Viewing data for Lynx rufus
| Scientific name | Lynx rufus |
| Common name | Bobcat |
| Maximum lifespan | 32.30 years (Lynx rufus@AnAge) |
| Total mtDNA (size: 17056 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6995 | 10061 | 4562 | 2433 | 4536 | 5525 |
| Base content per 1 kb (bases) | 410 | 590 | 267 | 143 | 266 | 324 |
| Base content (%) | 41.0% | 59.0% | ||||
| Total protein-coding genes (size: 11339 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4712 | 6627 | 3228 | 1484 | 3080 | 3547 |
| Base content per 1 kb (bases) | 416 | 584 | 285 | 131 | 272 | 313 |
| Base content (%) | 41.6% | 58.4% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1515 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 565 | 950 | 324 | 241 | 416 | 534 |
| Base content per 1 kb (bases) | 373 | 627 | 214 | 159 | 275 | 352 |
| Base content (%) | 37.3% | 62.7% | ||||
| Total rRNA-coding genes (size: 2533 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1017 | 1516 | 563 | 454 | 594 | 922 |
| Base content per 1 kb (bases) | 402 | 598 | 222 | 179 | 235 | 364 |
| Base content (%) | 40.2% | 59.8% | ||||
| 12S rRNA gene (size: 960 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 399 | 561 | 228 | 171 | 213 | 348 |
| Base content per 1 kb (bases) | 416 | 584 | 238 | 178 | 222 | 363 |
| Base content (%) | 41.6% | 58.4% | ||||
| 16S rRNA gene (size: 1573 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 618 | 955 | 335 | 283 | 381 | 574 |
| Base content per 1 kb (bases) | 393 | 607 | 213 | 180 | 242 | 365 |
| Base content (%) | 39.3% | 60.7% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 276 | 405 | 193 | 83 | 199 | 206 |
| Base content per 1 kb (bases) | 405 | 595 | 283 | 122 | 292 | 302 |
| Base content (%) | 40.5% | 59.5% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 69 | 135 | 54 | 15 | 53 | 82 |
| Base content per 1 kb (bases) | 338 | 662 | 265 | 74 | 260 | 402 |
| Base content (%) | 33.8% | 66.2% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 655 | 890 | 372 | 283 | 478 | 412 |
| Base content per 1 kb (bases) | 424 | 576 | 241 | 183 | 309 | 267 |
| Base content (%) | 42.4% | 57.6% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 277 | 407 | 177 | 100 | 185 | 222 |
| Base content per 1 kb (bases) | 405 | 595 | 259 | 146 | 270 | 325 |
| Base content (%) | 40.5% | 59.5% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 350 | 434 | 229 | 121 | 214 | 220 |
| Base content per 1 kb (bases) | 446 | 554 | 292 | 154 | 273 | 281 |
| Base content (%) | 44.6% | 55.4% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 519 | 621 | 362 | 157 | 295 | 326 |
| Base content per 1 kb (bases) | 455 | 545 | 318 | 138 | 259 | 286 |
| Base content (%) | 45.5% | 54.5% | ||||
| ND1 (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 415 | 541 | 298 | 117 | 238 | 303 |
| Base content per 1 kb (bases) | 434 | 566 | 312 | 122 | 249 | 317 |
| Base content (%) | 43.4% | 56.6% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 408 | 634 | 313 | 95 | 252 | 382 |
| Base content per 1 kb (bases) | 392 | 608 | 300 | 91 | 242 | 367 |
| Base content (%) | 39.2% | 60.8% | ||||
| ND3 (size: 347 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 141 | 206 | 97 | 44 | 99 | 107 |
| Base content per 1 kb (bases) | 406 | 594 | 280 | 127 | 285 | 308 |
| Base content (%) | 40.6% | 59.4% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 561 | 817 | 395 | 166 | 376 | 441 |
| Base content per 1 kb (bases) | 407 | 593 | 287 | 120 | 273 | 320 |
| Base content (%) | 40.7% | 59.3% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 111 | 186 | 73 | 38 | 98 | 88 |
| Base content per 1 kb (bases) | 374 | 626 | 246 | 128 | 330 | 296 |
| Base content (%) | 37.4% | 62.6% | ||||
| ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 757 | 1064 | 537 | 220 | 492 | 572 |
| Base content per 1 kb (bases) | 416 | 584 | 295 | 121 | 270 | 314 |
| Base content (%) | 41.6% | 58.4% | ||||
| ND6 (size: 528 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 196 | 332 | 145 | 51 | 120 | 212 |
| Base content per 1 kb (bases) | 371 | 629 | 275 | 97 | 227 | 402 |
| Base content (%) | 37.1% | 62.9% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%) 
Alanine (Ala, A)
n = 18 (7.96%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 23 (10.18%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.42%) 
Leucine (Leu, L)
n = 43 (19.03%) 
Isoleucine (Ile, I)
n = 26 (11.5%) 
Methionine (Met, M)
n = 11 (4.87%) 
Proline (Pro, P)
n = 13 (5.75%) 
Phenylalanine (Phe, F)
