Viewing data for Pseudomys chapmani
| Scientific name | Pseudomys chapmani |
| Common name | Western pebble-mound mouse |
| Maximum lifespan | 6.80 years (Pseudomys chapmani@AnAge) |
| Total mtDNA (size: 16249 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5856 | 10391 | 3925 | 1931 | 4538 | 5853 |
| Base content per 1 kb (bases) | 360 | 639 | 242 | 119 | 279 | 360 |
| Base content (%) | 36.0% | 63.9% | ||||
| Total protein-coding genes (size: 11328 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4138 | 7190 | 2924 | 1214 | 3229 | 3961 |
| Base content per 1 kb (bases) | 365 | 635 | 258 | 107 | 285 | 350 |
| Base content (%) | 36.5% | 63.5% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1493 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 490 | 1003 | 282 | 208 | 438 | 565 |
| Base content per 1 kb (bases) | 328 | 672 | 189 | 139 | 293 | 378 |
| Base content (%) | 32.8% | 67.2% | ||||
| Total rRNA-coding genes (size: 2517 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 904 | 1612 | 500 | 404 | 624 | 988 |
| Base content per 1 kb (bases) | 359 | 640 | 199 | 161 | 248 | 393 |
| Base content (%) | 35.9% | 64.0% | ||||
| 12S rRNA gene (size: 953 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 353 | 600 | 197 | 156 | 230 | 370 |
| Base content per 1 kb (bases) | 370 | 630 | 207 | 164 | 241 | 388 |
| Base content (%) | 37.0% | 63.0% | ||||
| 16S rRNA gene (size: 1564 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 551 | 1012 | 303 | 248 | 394 | 618 |
| Base content per 1 kb (bases) | 352 | 647 | 194 | 159 | 252 | 395 |
| Base content (%) | 35.2% | 64.7% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 239 | 442 | 170 | 69 | 214 | 228 |
| Base content per 1 kb (bases) | 351 | 649 | 250 | 101 | 314 | 335 |
| Base content (%) | 35.1% | 64.9% | ||||
| ATP8 (size: 192 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 58 | 134 | 48 | 10 | 55 | 79 |
| Base content per 1 kb (bases) | 302 | 698 | 250 | 52 | 286 | 411 |
| Base content (%) | 30.2% | 69.8% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 610 | 935 | 372 | 238 | 460 | 475 |
| Base content per 1 kb (bases) | 395 | 605 | 241 | 154 | 298 | 307 |
| Base content (%) | 39.5% | 60.5% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 248 | 436 | 160 | 88 | 195 | 241 |
| Base content per 1 kb (bases) | 363 | 637 | 234 | 129 | 285 | 352 |
| Base content (%) | 36.3% | 63.7% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 300 | 484 | 192 | 108 | 238 | 246 |
| Base content per 1 kb (bases) | 383 | 617 | 245 | 138 | 304 | 314 |
| Base content (%) | 38.3% | 61.7% | ||||
| CYTB (size: 1144 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 432 | 712 | 297 | 135 | 328 | 384 |
| Base content per 1 kb (bases) | 378 | 622 | 260 | 118 | 287 | 336 |
| Base content (%) | 37.8% | 62.2% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 349 | 606 | 247 | 102 | 279 | 327 |
| Base content per 1 kb (bases) | 365 | 635 | 259 | 107 | 292 | 342 |
| Base content (%) | 36.5% | 63.5% | ||||
| ND2 (size: 1036 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 347 | 689 | 277 | 70 | 280 | 409 |
| Base content per 1 kb (bases) | 335 | 665 | 267 | 68 | 270 | 395 |
| Base content (%) | 33.5% | 66.5% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 123 | 225 | 86 | 37 | 106 | 119 |
| Base content per 1 kb (bases) | 353 | 647 | 247 | 106 | 305 | 342 |
| Base content (%) | 35.3% | 64.7% | ||||
| ND4 (size: 1375 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 485 | 890 | 353 | 132 | 394 | 496 |
| Base content per 1 kb (bases) | 353 | 647 | 257 | 96 | 287 | 361 |
| Base content (%) | 35.3% | 64.7% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 112 | 185 | 83 | 29 | 93 | 92 |
| Base content per 1 kb (bases) | 377 | 623 | 279 | 98 | 313 | 310 |
| Base content (%) | 37.7% | 62.3% | ||||
| ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 654 | 1167 | 486 | 168 | 518 | 649 |
| Base content per 1 kb (bases) | 359 | 641 | 267 | 92 | 284 | 356 |
| Base content (%) | 35.9% | 64.1% | ||||
| ND6 (size: 519 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 194 | 325 | 161 | 33 | 88 | 237 |
| Base content per 1 kb (bases) | 374 | 626 | 310 | 64 | 170 | 457 |
| Base content (%) | 37.4% | 62.6% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 13 (5.75%) 
Serine (Ser, S)
n = 16 (7.08%) 
Threonine (Thr, T)
n = 20 (8.85%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 11 (4.87%) 
