
n = 5 (5.15%)
Methionine (Met, M)
n = 9 (9.28%)
Proline (Pro, P)
n = 2 (2.06%)
Phenylalanine (Phe, F)
n = 6 (6.19%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.03%)
Glutamic acid (Glu, E)
n = 2 (2.06%)
Asparagine (Asn, N)
n = 3 (3.09%)
Glutamine (Gln, Q)
n = 3 (3.09%)
Histidine (His, H)
n = 4 (4.12%)
Lysine (Lys, K)
n = 1 (1.03%)
Arginine (Arg, R)
n = 2 (2.06%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 3 7 1 6 12 1 2 3 0 1 0 1 0 1 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 1 5 2 1 0 2 2 0 0 2 0 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 9 0 0 2 4 0 0 1 0 0 0 0 0 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
18 31 32 17
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
10 30 14 44
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 41 46 7
ND5 (size: 1809 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.65%)
Alanine (Ala, A)
n = 49 (8.14%)
Serine (Ser, S)
n = 42 (6.98%)
Threonine (Thr, T)
n = 76 (12.62%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 15 (2.49%)
Leucine (Leu, L)
n = 93 (15.45%)
Isoleucine (Ile, I)
n = 61 (10.13%)
Methionine (Met, M)
n = 25 (4.15%)
Proline (Pro, P)
n = 32 (5.32%)
Phenylalanine (Phe, F)
n = 33 (5.48%)
Tyrosine (Tyr, Y)
n = 11 (1.83%)
Tryptophan (Trp, W)
n = 10 (1.66%)
Aspartic acid (Asp, D)
n = 11 (1.83%)
Glutamic acid (Glu, E)
n = 10 (1.66%)
Asparagine (Asn, N)
n = 34 (5.65%)
Glutamine (Gln, Q)
n = 22 (3.65%)
Histidine (His, H)
n = 15 (2.49%)
Lysine (Lys, K)
n = 23 (3.82%)
Arginine (Arg, R)
n = 8 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 40 22 6 25 48 7 7 22 0 4 6 5 0 6 27
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 4 2 24 22 1 0 14 11 3 3 10 17 2 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
38 30 1 4 14 13 0 1 10 1 10 3 0 3 31 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 9 1 1 10 21 2 0 2 5 1 0 0 1 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
113 163 230 97
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
61 188 127 227
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 276 240 63
ND6 (size: 525 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 32 (18.39%)
Alanine (Ala, A)
n = 12 (6.9%)
Serine (Ser, S)
n = 16 (9.2%)
Threonine (Thr, T)
n = 3 (1.72%)
Cysteine (Cys, C)
n = 3 (1.72%)
Valine (Val, V)
n = 24 (13.79%)
Leucine (Leu, L)
n = 32 (18.39%)
Isoleucine (Ile, I)
n = 5 (2.87%)
Methionine (Met, M)
n = 3 (1.72%)
Proline (Pro, P)
n = 4 (2.3%)
Phenylalanine (Phe, F)
n = 14 (8.05%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 4 (2.3%)
Aspartic acid (Asp, D)
n = 2 (1.15%)
Glutamic acid (Glu, E)
n = 4 (2.3%)
Asparagine (Asn, N)
n = 2 (1.15%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 5 (2.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 1 1 0 0 0 1 2 0 0 13 2 1 8 14 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 3 0 6 1 1 4 8 1 1 22 1 1 0 2 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 1 9 0 2 2 3 0 9 0 3 29 2 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 4 2 0 0 0 2 0 0 3 0 1 0 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 10 17 74
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
48 32 17 78
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
82 6 9 78
Total protein-coding genes (size: 11372 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 220 (5.81%)
Alanine (Ala, A)
n = 283 (7.47%)
Serine (Ser, S)
n = 248 (6.55%)
Threonine (Thr, T)
n = 407 (10.74%)
Cysteine (Cys, C)
n = 24 (0.63%)
Valine (Val, V)
n = 162 (4.28%)
Leucine (Leu, L)
n = 644 (17.0%)
Isoleucine (Ile, I)
n = 301 (7.95%)
Methionine (Met, M)
n = 183 (4.83%)
Proline (Pro, P)
n = 219 (5.78%)
Phenylalanine (Phe, F)
n = 219 (5.78%)
Tyrosine (Tyr, Y)
n = 109 (2.88%)
Tryptophan (Trp, W)
n = 103 (2.72%)
Aspartic acid (Asp, D)
n = 64 (1.69%)
Glutamic acid (Glu, E)
n = 89 (2.35%)
Asparagine (Asn, N)
n = 141 (3.72%)
Glutamine (Gln, Q)
n = 103 (2.72%)
Histidine (His, H)
n = 108 (2.85%)
Lysine (Lys, K)
n = 84 (2.22%)
Arginine (Arg, R)
n = 70 (1.85%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
93 208 145 55 150 301 44 59 96 7 31 51 65 15 70 149
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
38 5 19 28 151 93 11 20 84 75 41 18 94 97 10 37
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
176 186 8 32 78 85 7 7 39 22 87 17 35 16 125 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
88 80 9 12 52 78 6 5 17 40 8 1 1 5 1 86
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
818 1050 1164 757
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
465 1111 704 1509
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
258 1568 1492 471 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​I​g​u​a​n​a​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ i​g​u​a​n​a​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.