n = 12 (5.31%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 11 (4.87%) 
Glutamine (Gln, Q)
n = 9 (3.98%) 
Histidine (His, H)
n = 8 (3.54%) 
Lysine (Lys, K)
n = 4 (1.77%) 
Arginine (Arg, R)
n = 4 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 10 | 9 | 3 | 4 | 18 | 6 | 9 | 7 | 2 | 2 | 1 | 5 | 2 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 4 | 11 | 3 | 0 | 0 | 2 | 8 | 1 | 5 | 2 | 6 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 5 | 1 | 2 | 2 | 6 | 0 | 1 | 3 | 1 | 1 | 0 | 3 | 5 | 6 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 0 | 0 | 1 | 3 | 1 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 43 | 65 | 79 | 40 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 64 | 39 | 102 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 64 | 88 | 57 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITIMSMIMTLFIVFQLKISKYLYPLNPEPKSTTTPNQLSPWEKKWTKIYSPLSLPQQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 7 (10.45%)
Threonine (Thr, T)
n = 8 (11.94%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.49%)
Leucine (Leu, L)
n = 8 (11.94%)
Isoleucine (Ile, I)
n = 6 (8.96%)
Methionine (Met, M)
n = 4 (5.97%)
Proline (Pro, P)
n = 8 (11.94%)
Phenylalanine (Phe, F)
n = 3 (4.48%)
Tyrosine (Tyr, Y)
n = 3 (4.48%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 6 (8.96%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 5 | 3 | 2 | 0 | 4 | 1 | 1 | 4 | 1 | 0 | 0 | 1 | 0 | 2 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 3 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 3 | 2 | 0 | 1 | 4 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 2 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 4 | 20 | 27 | 17 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 22 | 20 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 12 | 35 | 14 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 40 (7.78%)
Serine (Ser, S)
n = 30 (5.84%)
Threonine (Thr, T)
n = 39 (7.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 37 (7.2%)
Leucine (Leu, L)
n = 61 (11.87%)
Isoleucine (Ile, I)
n = 35 (6.81%)
Methionine (Met, M)
n = 35 (6.81%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.11%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 14 | 19 | 9 | 5 | 20 | 8 | 17 | 4 | 2 | 7 | 8 | 16 | 6 | 21 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 16 | 1 | 0 | 8 | 16 | 16 | 0 | 10 | 10 | 19 | 8 | 9 | 10 | 8 | 1 | 16 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 13 | 3 | 5 | 6 | 16 | 0 | 1 | 2 | 9 | 10 | 5 | 2 | 7 | 9 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 5 | 5 | 12 | 4 | 8 | 1 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 150 | 102 | 137 | 126 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 134 | 95 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 57 | 136 | 180 | 142 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 18 (7.93%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.85%)
Leucine (Leu, L)
n = 34 (14.98%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 11 (4.85%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 6 (2.64%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 12 | 9 | 3 | 5 | 15 | 3 | 6 | 6 | 1 | 3 | 3 | 3 | 2 | 4 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 2 | 4 | 2 | 1 | 0 | 6 | 3 | 0 | 4 | 3 | 6 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 9 | 0 | 5 | 1 | 7 | 1 | 2 | 2 | 6 | 5 | 0 | 2 | 1 | 5 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 12 | 3 | 5 | 5 | 4 | 1 | 0 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 59 | 67 | 48 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 54 | 62 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 20 | 64 | 93 | 51 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 13 (5.0%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 9 | 3 | 4 | 6 | 16 | 2 | 5 | 7 | 0 | 4 | 3 | 7 | 0 | 4 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 2 | 6 | 7 | 2 | 1 | 0 | 6 | 11 | 3 | 2 | 2 | 7 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 11 | 1 | 2 | 7 | 7 | 1 | 1 | 3 | 4 | 9 | 2 | 0 | 2 | 5 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 8 | 0 | 2 | 1 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 67 | 62 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 66 | 57 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 96 | 101 | 47 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 22 (5.8%)
Serine (Ser, S)
n = 25 (6.6%)
Threonine (Thr, T)
n = 25 (6.6%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 17 (4.49%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 42 (11.08%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 25 (6.6%)
