Viewing data for Ictalurus punctatus
| Scientific name | Ictalurus punctatus |
| Common name | Channel catfish |
| Maximum lifespan | 16.00 years (Ictalurus punctatus@AnAge) |
| Total mtDNA (size: 16497 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7361 | 9136 | 4720 | 2641 | 4317 | 4819 |
| Base content per 1 kb (bases) | 446 | 554 | 286 | 160 | 262 | 292 |
| Base content (%) | 44.6% | 55.4% | ||||
| Total protein-coding genes (size: 11385 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5121 | 6264 | 3438 | 1683 | 3074 | 3190 |
| Base content per 1 kb (bases) | 450 | 550 | 302 | 148 | 270 | 280 |
| Base content (%) | 45.0% | 55.0% | ||||
| D-loop (size: 885 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 325 | 560 | 206 | 119 | 278 | 282 |
| Base content per 1 kb (bases) | 367 | 633 | 233 | 134 | 314 | 319 |
| Base content (%) | 36.7% | 63.3% | ||||
| Total tRNA-coding genes (size: 1555 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 674 | 881 | 380 | 294 | 393 | 488 |
| Base content per 1 kb (bases) | 433 | 567 | 244 | 189 | 253 | 314 |
| Base content (%) | 43.3% | 56.7% | ||||
| Total rRNA-coding genes (size: 2613 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1205 | 1408 | 670 | 535 | 561 | 847 |
| Base content per 1 kb (bases) | 461 | 539 | 256 | 205 | 215 | 324 |
| Base content (%) | 46.1% | 53.9% | ||||
| 12S rRNA gene (size: 953 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 469 | 484 | 265 | 204 | 202 | 282 |
| Base content per 1 kb (bases) | 492 | 508 | 278 | 214 | 212 | 296 |
| Base content (%) | 49.2% | 50.8% | ||||
| 16S rRNA gene (size: 1660 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 736 | 924 | 405 | 331 | 359 | 565 |
| Base content per 1 kb (bases) | 443 | 557 | 244 | 199 | 216 | 340 |
| Base content (%) | 44.3% | 55.7% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 300 | 384 | 216 | 84 | 185 | 199 |
| Base content per 1 kb (bases) | 439 | 561 | 316 | 123 | 270 | 291 |
| Base content (%) | 43.9% | 56.1% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 66 | 102 | 45 | 21 | 43 | 59 |
| Base content per 1 kb (bases) | 393 | 607 | 268 | 125 | 256 | 351 |
| Base content (%) | 39.3% | 60.7% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 718 | 833 | 428 | 290 | 449 | 384 |
| Base content per 1 kb (bases) | 463 | 537 | 276 | 187 | 289 | 248 |
| Base content (%) | 46.3% | 53.7% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 308 | 383 | 197 | 111 | 184 | 199 |
| Base content per 1 kb (bases) | 446 | 554 | 285 | 161 | 266 | 288 |
| Base content (%) | 44.6% | 55.4% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 366 | 418 | 233 | 133 | 217 | 201 |
| Base content per 1 kb (bases) | 467 | 533 | 297 | 170 | 277 | 256 |
| Base content (%) | 46.7% | 53.3% | ||||
| CYTB (size: 1138 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 518 | 620 | 353 | 165 | 320 | 300 |
| Base content per 1 kb (bases) | 455 | 545 | 310 | 145 | 281 | 264 |
| Base content (%) | 45.5% | 54.5% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 432 | 543 | 291 | 141 | 279 | 264 |
| Base content per 1 kb (bases) | 443 | 557 | 298 | 145 | 286 | 271 |
| Base content (%) | 44.3% | 55.7% | ||||
| ND2 (size: 1047 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 485 | 562 | 345 | 140 | 241 | 321 |
| Base content per 1 kb (bases) | 463 | 537 | 330 | 134 | 230 | 307 |
| Base content (%) | 46.3% | 53.7% | ||||
| ND3 (size: 351 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 169 | 182 | 113 | 56 | 104 | 78 |
| Base content per 1 kb (bases) | 481 | 519 | 322 | 160 | 296 | 222 |
| Base content (%) | 48.1% | 51.9% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 605 | 776 | 404 | 201 | 388 | 388 |
| Base content per 1 kb (bases) | 438 | 562 | 293 | 146 | 281 | 281 |
| Base content (%) | 43.8% | 56.2% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 141 | 156 | 94 | 47 | 84 | 72 |
| Base content per 1 kb (bases) | 475 | 525 | 316 | 158 | 283 | 242 |
| Base content (%) | 47.5% | 52.5% | ||||
| ND5 (size: 1824 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 779 | 1045 | 536 | 243 | 507 | 538 |
| Base content per 1 kb (bases) | 427 | 573 | 294 | 133 | 278 | 295 |
| Base content (%) | 42.7% | 57.3% | ||||
| ND6 (size: 516 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 241 | 275 | 187 | 54 | 78 | 197 |
| Base content per 1 kb (bases) | 467 | 533 | 362 | 105 | 151 | 382 |
| Base content (%) | 46.7% | 53.3% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%) 
Alanine (Ala, A)
n = 20 (8.81%) 
Serine (Ser, S)
n = 10 (4.41%) 
Threonine (Thr, T)
n = 25 (11.01%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 11 (4.85%) 
Leucine (Leu, L)
