Viewing data for Rattus lutreolus
| Scientific name | Rattus lutreolus |
| Common name | Australian swamp rat |
| Maximum lifespan | 4.40 years (Rattus lutreolus@AnAge) |
| Total mtDNA (size: 16295 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6374 | 9921 | 4338 | 2036 | 4399 | 5522 |
| Base content per 1 kb (bases) | 391 | 609 | 266 | 125 | 270 | 339 |
| Base content (%) | 39.1% | 60.9% | ||||
| Total protein-coding genes (size: 11333 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4545 | 6788 | 3262 | 1283 | 3094 | 3694 |
| Base content per 1 kb (bases) | 401 | 599 | 288 | 113 | 273 | 326 |
| Base content (%) | 40.1% | 59.9% | ||||
| D-loop (size: 875 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 326 | 549 | 222 | 104 | 257 | 292 |
| Base content per 1 kb (bases) | 373 | 627 | 254 | 119 | 294 | 334 |
| Base content (%) | 37.3% | 62.7% | ||||
| Total tRNA-coding genes (size: 1498 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 520 | 978 | 298 | 222 | 424 | 554 |
| Base content per 1 kb (bases) | 347 | 653 | 199 | 148 | 283 | 370 |
| Base content (%) | 34.7% | 65.3% | ||||
| Total rRNA-coding genes (size: 2527 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 953 | 1574 | 536 | 417 | 609 | 965 |
| Base content per 1 kb (bases) | 377 | 623 | 212 | 165 | 241 | 382 |
| Base content (%) | 37.7% | 62.3% | ||||
| 12S rRNA gene (size: 962 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 370 | 592 | 213 | 157 | 231 | 361 |
| Base content per 1 kb (bases) | 385 | 615 | 221 | 163 | 240 | 375 |
| Base content (%) | 38.5% | 61.5% | ||||
| 16S rRNA gene (size: 1565 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 583 | 982 | 323 | 260 | 378 | 604 |
| Base content per 1 kb (bases) | 373 | 627 | 206 | 166 | 242 | 386 |
| Base content (%) | 37.3% | 62.7% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 264 | 417 | 193 | 71 | 193 | 224 |
| Base content per 1 kb (bases) | 388 | 612 | 283 | 104 | 283 | 329 |
| Base content (%) | 38.8% | 61.2% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 71 | 133 | 58 | 13 | 58 | 75 |
| Base content per 1 kb (bases) | 348 | 652 | 284 | 64 | 284 | 368 |
| Base content (%) | 34.8% | 65.2% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 636 | 909 | 392 | 244 | 466 | 443 |
| Base content per 1 kb (bases) | 412 | 588 | 254 | 158 | 302 | 287 |
| Base content (%) | 41.2% | 58.8% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 278 | 406 | 187 | 91 | 181 | 225 |
| Base content per 1 kb (bases) | 406 | 594 | 273 | 133 | 265 | 329 |
| Base content (%) | 40.6% | 59.4% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 326 | 458 | 220 | 106 | 223 | 235 |
| Base content per 1 kb (bases) | 416 | 584 | 281 | 135 | 284 | 300 |
| Base content (%) | 41.6% | 58.4% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 483 | 660 | 343 | 140 | 314 | 346 |
| Base content per 1 kb (bases) | 423 | 577 | 300 | 122 | 275 | 303 |
| Base content (%) | 42.3% | 57.7% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 387 | 568 | 285 | 102 | 272 | 296 |
| Base content per 1 kb (bases) | 405 | 595 | 298 | 107 | 285 | 310 |
| Base content (%) | 40.5% | 59.5% | ||||
| ND2 (size: 1036 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 406 | 630 | 317 | 89 | 260 | 370 |
| Base content per 1 kb (bases) | 392 | 608 | 306 | 86 | 251 | 357 |
| Base content (%) | 39.2% | 60.8% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 124 | 224 | 89 | 35 | 108 | 116 |
| Base content per 1 kb (bases) | 356 | 644 | 256 | 101 | 310 | 333 |
| Base content (%) | 35.6% | 64.4% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 540 | 838 | 398 | 142 | 375 | 463 |
| Base content per 1 kb (bases) | 392 | 608 | 289 | 103 | 272 | 336 |
| Base content (%) | 39.2% | 60.8% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 127 | 170 | 93 | 34 | 83 | 87 |
| Base content per 1 kb (bases) | 428 | 572 | 313 | 114 | 279 | 293 |
| Base content (%) | 42.8% | 57.2% | ||||
| ND5 (size: 1833 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 723 | 1110 | 535 | 188 | 495 | 615 |
| Base content per 1 kb (bases) | 394 | 606 | 292 | 103 | 270 | 336 |
| Base content (%) | 39.4% | 60.6% | ||||
| ND6 (size: 517 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 204 | 313 | 168 | 36 | 87 | 226 |
| Base content per 1 kb (bases) | 395 | 605 | 325 | 70 | 168 | 437 |