Tyrosine (Tyr, Y)
n = 16 (4.22%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 9 (2.37%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 34 | 9 | 3 | 15 | 30 | 5 | 6 | 5 | 1 | 5 | 3 | 9 | 0 | 5 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 3 | 1 | 11 | 9 | 1 | 1 | 11 | 12 | 3 | 4 | 8 | 10 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 9 | 1 | 2 | 9 | 13 | 1 | 0 | 0 | 8 | 8 | 1 | 0 | 3 | 14 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 4 | 2 | 2 | 8 | 7 | 2 | 1 | 1 | 7 | 0 | 1 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 82 | 102 | 108 | 88 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 94 | 76 | 157 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 166 | 142 | 50 | ||||||||||||
| ND1 (size: 956 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 29 (9.15%)
Serine (Ser, S)
n = 18 (5.68%)
Threonine (Thr, T)
n = 25 (7.89%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 15 (4.73%)
Leucine (Leu, L)
n = 55 (17.35%)
Isoleucine (Ile, I)
n = 28 (8.83%)
Methionine (Met, M)
n = 20 (6.31%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 19 (5.99%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 15 | 15 | 3 | 11 | 36 | 3 | 2 | 6 | 0 | 1 | 3 | 8 | 3 | 3 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 1 | 18 | 10 | 0 | 0 | 3 | 8 | 1 | 2 | 10 | 10 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 14 | 0 | 0 | 6 | 10 | 0 | 0 | 2 | 7 | 6 | 0 | 0 | 5 | 8 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 9 | 2 | 0 | 3 | 7 | 0 | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 93 | 95 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 32 | 92 | 57 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 113 | 150 | 40 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 18 (5.2%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 38 (10.98%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.47%)
Leucine (Leu, L)
n = 50 (14.45%)
Isoleucine (Ile, I)
n = 38 (10.98%)
Methionine (Met, M)
n = 40 (11.56%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 11 (3.18%)
Tyrosine (Tyr, Y)
n = 9 (2.6%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 15 (4.34%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 28 | 37 | 4 | 10 | 27 | 5 | 4 | 9 | 0 | 2 | 3 | 7 | 0 | 2 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 0 | 10 | 8 | 0 | 1 | 7 | 6 | 1 | 5 | 10 | 7 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 18 | 1 | 0 | 9 | 16 | 1 | 0 | 0 | 2 | 7 | 0 | 0 | 2 | 14 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 6 | 0 | 1 | 1 | 15 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 86 | 147 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 104 | 62 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 123 | 173 | 39 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 18 (5.2%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 38 (10.98%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 12 (3.47%)
Leucine (Leu, L)
n = 50 (14.45%)
Isoleucine (Ile, I)
n = 38 (10.98%)
Methionine (Met, M)
n = 40 (11.56%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 11 (3.18%)
Tyrosine (Tyr, Y)
n = 9 (2.6%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 15 (4.34%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 28 | 37 | 4 | 10 | 27 | 5 | 4 | 9 | 0 | 2 | 3 | 7 | 0 | 2 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 0 | 10 | 8 | 0 | 1 | 7 | 6 | 1 | 5 | 10 | 7 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 18 | 1 | 0 | 9 | 16 | 1 | 0 | 0 | 2 | 7 | 0 | 0 | 2 | 14 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 6 | 0 | 1 | 1 | 15 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 53 | 86 | 147 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 104 | 62 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 123 | 173 | 39 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 34 (7.42%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 37 (8.08%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 17 (3.71%)
Leucine (Leu, L)
n = 92 (20.09%)
Isoleucine (Ile, I)
n = 44 (9.61%)
Methionine (Met, M)
n = 33 (7.21%)
Proline (Pro, P)
n = 21 (4.59%)
Phenylalanine (Phe, F)
n = 16 (3.49%)
Tyrosine (Tyr, Y)