n = 53 (23.35%) 
Isoleucine (Ile, I)
n = 25 (11.01%) 
Methionine (Met, M)
n = 7 (3.08%) 
Proline (Pro, P)
n = 15 (6.61%) 
Phenylalanine (Phe, F)
n = 8 (3.52%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 4 (1.76%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 9 (3.96%) 
Glutamine (Gln, Q)
n = 11 (4.85%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 2 (0.88%) 
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 8 | 5 | 6 | 10 | 25 | 5 | 6 | 9 | 2 | 2 | 1 | 6 | 2 | 7 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 4 | 11 | 4 | 1 | 1 | 2 | 6 | 0 | 3 | 6 | 5 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 11 | 0 | 0 | 4 | 1 | 0 | 1 | 4 | 1 | 3 | 1 | 1 | 5 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 1 | 0 | 1 | 2 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 45 | 81 | 73 | 29 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 65 | 36 | 104 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 70 | 90 | 52 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWFAILVFSWLIFLTVIPNKVLNHTFTNEVTALSAEKLKSDTWNWPWH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 4 (7.27%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 5 (9.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 4 (7.27%)
Leucine (Leu, L)
n = 7 (12.73%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 5 (9.09%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 1 (1.82%)
Glutamic acid (Glu, E)
n = 2 (3.64%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 1 (1.82%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 2 | 0 | 3 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 2 | 2 | 0 | 1 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 3 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 11 | 11 | 18 | 16 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 16 | 15 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 18 | 26 | 8 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 46 (8.91%)
Serine (Ser, S)
n = 27 (5.23%)
Threonine (Thr, T)
n = 37 (7.17%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 42 (8.14%)
Leucine (Leu, L)
n = 62 (12.02%)
Isoleucine (Ile, I)
n = 38 (7.36%)
Methionine (Met, M)
n = 25 (4.84%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 41 (7.95%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 16 (3.1%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 16 (3.1%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 26 | 12 | 16 | 16 | 12 | 18 | 6 | 9 | 7 | 1 | 10 | 8 | 17 | 7 | 20 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 9 | 0 | 1 | 7 | 24 | 13 | 2 | 5 | 17 | 13 | 12 | 3 | 14 | 9 | 2 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 14 | 2 | 3 | 12 | 9 | 0 | 0 | 3 | 8 | 11 | 4 | 1 | 5 | 11 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 4 | 6 | 10 | 7 | 1 | 0 | 1 | 6 | 1 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 162 | 115 | 127 | 113 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 135 | 98 | 208 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 52 | 178 | 159 | 128 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.49%)
Alanine (Ala, A)
n = 15 (6.55%)
Serine (Ser, S)
n = 16 (6.99%)
Threonine (Thr, T)
n = 11 (4.8%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 21 (9.17%)
Leucine (Leu, L)
n = 28 (12.23%)
Isoleucine (Ile, I)
n = 19 (8.3%)
Methionine (Met, M)
n = 12 (5.24%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 10 (4.37%)
Tyrosine (Tyr, Y)
n = 8 (3.49%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 12 (5.24%)
Glutamic acid (Glu, E)
n = 15 (6.55%)
Asparagine (Asn, N)
n = 6 (2.62%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 7 | 7 | 9 | 1 | 11 | 3 | 3 | 8 | 0 | 4 | 8 | 9 | 0 | 3 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 2 | 3 | 8 | 2 | 2 | 0 | 2 | 6 | 0 | 2 | 7 | 5 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 4 | 0 | 2 | 9 | 2 | 0 | 1 | 2 | 5 | 3 | 1 | 1 | 3 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 13 | 2 | 3 | 9 | 2 | 2 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 62 | 55 | 42 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 24 | 53 | 63 | 90 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 82 | 81 | 51 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 22 (8.46%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 10 | 5 | 7 | 7 | 11 | 3 | 3 | 9 | 0 | 6 | 3 | 6 | 2 | 10 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 2 | 1 | 9 | 11 | 1 | 3 | 6 | 11 | 1 | 2 | 8 | 3 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 7 | 0 | 5 | 1 | 6 | 0 | 1 | 2 | 6 | 6 | 2 | 2 | 1 | 0 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 9 | 1 | 1 | 4 | 2 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 71 | 49 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 68 | 55 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 94 | 97 | 55 | ||||||||||||