Leucine (Leu, L)
n = 44 (19.47%) 
Isoleucine (Ile, I)
n = 29 (12.83%) 
Methionine (Met, M)
n = 13 (5.75%) 
Proline (Pro, P)
n = 15 (6.64%) 
Phenylalanine (Phe, F)
n = 11 (4.87%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 2 (0.88%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 8 (3.54%) 
Glutamine (Gln, Q)
n = 7 (3.1%) 
Histidine (His, H)
n = 9 (3.98%) 
Lysine (Lys, K)
n = 4 (1.77%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 9 | 12 | 6 | 3 | 22 | 1 | 12 | 7 | 0 | 1 | 2 | 7 | 1 | 10 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 4 | 3 | 6 | 0 | 2 | 2 | 6 | 0 | 2 | 1 | 11 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 9 | 0 | 3 | 2 | 6 | 0 | 1 | 4 | 0 | 2 | 0 | 0 | 4 | 4 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 2 | 0 | 3 | 1 | 1 | 0 | 3 | 1 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 40 | 68 | 79 | 40 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 59 | 37 | 108 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 43 | 112 | 66 | ||||||||||||
| ATP8 (size: 192 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITIVSSMITLFILFQLKISSQTFPMPPSPKHMTTLNTKNPWESKWTKIYLPLL* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 7 (11.11%)
Threonine (Thr, T)
n = 9 (14.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.59%)
Leucine (Leu, L)
n = 8 (12.7%)
Isoleucine (Ile, I)
n = 6 (9.52%)
Methionine (Met, M)
n = 4 (6.35%)
Proline (Pro, P)
n = 7 (11.11%)
Phenylalanine (Phe, F)
n = 4 (6.35%)
Tyrosine (Tyr, Y)
n = 1 (1.59%)
Tryptophan (Trp, W)
n = 3 (4.76%)
Aspartic acid (Asp, D)
n = 1 (1.59%)
Glutamic acid (Glu, E)
n = 1 (1.59%)
Asparagine (Asn, N)
n = 2 (3.17%)
Glutamine (Gln, Q)
n = 3 (4.76%)
Histidine (His, H)
n = 1 (1.59%)
Lysine (Lys, K)
n = 5 (7.94%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 3 | 3 | 1 | 0 | 2 | 0 | 5 | 3 | 0 | 0 | 1 | 0 | 0 | 2 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 8 | 1 | 0 | 2 | 4 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 3 | 14 | 26 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 23 | 15 | 23 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 11 | 38 | 11 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 33 (6.42%)
Threonine (Thr, T)
n = 39 (7.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 39 (7.59%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 29 (5.64%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 18 | 25 | 10 | 7 | 23 | 2 | 16 | 5 | 1 | 9 | 6 | 23 | 1 | 19 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 0 | 11 | 17 | 14 | 0 | 7 | 7 | 30 | 2 | 5 | 1 | 22 | 0 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 24 | 0 | 4 | 5 | 21 | 0 | 2 | 1 | 11 | 9 | 1 | 1 | 5 | 12 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 9 | 0 | 5 | 10 | 10 | 0 | 2 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 151 | 102 | 134 | 128 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 139 | 96 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 131 | 245 | 127 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 10 (4.41%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 12 (5.29%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 11 | 13 | 10 | 3 | 10 | 1 | 9 | 6 | 0 | 2 | 2 | 6 | 2 | 5 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 5 | 3 | 2 | 0 | 0 | 3 | 5 | 0 | 2 | 1 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 12 | 0 | 3 | 2 | 9 | 0 | 2 | 2 | 5 | 4 | 0 | 0 | 7 | 2 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 14 | 1 | 4 | 7 | 5 | 0 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 1 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 56 | 68 | 48 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 55 | 62 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 49 | 111 | 62 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 22 (8.46%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 7 | 9 | 7 | 2 | 14 | 1 | 10 | 7 | 0 | 3 | 2 | 9 | 0 | 15 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 1 | 4 | 10 | 0 | 3 | 3 | 13 | 1 | 1 | 2 | 7 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 11 | 0 | 7 | 2 | 9 | 0 | 1 | 3 | 5 | 7 | 0 | 1 | 2 | 5 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 0 | 3 | 1 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 63 | 62 | 76 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 63 | 58 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 66 | 126 | 64 | ||||||||||||