| Base content (%) | 39.5% | 60.5% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 14 (6.19%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 23 (10.18%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 11 (4.87%) 
Leucine (Leu, L)
n = 41 (18.14%) 
Isoleucine (Ile, I)
n = 29 (12.83%) 
Methionine (Met, M)
n = 13 (5.75%) 
Proline (Pro, P)
n = 14 (6.19%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 9 (3.98%) 
Glutamine (Gln, Q)
n = 6 (2.65%) 
Histidine (His, H)
n = 9 (3.98%) 
Lysine (Lys, K)
n = 5 (2.21%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 19 | 10 | 11 | 7 | 4 | 18 | 4 | 8 | 6 | 0 | 0 | 1 | 10 | 0 | 6 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 1 | 8 | 5 | 0 | 0 | 4 | 5 | 1 | 4 | 1 | 9 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 11 | 0 | 2 | 1 | 7 | 0 | 0 | 4 | 1 | 1 | 1 | 0 | 2 | 7 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 3 | 1 | 1 | 0 | 5 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 40 | 67 | 83 | 37 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 61 | 37 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 65 | 104 | 49 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITIISSMITLFILFQLKISSQTFPATPSPKIMATEKSNNPWELKWTKIYLPLSLPQQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (2.99%)
Serine (Ser, S)
n = 8 (11.94%)
Threonine (Thr, T)
n = 8 (11.94%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 8 (11.94%)
Isoleucine (Ile, I)
n = 8 (11.94%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 1 (1.49%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (7.46%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 5 | 2 | 1 | 0 | 3 | 0 | 3 | 4 | 1 | 0 | 0 | 0 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 4 | 1 | 1 | 3 | 3 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 16 | 26 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 25 | 17 | 23 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 17 | 32 | 14 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 35 (6.81%)
Threonine (Thr, T)
n = 35 (6.81%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.78%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.11%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 15 | 27 | 15 | 7 | 19 | 2 | 16 | 6 | 0 | 12 | 4 | 24 | 0 | 18 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 0 | 11 | 19 | 11 | 1 | 1 | 12 | 28 | 5 | 11 | 5 | 12 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 21 | 0 | 9 | 8 | 15 | 0 | 0 | 3 | 7 | 13 | 1 | 0 | 4 | 12 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 7 | 2 | 4 | 12 | 8 | 2 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 103 | 130 | 129 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 137 | 96 | 207 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 152 | 217 | 130 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 9 | 12 | 5 | 6 | 10 | 2 | 9 | 6 | 0 | 3 | 4 | 7 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 2 | 5 | 3 | 1 | 0 | 1 | 4 | 3 | 0 | 4 | 3 | 6 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 8 | 1 | 1 | 6 | 7 | 0 | 0 | 4 | 3 | 7 | 0 | 0 | 3 | 6 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 13 | 1 | 1 | 10 | 5 | 0 | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 55 | 68 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 53 | 62 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 79 | 95 | 45 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 13 (5.0%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 20 (7.69%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 10 | 5 | 4 | 6 | 20 | 1 | 5 | 7 | 0 | 4 | 2 | 7 | 0 | 7 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 2 | 1 | 4 | 7 | 1 | 1 | 9 | 11 | 0 | 3 | 3 | 4 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 12 | 0 | 1 | 6 | 12 | 0 | 0 | 3 | 5 | 6 | 0 | 0 | 4 | 4 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 7 | 0 | 1 | 3 | 3 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 70 | 62 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 62 | 57 | 99 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 88 | 116 | 52 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 24 (6.32%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 26 (6.84%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 17 (4.47%)
Leucine (Leu, L)
n = 55 (14.47%)
Isoleucine (Ile, I)
n = 43 (11.32%)
Methionine (Met, M)
n = 12 (3.16%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 30 (7.89%)