| CYTB (size: 1138 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.61%)
Alanine (Ala, A)
n = 31 (8.2%)
Serine (Ser, S)
n = 25 (6.61%)
Threonine (Thr, T)
n = 21 (5.56%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 22 (5.82%)
Leucine (Leu, L)
n = 63 (16.67%)
Isoleucine (Ile, I)
n = 30 (7.94%)
Methionine (Met, M)
n = 10 (2.65%)
Proline (Pro, P)
n = 21 (5.56%)
Phenylalanine (Phe, F)
n = 31 (8.2%)
Tyrosine (Tyr, Y)
n = 14 (3.7%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.65%)
Glutamic acid (Glu, E)
n = 6 (1.59%)
Asparagine (Asn, N)
n = 19 (5.03%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 10 (2.65%)
Arginine (Arg, R)
n = 7 (1.85%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 21 | 7 | 8 | 13 | 28 | 5 | 9 | 7 | 0 | 2 | 6 | 11 | 3 | 12 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 1 | 4 | 15 | 12 | 0 | 1 | 11 | 6 | 7 | 2 | 10 | 8 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 7 | 0 | 7 | 10 | 7 | 0 | 0 | 1 | 6 | 8 | 2 | 0 | 6 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 0 | 5 | 5 | 8 | 2 | 0 | 2 | 5 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 94 | 101 | 91 | 93 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 48 | 97 | 78 | 156 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 23 | 155 | 131 | 70 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.56%)
Alanine (Ala, A)
n = 36 (11.11%)
Serine (Ser, S)
n = 19 (5.86%)
Threonine (Thr, T)
n = 17 (5.25%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 16 (4.94%)
Leucine (Leu, L)
n = 61 (18.83%)
Isoleucine (Ile, I)
n = 23 (7.1%)
Methionine (Met, M)
n = 18 (5.56%)
Proline (Pro, P)
n = 25 (7.72%)
Phenylalanine (Phe, F)
n = 18 (5.56%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 11 (3.4%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 6 (1.85%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 7 | 14 | 6 | 14 | 24 | 2 | 12 | 7 | 0 | 3 | 5 | 6 | 2 | 11 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 5 | 22 | 9 | 0 | 3 | 6 | 4 | 5 | 6 | 11 | 8 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 8 | 0 | 3 | 5 | 8 | 1 | 2 | 0 | 5 | 6 | 1 | 3 | 4 | 7 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 9 | 2 | 2 | 2 | 7 | 0 | 1 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 85 | 92 | 78 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 95 | 58 | 136 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 20 | 104 | 128 | 73 | ||||||||||||
| ND2 (size: 1047 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.89%)
Alanine (Ala, A)
n = 41 (11.78%)
Serine (Ser, S)
n = 18 (5.17%)
Threonine (Thr, T)
n = 46 (13.22%)
Cysteine (Cys, C)
n = 2 (0.57%)
Valine (Val, V)
n = 10 (2.87%)
Leucine (Leu, L)
n = 67 (19.25%)
Isoleucine (Ile, I)
n = 25 (7.18%)
Methionine (Met, M)
n = 21 (6.03%)
Proline (Pro, P)
n = 21 (6.03%)
Phenylalanine (Phe, F)
n = 11 (3.16%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.16%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.87%)
Glutamine (Gln, Q)
n = 14 (4.02%)
Histidine (His, H)
n = 8 (2.3%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 12 | 15 | 2 | 9 | 37 | 4 | 15 | 12 | 2 | 3 | 1 | 5 | 1 | 2 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 7 | 22 | 10 | 2 | 2 | 5 | 7 | 3 | 2 | 13 | 4 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 22 | 18 | 1 | 1 | 7 | 3 | 0 | 0 | 7 | 3 | 6 | 4 | 0 | 4 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 0 | 0 | 0 | 8 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 99 | 118 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 119 | 55 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 27 | 127 | 148 | 47 | ||||||||||||
| ND3 (size: 1047 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.89%)
Alanine (Ala, A)
n = 41 (11.78%)
Serine (Ser, S)
n = 18 (5.17%)
Threonine (Thr, T)
n = 46 (13.22%)
Cysteine (Cys, C)
n = 2 (0.57%)
Valine (Val, V)
n = 10 (2.87%)
Leucine (Leu, L)
n = 67 (19.25%)
Isoleucine (Ile, I)
n = 25 (7.18%)
Methionine (Met, M)
n = 21 (6.03%)
Proline (Pro, P)
n = 21 (6.03%)
Phenylalanine (Phe, F)
n = 11 (3.16%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.16%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 10 (2.87%)
Glutamine (Gln, Q)
n = 14 (4.02%)
Histidine (His, H)
n = 8 (2.3%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 12 | 15 | 2 | 9 | 37 | 4 | 15 | 12 | 2 | 3 | 1 | 5 | 1 | 2 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 7 | 22 | 10 | 2 | 2 | 5 | 7 | 3 | 2 | 13 | 4 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 22 | 18 | 1 | 1 | 7 | 3 | 0 | 0 | 7 | 3 | 6 | 4 | 0 | 4 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 0 | 0 | 0 | 8 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 99 | 118 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 119 | 55 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 27 | 127 | 148 | 47 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (6.1%)