n = 18 (3.93%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 22 (4.8%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 9 (1.97%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 21 | 25 | 5 | 21 | 42 | 8 | 15 | 7 | 4 | 3 | 2 | 11 | 1 | 7 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 2 | 1 | 3 | 19 | 12 | 0 | 3 | 6 | 6 | 3 | 6 | 10 | 4 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 23 | 1 | 4 | 7 | 15 | 1 | 3 | 7 | 5 | 13 | 1 | 1 | 8 | 14 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 6 | 2 | 1 | 2 | 12 | 1 | 1 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 80 | 127 | 159 | 93 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 119 | 84 | 202 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 149 | 198 | 80 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 4 (4.08%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 12 (12.24%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 2 | 9 | 1 | 2 | 13 | 1 | 3 | 2 | 0 | 2 | 0 | 5 | 0 | 3 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 3 | 2 | 4 | 3 | 0 | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 2 | 0 | 4 | 3 | 1 | 0 | 0 | 1 | 2 | 2 | 0 | 1 | 2 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 23 | 23 | 28 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 22 | 18 | 50 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 28 | 42 | 23 | ||||||||||||
| ND5 (size: 1821 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 29 (4.79%)
Alanine (Ala, A)
n = 41 (6.77%)
Serine (Ser, S)
n = 47 (7.76%)
Threonine (Thr, T)
n = 51 (8.42%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 21 (3.47%)
Leucine (Leu, L)
n = 93 (15.35%)
Isoleucine (Ile, I)
n = 57 (9.41%)
Methionine (Met, M)
n = 36 (5.94%)
Proline (Pro, P)
n = 25 (4.13%)
Phenylalanine (Phe, F)
n = 45 (7.43%)
Tyrosine (Tyr, Y)
n = 23 (3.8%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 12 (1.98%)
Asparagine (Asn, N)
n = 33 (5.45%)
Glutamine (Gln, Q)
n = 20 (3.3%)
Histidine (His, H)
n = 13 (2.15%)
Lysine (Lys, K)
n = 25 (4.13%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 19 | 38 | 32 | 10 | 21 | 37 | 12 | 10 | 18 | 2 | 0 | 10 | 10 | 1 | 14 | 31 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 2 | 2 | 5 | 21 | 14 | 1 | 3 | 9 | 14 | 3 | 4 | 8 | 13 | 0 | 15 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 15 | 1 | 5 | 12 | 17 | 2 | 2 | 9 | 9 | 14 | 1 | 3 | 11 | 22 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 5 | 4 | 6 | 19 | 6 | 1 | 3 | 4 | 1 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 113 | 147 | 213 | 134 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 65 | 153 | 137 | 252 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 42 | 237 | 222 | 106 | ||||||||||||
| ND6 (size: 528 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.29%)
Alanine (Ala, A)
n = 11 (6.29%)
Serine (Ser, S)
n = 11 (6.29%)
Threonine (Thr, T)
n = 12 (6.86%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 19 (10.86%)
Leucine (Leu, L)
n = 19 (10.86%)
Isoleucine (Ile, I)
n = 16 (9.14%)
Methionine (Met, M)
n = 8 (4.57%)
Proline (Pro, P)
n = 4 (2.29%)
Phenylalanine (Phe, F)
n = 13 (7.43%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 4 (2.29%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 4 (2.29%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 4 (2.29%)
Arginine (Arg, R)
n = 1 (0.57%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 1 | 4 | 2 | 0 | 1 | 1 | 8 | 0 | 0 | 4 | 1 | 8 | 6 | 13 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 2 | 0 | 5 | 1 | 1 | 4 | 14 | 0 | 6 | 5 | 3 | 1 | 0 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 4 | 2 | 3 | 1 | 2 | 1 | 2 | 2 | 8 | 1 | 3 | 7 | 4 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 6 | 4 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 9 | 48 | 51 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 34 | 31 | 75 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 41 | 8 | 41 | 86 | ||||||||||||
| Total protein-coding genes (size: 11407 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 220 (5.79%)
Alanine (Ala, A)
n = 259 (6.82%)
Serine (Ser, S)
n = 271 (7.13%)
Threonine (Thr, T)
n = 309 (8.13%)
Cysteine (Cys, C)
n = 24 (0.63%)
Valine (Val, V)
n = 185 (4.87%)
Leucine (Leu, L)
n = 596 (15.69%)
Isoleucine (Ile, I)
n = 338 (8.9%)
Methionine (Met, M)
n = 244 (6.42%)
Proline (Pro, P)
n = 196 (5.16%)
Phenylalanine (Phe, F)
n = 227 (5.98%)
Tyrosine (Tyr, Y)
n = 143 (3.76%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 66 (1.74%)
Glutamic acid (Glu, E)
n = 98 (2.58%)
Asparagine (Asn, N)
n = 157 (4.13%)
Glutamine (Gln, Q)
n = 91 (2.4%)
Histidine (His, H)
n = 94 (2.47%)
Lysine (Lys, K)
n = 104 (2.74%)
Arginine (Arg, R)