| CYTB (size: 1144 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 19 (5.0%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 32 (8.42%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 17 (4.47%)
Leucine (Leu, L)
n = 53 (13.95%)
Isoleucine (Ile, I)
n = 42 (11.05%)
Methionine (Met, M)
n = 17 (4.47%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 29 (7.63%)
Tyrosine (Tyr, Y)
n = 14 (3.68%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 7 (1.84%)
Histidine (His, H)
n = 14 (3.68%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 25 | 16 | 3 | 3 | 33 | 2 | 11 | 6 | 1 | 5 | 3 | 9 | 0 | 14 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 2 | 9 | 8 | 0 | 1 | 2 | 20 | 2 | 4 | 2 | 16 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 20 | 0 | 4 | 5 | 13 | 0 | 1 | 1 | 6 | 8 | 0 | 1 | 4 | 13 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 0 | 4 | 7 | 9 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 92 | 119 | 92 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 95 | 78 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 110 | 187 | 77 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 23 (7.26%)
Serine (Ser, S)
n = 28 (8.83%)
Threonine (Thr, T)
n = 21 (6.62%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 12 (3.79%)
Leucine (Leu, L)
n = 56 (17.67%)
Isoleucine (Ile, I)
n = 26 (8.2%)
Methionine (Met, M)
n = 21 (6.62%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 23 (7.26%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 14 | 20 | 5 | 4 | 31 | 2 | 14 | 7 | 0 | 1 | 1 | 9 | 1 | 10 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 0 | 4 | 8 | 10 | 1 | 1 | 4 | 6 | 1 | 2 | 1 | 18 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 13 | 0 | 1 | 5 | 18 | 0 | 2 | 2 | 6 | 7 | 0 | 0 | 5 | 7 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 10 | 1 | 1 | 2 | 7 | 0 | 0 | 1 | 7 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 82 | 91 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 89 | 57 | 138 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 76 | 179 | 56 | ||||||||||||
| ND2 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 15 (4.36%)
Serine (Ser, S)
n = 24 (6.98%)
Threonine (Thr, T)
n = 46 (13.37%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 59 (17.15%)
Isoleucine (Ile, I)
n = 44 (12.79%)
Methionine (Met, M)
n = 28 (8.14%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 9 (2.62%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 13 (3.78%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 24 | 26 | 10 | 6 | 30 | 0 | 13 | 12 | 1 | 1 | 0 | 4 | 0 | 6 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 0 | 5 | 10 | 0 | 0 | 3 | 9 | 1 | 2 | 2 | 17 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 26 | 0 | 1 | 4 | 15 | 0 | 4 | 0 | 5 | 4 | 0 | 0 | 7 | 14 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 4 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 37 | 89 | 155 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 29 | 102 | 65 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 86 | 189 | 66 | ||||||||||||
| ND3 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 15 (4.36%)
Serine (Ser, S)
n = 24 (6.98%)
Threonine (Thr, T)
n = 46 (13.37%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 59 (17.15%)
Isoleucine (Ile, I)
n = 44 (12.79%)
Methionine (Met, M)
n = 28 (8.14%)
Proline (Pro, P)
n = 21 (6.1%)
Phenylalanine (Phe, F)
n = 13 (3.78%)
Tyrosine (Tyr, Y)
n = 9 (2.62%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 13 (3.78%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 24 | 26 | 10 | 6 | 30 | 0 | 13 | 12 | 1 | 1 | 0 | 4 | 0 | 6 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 0 | 5 | 10 | 0 | 0 | 3 | 9 | 1 | 2 | 2 | 17 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 26 | 0 | 1 | 4 | 15 | 0 | 4 | 0 | 5 | 4 | 0 | 0 | 7 | 14 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 4 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 37 | 89 | 155 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 29 | 102 | 65 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 86 | 189 | 66 | ||||||||||||
| ND4 (size: 1375 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.94%)
Alanine (Ala, A)
n = 20 (4.38%)
Serine (Ser, S)
n = 41 (8.97%)
Threonine (Thr, T)
n = 43 (9.41%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 9 (1.97%)
Leucine (Leu, L)
n = 83 (18.16%)
Isoleucine (Ile, I)
n = 53 (11.6%)
Methionine (Met, M)
n = 40 (8.75%)
Proline (Pro, P)
n = 19 (4.16%)
Phenylalanine (Phe, F)