Alanine (Ala, A)
n = 37 (8.06%)
Serine (Ser, S)
n = 33 (7.19%)
Threonine (Thr, T)
n = 36 (7.84%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 20 (4.36%)
Leucine (Leu, L)
n = 86 (18.74%)
Isoleucine (Ile, I)
n = 42 (9.15%)
Methionine (Met, M)
n = 26 (5.66%)
Proline (Pro, P)
n = 26 (5.66%)
Phenylalanine (Phe, F)
n = 15 (3.27%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 21 (4.58%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 9 (1.96%)
Asparagine (Asn, N)
n = 12 (2.61%)
Glutamine (Gln, Q)
n = 14 (3.05%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 13 | 18 | 13 | 17 | 29 | 7 | 18 | 14 | 0 | 6 | 4 | 9 | 1 | 7 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 3 | 1 | 5 | 21 | 10 | 1 | 1 | 15 | 10 | 2 | 6 | 10 | 10 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 12 | 3 | 5 | 12 | 7 | 1 | 0 | 8 | 5 | 9 | 4 | 2 | 8 | 4 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 9 | 0 | 1 | 4 | 9 | 1 | 1 | 3 | 7 | 0 | 0 | 0 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 99 | 128 | 134 | 99 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 72 | 124 | 75 | 189 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 30 | 152 | 179 | 99 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 15 (15.31%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 4 (4.08%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 1 (1.02%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (3.06%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 0 | 3 | 2 | 1 | 11 | 2 | 8 | 3 | 0 | 2 | 0 | 0 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 2 | 10 | 2 | 1 | 0 | 3 | 3 | 0 | 1 | 0 | 1 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 4 | 0 | 1 | 4 | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 27 | 27 | 17 | 28 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 14 | 33 | 13 | 39 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 34 | 42 | 17 | ||||||||||||
| ND5 (size: 1824 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 30 (4.94%)
Alanine (Ala, A)
n = 50 (8.24%)
Serine (Ser, S)
n = 46 (7.58%)
Threonine (Thr, T)
n = 54 (8.9%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 27 (4.45%)
Leucine (Leu, L)
n = 93 (15.32%)
Isoleucine (Ile, I)
n = 62 (10.21%)
Methionine (Met, M)
n = 30 (4.94%)
Proline (Pro, P)
n = 27 (4.45%)
Phenylalanine (Phe, F)
n = 39 (6.43%)
Tyrosine (Tyr, Y)
n = 10 (1.65%)
Tryptophan (Trp, W)
n = 15 (2.47%)
Aspartic acid (Asp, D)
n = 17 (2.8%)
Glutamic acid (Glu, E)
n = 10 (1.65%)
Asparagine (Asn, N)
n = 27 (4.45%)
Glutamine (Gln, Q)
n = 15 (2.47%)
Histidine (His, H)
n = 16 (2.64%)
Lysine (Lys, K)
n = 22 (3.62%)
Arginine (Arg, R)
n = 11 (1.81%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 41 | 21 | 20 | 13 | 13 | 47 | 9 | 11 | 14 | 1 | 11 | 7 | 9 | 0 | 17 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 1 | 5 | 7 | 25 | 17 | 1 | 4 | 13 | 9 | 4 | 4 | 13 | 10 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 27 | 18 | 2 | 7 | 14 | 13 | 2 | 2 | 8 | 3 | 7 | 2 | 0 | 7 | 20 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 10 | 0 | 7 | 10 | 18 | 4 | 2 | 2 | 5 | 2 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 134 | 151 | 205 | 118 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 72 | 167 | 118 | 251 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 218 | 215 | 138 | ||||||||||||
| ND6 (size: 516 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 29 (16.96%)
Alanine (Ala, A)
n = 16 (9.36%)
Serine (Ser, S)
n = 8 (4.68%)
Threonine (Thr, T)
n = 3 (1.75%)
Cysteine (Cys, C)
n = 3 (1.75%)
Valine (Val, V)
n = 25 (14.62%)
Leucine (Leu, L)
n = 28 (16.37%)
Isoleucine (Ile, I)
n = 5 (2.92%)
Methionine (Met, M)
n = 7 (4.09%)
Proline (Pro, P)
n = 4 (2.34%)
Phenylalanine (Phe, F)
n = 12 (7.02%)
Tyrosine (Tyr, Y)
n = 8 (4.68%)
Tryptophan (Trp, W)
n = 6 (3.51%)
Aspartic acid (Asp, D)
n = 3 (1.75%)
Glutamic acid (Glu, E)
n = 5 (2.92%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 2 (1.17%)
Lysine (Lys, K)
n = 2 (1.17%)
Arginine (Arg, R)
n = 4 (2.34%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 0 | 1 | 3 | 0 | 2 | 1 | 12 | 0 | 0 | 10 | 0 | 3 | 12 | 12 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 3 | 0 | 6 | 2 | 4 | 4 | 4 | 2 | 8 | 15 | 2 | 0 | 0 | 2 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 1 | 3 | 0 | 1 | 2 | 1 | 1 | 6 | 2 | 5 | 10 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 3 | 3 | 0 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 16 | 20 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 29 | 22 | 77 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 9 | 36 | 62 | ||||||||||||