n = 66 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 145 | 193 | 179 | 54 | 104 | 272 | 56 | 90 | 78 | 13 | 33 | 37 | 94 | 21 | 87 | 140 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 65 | 8 | 16 | 41 | 125 | 85 | 8 | 34 | 61 | 97 | 28 | 48 | 71 | 74 | 3 | 71 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 96 | 128 | 14 | 32 | 67 | 117 | 9 | 13 | 33 | 64 | 79 | 13 | 20 | 53 | 104 | 33 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 61 | 71 | 27 | 34 | 32 | 90 | 14 | 6 | 10 | 46 | 4 | 1 | 0 | 7 | 0 | 91 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 828 | 933 | 1199 | 840 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 461 | 989 | 760 | 1590 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 295 | 1229 | 1520 | 756 | ||||||||||||
>NC_014456.1 Lynx rufus mitochondrion, complete genome GGACTAGTGACTAATCAGCCCATGATCACACATAACTGTGGTGTCATGCATTTGGTATCTTTTAATTTTA GGGGGTCGAACTTGCTATGATTCAGCTATGACCTAAAGGTCCTGACTCAGTCAAATATATTGTAGCTGGG CTTATTCTCTATGCGGGGTCTCCACACGGGCAGACAGTCAAGGTGCTATTCAGTCAATGGTCACAGGACA TATACTCAAATTCCTAAGGTCTCACAGGACACGGCATGCGCGCACCCACGTATACGCGTACACGTACACA CGTACACACGTACACGTACACACGTACACGTACACACGTACACGTACACACGTACACGTACACACGTACA CGTACACACGTACACGTACACACGTACACACGTACACGTATACGCGTACACGTACACACGTACACACGTA CACGTATACGCGTACACGTACACACGTACACACGTACACGTATACGCGTACACGTACACACGTACACACG TACACACGTACACACGTACACACGTACACACGTACACACGTACACACGTACACACGTACACGTATACACG TATACACGTATACACGTATACACGTATACACATGCAAACACTTTGATTTAGTATACAACTAGCTTAATCA AACCCCCCTTACCCCCCGTTAACCTTATTTATAATAATACGTGCCTATTTGTGTCTTGCCAAACCCCAAA AACAAGACTAGACCGTACCTAAACATAAGGCCTATGAATAACGTTTATAAGCTTTACCAATCCCCTATCA CTACTAGCTATTAGTACTAAATCATAACTCTGTTCGCAGCTATCTATAGATACGCCAACCCGATCTCTAA TTCGTCCCTATCGAACAACATCTTATTTATCCAAATTAACCCCGCGCCCCAGTTAATGTAGCTTAAACAC ATAAAGCAAGGCACTGAAAATGCCTAGATGAGTCATCAGACTCCATAAACACAAAGGTTTGGTCCTGGCC TTTCCATTAGTTATTAATAAGATTACACATGCAAGCCTCCGCATCCCGGTGAAAATGCCCTCTAGGTCAC CCAGTGACCTAAAGGAGCTGGTATCAAGCGCACAACCATAGTAGCTCATAACACCTTGCTCAGCCACACC CCCACGGGACACAGCAGTGATAAAAATTAAGCTATGAATGAAAGTTTGACTAAGCTATATTAAACAAGGG TTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAATAGACCCACGGCGTAAAGCG TGTTATAGAGAAAAAACAATACTAAAGTTAAACCTTAACTAGGCCGTAAAAAGCTACAGTTAACATAAAA ATACAGCACGAAAGTAACTTTAATATCTCCGATCACACGATAGCTAAGACCCAAACTGGGATTAGATACC CCACTATGCTTAGCCCTAAACCTAGATAGTTAACTCAAACAAAACTATCCGCCAGAGAACTACTAGCAAC AGCTTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCTAGAGGAGCCTGTTCTATAATCGATAAAC CCCGATATACCTCACCATCTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAACCCTAAAAAGGA ATAAAAGTAAGCACAAGTATCTTAACACAAAAAAGTTAGGTCAAGGTGTAGCCCATGAGATGGGAAGTAA TGGGCTACATTTTCTAAAACTAGAACACCCACGAAAATCCTTATGAAACTAAGTATTAAAGGAGGATTTA GTAGTAAATTTGAGAATAGAGAGCTCAATTGAATCGGGCCATGAAGCACGCACACACCGCCCGTCACCCT CCTCAAGTGATAGTATCCAAAAAAACCTATTTAACCTACCACACCCACAAGAGGAGACAAGTCGTAACAA GGTAAGCATACTGGAAAGTGTGCTTGGATAACAAGATGTAGCTTAAACAAAGCATCTGGCTTACACCCAG AAGATTTCACATCAAACTGACCATCTTGAGCCAAAACTAGCCCAAACACCCATAAACCCAACTAACACTA GAAAATAAAATAAAACATTTAGTTACTTCAAAAAGTATAGGAGATAGAAATTTAACTTGGCGCTATAGAG AAAGTACCGTAAGGGAAAGATGAAAGATAAAATTAAAAGCACCACACAGCAAAGATTACCCCTTGTACCT TTTGCATAATGAGTTAGCTAGAATAGCCTAACAAAGAGAACTTCAGCTAGGTCCCCCGAAACCAGACGAG CTACCCATGAACAATCTATTACAGGATGAACTCGTCTATGTTGCAAAATAGTGAGAAGATTTGTGGGTAG AGGTGAAAAGCCTAACGAGCCTGGTGATAGCTGGTTGCCCAGAATAGAATCTTAGTTCAACTTTAAACTT ACCTCAAAAACCCATAATTCTAATGTAAGTTTAAAATATAGTCTAAAAAGGTACAGCTTTTTAGAATTAG GATACAGCCTTTATTAGAGAGTAAGCATAATTGTAAACCATAGTTGGCCTAAGAGCAGCCATCAATTAAG AAAGCGTTCAAGCTCAACAATCAAAACATCTTAATGTCAAAAAATGCAACTAACTCCTAATTTAAAACTG GGCTAATCTATTTAATAATAGAAGCAATAATGCTAATATGAGCAACAAGAAATATTTCTCCCTGCATAAG TTTATATCAGAACGGATAACCACTGATAGTTAACAACAAGATATGTACAGCCTAACCATAAACACAATAT CAAACTAATTGTTAACCCAACACAGGCATGCAAATTTAGGGAAAGATTAAAAGAAGTAAAAGGAACTCGG CAAACACAAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTTCTAGTATTAGAGGCACTGCCTGC CCAGTGACACTAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAATCATTTGTTCCTTAAA TAGGGACTTGTATGAACGGCCACACGAGGGCTTTACTGTCTCTTACTTCCAATCCGTGAAATTGACCTTC CCGTGAAGAGGCGGGAATATAACAATAAGACGAGAAGACCCTATGGAGCTTTAATTAACCGACCCAAAGA GACCTCATTTATCCAACCGACAGGAACAACAAACCTCTATATGGGCCGACAATTTAGGTTGGGGTGACCT CGGAGAACAAAACAACCTCCGAGTGATTTAAATCAAGACTAACCAGTCAAAAGTACTACATCACTTATTG ATCCAAAAACTTGATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTTCAGAGTCCATAT CGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCAGCTATCAAAGGTTCG TTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCTAT TAAACAATTTCTCCCAGTACGAAAGGACAAGAGAAATGAGGCCCACTTTACCAAAGCGCCTTTAACCTAA TAGATGATATAATCTTAATCTAGACAGTTTACCCAATTTCACCTGCCCGAGAGCTCGGGTTTGTTAGGGT GGCAGAGCCCGGTAACTGCATAAAACTTAAGCTTTTATAATCAGAGGTTCAACTCCTCTCCCTAACAACA TGTTCATAATCAACATCCTCTCACTAATTATCCCCATTCTCCTCGCCGTAGCCTTCCTAACCTTAGTCGA