Tyrosine (Tyr, Y)
n = 16 (4.21%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.42%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 20 | 9 | 7 | 9 | 33 | 0 | 6 | 6 | 0 | 1 | 7 | 9 | 0 | 10 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 3 | 4 | 11 | 9 | 0 | 1 | 6 | 16 | 2 | 3 | 5 | 14 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 13 | 0 | 2 | 10 | 10 | 0 | 0 | 2 | 5 | 11 | 0 | 0 | 2 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 5 | 1 | 1 | 10 | 9 | 1 | 2 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 83 | 98 | 110 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 94 | 80 | 157 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 151 | 156 | 67 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.1%)
Alanine (Ala, A)
n = 24 (7.57%)
Serine (Ser, S)
n = 26 (8.2%)
Threonine (Thr, T)
n = 23 (7.26%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 9 (2.84%)
Leucine (Leu, L)
n = 56 (17.67%)
Isoleucine (Ile, I)
n = 28 (8.83%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 19 (5.99%)
Tyrosine (Tyr, Y)
n = 16 (5.05%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 12 (3.79%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 6 (1.89%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 11 | 19 | 6 | 9 | 26 | 1 | 13 | 6 | 0 | 3 | 3 | 2 | 1 | 7 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 3 | 13 | 7 | 1 | 2 | 6 | 5 | 0 | 4 | 9 | 9 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 12 | 0 | 2 | 7 | 14 | 0 | 0 | 3 | 3 | 13 | 0 | 1 | 4 | 8 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 11 | 1 | 1 | 2 | 6 | 0 | 0 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 82 | 93 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 92 | 59 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 111 | 144 | 56 | ||||||||||||
| ND2 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 19 (5.52%)
Serine (Ser, S)
n = 29 (8.43%)
Threonine (Thr, T)
n = 39 (11.34%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.91%)
Leucine (Leu, L)
n = 61 (17.73%)
Isoleucine (Ile, I)
n = 39 (11.34%)
Methionine (Met, M)
n = 24 (6.98%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 10 (2.91%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 20 (5.81%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 23 | 24 | 5 | 13 | 28 | 5 | 9 | 9 | 3 | 2 | 2 | 6 | 0 | 4 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 1 | 1 | 11 | 7 | 0 | 1 | 1 | 10 | 1 | 4 | 6 | 11 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 24 | 0 | 3 | 8 | 12 | 1 | 1 | 4 | 3 | 7 | 0 | 1 | 3 | 17 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 0 | 1 | 11 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 93 | 139 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 103 | 65 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 121 | 166 | 46 | ||||||||||||
| ND3 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 19 (5.52%)
Serine (Ser, S)
n = 29 (8.43%)
Threonine (Thr, T)
n = 39 (11.34%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.91%)
Leucine (Leu, L)
n = 61 (17.73%)
Isoleucine (Ile, I)
n = 39 (11.34%)
Methionine (Met, M)
n = 24 (6.98%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 10 (2.91%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 20 (5.81%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 23 | 24 | 5 | 13 | 28 | 5 | 9 | 9 | 3 | 2 | 2 | 6 | 0 | 4 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 1 | 1 | 11 | 7 | 0 | 1 | 1 | 10 | 1 | 4 | 6 | 11 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 24 | 0 | 3 | 8 | 12 | 1 | 1 | 4 | 3 | 7 | 0 | 1 | 3 | 17 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 0 | 1 | 11 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 93 | 139 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 103 | 65 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 121 | 166 | 46 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 43 (9.39%)
Threonine (Thr, T)
n = 47 (10.26%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 85 (18.56%)
Isoleucine (Ile, I)
n = 48 (10.48%)
Methionine (Met, M)
n = 34 (7.42%)
Proline (Pro, P)