n = 17 (3.72%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 11 (2.41%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 24 (5.25%)
Glutamine (Gln, Q)
n = 11 (2.41%)
Histidine (His, H)
n = 14 (3.06%)
Lysine (Lys, K)
n = 15 (3.28%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 31 | 34 | 12 | 3 | 46 | 3 | 18 | 11 | 0 | 2 | 1 | 5 | 1 | 10 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 3 | 4 | 12 | 4 | 0 | 2 | 5 | 9 | 2 | 2 | 1 | 13 | 3 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 24 | 0 | 6 | 7 | 17 | 0 | 7 | 4 | 6 | 9 | 4 | 1 | 8 | 16 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 8 | 0 | 2 | 3 | 15 | 0 | 2 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 117 | 186 | 95 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 112 | 92 | 202 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 20 | 124 | 218 | 96 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 11 (11.22%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 4 (4.08%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 1 | 7 | 4 | 4 | 11 | 0 | 2 | 2 | 0 | 0 | 0 | 4 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 2 | 2 | 4 | 0 | 0 | 0 | 4 | 0 | 1 | 1 | 0 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 3 | 0 | 2 | 5 | 3 | 0 | 0 | 0 | 2 | 1 | 0 | 1 | 0 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 19 | 25 | 31 | 24 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 31 | 17 | 43 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 27 | 44 | 26 | ||||||||||||
| ND5 (size: 1821 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.29%)
Alanine (Ala, A)
n = 34 (5.61%)
Serine (Ser, S)
n = 54 (8.91%)
Threonine (Thr, T)
n = 61 (10.07%)
Cysteine (Cys, C)
n = 8 (1.32%)
Valine (Val, V)
n = 14 (2.31%)
Leucine (Leu, L)
n = 91 (15.02%)
Isoleucine (Ile, I)
n = 61 (10.07%)
Methionine (Met, M)
n = 43 (7.1%)
Proline (Pro, P)
n = 24 (3.96%)
Phenylalanine (Phe, F)
n = 36 (5.94%)
Tyrosine (Tyr, Y)
n = 18 (2.97%)
Tryptophan (Trp, W)
n = 13 (2.15%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 43 (7.1%)
Glutamine (Gln, Q)
n = 14 (2.31%)
Histidine (His, H)
n = 11 (1.82%)
Lysine (Lys, K)
n = 25 (4.13%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 33 | 41 | 20 | 11 | 41 | 1 | 17 | 14 | 0 | 5 | 1 | 8 | 0 | 18 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 4 | 4 | 5 | 18 | 11 | 0 | 0 | 7 | 15 | 4 | 6 | 4 | 14 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 24 | 28 | 0 | 6 | 9 | 31 | 0 | 1 | 7 | 9 | 9 | 0 | 1 | 16 | 27 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 10 | 1 | 4 | 6 | 25 | 0 | 1 | 2 | 6 | 0 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 95 | 131 | 241 | 140 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 64 | 165 | 133 | 245 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 190 | 275 | 133 | ||||||||||||
| ND6 (size: 519 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (15.12%)
Alanine (Ala, A)
n = 9 (5.23%)
Serine (Ser, S)
n = 8 (4.65%)
Threonine (Thr, T)
n = 5 (2.91%)
Cysteine (Cys, C)
n = 3 (1.74%)
Valine (Val, V)
n = 22 (12.79%)
Leucine (Leu, L)
n = 30 (17.44%)
Isoleucine (Ile, I)
n = 15 (8.72%)
Methionine (Met, M)
n = 7 (4.07%)
Proline (Pro, P)
n = 3 (1.74%)
Phenylalanine (Phe, F)
n = 9 (5.23%)
Tyrosine (Tyr, Y)
n = 9 (5.23%)
Tryptophan (Trp, W)
n = 7 (4.07%)
Aspartic acid (Asp, D)
n = 6 (3.49%)
Glutamic acid (Glu, E)
n = 8 (4.65%)
Asparagine (Asn, N)
n = 3 (1.74%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 1 (0.58%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 1 | 2 | 4 | 0 | 0 | 0 | 9 | 0 | 0 | 16 | 0 | 1 | 5 | 9 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 3 | 0 | 5 | 0 | 3 | 1 | 10 | 1 | 4 | 11 | 3 | 0 | 0 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 0 | 0 | 5 | 0 | 0 | 0 | 3 | 0 | 9 | 0 | 5 | 17 | 3 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 6 | 6 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 8 | 34 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 22 | 28 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 50 | 3 | 26 | 94 | ||||||||||||
| Total protein-coding genes (size: 11381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 211 (5.57%)
Alanine (Ala, A)
n = 215 (5.67%)
Serine (Ser, S)
n = 293 (7.73%)
Threonine (Thr, T)
n = 335 (8.84%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 165 (4.35%)
Leucine (Leu, L)
n = 595 (15.7%)
Isoleucine (Ile, I)
n = 364 (9.6%)
Methionine (Met, M)
n = 240 (6.33%)
Proline (Pro, P)