ACGAAAAGTGCTAGGCTACATGCAACTCCGTAAAGGACCAAATGTCGTAGGACCATATGGCCTACTTCAA CCCATCGCAGACGCCGTAAAACTATTTACTAAAGAGCCCCTACGGCCCCTCACATCCTCCATACTCATAT TCATTATAGCACCAATTCTAGCCCTCACACTGGCCCTAACCATGTGAATCCCACTACCCATACCATATCC ACTCATTAACATAAACCTAGGAGTACTATTCATACTAGCTATATCAAGCCTGGCCGTTTACTCCATTCTA TGATCAGGATGAGCCTCAAACTCAAAATATGCCCTAATTGGAGCCCTACGAGCCGTGGCCCAAACAATCT CATATGAAGTCACACTAGCCATTATCCTCCTATCAGTGCTACTAATAAATGGGTCCTTCACACTAGCCAC ACTAATTACCACCCAAGAATACATATGACTAATTATTCCCGCATGACCCCTAGCCATAATATGATTCATC TCAACACTAGCAGAGACCAACCGAGCCCCATTCGACCTAACAGAAGGAGAATCAGAACTAGTATCCGGAT TCAATGTAGAATATGCAGCAGGCCCCTTCGCCCTATTCTTCCTAGCAGAATATGCCAACATCATCATAAT AAATATCCTCACAACAATCCTATTCTTCGGAGCATACCACAACCCCTATATGCCAGAACTTCATACTATT AACTTTACAGTAAAAACCCTATTTTTAACAACCACTTTCCTATGAATCCGAGCATCCTACCCACGATTCC GATACGACCAACTAATGCACCTCCTATGAAAAAATTTCCTACCCCTTACCCTAGCCCTATGCATATGACA CGTATCACTGCCTATCATTACAGCAAGCATCCCACCTCAAACATAAGAAATATGTCTGATAAAAGAGTTA CTTTGATAGAGTAAAACATAGAGGTTTAAACCCTCTTATTTCTAGAATTATAGGAGTCGAACCTAATCCT AAGAATCCAAAAATCTTCGTGCTACCATTATTACACCACATTCTAAAGTAAGGTCAGCTAAATAAGCTAT CGGGCCCATACCCCGAAAATGTTGGTTTATACCCTTCCCATACTAATCAAACCCCCTATTTTCATCATCA TTATATCAACCGTTATCTCAGGAACTATAATTGTAGTATCAACCTCCCATTGACTTATAGTCTGAATCGG CTTTGAAATAAACCTGCTAGCCATTACTCCCATCCTCATAAAAAAATACAACCCACGGGCCATAGAAGCA GCCACAAAATATTTCCTAACGCAAGCAACCGCCTCCATAATCCTAATAATAGGAATCATTATCAACCTAC TACACTCGGGACAATGAACCGTATCAAAAGACCTCAACCCCATAGCATCAATCATAATAACAACCGCCCT AGCAATAAAACTAGGACTAGCCCCCTTTCACTTCTGAGTACCTGAAGTCACACAAGGAGTCCCCATATCA TCAGGCCTGATCTTACTAACATGACAAAAAATCGCACCACTATCCATCCTCTACCAAATTTCACCCACTA TCAACCCTAACCTCCTCCTAACAATATCCATCATGTCAGTTATAATCGGGGGTTGAGGAGGCCTTAACCA AACACAACTACGAAAAATCATGGCATACTCCTCAATCGCCCATATAGGCTGAATAACAGCCATCATAATA TACAACCCCACAGTAATAATCCTAAACCTAACTATCTATATTATTATAACACTAACCACCTTCATGCTAT TCATACATAACTCCACCACAACAACATCAGCCTTATCACAATCATGAAACAAAACTCCCCTGATTACCTC ACTTATTCTAGTACTAATAATATCCCTAGGCGGCCTCCCTCCACTCTCCGGCTTCATCCCAAAATGAATA ATCATCCAAGAACTAACTAAAAATGAAATAATCATAATACCAACACTACTAGCCATAACAGCACTACTCA ACCTATACTTCTACATACGACTAACATACACCACCGCACTGACCATATTCCCCTCAAACAATAACATAAA AATAAAATGACGATTCGAATGCACAAAAAAAACAATCCTCTTACCCCCTTTAATCGTAATATCAACTATA CTACTTCCACTCACACCAATACTATCCATCCTGGATTAGAAGTTTAGGTTAGACTAGACCAAGAGCCTTC AAAGCTCTAAGCAAGCCTCACAGACTTAACTTCTGCATGCCCAAGCCACCTTAAGGACTGCGAGAACTCA TCTCACATCAATTGACTGCAAATCAAACACTTTAATTAAGCTAAGTCCTCACTAGATTGGTGGGCTCCAA CCCCACGAAATTTTAGTTAACAGCTAAATACCCTAAACAACTGGCTTCAATCCACTTCTCCCGCCGTCTG GAAAAAAAAGGCGGGAGAAGCCCCGGCAGCGTCAAGCTGCTTCTTTGAATTTGCAATTCAATATGACACT CACTGCAGGACTTGGTAAAAAGAGGGCTCGAACCTCTGTGTTTAGATTTACAGTCTAATGCCTACTCAGC CATTTTACCTATGTTCATAAACCGCTGACTATTTTCAACTAATCACAAAGATATCGGTACTCTTTATCTT CTATTCGGTGCCTGGGCCGGTATGGTGGGGACTGCCCTCAGTCTCCTAATCCGAGCCGAACTGGGTCAAC CTGGCACACTACTGGGAGATGATCAGATTTACAATGTAATCGTCACCGCCCACGCTTTTGTAATAATTTT CTTCATAGTAATGCCCATTATAATTGGAGGGTTCGGGAACTGACTGGTCCCATTAATAATTGGAGCCCCT GATATGGCATTCCCCCGAATGAATAACATGAGCTTCTGACTTCTTCCCCCATCTTTTCTACTTCTACTTG CTTCATCCATGGTGGAGGCCGGAGCAGGAACTGGGTGAACAGTATATCCACCCCTAGCCGGTAACCTGGC ACATGCAGGAGCATCCGTAGACCTAACTATTTTCTCACTCCACCTGGCAGGTGTTTCCTCAATCCTAGGT GCTATTAATTTTATTACCACTATTATTAATATAAAACCCCCTGCCATATCTCAATATCAAACACCCTTAT TTGTATGATCAGTTTTAATTACTGCAGTCTTATTACTCTTGTCACTCCCAGTTCTAGCAGCAGGAATCAC CATGCTACTAACAGATCGAAACTTAAACACTACATTCTTTGACCCTGCTGGAGGAGGAGATCCTATTTTA TATCAACACTTATTCTGATTCTTTGGTCACCCAGAGGTCTACATCCTAATTTTACCTGGCTTTGGAATGA TCTCACACATTGTTACCTATTACTCAGGTAAAAAAGAGCCCTTTGGCTACATGGGAATAGTTTGAGCCAT AATATCAATCGGCTTCTTGGGCTTTATCGTATGAGCCCATCACATATTTACTGTAGGGATGGATGTAGAC ACACGAGCATACTTTACATCAGCCACCATAATCATTGCTATTCCTACTGGGGTGAAAGTGTTTAGCTGAC TAGCTACTCTTCATGGAGGCAATATCAAATGGTCTCCCGCCATACTATGGGCCCTGGGATTTATTTTTCT ATTCACCGTAGGGGGCTTAACGGGAATTGTATTAGCAAACTCCTCATTAGATATTGTTCTTCACGATACA TATTACGTAGTAGCCCACTTCCACTACGTCCTGTCAATAGGAGCAGTATTCGCTATCATGGGAGGCTTTG TCCACTGGTTCCCCCTATTCTCAGGGTATACTCTGGATGATACTTGGGCAAAAATCCACTTCACAATTAT ATTTATGGGTGTCAACATGACGTTCTTTCCTCAGCATTTCCTAGGCCTATCAGGAATGCCGCGACGTTAT TCTGACTACCCAGATGCATACACAACTTGAAACACAATTTCCTCAATAGGCTCTTTTATCTCATTAACGG CAGTTATATTAATGGTCTTCATAGTGTGAGAAGCTTTTGCATCCAAGCGAGAAGTGGCCATAGTAGAATT AACCACAACTAATCTTGAGTGATTACATGGATGTCCCCCTCCATACCACACATTTGAAGAGCCAACTTAT GTACTATTAAAATAAGAAAGGAAGGAGTCGAACCCTCTTAAACTGGTTTCAAGCCAATGCCATAACCACT ATGTCTTTCTCAATTAAGAAGTATTAGTAAAACAATTACATAACTTTGTCGAAGTTAAATTATAGGCTTG AATCCTATATACTTCCATGGCGTACCCCTTTCAACTAGGCTTTCAAGATGCCACATCTCCTATCATAGAG GAACTCCTACACTTCCATGACCATACATTAATGATTGTATTCCTAATTAGCTCACTAGTCCTCTATATTA TCTCATTAATGCTAACAACCAAGCTTACACATACAAGTACAATAGATGCTCAAGAAGTAGAGACCATCTG AACTATTCTGCCTGCCATCATCCTAATTCTTATCGCCCTACCCTCCCTGCGAATCCTCTATATAATAGAT