n = 22 (4.8%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 22 (4.8%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 10 (2.18%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 26 | 28 | 8 | 19 | 36 | 5 | 17 | 10 | 2 | 3 | 4 | 4 | 0 | 5 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 3 | 7 | 9 | 11 | 1 | 3 | 5 | 9 | 0 | 4 | 7 | 11 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 29 | 1 | 6 | 11 | 15 | 0 | 4 | 7 | 5 | 8 | 4 | 0 | 4 | 18 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 9 | 0 | 1 | 2 | 12 | 1 | 1 | 1 | 6 | 1 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 121 | 175 | 95 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 129 | 82 | 195 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 148 | 206 | 84 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 12 (12.24%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 3 | 4 | 2 | 4 | 11 | 2 | 2 | 2 | 0 | 1 | 0 | 2 | 0 | 3 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 2 | 0 | 5 | 4 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 5 | 0 | 3 | 5 | 3 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 19 | 24 | 32 | 24 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 33 | 16 | 42 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 36 | 39 | 17 | ||||||||||||
| ND5 (size: 1833 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.1%)
Alanine (Ala, A)
n = 40 (6.56%)
Serine (Ser, S)
n = 56 (9.18%)
Threonine (Thr, T)
n = 53 (8.69%)
Cysteine (Cys, C)
n = 7 (1.15%)
Valine (Val, V)
n = 16 (2.62%)
Leucine (Leu, L)
n = 91 (14.92%)
Isoleucine (Ile, I)
n = 66 (10.82%)
Methionine (Met, M)
n = 39 (6.39%)
Proline (Pro, P)
n = 27 (4.43%)
Phenylalanine (Phe, F)
n = 41 (6.72%)
Tyrosine (Tyr, Y)
n = 17 (2.79%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 11 (1.8%)
Glutamic acid (Glu, E)
n = 11 (1.8%)
Asparagine (Asn, N)
n = 36 (5.9%)
Glutamine (Gln, Q)
n = 14 (2.3%)
Histidine (His, H)
n = 14 (2.3%)
Lysine (Lys, K)
n = 22 (3.61%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 43 | 33 | 8 | 17 | 49 | 1 | 15 | 14 | 0 | 6 | 1 | 8 | 1 | 13 | 28 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 7 | 6 | 21 | 13 | 0 | 2 | 9 | 13 | 1 | 3 | 10 | 14 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 25 | 1 | 5 | 13 | 24 | 0 | 3 | 11 | 5 | 12 | 2 | 1 | 12 | 24 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 2 | 2 | 9 | 22 | 0 | 1 | 2 | 7 | 0 | 0 | 0 | 1 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 103 | 140 | 230 | 138 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 70 | 162 | 126 | 253 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 233 | 259 | 104 | ||||||||||||
| ND6 (size: 517 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (15.79%)
Alanine (Ala, A)
n = 8 (4.68%)
Serine (Ser, S)
n = 9 (5.26%)
Threonine (Thr, T)
n = 7 (4.09%)
Cysteine (Cys, C)
n = 4 (2.34%)
Valine (Val, V)
n = 13 (7.6%)
Leucine (Leu, L)
n = 29 (16.96%)
Isoleucine (Ile, I)
n = 13 (7.6%)
Methionine (Met, M)
n = 13 (7.6%)
Proline (Pro, P)
n = 3 (1.75%)
Phenylalanine (Phe, F)
n = 14 (8.19%)
Tyrosine (Tyr, Y)
n = 8 (4.68%)
Tryptophan (Trp, W)
n = 5 (2.92%)
Aspartic acid (Asp, D)
n = 5 (2.92%)
Glutamic acid (Glu, E)
n = 8 (4.68%)
Asparagine (Asn, N)
n = 3 (1.75%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.17%)
Arginine (Arg, R)
n = 1 (0.58%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 1 | 2 | 3 | 0 | 0 | 2 | 8 | 0 | 0 | 8 | 0 | 3 | 2 | 14 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 11 | 4 | 0 | 5 | 0 | 0 | 3 | 11 | 2 | 0 | 14 | 2 | 0 | 0 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 1 | 0 | 0 | 3 | 4 | 1 | 7 | 1 | 5 | 16 | 3 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 5 | 5 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 9 | 43 | 59 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 22 | 26 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 5 | 18 | 84 | ||||||||||||
| Total protein-coding genes (size: 11405 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 212 (5.58%)
Alanine (Ala, A)
n = 240 (6.32%)
Serine (Ser, S)
n = 301 (7.92%)
Threonine (Thr, T)
n = 323 (8.5%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 159 (4.19%)
Leucine (Leu, L)
n = 593 (15.61%)
Isoleucine (Ile, I)
n = 369 (9.71%)
Methionine (Met, M)
n = 224 (5.9%)
Proline (Pro, P)
n = 197 (5.19%)
Phenylalanine (Phe, F)
n = 237 (6.24%)
Tyrosine (Tyr, Y)
n = 129 (3.4%)
Tryptophan (Trp, W)
n = 105 (2.76%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 94 (2.47%)
Asparagine (Asn, N)
n = 165 (4.34%)
Glutamine (Gln, Q)
n = 85 (2.24%)
Histidine (His, H)
n = 98 (2.58%)
Lysine (Lys, K)
n = 97 (2.55%)
Arginine (Arg, R)