n = 192 (5.06%)
Phenylalanine (Phe, F)
n = 224 (5.91%)
Tyrosine (Tyr, Y)
n = 128 (3.38%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 92 (2.43%)
Asparagine (Asn, N)
n = 174 (4.59%)
Glutamine (Gln, Q)
n = 86 (2.27%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 101 (2.66%)
Arginine (Arg, R)
n = 64 (1.69%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 180 | 184 | 213 | 95 | 47 | 274 | 14 | 142 | 83 | 3 | 45 | 20 | 89 | 11 | 124 | 100 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 27 | 12 | 17 | 47 | 82 | 84 | 2 | 26 | 37 | 123 | 25 | 34 | 18 | 135 | 5 | 67 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 82 | 185 | 1 | 44 | 50 | 148 | 1 | 25 | 25 | 66 | 62 | 11 | 23 | 62 | 112 | 35 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 66 | 83 | 9 | 33 | 38 | 100 | 1 | 8 | 6 | 49 | 1 | 0 | 0 | 7 | 1 | 93 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 754 | 873 | 1264 | 901 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 458 | 985 | 761 | 1588 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 135 | 946 | 1808 | 903 | ||||||||||||
>NC_014698.1 Pseudomys chapmani mitochondrion, complete genome GTTAATGTAGCTTATCAACAAAGCAAAGCACTGAAAATGCTTAGATGGATTTTAAAAATCCCATAAACAC AAAGGTTTGGTCCTGGCCTTATAGTTAATTAGAGATAAGATTACACATGCAAATATCCATAAGCCAGTGC AAAATCCCTTAAATATTTATACTAAATTTTAAGGAGAGGGTATCAAGCACATAAAAATAGCTCAAGACAC CTTGCCAAGCCACACCCCCACGGGACTCAGCAGTGATAAACATTAAGCAATGAACGAAAGTTTGACTAAG CTATATCTCTTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAACTATA TACGGCGTAAAACGTGTAGAATATGCATAACAAAATAGAATTAAAACCTAACTAATATGTGAAAATCCTT TGTTAAAACCTAAATTCAATAACGAAAGTAATTCTAATAAAACAAATTACACGATAGCTAAGATCCAAAC TGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTAAATGATTACATAACAAAACCATTTGCCAGAGA ACTACTAGCCACAGCTTAAAACTCAAAGGACCTGGCGGCACTTTATATCCATCTAGAGGAGCCTGTTCTA TAATCGATAATCCCCGCTCTACCTCACCATCTCTTGCTAATTCAGTCTATATACCGCCATCTTCAGCAAA CCCTAAAAAGGTACCAAAGTAAGCACAAGAATCAAACATAAAAACGTTAGGTCAAGGTGTAACCAATGAG GTGGAAAGAAATGGGCCACATTTTCTTAACAAGAACACAACGAAACCCTTTATGAAACTAAAGGATAAAG GAGGATTTAGTAGTAAATTAAGAGTAGAGAGCTTAATTGAATAGAGCAATGAAGTGCGCACACACCGCCC GTCACCCTCCTCAAACTAAATTTATCTTATAATAAATAATACAAAAACTCAATTTACGAGAGGAGATAAG TCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAATAATCATAGTGTAGCTTAATATAAAGCACCTG GCTTACACCCAGGAGAATTCATAAAAATGAACACTTTGAACCAAGTCTAGCCCCAATAAAATTACATATA ACTACACTAATTTACTAAATCAAAACATTCAACCAGTTACAAGTATTGGAGAAAGAAACTTACCACGGGA GCTATAGAGAAAGTACCGTAAGGGAAAGATGAAAGACCACTTAAAAGTGATAAAAAGCAAAGATAAACCC TTGTACCTTTTGCATAATGAGTTAACTAGAAAACTCCTAACTAAACGAATTTAAGCTAGGAACCCCGAAA CCAAACGAGSTACCTAAAAACAATTTATCGAATCAACCCATCTATGTGGCAAAATAGCGGGATGATTTTT AGGTAGAGGTGAAAAGCCAAACGAGCTTGGTGATAGCTGGTTACCCAAAAAATGAATATCAGTTCAACTT TAAATTTACTAAAAGAACACCTAATCCCTACGTAAATTTTAAAATTTAGCCAAAAGAGGGACAGCTCTTT AGGAAAGGAAAAAACCTTAAATAGTGAATAAACAAAAACTTATCATTAAACCATTGTAGGCCTTAAAGCA GCCACCAATAAAGAAAGCGTTCAAGCTCAACACTAAAAAATTACAAATTCCATACACATCAATAAATTCC TATATAATTAACTGGGTTAATCTATAAAATTATAGATGTAATACTGTTAATATGAGTAACAAGAATATAA TTCTCCAAGCACAAGTGTATAACAACACGGATAACCATTGTTATTTATCACACCACAGGTATTATTCCAA AAATAAAACTACCTATTACTAACTTGTTAATCCGACACAGGAGTGCTCTAAGGAAAGATTAAAAAAAATA AAAGGAACTCGGCAAACCTGAATCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTACAAGTATTAGA GGCACTGCCTGCCCAGTGAAAATTTTAAACGGCCGCGGTATTCTGACCGTGCAAAGGTAGCATAATCACT TGTTCCTTAATTAGGGACTAGCATGAACGGCTAAACGAGGATTCAACTGTCTCTTATTTTAAATCAGTGA AATTGACCTTCCAGTGAAGAGGCTGGAATACAAAAATAAGACGAGAAGACCCTATGGAGCTTAAATTAAA AGTTTAATTTTTTATCTAACAACCTAATGGTTCAACAAAAAACTCTAAACTTAAAATTTCGGTTGGGGTG ACCTCGGAGAACAAAAAATCCTCCGAATGATTATAACTAAGACACACAAGTCAAAGTAAGAAACCTATCT TATTGACCCATAAACTTGAACAATGGACCAAGTTACCCTAGGGATAACAGCGCAATCCTATTTTAGAGTC CATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGCGCAAAAGCTATTAAT GGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCT ATCTATTTACAATTTCTCCCAGTACGAAAGGACAAGAGAAATAGAGCCAACTTTTCAAAAGCGCTCTCAA CATAAACTATGAACTAAATCTCAATAAAATATATATGTACAAAACACCAACCTAGATAAGGTTATTAGGG TGGCAGAGCCAGGAAATTGCATAAGATTTAAAACCTTTCAACCAGAGGTTCAAATCCTCTCCCTAATAGT GTACTTTATTAATATATTAGCTTTCCTACTTCCAATTCTAGTCGCCATAGCCTTCTTAACTTTAGTAGAA CGAAAAATCCTAGGCTATATACAACTACGAAAAGGACCAAACATTGTAGGACCATACGGCATATTCCAAC CATTTGCCGATGCTATGAAACTTTTCATAAAAGAATCAACACGCCCACTAACAACTTCAATTTCACTATT CATCATTGCACCAACACTATCACTAACACTAGCATTAAGTCTATGAATCCCTCTTCCAATACCTCATCCA CTAATCAACCTAAACCTGGGAATCCTATTTATTCTAGCGACATCAAGCCTATCAGTATATTCCATTTTAT GATCAGGATGAGCATCCAACTCAAAATACTCATTATTCGGTGCCCTGCGAGCAGTAGCCCAAACAATCTC ATACGAAGTAACCATAGCTATCATCCTACTATCAGTACTCCTAATAAGCGGGTCATTTTCACTACAAACA