| Total protein-coding genes (size: 11407 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 244 (6.42%)
Alanine (Ala, A)
n = 342 (9.0%)
Serine (Ser, S)
n = 233 (6.13%)
Threonine (Thr, T)
n = 294 (7.74%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 222 (5.84%)
Leucine (Leu, L)
n = 634 (16.68%)
Isoleucine (Ile, I)
n = 297 (7.82%)
Methionine (Met, M)
n = 172 (4.53%)
Proline (Pro, P)
n = 209 (5.5%)
Phenylalanine (Phe, F)
n = 226 (5.95%)
Tyrosine (Tyr, Y)
n = 113 (2.97%)
Tryptophan (Trp, W)
n = 122 (3.21%)
Aspartic acid (Asp, D)
n = 78 (2.05%)
Glutamic acid (Glu, E)
n = 96 (2.53%)
Asparagine (Asn, N)
n = 120 (3.16%)
Glutamine (Gln, Q)
n = 100 (2.63%)
Histidine (His, H)
n = 109 (2.87%)
Lysine (Lys, K)
n = 80 (2.11%)
Arginine (Arg, R)
n = 74 (1.95%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 179 | 118 | 113 | 92 | 103 | 254 | 51 | 112 | 93 | 7 | 61 | 46 | 85 | 30 | 108 | 118 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 59 | 10 | 17 | 54 | 174 | 99 | 15 | 26 | 86 | 83 | 49 | 34 | 99 | 68 | 8 | 52 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 123 | 110 | 9 | 38 | 81 | 61 | 7 | 9 | 37 | 49 | 64 | 30 | 22 | 47 | 73 | 31 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 78 | 81 | 15 | 29 | 49 | 67 | 13 | 6 | 19 | 43 | 6 | 0 | 0 | 6 | 3 | 92 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 982 | 992 | 1009 | 818 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 513 | 1032 | 705 | 1551 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 324 | 1285 | 1367 | 825 | ||||||||||||
>NC_003489.1 Ictalurus punctatus mitochondrion, complete genome TATAACCAACATTCCCCGACACATGCAATTTCACTATGGTTTAGTACATAATATGTATAACTCAACATCA TGGTTTAAGTACATATTATGTATAATATTACATCATGGTTTAATTCATTACATGGTATATCAACATACAA CCTACATTAAACATTTTTGTTTACAATATCAAAATAAGCCGTACATAAACCATATTAATTCAAACTCATA AATAATATATCTTAAAATGGGCTATTGCATAATTCCTAATACCTTCATAAAACCATTTTCTATGCTCTTC CCAACTATTATCGCTAATCAACATTCGATGCAGTAAGAGACCACCATCCTTGTATACCTTAAGATACACG GTCCTTGAACGATCAGGGACAAAACTTGTGAGGGTCACACAACTTGCACTATTACTGGCATCTGGTTCCT ATTTCAGGTCCATACATTTAAACTCCTCATAATATGAATTTTCCTGACATCGCTTATTGGTGTAACTACG CCGTAGCAAGCACCCCCCAAGCCAAGGCGTTCTTTTATAGGCATGGGGTTTTTCTTTTTTAGGGTCACTT TCATTTGGCATACTTCATGCAGGCAATCAACAAACATTCAAGGTCGCACTATTTTTATTCAAGCCAACCA AAAATGTAATGCTTTAATGACATACTTGAAATAATTACATAACTCTCTCTCAAGTACATAACTGATATTG CCGTTCCACATACCTCCCTAAGATCCCCCCGGGCTTCGCGCGCGGTAAACCCCCCTACCCCCCATGCCGT ACGAGTCCTAATTAATCCTGTTAAACCCCTAAACCAGGTAAGGCCCGATTGACATATTCAACAAGTAGTG ATGTGTGTTGATATATAGTGTTATAAATTCACATCATATTGTATAGCTATTGTAGCTTAAATCAAAGCAT AACACTGAAGATGTTAAGATGGACCCTAGAAATGTTCCAAAAGCACAAAGGCTTGGTCCTGGCTTTACTA TCAGCTTTAGCCCAATTTATACATGCAAGTCTCCGCACCCCTGTGAGAATGCCCTCAATCCCCTGCCCGG GGACGAGGAGCAGGCATCAGGCACACTTTCTACCCCCGCCCAAGACGCCTTGCTACGCCACACCCCCAAG GGAACTCAGCAGTAATAGACATTAAGCCATAAGTGTAAACTTGACTTAGTTAGGGCTATTAGGGCCGGTA AAATTCGTGCCAGCCACCGCGGTTATACGAAAGACCCTAGTTGCTAGCCACGGCGTAAAGGGTGGTTAAG GACAACAATGAATAAAGCTAAAGACCCCCTGGGCCGTCATACGCATTTCGGGGGCACGAAACCCTAACAC GAAAGTAGCTTTAAAAACACACCTGACCCCACGAAAGCTAAGAAACAAACTGGGATTAGATACCCCACTA TGCTTAGCCCTAAACCCAGATGTCCTCTTACACACACATCCGCCCGGGTACTACGAGCACAGCTTAAAAC CCAAAGGACTTGGCGGTGTCTCAGACCCACCTAGAGGAGCCTGTTCTATAACCGATAACCCCCGTTAAAC CTCACCACTTCTTGTTTATCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCCTAACAGTAA GCAAAATGGGCCCGCCCAAAAACGTCAGGTCGAGGTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATT TTCTATACCTAGAATATTACGAATGGCACCATGAAAATAATGCCTGAAGGTGGATTTAGTAGTAAAAAGC AAATAGAGTGTCCTTTTGAATTAGGCTCTGAGACGCGCACACACCGCCCGTCACTCTCCCCTCTGTATAT TTACCCAACATTCCTAATACATTACACATCAACACGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGA AGGTGCACTTGGAACAATCAGGACGTGGCTGAGATAGCCAAGCATCTCCCTTACACCGAGAAGACATCCA TGCAAATTGGATCGCCCTGAGCTAAACAGCTAGCTTAATTACCTAAATACCTAAAACAACATTACAACAT TTAAAAAACCTACAATACTCCAAACTAAAACATTCTACCGCCTTAGTATGTGTGACAGAAAGGGCACCAC AAAGCAATAATAAAAGTACCGCAAGGGAACGCTGAAAGAGAAGTGAAACAAATAATTAAAGCACAACAAA GCAGAGACTAGACCTCGTACCTTTTGCATCATGATTTAGCCAGCCCCAAGAGCAAAGCGCACTTTAGTTC AAGCCCCCGAAACTAAGTGAGCTACCCCGAGACAGCCTATTAATTAGGGCCAACCCGTCTCTGTGGCAAA AGAGTGGGAAGATCTCCGGGTAGAGGTGACAAACCTACCGAACTTAGTTATAGCTGGTTGCCTAAGAAAT GAATAGAAGTTCAGCCTCGTACTCCTCATCTCACAAATACTTTTATATTAACGAGCCCGAGAAACCTACG AAAGTTAGTCAAAGGGGGTACAGCCCCTTTGAAACAGGACACAACCTCACCAGGAGGTTAAAGATTATAC TAAATAAGATACGCCGCTCCAGTGGGCCTAAAAGCAGCCATCTGAACAGAAAGCGTTAAAGCTCCGGCAG ACTACAATCTATTATTTAAATATTTTATCTTAAACCCCTAATCATATTAGGCCAATCCATGCCCGCATGG ATGAGATACTGCTAAAATGAGTAATAAGAAGGAACCCCCTTCTCCTAGCCTACGTGTACGCTAAATTGGA CCTACCACTAGCAATTAACGAACCCAATTAAAGAGGGCATTATGGTTATATTAAATATCAAGAAATCTCC ATACACCTGCATCGTTAACCCCACACCGGAAGGCAGAATAGGAAAGACTAAAAGAAAAGGAAGGAACTCG GCAAACATAAGCCTCGCCTGTTTACCAAAAACATCGCCTCCTGCAAAAATCAACGTATAGGAGGTCTTGC CTGCCCAGTGACATGTTAAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGCAATCACTTGTCTCTTA AATGGAGACCTGTATGAATGGTGGAACGAGGGCTTAACTGTCTCCCCTTTCAAGTCAATGAAATTGATCT GCCCGTGCAGAAGCGGACATATAAATACAAGACGAGAAGACCCTTTGGAGCTTAAGATACAAGATCATCT ATGTCAAGGACTTAGTCAAACTAAATAGCACCTGATCCTAATCTTCAGTTGGGGCGACCACGGGAGAAAA TAAAGCTCCCACGCGGACTGGGGCAATCCCCCTAAAACCAAGAGATACACCTCTAAGTCGCAGAATTTCT GACCAAAAGATCCGGCTTCCTGCCGACCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCCCTTT CAGAGTCCATATCGACAAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCT ATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCA GTTTCTATCTGTAATGCCACTTTCCCCAGTACGAAAGGACCGGAAAAGGGGGGCCCATACTATAAGCACG CCCCACCCCAACTTAATGACATCAACTAAATTAAACAAAGGGGGGCACAATCCCACATCAAGATAAGATT ATTAAGGTGGCAGAGCCCGGTAATTGCAAAAGGCCTAAGCCCTTTCAGCCGGAGGTTCAAATCCTCCCCT TAATTATGATAACCCCTTTAATTACCCACATTATTAACCCCTTGGCCTACATTGTGCCAGTATTACTAGC AGTAGCCTTCCTAACATTAATTGAGCGTAAAGTCCTAGGGTATATACAATTACGCAAAGGCCCAAATGTT GTAGGCCCCTACGGCCTCCTTCAACCAATTGCAGACGGGGTTAAACTCTTCATTAAAGAGCCCATCCGCC CATCAACCTCCTCTCCATTTTTATTCCTCACCGCCCCCATACTGGCCCTAACCCTAGCATTAATACTATG GGCCCCCATACCTCTCCCCCACCCCGTGACTGACCTAAACCTCGGTATATTATTTATTCTGGCCCTCTCT AGTCTAGCAGTTTACTCCATTCTAGGGTCAGGCTGAGCCTCCAATTCAAAATATGCCCTTATTGGGGCTC TCCGAGCAGTCGCCCAAACTATCTCCTATGAAGTCAGTCTCGGCCTAATCCTTCTATCAATTATTATCTT TACAGGAGGTTTTACTCTCCAAATATTTAACATGACACAAGAAGCTATCTGACTTCTAATCCCTGCCTGA CCTCTAGCCGCCATATGATATATTTCTACCCTCGCAGAAACAAACCGAGCCCCCTTTGATCTCACAGAAG GCGAATCAGAATTAGTATCGGGGTTTAACGTAGAATACGCCGGAGGTCCTTTCGCACTCTTTTTCCTAGC CGAATACGCCAACATTCTCCTAATAAATACACTATCAGCCATCCTATTTCTAGGAGCAATGCACTTTCCA CATGCTCCCGAATTAGCCTCAATAAATATTATAATAAAAGCTGCCCTATTGTCCATGTTGTTTTTATGAG TCCGCGCTTCATACCCCCGATTCCGATATGATCAACTTATACATTTAGTATGAAAAAACTTCCTACCAAT AACATTAGCCCTTATTCTATGACATGCCGCCCTACCTGTCGCACTCACAGGACTACCACCCCAACTATAA TGGAGCCGTGCCTGAATGCCCAAGGACCACTTTGATAGAGTGACACATGGAGGTTAAAGTCCTCCCAGCT CCTTAGAAAGAAGGGATTTGAACCCATATTATGGAGATCAAAACTCCAAGTGTTTCCATTACACCACTTC CTAGTAAGATCAGCTAAATTAAGCTTTTGGGCCCATACCCCAAAAATGTAGGTTAAAACCCTTCTCTTAC CAATGAGCCCCTACGTCATCACAATTTTATTATCAAGCCTAGGTCTAGGCACCGCTCTTACCTTCATAAG CTCCCACTGGCTGCTAGCATGGATAGGACTAGAAATTAATACCCTAGCGATCCTTCCCCTAATAGCTCAA CACCATCACCCCCGAGCAGTAGAAGCCACCACCAAGTACTTCCTAGCCCAAGCCGCTGCTGCAGCAACCA TCCTATTTGCCAGCACCATTAACGCCTGAACTACGGGAGAATGAAACATTTATTGCCTATCCCACCCCGC CGCAACAATCCTAATTACCATAGCGCTAGCATTAAAAGTAGGACTAGCCCCCGTACACTTCTGAATGCCC CCTGTTATACAGGGCTTAACCCTAACCACCGGACTAATTATGGCTACCTGACAAAAACTGGCCCCATTCG CACTAATCATTCAAATGGCCCCCTTCACCCACCCCCTCCTATTAACAACCCTAGGATTACTATCCGTTTT CATCGGGGGCTGGGGAGGTTTAAATCAAACTCAATTACGAAAAATCTTAGCCTACTCATCCATCGCCCAT CTCGGCTGAATAATCATTGTTACACAATATAAACCACAACTAACTGTGCTAGTATTAATTACTTATATCA TCATAACATCAGCAACATTCCTAACATTTAAACTAATAGCCACCACAAAAATTAATACCCTAGCAATAAG CTGGGCCAAAGTACCCACTATTACAGCCATAGCTGCTCTAGCCCTACTATCCCTAGGAGGGCTCCCCCCA CTAACAGGCTTCATACCAAAATGATTAATTTTACAAGAACTCACCATGCAAGGGCTGCCGCTCACCGCAA CAATAATGACACTCAGCGCCCTATTAAGCCTATACTTCTACCTACGACTATGCTACGCCATAACATTAAC AATCTCCCCTAACACAAACAACTCTTCCGCCCCCTGACGTTTACAAAATACACAAGCCACAGCCCCGCTA GCCACCCTAATAATTATAACCCTGCTACTCCTCCCCCTCACCCCCCTAGCCCAGACACTAACCAACTAGA GATTTAGGACAACACAAGACCAAAAGCCTTCAAAGCTTTAAGTAGGAGTGAAAATCTCCTAATCTCTGCA TAAGACTTGCAAGACTTTATCTCACATCTTCTGAATGCAACCCAGACACTTTAATTAAGCTAAAGCCTTT CTAGATGAGAAGGCCTCGATCCTACAAACTCCTAGTTAACAGCTAGACGCTCAAGCCAGCGAGCATTCAT CTACTTTCCCCGCCTCCCGCCCAAAAGGCGGGGAAAGCCCCGGTAGGCGGTTAGCCTACTTCTTAAGATT TGCAATCTAACGTGTAATACACCACGGGACTCCTGATAGAGAAAGGACTTAAACCTTTGTTCATGGAGCT ACAATCCACCGCCTAACTCTCGGCCACTCTACCTGTGACGATCACGCGCTGATTTTTCTCAACCAACCAT AAAGATATTGGCACCCTTTACCTTGTATTTGGTGCCTGAGCCGGAATAGTGGGTACCGCCCTTAGCCTGC TTATCCGGGCGGAATTAGCCCAACCCGGCGCCCTTCTAGGCGATGACCAAATTTACAATGTTATTGATAC TGCTCACGCCTTTGTAATAATTTTCTTTATAGTAATACCAATTATGATTGGAGGGTTTGGAAACTGGCTT GTTCCCCTAATGATCGGAGCGCCAGATATGGCCTTCCCTCGAATGAACAACATAAGCTTCTGGCTCCTGC CCCCCTCCTTCCTACTTCTGCTCGCCTCCTCCGGAGTTGAAGCAGGAGCAGGAACAGGGTGAACTGTCTA CCCGCCTCTTGCCGGCAACCTCGCACATGCAGGGGCCTCCGTAGATTTAACTATCTTTTCCCTTCATCTT GCAGGAGTTTCATCTATTCTTGGGGCCATTAACTTTATTACAACAATTATTAATATGAAGCCCCCCGCAA TCTCACAATATCAAACCCCCCTATTTGTCTGAGCCGTCCTAATTACAGCCGTCCTCCTACTACTATCCCT CCCAGTTTTAGCCGCTGGTATCACAATGCTTCTAACAGACCGAAACTTAAATACTACCTTCTTTGACCCT GCAGGGGGAGGCGACCCCATTCTTTACCAACACCTTTTCTGATTCTTTGGGCACCCAGAAGTATACATTT TAATTTTGCCAGGCTTTGGCATAATCTCCCATATTGTTGCCTACTACGCAGGCAAAAAAGAACCATTCGG CTATATGGGAATAGTCTGAGCTATAATAGCCATTGGCCTTCTAGGCTTTATTGTATGAGCACATCACATA TTCACTGTAGGGATAGACGTGGACAATCGAGCATATTTTACATCTGCAACAATAATTATTGCAATCCCAA CTGGGGTCAAAGTATTTAGCTGACTTGCTACCCTACACGGTGGCTCAATTAAATGAGAAACTCCCCTGCT CTGAGCCCTAGGTTTCATCTTCCTCTTTACTGTTGGGGGCTTAACTGGCATTGTCCTAGCCAACTCATCC CTAGACATTGTTCTACATGACACCTATTATGTAGTAGCCCATTTCCATTATGTGTTATCAATGGGGGCTG TATTTGCTATTATGGGGGCCTTCGTTCACTGATTCCCCCTCTTTACAGGATACACAATACACGACACCTG AACAAAAATTCACTTCGGAACTATATTTGTGGGGGTAAATCTCACCTTCTTCCCCCAACACTTCTTAGGC CTCGCTGGCATACCACGACGATACTCAGACTACCCCGATGCCTACTCACTATGAAACATCATCTCTTCAA TCGGCTCCCTGGTGTCCCTAGTAGCAGTTGTAATATTCCTGTATATTTTATGGGAGGCCTTTACTGCCAA ACGAGAAGTACTCTCCGTCGAACTCACCTCCACAAACGTAGAGTGGCTACACGGATGCCCCCCACCCTAT CACACATTTGAGGAGCCGGCCTTCGTGCAAGTACAGACAAACTAACGAGAAAGGAAGGAATCGAACCCCC ATAAACTAGTTTCAAGCCAGTTACATAACCACTCTGTCACTTTCTTCCATAAGATACTAGTATAATTGAA CAATACCCTGCCTTGTCAAGGCAAAATTGTAGGTTGAAATCCTGCGTATCTTGAGCCTCACGGCTCAATG GCACATCCCTCACAACTAGGATTCCAAGACGCGGCCTCCCCTGTAATAGAAGAACTTCTGCACTTCCACG ACCACGCCTTAATAATTGTTTTCCTAATTAGCACCTTAGTCCTATACATTATTGTTGTTATAGTAACCAC CAAGCTTACCAATAAGTTTATCCTAGACTCCCAAGAAATTGAAATTGTCTGAACCATCCTCCCAGCAGTA ATCCTTATTCTAATTGCCCTTCCTTCCCTTCGAATTCTTTATCTAATGGATGAAGTAAATGATCCCCACT TGACAGTAAAAGCCATGGGCCATCAATGGTATTGAAGCTATGAGTATACTGACTACGAAAATTTAGCTTT CGACTCCTATATAATCCCCACACAAGACCTGGTCCCAGGACAATTCCGACTACTTGAAACAGACCATCGA ATAGTAATTCCAATAGAATCCCCAATCCGAGTACTAGTCTCAGCTGAAGACGTCCTACACTCCTGAGCTG TCCCCGCGCTGGGCATCAAAATAGATGCCGTCCCAGGACGACTAAACCAAACATCCTTTATTACCTCCCG CCCCGGAGTATTCTACGGACAATGCTCTGAAATTTGCGGAGCCAACCACAGTTTCATGCCCATCGTCGTA GAAGCCGTTCCCCTAGAGCACTTTGAAAACTGATCCTCTCTTATGCTTGAAGACGCCTCACTAGGAAGCT AAATAGGGATTAGCATTAGCCTTTTAAGCTAAAGATTGGCGGCCCCCAACCGCCTCTAGTGATATGCCAC AATTAAATCCCGCCCCATGATTTGCAATCCTTGTATTCTCGTGATTAATTTTCTTGACAGTAATCCCAAA CAAAGTCTTAAACCACACCTTCACAAATGAAGTCACAGCACTTAGTGCCGAAAAACTTAAATCAGACACC TGAAACTGACCATGGCACTAAACCTGTTTGACCAATTTATAAGCCCCACACATCTCGGTATCCCCCTAAT TGCTATTGCTCTCACCCTCCCTTGAATTTTAATCCCTTCCCCAACCAGCCGCTACCAAAATAACCGACTA ATCTCCCTACAAAGTTGATTCATCAAAACCTTTACACAACAACTGCTCACCCCACTAAATCAAGCTGGAC ATAAATGAGCCTTAATTCTAGCCTCCCTAATAATTTTTATTCTTACTCTAAATGTGCTAGGACTATTGCC ATACACATTTACCCCCACAACACAGCTGTCCTTAAATATAGGACTGGCCGTACCGCTATGGCTAGCCACA GTAATTATTGGCCTCCGAAACCAGCCCACTGCGGCCCTAGGACACCTCCTACCAGAAGGAACTCCCGCCC TTTTAATTCCAATTCTAATTATTATTGAAACCATCAGCTTATTTATTCGCCCTCTAGCCCTCGGAGTCCG ACTCACAGCTAATCTTACAGCCGGCCACCTGCTAATTCAACTAATCTCAACAGCAACCATCACCCTTATG CCCATAATAACCACAGTAGCAACCCTTACCGCCATTCTTCTAGTGCTATTAACACTCCTAGAGGTTGCAG TAGCCATCATTCAAGCCTACGTATTTGTTCTCCTACTAAGCCTATATCTACAAGAAAACGTATAATGGCC CACCAAGCACATGCATACCACATGGTTGACCCAAGCCCATGGCCCCTAACCGGAGCAGTAGCTGCACTCT TAATAACATCAGGTCTAGCAATCTGATTTCATTTCCACTCAACCGTTCTTATAACACTAGGACTAATTCT ACTGCTCCTTACCATGTATCAATGATGACGAGACATCATCCGAGAAGGCACCTTCCAAGGACACCACACT CCCCCCGTACAAAAAGGCCTGCGATACGGAATAATTTTGTTTATCACCTCTGAAGTATTCTTCTTTCTAG GGTTTTTCTGAGCATTCTACCACTCTAGCCTCGCCCCTACTCCCGAACTTGGAGGATGCTGACCCCCCAC AGGTATCACTCCCTTGGACCCATTCGAAGTCCCCCTCCTTAATACTGCAGTTTTATTAGCATCTGGTGTT ACCGTAACATGGTCCCACCACAGTCTGATAGAAGGAGAACGCAAACAAGCAGTTCAATCTCTCACCCTAA CAATCCTCCTAGGATTCTATTTTGCCGCCCTTCAAGCCATAGAGTACTATGAAGCCCCTTTCACTATTGC AGACGGAGTGTACGGCTCAACTTTCTTTGTGGCAACAGGCTTTCACGGACTACACGTCATCATCGGCTCA ACCTTCCTTGCCATCTGCCTCCTTCGACAAATCCAATATCACTTTACATCAGAACACCACTTTGGATTCG AAGCGGCCGCCTGATATTGACACTTTGTAGATGTTGTATGACTATTCCTATATGTCTCTATTTACTGATG AGGCTCATATCTTTCTAGTATTAAAGTTAGTACGAATGACTTCCAATCATCTAGTCTTGGTTAAAGCCCA AGGAAAGATAATGAACTTAATTATAGTTGTTACACTTATCACTCTCATCCTCTCCACAATCCTGGCTACA GTATCATTTTGGCTTCCCCAAATAACCCCCGATGCAGAAAAGCTCTCCCCCTACGAATGCGGTTTCGACC CTTTAGGCTCTGCACGCCTACCCTTCTCCCTACGCTTCTTTCTAGTCGCCATCCTATTCTTGCTGTTTGA CCTGGAAATTGCCCTCCTGCTCCCCCTTCCATGAGGCAATCAACTACTAACTCCCGCTTACACCCTTCTA TGAGCTGCAACCATTTTAATCCTACTCACCCTAGGCCTAATTTATGAGTGGGTACAGGGTGGCCTAGAAT GGGCCGAATAGGGGACTAGTCCAAATTAAGACCTCTGATTTCGACTCAGAAAACCGCGGTTTAATTCCGC GGTCCCCTTATGACACCAGTTTACTTCAGCTTCACCTCCGCGTTTACACTAGGACTTACTGGACTAGCAT TCCACCGCACCCACCTGCTTTCAGCCCTACTATGCTTAGAAGGCATAATACTATCTTTATTTATTGCCCT AGCCCTATGAATACTACAACTAGAGTCCACTGCCTTCTCCGCCGCCCCTATTTTATTATTAGCTTTTTCA GCCTGTGAAGCTGGCGCAGGCTTAGCCCTCCTAGTTGCCACAGCCCGAACTCACGGAACAGACCGGCTGC AATCCTTAAACCTATTACAATGCTAAAAATTCTAATTCCAACGATTATGTTATTTCCAACAATTTGACTC TCCCCTTCCAAATGAGTTTGAACTACTACGACCCTTCAAAGCTTAATTATCGCCCTAGTCAGCCTTAGCT GAATTAATTGGTCCTCAGAAACAGGCTGAGCTTCCTCTAACTTATATATAGGCACGGACCCTTTGTCAAC TCCCCTTTTAGTGCTCACTTGTTGACTACTCCCCCTCATAATTCTCGCTAGCCAAAATCACATTAAAGCC GAACCCATTGCCCGTCAACGAAACTACATTACCCTACTAGCCTCCTTACAAACCTTTTTAATTATAGCAT TTGGGGCAACCGAAATCATTATATTCTACATTATATTTGAAGCAACCCTAATCCCCACCCTTATTATTAT TACCCGCTGAGGAAATCAAGCTGTACGACTAAGCGCAGGAACATACTTCTTATTCTACACCCTGGCCGGC TCCCTCCCCCTACTGGTCGCCCTGCTCCTCCTACACCAAAACACAGGATCTCTTTCAATACTTATTATTC AATATTCACAACCAATGGCCCTTAGCTCCTGAGGAGATAAAATCTGATGAGCAGGCTGTCTAATCGCCTT CCTAGTAAAAATGCCCTTATATGGAGTTCACCTCTGACTACCAAAAGCCCACGTAGAAGCTCCAGTAGCC GGATCCATGGTACTAGCAACAATTTTACTAAAACTTGGAGGCTACGGCATAATACGAATAATACTTATAC TAGACCCCCTGTCCAAAGACATAGTATATCCTGTTATTGCACTAGCCCTCTGAGGCGTACTAATGACAGG CTCTATCTGCTTACGACAAACAGACTTAAAATCATTAATTGCCTACTCATCCGTCAGCCACATAGGCCTT GTTGCAGGCGGAATTTTAATCCAAACCCCATGAGGCTTTACCGGCGCCCTCGTATTAATAATTGCCCATG GCCTAGTCTCGTCTGCCCTATTCTGTTTGGCCAATACCACTTACGAACGCACCCACAGCCGAACAATAAT CTTAGCCCGCGGAATACAAATCATCTTTCCACTAACAGCCGTTTGATGGTTCCTCTCTAATCTAGCAAAC CTGGCCCTCCCCCCTCTACCAAATCTAATAGGAGAACTTGTAATTATCACCGCACTGTTTAATTGGTCCC CCTGAACCCTAATCTTAACTGGGGCCGGCACACTAATTACCGCGGCCTACTCACTATATTTATTCTTAAT GTCCCAACGAGGCCCCCTCCCACAACATATTATTAATCTGCAACCTTTCCACACACGAGAACATCTACTA ATGATTCTTCACCTCCTTCCAGTTGCTCTCCTCATTACAAAGCCTGAAATCATATGAGGTTGATGGTACT GTAGATATAGTTTAACACAAAACATTAGATTGTGGTTCTAAAAATGGAAGTTAAACCCTTCCTATCCACC GAAAGAGGCCCAGGGCAGTAGAGACTGCTAATCCCTATTACCACGGTTAAACTCCGTGGCTCATTCAAAG CTCCTAAAGGATAATAGTTCATCCGTTGGTCTTAGGAACCAAAGACTCTTGGTGCAACTCCAAGTAGCAG CTATGGCAGATATTATAACCACCACCCTTCTTCTCACCCTAGCAATTCTAATGTGACCTCTTATAACAAC ACTAAGTCCCACCCCCTTAGACCAAAAATGGGCCCTAAAATACGTCAAAACCGCCGTAAGCACTGCATTT TTTATTAACACTATCCCCCTTATTATTTTCTTAGACCAAGGAACAGAAAGTATCATCACCACCTGAAACT GAATAAATATTATAAACTTTGACATCAATATTAGCTTTAAATTTGACCATTACTCACTGATTTTCACCCC CATTGCCCTATACGTAACATGGTCTATTCTAGAATTTGCATCATGATATATACACTCTGACCCCTACCTA AACCGGTTCTTCAAATATTTACTACTATTTCTAGTAGCCATAGTCATCTTAGTCACTGCCAACAACATAT TTCAACTATTCATCGGCTGAGAAGGCGTCGGTATTATATCCTTCCTACTAATCGGATGATGACACGGCCG AGCCGACGCTAACACAGCAGCCCTACAAGCAGTTATCTATAACCGAGTTGGTGATGTTGGCCTAATTCTA ACCATTGCTTGAATTGCAATAAACCTTAACTCCTGAGAAATTCCACAAATTTTTCTACTATCCAAAGACT TTGACATAACCCTCCCATTAATGGGGCTTATCTTAGCTGCCACAGGAAAGTCTGCTCAATTTGGACTACA CCCATGACTACCATCAGCGATAGAAGGCCCAACCCCAGTTTCAGCCCTACTGCATTCAAGCACAATAGTA GTTGCAGGCATCTTTCTACTAATTCGACTCCACCCTCTAATACAAGATAATCAACTAGCCCTAACCGTCT GCCTCTGCCTCGGCGCTCTAACGACCCTATTCACCGCAACCTGTGCTCTTACCCAAAATGACATCAAAAA AATTGTAGCATTCTCAACATCAAGCCGACTGGGGCTCATGATGGTTACTATTGGCCTAAACCAGCCCCAA TTAGCCTTCCTGCACATTTGCACCCACGCCTTCTTTAAAGCCATATTATTCTTATGCTCGGGCTCAATTA TCCACAGCCTCAACGACGAACAAGATATTCGTAAAATAGGAGGCCTACACAAACTAATGCCATTCACCTC ATCCTGCCTTATTATTGGCAGCCTTGCACTAACAGGCATGCCTTTTCTAACAGGGTTCTTCTCAAAAGAT GCAATTATTGAAGCCCTCAACACCTCCCACCTAAACGCCTGAGCCCTAGCCTTAACACTAATTGCCACCT CCTTCACCGCAGTCTACAGCCTTCGGGTTATTTTCTTCGTAGTTATGGGCTCCCCCCGATTCTCAACTTT ATCCCCAATTAACGAAAACCATCCCGCAGTAATTGCATCTATTGAACGTCTAGCCTGAGGAAGCATCATC GCAGGACTAATCATTACCTCAAACTTCCTACCATCCAAGGCCCCCGTCATGACAATACCCCTTTCCCTTA AAATTGCTGCCATGGCAGTTACGATCCTGGGGGTTATTATTGCCCTAACACTAGCCACAACAACCTCTAA ACAAATCAAAATTACCTCGCTCCTGACTCCCCACAACTTTTCCAACATACTAGGATTCTTCCCATCAATC ATTCATCGCTCCCTCCCTAAGCTTAACCTAGTACTAGGTAAACAAGCCACAAAACTCGATCGCCAATGAA TAGAAATAGGACCCAAAGGTCTCCATCCCCTGCACTTCACCCTGTCCTCTATATTTGATAATATTAATAC TAATATCATCAAGGTTTACCTGACCTTTTACCTAATTTCTACAGCCCTAATTATTGTACTACTCTCCACA ATCTAAACCGCCCGAAGGGCCCCCCGGCTTAGGCCACGAGTTAATTCTAAAATCACAAAAAGACACAATA ATAATACTCATGCACACACCACCAGCATTCCCCCACCAACAGAGTACATTAAAGAAATTCCACCAATATC CCCGCGCACCATAAAAAACTCTTTAAACTCATCAATAACCCAATATCCCCCGTGCCCGCCCCAAAACCAC CACACTGCAACTCCTACTCCAAACAAATACATCAAAACATAAACCTTTACCGACCCCGCCCCCCACGTCT CAGGAAAAGGTTCAGCGGCCAAAGCCGCTGAATATGCAAACACCACCAACATTCCCCCCAAATAAATTAA AAACAATATTAAACCAACTAACGACCCACCATGCCCCACTAAAACCCCACACCCAACCCCTCCTGCCACA GCTAGCCCTAAAGCAGCAAAATACGGCGCCGGATTAGAAGCAACTCCCACCAACCCCACCACTAAACTTA ACAAAAACAAATCAAGAAAGTATGTCATAATTTTCACCCGGGCTCTAACCAGGACTAATGACTTGAAAAC CCACCGTTGTTATTCAACTATGAGAACCATGATCACCCGAAAAACCCACCCGCTCTTCAAAATTGCCAAC AATGCACTAATTGATCTACCCGCCCCATCTAATATCTCCGCATGATGAAACTTCGGCTCTCTACTATTAT TATGTCTTATAGCACAAATCCTAACAGGGCTCTTCCTAGCTATGCACTACACCTCAGACATCTCAACTGC CTTTTCATCCGTCGCCCACATCTGCCGAGATGTAAACTACGGGTGGCTTATCCGCAACCTCCACGCTAAC GGAGCCTCCTTCTTCTTTATCTGTATTTACTTACATATTGGACGAGGCCTATATTATGGTTCCTACCTTT ATAAAGAAACTTGAAACATCGGAGTGGTCCTTCTACTACTAGTAATAATAACCGCATTTGTGGGCTATGT ACTACCATGAGGACAAATGTCATTCTGAGGCGCCACAGTCATTACAAACCTCCTATCAGCTGTGCCTTAC ATAGGAGATGCCCTTGTACAATGAATCTGGGGCGGGTTTTCCGTAGATAATGCAACACTAACCCGATTCT TCGCATTCCACTTCCTACTGCCATTCGCAATCATCGCAGCAACACTACTCCACGCCCTATTTCTACATGA AACAGGCTCTAACAACCCAATCGGACTAAACTCTGACGCAGACAAAATTTCCTTCCACCCATACTTTTCT TACAAAGACCTCCTAGGCTTTGTTTTCCTCATTACAGCCCTCGCCTCACTAGCCCTTTTCTCTCCCAACC TCCTGGGCGATCCAGAAAATTTCACCCCCGCCAACCCCTTAGTAACCCCTCCCCACATCAAGCCCGAATG ATATTTTTTATTTGCTTACGCCATCCTACGATCAATCCCCAATAAACTTGGGGGGGTACTAGCACTACTA CTCTCCATTCTAGTACTTATAGTTGTCCCCCTCCTGCACACTTCTAAGCAACAAGGCCTCACTTTCCGCC CCCTCTCCCAACTATTATTTTGAACCCTAGTCGCAGACGTAGCCATCCTGACCTGAATCGGCGGGATACC CGTAGAACACCCATTCATCATCATCGGGCAAGTCGCCTCCGTACTGTATTTCTCCTTATTTCTAATCTTT AGCCCATTAATAGGCTGATTAGAAAACAAAACCATTAATTTCAAATGCTCTAGTAGCTTAAACATAAAGC GCCGGTCTTGTAATCCGGAGACTGAAGGTTCGACTCCCTCCTAGCGCCAGAAAAAGGAGATTTTAACTCC CACCCCTAACTCCCAAAGCTAGAATTCTTAATTAAACTATTTTCTGC
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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