n = 65 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 187 | 182 | 180 | 74 | 99 | 260 | 26 | 114 | 79 | 6 | 43 | 28 | 83 | 5 | 99 | 138 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 44 | 8 | 21 | 46 | 107 | 79 | 8 | 24 | 60 | 103 | 25 | 47 | 53 | 95 | 2 | 47 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 97 | 175 | 4 | 38 | 79 | 123 | 5 | 13 | 43 | 46 | 83 | 13 | 20 | 46 | 119 | 36 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 62 | 81 | 13 | 18 | 52 | 90 | 7 | 8 | 14 | 40 | 3 | 0 | 0 | 8 | 0 | 92 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 775 | 904 | 1234 | 887 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 467 | 1005 | 746 | 1582 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 181 | 1237 | 1602 | 780 | ||||||||||||
>NC_014858.1 Rattus lutreolus mitochondrion, complete genome GTTAATGTAGCTTATAATAAAGCAAAGCACTGAAAATGCTTAGATGGATTACCAAAAATCCCATAAACAC AAAGGTTTGGTCCTGGCCTTATAATTAATTGGAGGTAAGATTACACATGCAAACATCCATAAACCGGTGT AAAATCCCTTAAACATTTACTCAAAAATTAAGGAGAGGGCATCAAGCACATAACACAATATAGCTCAAAA CGCCTTGCCTAGCCACACCCCCACGGGACTCAGCAGTGATAAATATTAAGCAATAAACGAAAGTTTGACT AAGCTATACCTCTCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAATT ATTTTCGGCGTAAAACGTGCCAACTATAGACTACACAATAGAACTAAAATCCAACTTATATGTGAAAATT CATTGTTAGGACCCAAAAATCAACAACGAAAGTAATTCTAACTGTTAATACAACGCACGATAGCTAGGAC CCAAACTGGGATTAGATACCCCACTATGCCTAGCCCTAAACCTTAATAATTACACATACAAAAATATTTG CCAGAGAACTACTAGCCACAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATACCCATCTAGAGGAGCC TGTTCTATAATCGATAAACCCCGTTCTACCTTACCACTTCTTGCTAATTCAGCCTATATACCGCCATCTT CAGCAAACCCTAAAAAGGCACCAAAGTAAGCACAATAACAAACATAAAAACGTTAGGTCAAGGTGTAGCC AATGAAGTGGAAAGAAATGGGCTACATTTTCTTTCCAAAGAACATTACGAATCCCTTTATGAAACTAAAG GACAAAGGAGGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATAGCGCAATGAAGTACGCACAC ACCGCCCGTCACCCTCCTCAAATTAAATTAACACGTACCTATACATAATTTTACCAACAAATTTATGAGA GGAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAATAATCACAGTGTAGCTTAAATAC AAAGCATCTGGCCTACACCCAGAAGAATTCATAAAAATGAACACTTTGAACTAACCCTAGCCCTAAAACC AATTGACATAACTAAATCACTATATAAATTAAACCATTTAACTTAAAAAGTATCGGAGAAAGAAATTTAC CACCAGGCGCTATAGAGAAAGTACCGTAAGGGAATGATGAAAGATTAGTCCAAAGTAAAAACAAGCAAAG ATTAAACCTTGTACCTTTTGCATAATGAGTTAACTAGAAAAACCTTAACAAAAAGAATTTAAGCTAAAAA CCCCGAAACCAAACGAGCTACCTAAAAACAATTTCATGAATCAACCCGTCTATGTAGCAAAATAGTGGGA AGATTTTTAGGTAGAGGTGAAAAGCCTACCGAGCTTGGTGATAGCTGGTTGCCCAAAAAAGAATTTCAGT TCAACTTTAAGCTTACCATAAGAATAGCAAATCAAAATGTAAACTTAAAATATAGCCAAAAGAGGGACAG CTCTTTAGGTAAGGAAAAAGCCTTAAATAGTGAATAAATAACTTATAACTAACTTAACCATTGTAGGCCT AAAAGCAGCCATCAATAAAGAAAGCGTTCAAGCTCAACATACCCATACATGAATTAATCCCACAAATCCC AATAAATTCCTATACTACAAATTGGGCTAATCTATAAACCCATAGATGAAATACTGTTAATATGAGTAAC AAGAACTATTTCTCCTAGCACAAGTGTATGACAACCCGGATAACCATTGTCAATTATCGAACCACAGGTA CTAACCCCACAATAAAACTACCTAATATTAACTCGTTAACCCAACACAGGTGTGCTTTAAGGAAAGATTA AAAAAAGTAAAAGGAACTCGGCAAACACGAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATAACA AGTATTAGAGGCATTGCCTGCCCAGTGACTGAAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAG CATAATCACTTGTTCCTTAATTAGGGACTAGAATGAATGGCTAAACGAGGGTTCAACTGTCTCTTACTTT CAATCAGTGAAATTGACCTTCCAGTGAAGAGGCTGGAATATCACAATAAGACGAGAAGACCCTATGGAGC TTTAATTTACTAGTTTAACTTATGCATAATAACCTAATGGACCAAAACAAAATAAGCATAAACTAAAAAT TTCGGTTGGGGTGACCTCGGAGAACAAAAAATCCTCCGAACGATTTTAACCTAGACCAACAAGTCAAAGT AACACTAATATCCAATTGACCCAATTATTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCC TATTTAAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCA GAAGCTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCC AGGTCGGTTTCTATCTATTCACAATTTCTCCCAGTACGAAAGGACAAGAGAAATAGAGCCCCCTTATCAC AAGTGCTCTCAACCAATTTATGAAAGAAATCTCAACAAAATATGTATGTCCAACAAACAGACCTAGATCA GGTTATTAGGGTGGCAGAGCCAGGCAATTGCGTAAGACTTAAAACCTTCTTCCCAGAGGTTCAAATCCTC TCCCTAATAATGTACTTTATTAATATCCTGACACTTCTAATTCCAATCCTAATTGCCATAGCCTTCCTCA CCCTAGTGGAACGAAAAATTTTAGGTTACATACAATTACGCAAAGGCCCCAACATCGTCGGTCCATACGG CATTCTACAACCATTTGCAGATGCCATAAAACTATTTATAAAAGAACCTATACGCCCCTTAACTACCTCA ATATCACTATTCATCATTGCACCAACCCTCTCCCTCACATTAGCCCTAAGCCTATGAATTCCTCTACCAA TACCCCACCCCCTCATCAACCTTAACTTAGGCATACTATTTATTCTAGCTACCTCAAGCCTTTCAGTTTA CTCCATTTTATGATCAGGCTGAGCATCAAATTCAAAATACTCCCTATTCGGAGCCCTACGAGCCGTTGCC CAAACCATCTCTTACGAAGTCACAATAGCCATCATCCTTTTATCCGTACTCCTAATAAGCGGCTCATTCT CCCTACAAATACTTATTACTACACAAGAACATACCTGACTATTAATACCTGCCTGACCAATAGCCATAAT ATGATATATTTCAACCCTAGCAGAAACAAACCGAGCCCCCTTCGACCTCACAGAAGGAGAGTCAGAACTA GTTTCAGGCTTCAACGTCGAATACGCCGCAGGACCATTCGCCCTATTTTTCATAGCTGAATACACTAACA