CTTATATTTTCCCAAGAACAAATATGACTAATTATCCCAACCTGACCATTAGCCCTAATATGATATATTT CAACCCTAGCAGAAACAAACCGATCCCCATTTGACCTAACCGAAGGAGAATCCGAACTAGTATCTGGCTT CAATGTTGAATATGCAGCTGGCCCATTCGCACTTTTCTTTATAGCCGAATACACCAATATCATCCTCATA AATGCCCTAACAACTATTGTATTCTTAGGACCCCTATACAACATATTTATACCAGAGCTCTACTCAATTA ATTTTATAACAAAAACACTCCTACTATCAATCACATTTCTATGAATCCGAGCATCATATCCACGATTCCG ATATGACCAATTAATACACTTACTATGAAAAAACTTCTTACCATTAACACTAGCATTATGTATATGACAT GTATCATTACCAATTTTCATAGCAAGTATCCCACCACACATATAGAAATATGTCTGATAAAAGAATTACT TTGATAGAGTAAAACATAGAGGTTCAAGTCCTCTTATTTCTAGAACAATAGGACTTGAACCTACTCCTAA GAATCCAAAATTCTTCGTGCTACCAAGACACCACGTTCTATAGTAAGGTCAGCTAATTAAGCTATCGGGC CCATACCCCGAAAACGTTGGTTTAAATCCTTCCCGTACTAATTAATCACATCACCCTTATCATCATTTAC TTTACCATCCTTATGGGACCTGTAATTACAATATCAAGTACCAACCTACTACTTATATGAACCGGACTAG AAATAAGTCTCCTAGCAATTATCCCACTATTAATCAACAAAAAAAACCCACGATCAACTGAAGCAGCAAC TAAATATTTCATCACACAATCCACAGCCTCTATAATCATACTTCTAGCCATTATTCTAAACTATAAACAA CTAGGGTTATGAACATTTCAACAACAAACAAACAATATATTAATTAACATAACATTAATCGCACTATCAA TAAAACTAGGAGTTGCACCATTCCACTACTGACTCCCAGAAGTAACACAGGGCATTCCCCTCCACACAGG ATTAATTATTCTCACATGACAAAAAATCGCCCCATTATCAATCTTAATTCAAATATATCAACTTCTAAAT CCAACCGCCACTCTAATTCTAGCAGTATTATCAATCTTCACAGGAGCATGAGGAGGCATAAATCAAACAC AAACCCGAAAAATCATAGCATTTTCATCCATCGCCCATATAGGATGAATACTAGCAATCCTACCATTCAA TCCAACTATTTCACTACTAAACCTAACAATTTATATCATCACAACTATTCCAATATTTATAGTACTTATA ACTTTTAACTCCACAACCATCAACTCAATCTCACTTCTATGAAATAAAACACCAATAATGACAACAATTA CCCCACTAATTCTAATATCACTAGGAGGCCTACCACCATTAACAGGATTCTTACCAAAATGAATTACCAT TACAGAACTACTAAAAAACAACTGCCTAATCCTAACAACAATAATAACCATCATAGCATTACTTAATTTA TTCTTCTACACCCGACTAATTTACTCAACCTCAATAACAATCTTTCCAACTAACAGTAACTCAAAAATAA TATCACATACTACACACCAAAAATATAACCCAATACTCCCTCTTCTAACAATAATCAGTACACTCACACT ACCACTTTCACCCCAATTAATCTCCTAGAAGTTTAGGATATAAAGTCCAAGAGCCTTCAAAGCCCTAAGA AAACACATAGTTTAACTTCTGATAAGGTCTGTAAGATTACACCTTACATCTACTGAATGCAAATCAGTTA CTTTTATTAAGCTAAAACCTCCCCTAGATTGATAGGACTTAAACCTACGAAATTTTAGTTAACAGCTAAA TACCCTACACTGGCTTCAATCTACTTCTCCCGCCTAATAGAAAAGAGGCGGGAGAAGCCTTAGTAGAATT ATTTATCTACACCTTCGAATTTGCAATTCGACATGAACATCACCTTAAGGCTATGATAAAAAGAGGATTA TAACCTCTGTACTTAGATTTACAGTCTAATGCCTACTCAGCCATTTTACCTATGTTCGTAAACCGTTGAC TATTTTCAACTAATCACAAAGATATTGGAACCCTATACCTATTATTTGGTGCCTGAGCAGGAATAGTCGG AACAGCCCTTAGTATTCTAATTCGAGCTGAACTAGGACAGCCAGGTGCTCTTTTAGGAGACGACCAAATT TATAATGTAATCGTTACAGCCCATGCATTTGTCATAATTTTCTTTATAGTAATACCAATAATAATTGGCG GCTTCGGAAACTGACTCGTACCACTAATAATTGGAGCCCCAGACATAGCATTTCCACGAATAAATAACAT AAGTTTCTGACTTCTTCCACCATCATTCCTCCTACTCCTAGCATCTTCAACAGTAGAAGCTGGAGCAGGG ACAGGGTGAACTGTTTACCCACCTCTAGCTGGCAACCTAGCACATGCCGGAGCATCAGTAGACCTAACAA TCTTTTCTCTACACCTAGCAGGTGTCTCATCCATCCTAGGAGCCATCAACTTCATCACTACTATTATTAA TATAAAACCACCAGCCATAACTCAATATCAAACACCATTATTTGTTTGATCCGTATTAATCACCGCCGTC TTACTGCTTCTTTCACTCCCAGTTCTCGCTGCAGGAATTACAATACTACTAACAGACCGAAACCTTAATA CAACCTTCTTTGATCCTGCAGGAGGAGGAGACCCAATCCTCTACCAACATTTATTTTGATTCTTTGGCCA CCCAGAAGTATATATTTTAATTTTACCAGGATTTGGAATTATCTCACATGTAGTAACTTACTACTCAGGA AAAAAAGAACCATTCGGATATATAGGAATGGTATGAGCCATAATATCTATCGGCTTCCTAGGTTTTATTG TATGAGCACATCACATATTTACAGTTGGTATGGATGTAGATACACGAGCCTATTTTACATCAGCCACTAT AATCATTGCTATTCCCACTGGAGTTAAAGTATTCAGCTGACTAGCAACTTTACATGGAGGAAACATCAAA TGATCACCAGCTATATTATGAGCCTTAGGCTTTATCTTTTTATTCACAGTTGGAGGCTTGACTGGAATCG TATTATCAAACTCATCACTTGACATTGTACTTCACGACACATATTATGTAGTAGCCCACTTCCACTATGT CCTATCCATAGGAGCAGTATTTGCTATCATAGCTGGATTTGTTCACTGGTTCCCACTATTCACAGGTTAT ACACTGAACGACACATGAGCAAAAGCTCACTTCGCTATCATATTCGTGGGAGTAAACCTAACATTCTTCC CTCAACACTTCCTAGGTCTATCAGGAATACCTCGACGTTACTCAGACTATCCAGATGCCTACACTACATG AAACACTATCTCCTCAATAGGATCATTCATCTCATTAACAGCCGTTTTAGTAATAATCTTTATGATTTGA GAAGCCTTCGCCTCAAAACGAGAAGTATTATCAGTCTCCTACACATCAACAAACCTCGAATGACTTCACG GATGTCCACCACCATATCACACATTCGAAGAACCTTCTTACGTAAAAACAAAATAAGAAAGGAAGGACTC GAACCCCCTAAAATTGGTTTCAAGCCAATCTCATAACCGCTATGTCTTTCTCCATAAGATATTAGTAAAA AAATTACATAACTTTGTCAAAGTTAAATTATAGTATAAAGTCTATATATCTTATATGGCATACCCATTTC AATTAGGCCTTCAAGATGCTACATCACCCATCATAGAAGAACTTACAAATTTTCATGATCATACATTAAT AATCGTGTTTCTCATTAGTTCCCTAGTGCTATATATTATCTCACTTATATTAACAACAAAATTAACTCAC ACAAGCACAATAGACGCCCAAGAAGTAGAAACAATTTGAACTATTCTACCAGCCGCTATTCTTATCCTAA TTGCCCTACCATCACTACGAATTCTATATATAATAGACGAAATCAATAACCCAGTCCTAACAGTAAAAAC TATAGGCCATCAATGATACTGAAGCTATGAGTATACAGACTACGAAGACTTATGCTTTGACTCTTATATA ATCCCAACAAACGAATTAAAACCAGGAGAACTCCGTCTTTTAGAAGTAGATAATCGAGCTGTACTTCCAA TAGAACTGCCAATCCGTATACTAATCTCATCAGAAGACGTTCTTCACTCATGAGCTGTTCCATCTTTAGG ACTCAAAACTGACGCAATCCCAGGACGATTAAATCAAGCTACCGTCACATCAAATCGACCAGGACTTTTC