GAAATTAACAACCCATCTCTCACAGTAAAAACCATGGGACACCAGTGATACTGAAGTTACGAATATACCG ACTATGAAGACTTGAATTTTGACTCTTACATAATCCCTACCCAAGAATTAAAACCAGGAGAACTTCGACT ACTAGAAGTTGACAACCGAGTGGTTTTACCAATAGAAATAACTATCCGCATGCTAATCTCGTCAGAGGAT GTGTTACATTCATGAGCCGTTCCATCACTAGGCCTAAAAACTGATGCTATCCCAGGCCGACTAAACCAAA CAACTCTGATGGGCACACGACCTGGATTATATTATGGCCAATGCTCAGAAATCTGCGGCTCAAACCATAG CTTCATACCCATTGTCCTCGAACTAGTCCCATTGGCATACTTTGAAAAATGATCTGCATCTATACTATAA ATTCATTGAGAAGCTAAATAAGCGTTAACCTTTTAAGTTAAAGACTGGGAGCTCGGACCTCCCCTTAATG ATATGCCACAGCTGGATACATCAACCTGATTTATCACTATCATATCAATAATCATAACACTATTCATTGT ATTTCAACTAAAAATCTCAAAATACCTATATCCGTTAAATCCAGAACCTAAATCCACAACCACGCCAAAT CAACTTAGTCCCTGAGAAAAAAAATGAACGAAAATCTATTCGCCTCTTTCACTACCCCAACAATAATAGG ACTGCCTATTGTTATTCTGATCATTATATTTCCAAGCATTCTATTCCCATCACCCAATCGACTAATTAAT AACCGCCTAATCTCACTACAACAATGACTAGTACAATTAACATCAAAACAAATACTAGCCATTCATAATC ACAAAGGACAAACCTGAGCCCTAATACTAATATCCCTCATCTTATTTATCGGATCAACGAACTTACTAGG CTTGTTGCCTCACTCATTCACTCCAACCACCCAGTTGTCAATAAACTTAGGAATAGCCATTCCACTATGA GCTGGCACTGTAATTACTGGATTTCGCCATAAGACTAAAGCATCTCTGGCCCACTTTTTACCACAGGGAA CACCTATTCCCCTAATTCCTATGCTTGTAATCATCGAAACTATTAGTCTCTTTATTCAACCTGTGGCCTT AGCCGTACGACTTACAGCTAACATCACTGCAGGGCATCTACTAATACACCTGATTGGAGGAGCCACCCTA GCCCTGGCAAACATCAGCACCTCCGTTGCCTTAATTACTTTTACCATTCTCATCCTCCTAACAATCCTTG AATTCGCTGTGGCTTTAATTCAAGCCTACGTCTTCACCCTACTAGTAAGCCTGTATTTACATGACAATAC CTAATGACCCACCAAACTCATGCGTACCACATAGTCAACCCTAGCCCATGACCACTCACGGGGGCCCTTT CAGCCCTCCTAATGACATCAGGCCTGGCTATATGATTCCACTACAACTCAACACTATTACTAGCTCTTGG AATGACTACCAACCTATTAACCATGTACCAATGATGACGAGATATTATTCGAGAAAGTACATTCCAAGGC CACCATACATCCATCGTTCAAAAAGGCCTTCGATATGGAATAATCCTCTTCATCGTCTCAGAAGTATTCT TCTTCGCAGGCTTCTTCTGGGCCTTTTACCACTCAAGCCTAGCCCCAACCCCTGAACTAGGAGGATGCTG ACCACCAACAGGCATTATCCCCCTAAACCCCCTAGAAGTCCCACTATTAAATACTTCCGTACTTCTGGCC TCTGGAGTATCAATCACCTGGGCTCACCATAGCTTAATGGAAGGAAACCGAAAACATATGCTCCAAGCAC TATTCATTACAATCTCCCTAGGGATCTACTTCACACTCCTCCAAGCCTCCGAATATTACGAAACACCATT TACAATCTCGGACGGAGTTTACGGGTCCACCTTCTTCATGGCTACAGGATTCCACGGACTACATGTAATT ATTGGCTCCACTTTCCTAATCGTATGCTTCTTACGCCAACTAAAATATCACTTTACATCAAATCACCACT TTGGATTCGAAGCCGCTGCTTGATACTGACACTTCGTAGATGTAGTTTGACTATTCCTATACGTTTCCAT TTATTGATGAGGATCTTATTCCTTTAGTATTAACAAGTACAGTTGACTTCCAATCAACCAGTTTCGGATA AGGCCCGAAAAGGAATAATAAACGTAATACTTGCTCTACTCACCAACACACTTCTATCCGCACTACTCGT ACTCATCGCATTCTGATTACCCCAACTAAATATCTATGCAGAAAAAGTAAGCCCTTACGAGTGCGGATTT GATCCTATAGGATCCGCCCGGTTACCCTTTTCCATGAAATTCTTCCTAGTAGCTATCACATTCTTGTTAT TTGATCTAGAAATTGCACTACTACTCCCCCTTCCCTGAGCCTCACAAACGAACAAACTATCAACCATACT TATTATAGCTCTTCTACTGATCTCATTACTAGCTGCAAGCCTAGCCTACGAATGAACCCAAAAAGGACTA GAATGAACTGAATATGATAATTAGTTTAAACTAAAATAAATGATTTCGACTCATTAGATTATAGCTTACC CTATAATTATCAAATGTCTATAGTTTATATTAACATCTTTCTAGCTTTTGCCATGTCACTCATAGGATTA TTAATATACCGATCCCACCTGATATCTTCCCTTCTATGCCTAGAAGGCATAATATTGTCTCTATTTGTTA TAATGACCGTAGCAATCCTAAATAATCATTTCACACTAGCCAGCATAGCCCCCATTATTCTACTAGTATT CGCTGCCTGCGAGGCAGCACTAGGTCTATCCTTACTAGTAATAGTATCTAACACATACGGTACTGACTAT GTACAAAACCTAAACCTCCTACAATGCTAAAAATCATTATTCCCACCGCCATACTCATACCAACAACATG ACTATCAAAACCTAATATAATTTGAATCAACTCAACAGCCTACAGCCTATTAATTAGTCTCATTAGTCTC TCCTACCTAAATCAATTGGGCGACAATAGCCTAAACTTCTCACTGCTATTTTTTTCAGACTCCCTCTCTG CACCTCTACTAGTACTGACAACATGACTTCTACCACTAATACTTATAGCCAGCCAGTCGCATCTGTCAAA AGAAACTTTAGTTCGAAAAAAATTATATATCACAATACTTATCCTCCTACAACTCCTCCTGATCATGACA TTCACTGCCACAGAGCTAATTATATTTTATATCCTATTCGAAGCCACATTAATCCCTACCTTAATTATCA TTACCCGATGAGGCAACCAGACAGAACGACTAAATGCCGGCCTATACTTTTTATTTTACACCCTAGTAGG CTCATTACCTCTCCTAGTCGCACTACTATATATCCAAAACACGATAGGAACCTTAAATTTCCTAATTATC CAATACTGGGCTAAACCTATCTCAATCACCTGATCCAACATTTTCCTCTGATTAGCATGTATGATGGCAT TCATAGTAAAAATACCCCTATACGGACTCCATCTCTGACTGCCAAAAGCACACGTCGAAGCCCCTATCGC CGGTTCAATAGTTCTTGCCGCCGTGTTATTAAAACTAGGGGGGTACGGAATAATGCGCATCACAATTCTG CTAAACCCCGCAACAAACCAAATAGCATACCCCTTCATAATACTATCATTATGAGGAATAGTTATAACAA GCTCTATTTGTCTACGTCAAACAGATCTAAAATCCTTAATCGCATACTCATCTGTAAGCCACATGGCCCT AGTAATTGTAGCAGTACTAATTCAGACACCCTGAAGCTATATAGGAGCCACAGCCCTGATAATTGCTCAC GGACTAACTTCATCCATACTATTTTGCCTCGCAAACTCAAACTACGAACGAGTACATAGCCGAACAATAA TTCTAGCACGAGGCCTGCAGACCATTCTCCCCCTAATAGCTGCCTGATGACTACTAGCCAGTCTCGCAAA CCTAGCCCTACCGCCCACAATCAATTTAATCGGGGAGCTATTCGTAGTAATGGCCTCCTTCTCATGATCC AACATAACCATTATCCTCATGGGTACAAACATCATCATCACAGCCTTATATTCTCTCTACATACTCATTA CAACCCAACGAGGTAAGTACACACACCACATTAAAAATATTAACCCATCATTTACACGAGAAAACGCCCT AATAACCCTCCACCTACTCCCCCTTCTCCTCCTATCACTAAATCCCAAAATTGTACTAGGCCCCATTTAC TGTAAATATAGTTTAACAAAAACATTAGATTGTGAATCTAATGATAGAAGTGTAAACCTTCTTATTTACC GAAAAAGTATGCAAGAACTGCTAATTCATGCCTCCACGCATAAAAACGTGGCTTTTTCAACTTTTATAGG ATAGAAGTAATCCATTGGCCTTAGGAGCCAAAAAATTGGTGCAACTCCAAATAAAAGTAATAAACTTATT