TTATCTTAATAAATGCTTTGACATCAATTGTATTCCTAGGACCCTTATACTACATCAACCACCCTGAATT ATACTCAATTAACTTCATAACAGAAACATTACTACTATCCACAACCTTCCTATGAATTCGAGCATCCTAC CCCCGCTTTCGATATGACCAACTAATGCACCTCCTATGAAAAAATTTCCTCCCCTTAACACTAGCACTCT GCATATGATATATTTCTCTTCCAATTTTTTCAGCGGGAATCCCACCCTACACATAGAAATATGTCTGACA AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTAAACCCTCTTATTTCTAGGATAATAGGAATTGAA CCTACACTTAAGAATTCAAAATTCTTCGTGCTACCAATACACCCCATCCTATGCAGTAAGGTCAGCTAAC TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTCTAAACCCTTCCCGTACTAATTAACCCTATCACCCT TATCATCATCTACTTCACCATTTTCATAGGACCCACAATCACAATATCTAGTTCCAACTTACTCCTAATA TGAGTTGGATTAGAAGTAAGCCTCTTAGCCATTGTTCCTCTACTAACTAACAAGAAAACCCCACGATCAA CCGAAGCAGCAACAAAATACTTTCTCACACAAGCTACAGCCTCGATAATTATATTACTAGCCATTATCCT TAACTTCAAACAATCAGGAGTATGAGTATTTCAGCAACAAACCAACAGCATACTACTCAACATAACACTC ATTTCACTAGCCATAAAACTTGGATTAGCCCCATTCCACTACTGACTGCCCGAAGTCACCCAAGGAATTC CCATACACATTGGACTGATCCTACTGACATGACAAAAAATCGCCCCACTATCAATCCTATATCAAATCCA TCAGCTGCTAAATCCAACTATCACAACCATTCTTGCAATTACATCAGTCTTTATCGGTGCCTGAGGAGGA CTAAACCAAACACAAACACGAAAAATTATAGCATACTCATCAATTGCCCACATAGGGTGAATAGTAGCAA TCCTCCCATACAACCCCAACCTAACACTCCTAAATCTAATAATCTACATCCTATTGACCATCCCAATATT CATCTCCCTCATAACAGACTCAGCAACAACAATCAACTCATTCTCACTAGCATGAAACAAAACCCCCATA ATTCTAGCCATAACATCCATCATCCTCCTATCCATAGGAGGCCTCCCCCCTCTCACAGGATTCTTACCAA AATGAACAATTATCTCAGAACTCCTAAAAAATAACTGCTCTATCCTGCCAACACTAATAGCCATAATAGC CCTATTAAACTTATTCTTTTACACACGACTAATTTATTCCGTATCTCTCACCATATTCCCAACCAACAAC AACTCCAAAATAATTTCCCACCACACAAACCTAAAATATAGCCCTATCCTACCAACACTAACAGTATTAA GCACCCTAACCCTACCACTTTCATCCCAGCTAATAACATAGAAGTTTAGGATATAATAAAGTCCAAGAGC CTTCAAAGCCCTTAGAAAACAAACAAGTTTAACTTCTGAATAAGGACTGTAAGACTATACCCTACATCTA TTGAATGCAAATCAATTGCTTTAATTAAGCTAAGACCTTAACTAGATTGGAAGGATTCAAACCTACGAAA ATTTAGTTAACAGCTAAATACCCTATTTACTGGCTTCAATCTACTTCTCCCGCCTATCAGAAAAGAGGCG GGAGAAGCCTTAGTAGAGGGGATCTCTACACCTTCGAATTTGCAATTCGACATGACAATCACCTTAAGGC TTCCTGGTAAAAAGGGGATTTAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCATTTTACC TATGTTCGTAAACCGTTGACTATTTTCAACCAACCACAAAGATATTGGGACCCTCTATTTATTATTTGGC GCTTGAGCAGGAATAGTAGGAACAGCCTTAAGCATTTTAATTCGAGCTGAATTAGGACAACCAGGCGCAC TCCTAGGCGACGACCAAATCTATAACGTTATCGTCACAGCCCATGCATTCGTAATAATTTTCTTTATAGT TATACCAATAATAATCGGAGGGTTCGGAAACTGACTTGTACCACTGATAATTGGAGCCCCTGACATGGCA TTCCCACGAATAAACAACATAAGCTTTTGATTACTTCCTCCATCATTTCTTCTTCTCCTAGCATCCTCCA TAGTAGAAGCCGGAGCAGGAACAGGATGGACAGTATACCCCCCTTTAGCCGGGAATCTAGCCCACGCCGG AGCATCTGTAGACTTAACTATTTTCTCCCTTCACCTAGCCGGAGTATCCTCTATCTTAGGAGCTATTAAC TTTATTACAACTATTATTAATATAAAACCCCCTGCCATAACCCAATACCAAACACCTCTCTTTGTATGAT CCGTATTAATTACAGCCGTTCTATTACTTCTCTCACTACCAGTATTAGCAGCGGGCATTACTATACTTCT CACAGACCGAAACCTAAATACTACTTTCTTTGATCCTGCTGGAGGAGGAGACCCTATCCTATATCAACAT CTATTCTGATTCTTTGGCCACCCAGAAGTCTATATCCTTATCCTCCCAGGATTTGGAATTATTTCACACG TAGTTACCTACTATTCTGGAAAAAAAGAGCCATTCGGATACATAGGAATAGTTTGAGCCATGATATCTAT TGGCTTCCTAGGATTTATCGTATGAGCACATCATATATTTACAGTAGGCCTAGACGTAGACACACGAGCC TACTTTACATCTGCCACTATAATTATCGCTATTCCCACAGGCGTTAAGGTATTCAGCTGACTTGCTACCT TACATGGAGGCAATATCAAATGATCCCCCGCTATACTATGAGCCTTAGGGTTTATTTTCTTATTTACAGT AGGAGGCCTAACTGGAATCGTCCTATCTAACTCATCACTTGACATTGTACTTCATGACACATACTATGTA GTAGCCCATTTCCACTATGTACTGTCTATAGGAGCAGTATTCGCCATTATAGCTGGCTTCGTTCACTGAT TCCCACTATTCTCAGGATACACCCTAGATGACACATGAGCTAAAGCCCATTTCGCCATCATATTCGTAGG TGTTAACATAACATTTTTCCCTCAACACTTCCTAGGATTATCAGGGATACCTCGCCGATACTCCGACTAC CCAGATGCTTACACCACATGAAACACAATCTCATCAATAGGCTCATTCATCTCACTTACAGCTGTCCTTG TTATAATCTTTATAATTTGAGAAGCCTTTGCATCAAAACGAGAAGTACTTTCAGTTTCTTACTCTTCAAC AAACCTAGAATGACTTCACGGATGTCCCCCACCTTACCACACATTCGAAGAGCCTTCCTACGTTAAAGTT AAGTAAGAAAGGAAGGATTCGAACCCCCTACAACTGGTTTCAAGCCAATCTCATAACCACTATGTCTTTC TCAATGAGATATTAGTAAAACAATTACATAACTTTGTCAAGGTTAAATTATAGACTTAAATCTATATATC TTACATGGCTTACCCTTTCCAACTTGGCTTACAAGACGCCACATCACCTATCATGGAAGAGCTTATAAAC TTCCACGACCATACCCTAATAATTGTTTTTCTCATTAGCTCCCTAGTACTCTATATCATTTCACTAATAT TAACAACAAAATTAACACATACTAGCACGATAGACGCCCAAGAAGTAGAAACAATTTGAACAATCCTCCC AGCTGTCATCCTTATTCTGATTGCTCTCCCCTCCCTACGAATTTTATATATAATAGACGAAATCAATAAC CCAGTTTTAACCGTAAAAACCATGGGACACCAATGATACTGAAGCTACGAATACACCGACTATGAAGACC TATGCTTTGACTCCTACATAATCCCAACCAACGACTTAAAACCGGGCGAACTCCGCCTACTAGAAGTTGA CAACCGAGTAGTCCTACCAATAGAACTCCCAATTCGTATATTAATCTCATCCGAAGACGTCTTACATTCC TGAGCTGTCCCTTCACTAGGATTAAAAACCGATGCAATCCCAGGCCGCCTTAATCAAGCCACAGTAACAT CAAACCGGCCTGGCCTGTTTTACGGTCAATGCTCCGAAATCTGTGGATCAAATCACAGCTTCATACCCAT TGTACTAGAAATAGTACCCCTTAAATACTTCGAAAACTGATCAGCTTCTATAATTTAAATTCATTGCGAA