TACGGCCAATGCTCCGAAATCTGCGGATCTAATCACAGTTTTATACCTATTGTACTTGAAATAGTACCTC TAAAAGATTTCGAAAATTGATCAATCCTTATATCATAGACTCACTATGAAGCTAAGAGCGTTAACCTTTT AAGTTAAAATTAGAGACTTTAAATCTCCATAGTGACATGCCGCAATTAGATACATCCACATGATTTATCA CAATTGTCTCGTCAATAATCACATTATTCATTCTATTTCAACTAAAAATTTCCTCACAAACATTCCCAAT ACCCCCATCACCAAAACATATAACAACATTAAACACAAAAAACCCTTGAGAATCAAAATGAACGAAAATC TATTTACCTCTTTTATAACTCCTACAGTAATAGGCCTACCAGTCGTAATCACTATTATTATATTTCCATC AATTCTATTTCCATCCTCAGAACGACTAATCAGCAACCGTCTCCACTCATTCCAACACTGACTGATTAAG CTCATTATCAAACAATTAATATTAATTCATTCACCAAAAGGACGAACTTGAGCATTAATAATTGTCTCCC TAATTATATTTATTGGATCAACAAACCTTCTAGGACTACTACCACATACTTTTACACCAACCACTCAACT ATCTTTAAACTTAAGCATAGCAATCCCGCTTTGAGCAGGAGTTGTAATCCTAGGCCTTCGACACCAACTA AAAAATTCTTTAGCTCATTTTCTTCCACAAGGAACCCCAATTCCTCTTATTCCCATACTAATTATCATTG AAACCATTAGCCTCTTAATTCAACCAATAGCACTAGCAGTACGGCTAACAGCCAATATCACAGCAGGTCA CCTACTAATACATCTAATTGGAGGTGCTACCATAGTATTAATAGATATTAGTCCACCAACAGCTACAATC ACATTTATTATTTTATTACTATTAACAATTCTAGAATTTGCCGTAGCCCTAATCCAAGCTTACGTGTTTA CTCTTCTAGTAAGCCTATACTTACACGATAATTCATAATGACCCACCAAACACATGCATACCACATAGTA AACCCAAGCCCATGACCCCTCACAGGAGCCTTTTCAGCCCTTCTTCTTACCTCAGGCCTAGTAATATGAT TTCACTACAACTCTACCACCCTATTACTCATTGGATTACTTACAAACATACTAACAATATATCAATGATG ACGAGATATTATTCGAGAAGGAACCTACCAAGGCCACCATACCCCTATCGTACAAAAAGGATTACGCTAC GGAATAATTCTATTTATTATCTCTGAAGTATTTTTCTTCGCAGGATTTTTTTGAGCATTTTACCATTCAA GCTTAGCACCAACACACGACCTTGGAAGCTGCTGACCCCCAACAGGAATTTTACCATTAAATCCACTAGA AGTTCCACTACTAAACACATCAGTACTACTAGCATCAGGTGTATCTATCACATGAGCCCACCATAGTTTA ATAGAAGGTAAACGAAATCATATAAACCAAGCTTTAGCAATCACCATCATACTAGGACTGTATTTTACTA TATTACAAGCCTCAGAATATTTCGAAACATCATTCTCTATCTCAGATGGTGTCTACGGATCTACCTTTTT TATGGCAACAGGATTTCACGGCCTACATGTAATTATTGGGTCCTCTTTTCTAATTGTATGCCTACTACGA CAATTAAAATTCCACTTTACATCCAAACACCACTTTGGATTTGAAGCAGCAGCATGATATTGACACTTGG TAGATGTTGTCTGACTTTTCCTTTACGTTTCAATCTATTGATGAGGATCTTACTCCCTTAGTATAATTAA TACAACTGACTTCCAATTAGTAAAATCTGATAAACTTCAGAAGAGAGTAATCAACCTAATTATAATTATT TTAACCAATAGCCTGTTATCTCTAATCCTAGTCTCCATCGCATTTTGACTACCTCAAGTAAACATATACA CAGAAAAAGTAAACCCCTATGAATGTGGGTTCGACCCTACAAGTTCCGCACGCCTACCATTCTCAATAAA ATTTTTCTTAGTAGCTATCACATTTCTACTATTCGACCTAGAAATTGCTCTCCTTCTTCCACTTCCATGA GCTATCCAAACAACTAACACCATTACTATAACAATATCAGCCTTCATCCTAGTAACAATCTTATCTCTAG GACTAGCTTACGAATGGTTACAAAAAGGATTAGAATGAACAGAATAACTGGTAATTAGTTTAACAAAAAT TAATGATTTCGACTCATTAGATTATGAAAAAATTCATAATTACCAACAATGACATATACCCTTCTAAACC TTACACTAGCCTTTTCCCTCTCACTAATAGGAACCCTTATTTTCCGCTCACACCTAATATCCACTCTCCT ATGTCTAGAAGGAATAATATTGTCTTTATTTACTATAACTTCAATAGCTACTCTAAACTCCAACTCCATA GCATCTCTCCCTATTCCCATTACAATTTTAGTATTTGCTGCATGCGAAGCAGCAGTAGGACTCGCCCTAC TAGTAAAAATCTCCAACACTTATGGAACTGATTACGTACAAAACCTAAACCTTCTACAATGCTAAAAATT ATTTTTCCTTCATTAATGCTTCTCCCACTAACTTGGTTGTCAAAAGGAAAAAAAACCTGAACCAACGTAA CCTCCTACAGCTTCCTAATCAGTCTTACTAGTCTAACACTATTACTACATGATCAAAACTACCAAAACCA TTCTATCACATTTTTCTCAGACAACCTGTCCACACCACTAATTATCCTAACAACCTGGCTACTGCCTCTT ATACTAATAGCCAGCCAAAATCACATAAAAAAAGAAAAAAACATATATCAAAAAATATATATTTCAATAT TAATTAATCTACAAATCCTTCTCATCTTAACATTCTCCGTAAATGAACTTATCCTATTTTATATCCTGTT TGAAGCCACCCTAATCCCAACACTTATTATCATTACACGATGGGGAAACCAAACAGAACGATTAAACGCA GGACTTTACTTCCTATTTTATACACTAGTTGGTTCAATCCCATTATTAATTGTCCTTATTTACATTCAAA ACTCAACAGGAACCCTTAATTTCCTAATCATCTCACTAACAAATACACACATTGATAACACATGGTCTAG TAATATTATGTGACTATCATGCATAATAGCATTTCTCGTAAAAATACCACTATACGGAGTGCACTTATGA CTACCAAAAGCCCACGTTGAAGCCCCAATCGCAGGGTCTATGATTCTAGCTGCCATTCTACTAAAATTAG GAGGGTATGGAATAATACGAATCTCCATCATACTAGACCCCCTAACAAAACACATGGCCTATCCATTCAT ATTATTATCATTATGAGGCATAATCATAACAAGTTCAATTTGCCTACGTCAAACAGACCTAAAATCACTA ATCGCTTACTCCTCAGTAAGTCATATAGCCCTAGTAATCACATCCATCATAATCCAAACCCCGTGAAGTT TCATAGGCGCTATAATACTAATAATCGCCCATGGCCTAACCTCATCCCTACTATTTTGCCTAGCAAATTC AAACTACGAACGTATTCACAGCCGAACAATAATTATAGCCCGAGGACTACAAACAATTTTTCCACTAATA ACAATACTATGACTATTAGCCAGTCTAACTAACATAGCCATCCCGCCAACAATCAACCTAATCGGTGAAT TATTTATCACCATATCATTATTTTCTTGATCTAATACCTCTATTATCCTTATTGGCCTAAACATTATCAT CACAGCCCTATACTCAATATACATAATCATTACCACCCAACGAGGAAAATTAACTAACCATATAAACAAC ATGCACCCGTCACACACACGAGAATTAACCCTAATAACTCTACATTTAATCCCACTTGCTCTACTTACCA TAAGCCCAAAACTAATCATAGGCCCAATAACATGTAAATATAGTTTACAAAAAACATTAGACTGTGAATC TAATAACAGGAAATTATACTCCTTATTTACCAAGAAAGAATACAAGAACTGCTAATTCACGTACCCGTGC TTAAAACACATGGCTTTCTTACTTTTATAGGATAAAAGTAATCCATTGGTCTTAGGAATCAAAAATTATT GGTGCAAATCCAAATAAAAGTAATCAACACAGCCACATCTTCAATACTAATAACCTTCATAGTATTAACC TTCCCCATCATACTTCAATCAACTAACCTCACCAAAAATACAAACTTTCCTCTTCTAGCCATCACCGCAA TCAAATTCTCCCTAATTCTAAGCCTCATACCTCTATTAATATTCCTATATACCAACACAGAACATGTTAT CACCAACTGACACTGAATAACCATAAACTCAATTAAAATCTCAATAAGCTTTAAAATTGACTACTTCTCT CTTCTATTTATATCAGTAGCCCTTTACGTAACATGATCAATCATAGAATTTTCTTCATGATATATACACT CAGATCCCGACCTCAATCGATTTATCAAATATCTAATATTTTTCCTAATCACCATGCTAATTTTAACCTC AGCTAACAATTTATTCCAACTTTTCATTGGCTGAGAAGGAGTAGGAATTATATCCTTCCTACTTATCGGA TGATGATATGGGCGCTCAGACGCAAATACCGCAGCCCTACAAGCAATTCTATACAACCGAATCGGCGATA TTGGCCTAATCCTATCAATAACATGATTTTGCCTAAATAACAACTCCTGAGAATTACAACAAATTATACT AACTAATAATAATAACCTAATTCCTCTTATAGGACTACTAATTGCAGCTGCAGGAAAATCAGCTCAATTT GGACTTCACCCATGACTCCCATCAGCCATAGAAGGCCCAACCCCAGTTTCCGCACTACTTCACTCAAGCA CAATAGTTGTAGCAGGAGTTTATCTTATAGTTCGATTCCACCAACTCACATCAAATAACACTATCATTCT AACAACAATACTATGTCTTGGAGCCATAACCACACTATTTACAGCTATCTGTGCCTTAACCCAAAACGAC ATTAAAAAAATTGTAGCCTTCTCCACATCCAGCCAACTTGGCCTGATAATAGTAACTCTAGGGATTAACC AACCTTATCTAGCTTTTCTCCACATCTGCACCCACGCCTTCTTTAAAGCCATATTATTTCTTTGCTCTGG ATCAATTATCCACAGCCTAAACGATGAACAAGATATTCGAAAAATAGGGAACTTAACAAAAACCTTACCA GCCACCTCATCCTGCCTAACTATCGGATGTTTGGCCCTCACAGGAACACCATTCCTCACTGGATTTTATT CAAAAGACTCAATTATCGAATCAATCAACACATCCCACACAAACGCCTGAGCCCTTCTAATTACACTTAT CGCCACAACCATAACAGCCATATACGGCATACGAATTATCTATTTCACTATAATATCAAAACCACGTTAC CCACCAACAATCTCTATAAATGAAAACAACCCAAACATCATTAATCCTATTAAACGACTAGCATTAGGAA GTATCTTAGCAGGATTCATCCTATCAATTAGCATTCCACCCGCCAACACTCAAACTCTTACAATACCCTG ATACCTAAAATTCACAGCACTTATAGTCTCTATCCTAGGGTTCTTAATCTCATTAGAATTAAATAACCTT ACCCTAAAACTTCTTCAACCTAAAAATAACATTTACTCATCATTTTCAACAGCCTTAGGCTACTACCCAA TAATTATACACCGCATCTTACCAAAAAAAACCCTAAACTCAAGCTTTAAAACCTCATTAAACACAATAGA CCTAATCTGACTAGAAAAAACCTTTCCAAAATCAATTTCCACCATAAATACAAATATAATCAAAACCCTA ACAAACCAAAAAGGAATAGTAAAACTCTATTTTATGTCATTTCTAATCTCAATCCTACTATTCACCATCC TCTGTATAATTAATCTCGAGTAACCTCAATAACAATAAAAACCCCAGCAAACAAAGACCATCCAGCAATA ACCATTATCCAAACTGCCCAATCATACAACCCCGCAACCCCAATCCCACCCTCCAACATCATACCAACAA TATCAACCTCATAAATCAATCAATCATCCAACTCCACCAAATCAATTAACCCTGCTCCACTAAAATAATT AAGAAGACCAACATAAACCACTTCCACTAACAACCCAACAACCAAAGATCAAAAAACTAACCAATTAGAG CCCCAGGTCTCAGGATACTCTTCAGTAGCCATAGCAGTAGTATACCCAAACACAACCAACATACCACCCA AATAAATCAAAAATACAATCAAACCTAAAAAAGATCCACCTAACCCCAAAACTATAAGACACCCAATACA ACCACAAATGATCAAACCAAGCCCACCATAAATAGGAGAAGGTTTCAAAGCCAATCCTAAACTCCCTGCC AAAAATAATAAACTTAAAATAAAAACATAATTAATCACTATTTCCATACAGCATTTAACTGTAACTAATG ACATGAAAAATCATCGTTGTAATTCAACTATAGAAACAAATAATGACAAACATACGAAAAACACATCCCC TAATAAAAATCATCAACCACTCTTTTATTGACTTACCAACCCCATCCAACATCTCATCTTGATGAAACTT TGGTTCCCTATTAGGACTATGCCTGACAATCCAAATCATCACAGGACTATTTTTAGCTATACACTACACA TCAGATACAATAACAGCATTCTCATCAGTCACCCATATTTGTCGAGACGTAAACTACGGATGATTGATTC GATACATACACGCAAACGGAGCCTCAATATTCTTTATCTGCCTATTCCTACACATTGGACGAGGAATATA CTATGGATCCTACACTTTCATTGAAACTTGAAATATCGGAGTAATCTTATTATTCGCCGTTATAGCCACT GCATTCATAGGATATGTACTCCCATGAGGACAAATATCATTTTGAGGAGCAACAGTTATTACCAACTTAT TATCAGCCATCCCATACATCGGAACCACACTAGTAGAATGAATCTGAGGGGGATTCTCAGTAGACAAAGC CACTCTAACACGATTTTTTGCCTTTCACTTTATTCTACCATTCATCATCACAGCCATAGTAGTTGTCCAC CTATTATTCCTTCACGAAACAGGGTCTAACAACCCAACAGGACTAAACTCAGACGCAGATAAAATCCCAT TTCACCCATACCATACAATTAAAGACCTCCTAGGCGTATTTATACTAGTACTACTATTTACAACACTAGT ACTATTTTTCCCAGATCTACTAGGAGACCCAGACAATTATTCACCCGCAAACCCATTAAACACACCACCA CACATCCAACCAGAATGATATTTCCTATTTGCATACGCTATCCTACGATCAATTCCTAATAAACTAGGAG GCATTCTAGCCCTAATCATATCTACTTTAATCCTAATACTCCTACCTCTACTACACACATCAAAACAACG AAGCCTGATTTTCCGACCAATTACTCAAACACTATATTGAATTCTAGTTGCAAATCTTTTAATCCTAACT TGAATCGGAGGACAACCAGTCGAACATCCTTTCACCATCATCGGACAGCTAGCCTCCATCAGTTATTTCT CCATTATCCTTGTTTTCATACCTATTTCAGGAATTATTGAAAACAAAATACTAAAATGAGATACATGCCC TGATAGTATAGCCATTACCCTGGTTTTGTAAACCAAAAACGAAGATTATAATCTTCTCAAGGCATCAAGA AGAAGGACTTATCCCTACCATCAACACCCAAAGCTGAAATTCTAATTAAACTACTTCTTGAACAGTACAT AAAATTACATAGTACATTAAAACATTAATGTATATAGTACATTAAATTATTTTCCCCTAGCATATAAGCA AGTATTAACCATTAATGAATTAGGAAATAAAACTATATCTCAACCCACAAATCATAAACACATGAATATT AACAAATACATTTTAATTAATGCTTTAAAAACATATCTGTGTTATTAGACATACACCATTAAGTCATAAA CCCTTATCTTCCACATGACTATCCCCTGCTACATTAATCTAACTATCTACCATCCTCCGTGAAACCAACA ACCCGCCCACCAATGCCCCTCTTCTCGCTCCGGGCCCATAAAACTTGGGGGTAGCTAAACTGAAACTTTA TCAGACATCTGGTTCTTACTTCAGGGCCATCAAAWGCGTTATCGCCCATACGTTCCCCTTAATAAGACAT CTCGATGGTACAGGTCTAATCAGCCCATGCCCAACATAACTGTGGTGTCATGCATTTGGTATTTTTATTC TCTTAGGATGCTGTGACTCAGCATAGCCGTCAAGGCATGAAGGTCAACCCTAAGTCTAGCTGGACTTTCT AGTTAAGCATCATTAACCCACATAAACAAATCACCTAGACTAAATCTTAATGCTAGAAGGACATAATTTA CAACGAATACTGAAAATGAACTCTCCAAACCCCCCCACCCCCAAAAAAACTTTGATGCCAAACCCCAAAA ACATCAAAGCCAAAAATCACCATAAAGACAAATCTTTCAAGTACTCCACAAAATATAACTTATATTTTAG TATTGGTAAAAAAAAACTGAAATAAAAATTTACCTAGCCAAAACTAAAACACCAATATAATCTTAACGAT TTTTTTTAA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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