CACCTCATTTATTCTAACTGCAATATTTATCCTACTTCTACCTATCATTATATCTAACACCCAACTATAC AAAAACAGCCTGTATCCTCACTATGTAAAAACTACTATCTCCTATGCCTTCACCATCAGCATAATCCCAA CTATAATATTTATCTCTTCAGGGCAGGAAGCAGTCATCTCAAACTGACACTGATTGTCAATCCAAACCCT CAAGCTGTCACTGAGCTTCAAGATAGACTACTTCTCAATCGTCTTCATCCCCGTAGCACTTTTCGTCACA TGATCAATCATAGAGTTCTCAATATGATACATATACTCAGACCCATACATTAATCGATTCTTCAAGTATC TCCTTATATTCCTAATTACTATAATAATCTTAGTCACCGCTAACAACCTATTCCAACTGTTCATTGGCTG AGAAGGAGTAGGAATCATATCCTTCCTACTCATTGGGTGATGATATGGCCGAACAGATGCAAACACTGCT GCCCTACAAGCAATCCTTTACAACCGCATTGGAGATGTAGGCTTTATCATAGCCATAGCATGATTCCTCA CCAACCTAAACGCATGGGATTTTCAACAAATCTTTATCACCCAACATGAAAATCTAAATGTCCCCTTACT AGGACTTCTACTAGCAGCCACAGGTAAATCCGCCCAATTCGGCCTACACCCATGACTGCCATCAGCCATA GAAGGCCCAACTCCCGTCTCCGCCCTACTCCACTCAAGTACAATAGTCGTAGCCGGAGTCTTCTTACTAA TCCGCTTCCACCCCCTCATAGAACAAAACAAAACCATACAAACCCTCACCCTATGTCTAGGGGCTATTAC AACCCTATTCACAGCCATCTGTGCTCTCACACAAAATGACATCAAGAAAATTGTCGCCTTCTCAACCTCA AGCCAACTGGGCCTAATAATCGTAACCATCGGAATCAACCAACCTTACCTCGCATTCCTACATATCTGCA CACACGCATTCTTCAAAGCCATGCTATTTATATGCTCAGGATCAATCATCCACAGCCTAAATGACGAGCA AGATATTCGAAAGATAGGCGGACTGTACAAACCAATACCCTTTACCACCACCTCCCTCATTATTGGAAGC CTCGCATTAACAGGTATGCCTTTCCTAACAGGTTTCTACTCCAAAGACCTAATCATTGAGACAGCCAACA CGTCGTATACCAACGCCTGAGCCCTACTAATTACTCTCATTGCCACATCCCTTACAGCTGCCTATAGTAC TCGAATCCTGTTCTTTGTACTCCTGGGACAACCACGGTTCAACGCCTTGAACCTAATCAATGAAAATAAT GCCCACCTCATCAATTCCATTAAACGTCTCTTAATCGGAAGCATCTTTGCAGGATACCTAATTTCTTACA ACATCCCCCCAACAACCATCCCACAAATAACTATACCCCACTACCTGAAACTAACTGCCCTCGCCGTGAC TATCACAGGCTTTATCTTGGCATTAGAACTCAACCTCGCGGCCAAAAACTTAAAATTTAAATACCCCTCA AACCTTTTTAAGTTCTCCAACCTCCTGGGATATTTTCCAATCGTAATACACCGCCTCCCACCAAAAATGA GCCTAACTATAAGCCAAAAATCCGCATCGATACTACTAGACATAATTTGACTAGAGAACGTATTACCAAA ATCCGTCTCCTATTTCCAAATAAAAATGTCAACTACTGTATCTAATCAGAAAGGACTAATTAAACTCTAC TTCTTATCTTTCATAATCACCCTGACCCTTGGCCTACTTCTACTTAATTTCCACGAGTAACTTCTATAAT TACCAACACACCAATAAGCAAGGACCATCCAGTGACAACCACCAATCAAGTTCCATAGCTATATAACGCT GCAATTCCCATGGCCTCTTCACTAAAAAAACCTGAATCACCTGTATCATAAATTACCCAATCACCCGCAC CATTAAACTTAAACACAACCTCGATCTCATCTTCTTTTAAAATATAACAAGCAGTTAATAACTCCGCTAG AATCCCTGTAATTAATATCCCCAGTACAGCTTTATTAGACGTCCACGCCTCAGGATAAGGCTCAGTAGCC ATAGCCGTAGTATATCCAAACACCACAAGTATACCTCCCAAATAAATTAAAAAAACCATTAAACCCAAAA ACGACCCCCCAAAATTCAATACAATACCACAACCAATACCACCAGCCACAATCAAACCAAACCCACCATA AATGGGAGAAGGCTTTGAAGAAAAACCTACAAAGCTTACTACAAAAATTGTACTTAAAATAAATACAATG TATGTTATCATTATTCTCACATGGAATTTAACCATGACCAATGACATGAAAAACCATCGTTGTATTTCAA CTACAAGAACTTAATGACCAACATTCGAAAATCACACCCTCTTATCAAAATTATCAACCACTCATTCATC GATTTACCCACCCCATCCAACATCTCAGCATGATGAAACTTCGGCTCCCTGCTAGGAGTCTGCCTAATCC TACAGATCCTCACCGGCCTCTTCCTAGCCATACACTACACATCAGACACGCTGACCGCCTTTTCATCAGT TACCCATATCTGCCGCGACGTTAATTATGGCTGAATCATCCGATACATACATGCCAACGGAGCCTCCATG TTCTTTATCTGTCTATACATGCACGTAGGACGAGGAATGTACTACGGCTCCTACACCTTTTCAGAGACAT GAAATATCGGAATCATATTACTATTCACAGTTATAGCCACAGCCTTCATAGGATATGTTCTACCATGAGG CCAAATATCCTTCTGAGGGGCAACTGTAATCACTAACCTCCTATCAGCAATTCCATATATCGGGACCAAC TTAGTAGAATGGATCTGAGGGGGCTTCTCAGTAGATAAAGCTACCCTAACACGATTCTTCGCCTTCCACT TCATCCTTCCATTCATCATCTCAGCCTTAGCAGCAGTACATCTCCTATTCCTCCACGAAACAGGATCTAA CAATCCCTCAGGAATCACATCCAACTCAGACAAGATCCCATTCCACCCATACTATACAATTAAAGACATC CTGGGCCTCCTAGTACTAATCCTAGCACTCATACTACTTGTCTTATTCTCGCCAGACCTACTAGGAGACC CAGACAACTATATCCCCGCCAACCCTCTAAACACCCCTCCCCATATCAAGCCCGAATGATATTTCCTATT CGCATATGCAATTCTCCGATCCATTCCTAACAAACTAGGAGGAGTTCTGGCCCTAGTACTCTCCATCCTA GTCCTAGCGATCATCCCAATCCTCCACACCTCCAAACAACGAGGAATAATATTTCGACCACTGGGCCAAT GCCTATTCTGACTCCTAGTAGCAGACCTCCTAACCCTAACATGAATTGGCGGTCAACCCGTAGAGTATCC CTTTATCACCATCGGCCAACTAGCCTCTATCCTATACTTCTTAACCCTCCTAATCCTAATGCCCATCTCA GGCATCATTGAAAACCGTCTCCTCAAATGAAGAGTCTTTGTAGTATATAAAATACCCTGGTCTTGTAAAC CAAAAAAGGAGAACACATGCCCTCCCTAAGACTTCAAGGAAGAAGCAACAGCCCCACTATCAGCACCCAA AGCTGAAATTCTTTCTTAAACTATTCCTTGCCAATACCCAAAACCAACCCCACAACTTTCACAATTCATA TATTGCATATACCCATACTGTGCTTGCCCAGTATGTCTTCATTTCCCACAAAACAGACCAAGTAAAAAAC CCCTATTGCCACGACCCATTACACATAATGTAAAACTAACCTATCAGCCATTAATTGCCAGTCCCCATGA ATATTAAGCATGTACAGTAGTTTATATATATTACATAAGGCATACTATGTATATCGTGCATTAATTGCCA GTCCCCATGAATATTAAGCATGTACAGTAGTTTATATATATTACATAAGGCATACTATGTATATCGTGCA TTAATTGCCAGTCCCCATGAATATTAAGCATGTACAGTAGTTTATATATATTACATAAGGCATACTATGT ATATCGTGCATTAATTGCTAGTCCCCATGAATATTAAGCATGTACAGTAGTTTATATATATTACATAAGA CATTATAGTGCTTGGTCGTGCATTACACTTTGTTCTAGAACAGTTCCTTATGGATCTCAATTATCCAGAG GAAGCTTAACCACCTGGCCTCGAGAAACCAGCAATCCTTGCTCAAACGTGTACCTCTTCTCGCTCCGGGC CCATTTCAACGTGGGGGTTTCTATACTGGAACTATACCTGGCATCTGGTTCTTACCTCAGGGCCATGGGA ATTCTTAACTCCAATCCTTCAACTCTCTCAAATGGGACATCTCGAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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