GCTTAGAGCGTTAACCTTTTAAGTTAAAGTTAGAGACCAGAAATCTCCACAATGATATGCCACAACTAGA CACATCCACATGATTTATTACTATCATCTCCTCGATAATTACATTATTTATTCTATTTCAACTAAAAATC TCTTCCCAAACCTTCCCTGCAACCCCCTCACCCAAAATCATAGCCACAGAAAAATCAAATAACCCTTGAG AATTAAAATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACAGTAATAGGCCTTCCAATTGTCGTA ACCATTATTATATTCCCATCAATTCTATTCCCATCATCAGAGCGCCTGATTACCAACCGCCTACACTCAT TTCAACACTGGCTAATCAAACTTATCATCAAACAAATAATATTAATCCATACACCAAAAGGACGAACCTG AACACTGATAATTGTATCACTAATTATATTTATTGGCTCAACTAACCTCTTAGGCCTACTTCCTCACACA TTCACCCCTACCACCCAACTGTCCATAAACCTAAGCATAGCCATCCCTCTATGAGCAGGAGCCGTAATTT TAGGGTTCCGACACAAACTAAAAAATTCTTTAGCCCATTTCCTACCACAAGGAACACCCATTTCACTCAT TCCTATACTAATTATCATTGAAACCATCAGCTTATTCATTCAACCAATAGCACTAGCAGTACGACTAACA GCAAACATCACAGCAGGCCACCTATTAATACACCTAATTGGAGGAGCTACTTTAGTACTCATGAACATCA GCCCACCAACCGCCACAATCACATTTATTATTCTTCTTCTACTTACAGTACTTGAATTTGCCGTAGCCTT AATTCAAGCCTATGTATTTACTCTCCTAGTAAGCCTGTACCTACATGATAACACATAATGGCCCACCAAA CCCACGCATACCACATAGTAAATCCAAGCCCATGACCACTAACAGGAGCACTATCAGCCCTTCTACTCAC ATCCGGCCTAGTAATGTGATTCCATTACAACTCCACAATTCTCCTTTCACTAGGCCTACTAACAAATATC CTAACCATGTACCAATGATGACGAGACATTATCCGTGAAGGAACATTCCAAGGCCACCACACCCCTATTG TACAAAAAGGCCTACGATACGGAATAATCCTATTCATCATCTCCGAAGTATTCTTCTTTTCCGGATTCTT TTGAGCATTTTATCATTCCAGCCTAGTCCCCACCCATGACCTAGGCGGTTGCTGACCTCCAACAGGAATT ACCCCCTTAAATCCCCTAGAAGTCCCTCTTCTAAACACATCAGTTCTCCTGGCATCAGGAGTTTCAATTA CATGAGCCCATCACAGCCTCATAGAAGGCAACCGAAATCACATAAACCAAGCCTTACTAATCACTATTCT CCTAGGATTATATTTCACCATCCTTCAAGCTTCAGAATATTTCGAAACATCATTTTCCATCTCAGACGGA ATTTACGGCTCAACATTCTTCATAGCAACAGGATTCCATGGCCTACATGTAATTATCGGCTCAACTTTCC TCATTATCTGCTTATTACGACAACTAAAATTTCACTTCACATCAAAACATCATTTTGGATTTGAAGCGGC AGCATGATACTGACACTTCGTAGATGTAGTTTGACTATTCCTATATGTTTCTATTTATTGATGAGGATCA TACTCCCTTAGTATAAAAATTATAACTGACTTCCAATCAGTAGATTCTGAAAAAATTCAGAAGAGAGTAA TTAATCTATTTATCATTATTATAATTAATATTACCCTATCTTTTATCCTTATTACAATCGCATTCTGATT ACCTCAAATAAATCTCTATTCCGAAAAAGCAAACCCATACGAATGTGGATTTGACCCAACAAGTTCTGCG CGCCTCCCTTTTTCAATAAAATTTTTCTTAGTGGCTATTACATTCCTTCTGTTCGACCTAGAAATCGCCC TCCTACTCCCCCTCCCATGAGCAGTACAAACAACTAACATTACCACAATAACAACAACCGCCTTTATCCT AATTACTATCTTAGCTCTTGGCCTAAGCTACGAATGAACACAAAAAGGACTAGAATGAACAGAATAACTG GTAATTAGTTTAAACAAAATTAATGATTTCGACTCATTAGATTATGATAACAATCATAATTACCAATAAT GACATCTGCCTTCCTAAATTTAACCCTAGCCTTTACATTATCTCTCCTAGGTACCCTTATGTTTCGTTCT CACCTGATATCCACCCTCCTTTGCCTAGAAGGAATGATGCTATCCCTATTCATTATAACCTCAACATCCA CACTAAACTCAAACTCCATAGCCTCCATAACCATTCCAATCACCATCCTAGTTTTTGCAGCCTGTGAAGC AGCAGTAGGCCTAGCCCTACTAGCAAAAATCTCAAACACTTACGGGACAGATTACGTACAAAACCTCAAC CTCCTGCAATGCTAAAAATTATTTTCCCTTCACTCATGCTCCTTCCACTAACATGGCTCTCAACCAACAA AAAAGTCTGAACTAACGTCACCTCCTACAGCTTTCTAGTAAGCCTAACAAGTCTATCACTACTATGACAA AATAACGAAAACTACCTAAATTTCTCAACTACATTCTCTTCCGATCCTCTATCCACCCCCCTAATCATTT TAACAGCCTGATTACTCCCACTGATAATTCTCGCTAGTCAAAACCATATAAAAAAAGAAACTCCCACACA TCAAAAACTTTATATCTCAATACTCATTAGCCTTCAAACCTTACTTATCATAACATTTTCCACAACAGAA CTTATCTTATTTTATATCCTATTCGAAGCCACTCTAATTCCAACATTAATTATCATTACCCGATGGGGCA ACCAAACGGAACGTCTCAACGCAGGCATTTATTTCCTATTTTACACATTAATTGGTTCTATCCCACTTTT AATCGCCCTACTCTCAATTCAGAACTCTATAGGAACCCTCAACTTCCTTATCCTCTCCCTCACAACACAG CCTTTATCCTCAACATGGTCCAACAACATCATATGACTAGCATGCATAATAGCATTCATAGTTAAAATAC CATTATATGGTGTACACCTGTGGCTACCAAAAGCCCACGTAGAAGCTCCAATTGCAGGATCCATAATCCT AGCAGCGATCCTACTAAAACTAGGAGGCTACGGAATAATACGAGTCTCTATCATCCTAGACCCTCTAACA AAATCCCTAGCCTACCCATTCATTATACTCTCCCTATGAGGAATAATCATAACTAGCTCAATCTGCCTGC GCCAAACAGACCTAAAATCATTAATTGCTTACTCATCAGTAAGTCATATGGCCTTAGTTATCACAGCCAT TATGATTCAAACACCATGAAGTTTCATAGGAGCTACCATATTAATAATCGCACACGGCCTAACCTCATCA CTCCTATTCTGCCTAGCAAACACCAACTACGAACGGATCCACAGCCGAACTATAATTATAGCTCGAGGAT TACAAACAATTTTTCCACTGATAGCAACATGATGACTACTAGCAAGCCTAGCTAACTTAGCCCTACCACC CCTAATTAACCTCATAGGAGAACTATTCATCGTTATAGCAACATTCTCTTGATCAAATCCCTCTATCATC CTCACAGCAACAAACATTGTCATCACAGGAATGTATTCAATGTACATAATTATTACAACCCAACGAGGTA AGTTAACTAGCCATATAAATAACCTTCAACCCTCCCACACACGAGAATTAACACTCATAGCCCTCCACAT CATCCCCCTCCTACTATTAACAGCTAACCCCAAACTCATCACAGGCCTGACAATATGTAGATATAGTTTA CAAAAAACATTAGACTGTGAATCTAATAACAGGAAATTATATTCCTTATTTACCAAGAAAGTATGCAAGA ACTGCTAATTCGCGCGCCCATACCTAAACATATGGCTTTCTTACTTTTATAGGATAGAAGCAATCCTTTG GTCTTAGGAACCAAAAACTTTGGTGCAACTCCAAATTAAAGTAATAAATATAATAACATCCGCAATCCTC ATAATTTTAGTTTTACTCACAGCACCAATCATTATCTCTATAACCAACCTACCCAAACTCATGGACTTCC CATCATATGCTACCTCATCAATCAAATTCTCATTTTTCCTCAGCCTACTACCCTTATTATTATTTTTTCA CTACAATACAGAGTACATAATCACTAACTGACACTGACTAACCATCAACTCTATCAATCTAAGCATAAGC TTCAAAATTGACTACTTCTCAATCCTATTCCTATCAGTAGCCTTATTCGTAACATGATCAATCATACAAT TCTCCTCATGATACATACATTCCGACCCCCACATTAACCGATTCATTAAATACTTAATACTATTCCTAAT TACTATACTAATCCTAACCTCAGCTAACAATCTATTCCAACTCTTCATCGGATGAGAAGGAGTAGGGATT ATATCCTTCCTACTAATCGGATGATGGTACGGCCGTGCAGACGCCAACACAGCAGCCCTCCAAGCAATCC TATACAACCGAGTAGGCGACATTGGCTTTATCCTAGCTATGACCTGGTTCTGCCTAAATACAAACTCTTG AGAACTCCAACAAATCTTCCTAGCCAATAACAGCAACCTGGTACCCCTCATAGGACTCCTAATTGCAGCT ACAGGAAAATCTGCCCAATTTGGTCTCCACCCATGACTCCCATCAGCCATAGAAGGCCCAACTCCTGTGT CCGCCCTATTGCACTCAAGCACTATAGTTGTCGCAGGAATCTTCCTAATAATCCGATTTCATCCACTAAC CTCAAACAACAGTACTATCATGACAGCCATACTATGCCTTGGAGCCATCACTACACTATTTACAGCAATC TGCGCACTCACCCAAAACGATATTAAAAAAATTGTAGCCTTTTCTACATCCAGCCAACTAGGCCTTATAA TAGTTACACTAGGAATTAACCAACCCTACCTAGCTTTCCTCCACATCTGCACCCACGCATTCTTCAAAGC CATATTATTCATATGCTCCGGATCAATCATTCACAGCCTAAATGACGAACAAGACATTCGAAAAATAGGT AGTATTATAAAAGTAATGCCATTTACATCATCCTGCCTTATCATCGGAAGCCTAGCCTTAACCGGAATAC CTTTCCTCACAGGCTTCTACTCCAAAGACCTCATCATCGAAGCCATCAGCACGTGCAATACCAACGCCTG AGCCCTAATAGTTACCTTAATCGCCACATCCATAACTGCTATATATAGTATACGAATTATCTACTTCGTT ACTATGACAAAACCACGCTACTCCCCACTAATTACCATCAACGAAAACAACCCAAACCTCATTAATCCTA TTAAACGCTTAGCATTAGGAAGCATTATAGCAGGCTTTCTTATCTCACTAAACATCCCCCCAACTAACAT CCAAGTTCTTACAATACCCTGATATCTAAAAATAACAGCCCTATTCATCACAATCCTAGGCTTCGCCATC GCCCTAGAACTCAACAACTCAACCCTAAATTTATTACCAACAAAAGAAGCCACCCGACCCTCACTATTCT CAACATCACTAGGCTATTTCCCATCAATCGTACATCGAGCAATCCCCCAAAAAACACTAAATACCAGCTA TAAAATGTCCCTAAACCTTCTAGACCTAATCTGACTAGAAAAAACAATTCCAAAATCAACCTCAATCACC CACACTCATCTATCCAAAATAATAGCCGATCAAAAAGGACTAATCAAACTATACTTCCTATCATTTCTTA TTACAATCTCACTAATCTTTATTTTACATACACTTAATCCCGAGTGATTTCAATAATAATAAAAATCCCC GCAAATAACGACCACCCAGCTACCACCATCATCCAAGTAGCACAGCTATACATACCCGCAACCCCAATAC CACCTTCCAGCATCACCCCAACATCATCAACCTCATACATCAACCAATCCCCCAGACTATTAAAATCAAC TAACTCAATCTTACCACTCAAGCCAAGCAAATAAAACATCAACAACTCCATAAAAAGACCCAAAACAAAA AACCCTAAAATAAACCAATTAGAGCCCCAAGTCTCCGGATATTCCTCAGTAGCTATAGCAGTTGTGTACC CAAATACAACCAACATCCCACCCAAATAAATTAAAAATACTATCAAACCTAAAAACGAACCCCCAAAACC TAAAACCATCAAACACCCAATACACCCACTAACAATCAAACCAAGCCCCCCATAAATAGGCGAAGGCTTC AACGCCAACCCCAAACAACCAGCCAAAAACAATAAACTTAAAATAAACATATAATTTGTCATCATTTCTA CACAGCATTTAACTGCGACCAATGACATGAAAAATCATCGTTGTAATTCAACTATAGAAACACCTAATGA CAAACATTCGAAAATCCCACCCCCTACTCAAAATCATCAACCACTCCTTCATTGACCTTCCCGCCCCATC CAACATTTCATCATGATGAAACTTCGGCTCTCTCCTAGGAGTCTGCCTCATAATTCAAATCATCACAGGC CTATTCCTAGCAATACACTATACATCCGACACTACAACAGCATTCTCATCAGTCACCCATATCTGCCGAG ATGTAAACTACGGCTGACTAATTCGATACTTACATGCTAACGGAGCTTCCATATTCTTCATCTGCCTTTA CCTCCACGTAGGACGAGGAATGTACTACGGATCCTACACCTTCCTAGAAACATGAAACATTGGAATTATT CTACTATTTGCAGTTATAGCAACCGCATTCATAGGCTATGTACTTCCATGAGGACAAATATCTTTCTGAG GGGCCACAGTAATTACAAACCTACTATCAGCTATTCCTTATATCGGAACCACCCTAGTCGAATGAATCTG AGGAGGCTTCTCAGTAGACAAAGCAACTTTAACCCGTTTTTTCGCCTTCCACTTCATTCTCCCATTTATC ATTGCCGCTCTTGCAATTGTCCATCTACTTTTTCTTCACGAAACAGGATCAAACAACCCCACAGGATTAG ACTCCAACGCAGACAAAATCCCATTCCACCCATATTACACAATTAAAGACCTCCTAGGAGTATTTATGCT ATTTCTATTTTTAATAACCCTAGTACTATTCTTCCCAGACCTACTAGGAGACCCAGACAACTACACACCT GCCAACCCCCTAAATACCCCACCACACATCAAGCCAGAATGATACTTTCTATTCGCCTACGCCATCCTAC GTTCCATCCCCAACAAACTAGGAGGAGTCGTAGCCCTAGTCCTATCAATTCTCATCCTAGCCTTTCTACC ATTCTTACACACCTCAAAACAACGCAGCCTAACCTTTCGCCCTATCACTCAAATTCTATACTGAATTTTA GCAGCCAACCTCCTCATTCTAACATGAATTGGGGGCCAACCAGTAGAACACCCATTCATCATCATTGGTC AACTAGCCTCCATCAGCTATTTCTCAATCATCCTTGTCCTAATACCAATTTCCGGAATTATTGAGGACAA AATACTAAAATGAAATTAATCGTCCCGATAGTATAAAAATTACCCTGGTCTTGTAAACCAAAAATGAAGA ATCAATCTTCTCAGGACATCCCATCAAGAAGAAGGAAGCAACCCTCACCATCAACACCCAAAGCTGATAT TCTTATTAAACTACTTCTTGGCAGTACATAAAATGATATAGGACATAGGACATTAATGTATATCGTACAT TAAATTCTTTTCCCCATGCATATAAGCAATGTAAATTTTAATTAATGTATTAAGACATAATATTTAAGTC AATTTAAACTTTATAATAACATGAATATTCTTGAGTACATTATAATAATGCTTTCCGGACATATCTGTGT TATTAGACATACACCATAGAATCATAAACCTTTCTTTTCCATATGACTATCCCTAACCCCAGTTTGTCTA TATTTCTACCATCCTCCGTGAAATCAACAACCCGCCCACCAGTCCCCCTCTTCTCGCTCCGGGCCCATAC AACTTGGGGGTCGCTATCCTGGAACTTTATCAGACATCTGGTTCTTACTTCAGGGTCATAAATGGTTTAT CGTCCATACGTTCCCCTTAAATAAGACATCTCGATGGTACGGGTCTACCCACCGTGACCAACATAATTAT AAATCTCATACATTTGGTATTTTTTAATTTTCGGATGCCTTCAGTCAACATAGCCGTCAAGGCATGAAGG TCAGCCCAAAGTCCCGGCGAACCTCTTAATTAAGAGTCATTTATCCCCATAAACAAAGCCCTAAAGGCTA TATATCCATGTTTGTAAGACATACAAATTTACCAAAACTGAAAAAACTATCAACCAACAAACCCCCCCCA CCCCCCAACTTTAATGCCAAACCCCAAAAACATTAAAGAAGCCAAAAATTCTTGATTCTTAAAAGATCCC TTTTCATTCTAATGGACCACAGAATTTTGACCTAAATTCTAGTATTAGTAAAATTTTCCCACACAAACTT TACCTAACCAAAACCCCTCTTCCCCGCCCAACCCTAGAGAAATTTACCACACACA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions