Viewing data for Plethodon elongatus
| Scientific name | Plethodon elongatus |
| Common name | Del Norte salamander |
| Maximum lifespan | 13.30 years (Plethodon elongatus@AnAge) |
| Total mtDNA (size: 18767 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6794 | 11972 | 4327 | 2467 | 5654 | 6318 |
| Base content per 1 kb (bases) | 362 | 638 | 231 | 131 | 301 | 337 |
| Base content (%) | 36.2% | 63.8% | ||||
| Total protein-coding genes (size: 11336 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4041 | 7294 | 2691 | 1350 | 3590 | 3704 |
| Base content per 1 kb (bases) | 356 | 643 | 237 | 119 | 317 | 327 |
| Base content (%) | 35.6% | 64.3% | ||||
| D-loop (size: 2109 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 776 | 1333 | 488 | 288 | 651 | 682 |
| Base content per 1 kb (bases) | 368 | 632 | 231 | 137 | 309 | 323 |
| Base content (%) | 36.8% | 63.2% | ||||
| Total tRNA-coding genes (size: 1521 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 545 | 976 | 320 | 225 | 433 | 543 |
| Base content per 1 kb (bases) | 358 | 642 | 210 | 148 | 285 | 357 |
| Base content (%) | 35.8% | 64.2% | ||||
| Total rRNA-coding genes (size: 2438 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 922 | 1516 | 508 | 414 | 581 | 935 |
| Base content per 1 kb (bases) | 378 | 622 | 208 | 170 | 238 | 384 |
| Base content (%) | 37.8% | 62.2% | ||||
| 12S rRNA gene (size: 915 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 367 | 548 | 205 | 162 | 208 | 340 |
| Base content per 1 kb (bases) | 401 | 599 | 224 | 177 | 227 | 372 |
| Base content (%) | 40.1% | 59.9% | ||||
| 16S rRNA gene (size: 1523 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 555 | 968 | 303 | 252 | 373 | 595 |
| Base content per 1 kb (bases) | 364 | 636 | 199 | 165 | 245 | 391 |
| Base content (%) | 36.4% | 63.6% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 248 | 436 | 180 | 68 | 220 | 216 |
| Base content per 1 kb (bases) | 363 | 637 | 263 | 99 | 322 | 316 |
| Base content (%) | 36.3% | 63.7% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 49 | 119 | 38 | 11 | 48 | 71 |
| Base content per 1 kb (bases) | 292 | 708 | 226 | 65 | 286 | 423 |
| Base content (%) | 29.2% | 70.8% | ||||
| COX1 (size: 1540 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 584 | 956 | 343 | 241 | 503 | 453 |
| Base content per 1 kb (bases) | 379 | 621 | 223 | 156 | 327 | 294 |
| Base content (%) | 37.9% | 62.1% | ||||
| COX2 (size: 682 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 254 | 428 | 160 | 94 | 205 | 223 |
| Base content per 1 kb (bases) | 372 | 628 | 235 | 138 | 301 | 327 |
| Base content (%) | 37.2% | 62.8% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 294 | 490 | 170 | 124 | 274 | 216 |
| Base content per 1 kb (bases) | 375 | 625 | 217 | 158 | 349 | 276 |
| Base content (%) | 37.5% | 62.5% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 409 | 734 | 272 | 137 | 377 | 357 |
| Base content per 1 kb (bases) | 358 | 642 | 238 | 120 | 330 | 312 |
| Base content (%) | 35.8% | 64.2% | ||||
| ND1 (size: 969 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 337 | 631 | 222 | 115 | 326 | 305 |
| Base content per 1 kb (bases) | 348 | 651 | 229 | 119 | 336 | 315 |
| Base content (%) | 34.8% | 65.1% | ||||
| ND2 (size: 1041 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 360 | 681 | 267 | 93 | 310 | 371 |
| Base content per 1 kb (bases) | 346 | 654 | 256 | 89 | 298 | 356 |
| Base content (%) | 34.6% | 65.4% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 124 | 224 | 83 | 41 | 119 | 105 |
| Base content per 1 kb (bases) | 356 | 644 | 239 | 118 | 342 | 302 |
| Base content (%) | 35.6% | 64.4% | ||||
| ND4 (size: 1375 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 488 | 887 | 332 | 156 | 444 | 443 |
| Base content per 1 kb (bases) | 355 | 645 | 241 | 113 | 323 | 322 |
| Base content (%) | 35.5% | 64.5% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 110 | 187 | 73 | 37 | 104 | 83 |
| Base content per 1 kb (bases) | 370 | 630 | 246 | 125 | 350 | 279 |
| Base content (%) | 37.0% | 63.0% | ||||
| ND5 (size: 1813 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 606 | 1207 | 421 | 185 | 576 | 631 |
| Base content per 1 kb (bases) | 334 | 666 | 232 | 102 | 318 | 348 |
| Base content (%) | 33.4% | 66.6% | ||||
| ND6 (size: 510 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 183 | 327 | 132 | 51 | 89 | 238 |
| Base content per 1 kb (bases) | 359 | 641 | 259 | 100 | 175 | 467 |
| Base content (%) | 35.9% | 64.1% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.41%) 
Alanine (Ala, A)
n = 11 (4.85%) 
Serine (Ser, S)
n = 17 (7.49%) 
Threonine (Thr, T)
n = 20 (8.81%) 
Cysteine (Cys, C)
n = 1 (0.44%) 
Valine (Val, V)
n = 10 (4.41%) 
Leucine (Leu, L)
n = 60 (26.43%) 
Isoleucine (Ile, I)
n = 17 (7.49%) 
Methionine (Met, M)
n = 10 (4.41%) 
Proline (Pro, P)
n = 16 (7.05%) 
Phenylalanine (Phe, F)
n = 12 (5.29%) 
Tyrosine (Tyr, Y)
n = 3 (1.32%) 
Tryptophan (Trp, W)
n = 4 (1.76%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 11 (4.85%) 
Glutamine (Gln, Q)
n = 10 (4.41%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 2 (0.88%) 
Arginine (Arg, R)
n = 4 (1.76%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 4 | 10 | 15 | 7 | 20 | 0 | 17 | 10 | 0 | 2 | 1 | 6 | 1 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 0 | 1 | 5 | 4 | 1 | 3 | 0 | 7 | 0 | 1 | 4 | 11 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 12 | 0 | 4 | 1 | 5 | 0 | 3 | 4 | 2 | 1 | 2 | 1 | 5 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 36 | 76 | 67 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 57 | 36 | 109 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 47 | 113 | 62 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPGPWFIILFMSWLIYMTIISPKINKFKMSHQPTTQNINKDKPQPWNWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 4 (7.27%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 3 (5.45%)
Isoleucine (Ile, I)
n = 7 (12.73%)
Methionine (Met, M)
n = 4 (7.27%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 1 (1.82%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 4 (7.27%)
Histidine (His, H)
n = 1 (1.82%)
Lysine (Lys, K)
n = 5 (9.09%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 0 | 3 | 0 | 1 | 2 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 3 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 1 | 4 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 2 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 2 | 16 | 25 | 13 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 15 | 18 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 7 | 28 | 18 | ||||||||||||
| COX1 (size: 1540 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.98%)
Alanine (Ala, A)
n = 41 (8.01%)
Serine (Ser, S)
n = 33 (6.45%)
Threonine (Thr, T)
n = 37 (7.23%)
Cysteine (Cys, C)
n = 1 (0.2%)
Valine (Val, V)
n = 39 (7.62%)
Leucine (Leu, L)
n = 61 (11.91%)
Isoleucine (Ile, I)
n = 36 (7.03%)
Methionine (Met, M)
n = 33 (6.45%)
Proline (Pro, P)
n = 28 (5.47%)
Phenylalanine (Phe, F)
n = 40 (7.81%)
Tyrosine (Tyr, Y)
n = 18 (3.52%)
Tryptophan (Trp, W)
n = 17 (3.32%)
Aspartic acid (Asp, D)
n = 15 (2.93%)
Glutamic acid (Glu, E)
n = 9 (1.76%)
Asparagine (Asn, N)
n = 16 (3.13%)
Glutamine (Gln, Q)
n = 7 (1.37%)
Histidine (His, H)
n = 19 (3.71%)
Lysine (Lys, K)
n = 9 (1.76%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 8 | 31 | 23 | 2 | 21 | 0 | 14 | 7 | 0 | 8 | 3 | 25 | 3 | 32 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 8 | 18 | 14 | 1 | 11 | 13 | 19 | 3 | 4 | 5 | 17 | 2 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 19 | 1 | 8 | 3 | 17 | 1 | 1 | 3 | 12 | 6 | 0 | 1 | 9 | 7 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 8 | 1 | 9 | 6 | 9 | 0 | 1 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 150 | 108 | 135 | 120 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 135 | 93 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 100 | 225 | 173 | ||||||||||||
| COX2 (size: 682 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 15 (6.64%)
Serine (Ser, S)
n = 19 (8.41%)
Threonine (Thr, T)
n = 14 (6.19%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 14 (6.19%)
Leucine (Leu, L)
n = 24 (10.62%)
Isoleucine (Ile, I)
n = 19 (8.41%)
Methionine (Met, M)
n = 18 (7.96%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 10 (4.42%)
Tyrosine (Tyr, Y)
n = 8 (3.54%)
Tryptophan (Trp, W)
n = 5 (2.21%)
Aspartic acid (Asp, D)
n = 10 (4.42%)
Glutamic acid (Glu, E)
n = 11 (4.87%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 8 (3.54%)
Lysine (Lys, K)
n = 3 (1.33%)
Arginine (Arg, R)
n = 6 (2.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 6 | 15 | 7 | 5 | 6 | 0 | 5 | 8 | 1 | 8 | 0 | 6 | 0 | 9 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 5 | 4 | 5 | 1 | 1 | 2 | 4 | 1 | 0 | 5 | 7 | 2 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 7 | 0 | 5 | 1 | 9 | 0 | 1 | 3 | 6 | 2 | 0 | 1 | 5 | 5 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 10 | 1 | 6 | 4 | 3 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 55 | 68 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 58 | 59 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 47 | 96 | 74 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 20 (7.69%)
Serine (Ser, S)
n = 16 (6.15%)
Threonine (Thr, T)
n = 20 (7.69%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 19 (7.31%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 6 (2.31%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 14 (5.38%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 2 | 8 | 8 | 3 | 5 | 0 | 15 | 7 | 0 | 6 | 5 | 8 | 0 | 16 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 7 | 2 | 10 | 1 | 3 | 3 | 12 | 2 | 4 | 2 | 5 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 9 | 0 | 7 | 2 | 3 | 0 | 2 | 2 | 6 | 4 | 1 | 0 | 5 | 0 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 7 | 2 | 3 | 3 | 2 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 53 | 59 | 75 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 63 | 53 | 103 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 54 | 104 | 95 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 21 (5.53%)
Serine (Ser, S)
n = 25 (6.58%)
Threonine (Thr, T)
n = 26 (6.84%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.74%)
Leucine (Leu, L)
n = 56 (14.74%)
Isoleucine (Ile, I)
n = 37 (9.74%)
Methionine (Met, M)
n = 17 (4.47%)
Proline (Pro, P)
n = 23 (6.05%)
Phenylalanine (Phe, F)
n = 30 (7.89%)
Tyrosine (Tyr, Y)
n = 15 (3.95%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 8 (2.11%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 18 (4.74%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 13 (3.42%)
Lysine (Lys, K)
n = 11 (2.89%)
Arginine (Arg, R)
n = 7 (1.84%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 10 | 16 | 13 | 6 | 16 | 2 | 19 | 8 | 0 | 5 | 2 | 11 | 0 | 24 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 4 | 8 | 9 | 0 | 5 | 6 | 14 | 0 | 3 | 1 | 16 | 3 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 7 | 0 | 4 | 3 | 15 | 1 | 0 | 2 | 9 | 6 | 1 | 0 | 7 | 11 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 1 | 4 | 4 | 11 | 0 | 1 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 79 | 88 | 111 | 103 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 49 | 93 | 81 | 158 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 91 | 165 | 116 | ||||||||||||
| ND1 (size: 969 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.59%)
Alanine (Ala, A)
n = 26 (8.07%)
Serine (Ser, S)
n = 25 (7.76%)
Threonine (Thr, T)
n = 19 (5.9%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 13 (4.04%)
Leucine (Leu, L)
n = 63 (19.57%)
Isoleucine (Ile, I)
n = 25 (7.76%)
Methionine (Met, M)
n = 19 (5.9%)
Proline (Pro, P)
n = 21 (6.52%)
Phenylalanine (Phe, F)
n = 22 (6.83%)
Tyrosine (Tyr, Y)
n = 11 (3.42%)
Tryptophan (Trp, W)
n = 7 (2.17%)
Aspartic acid (Asp, D)
n = 3 (0.93%)
Glutamic acid (Glu, E)
n = 11 (3.42%)
Asparagine (Asn, N)
n = 12 (3.73%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 4 (1.24%)
Lysine (Lys, K)
n = 7 (2.17%)
Arginine (Arg, R)
n = 8 (2.48%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 4 | 17 | 9 | 6 | 21 | 2 | 25 | 6 | 0 | 4 | 1 | 8 | 0 | 20 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 3 | 10 | 13 | 0 | 4 | 3 | 11 | 0 | 1 | 6 | 14 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 8 | 0 | 5 | 6 | 10 | 0 | 1 | 3 | 9 | 2 | 0 | 0 | 8 | 4 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 10 | 1 | 2 | 1 | 7 | 0 | 1 | 0 | 7 | 0 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 77 | 86 | 88 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 87 | 55 | 142 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 57 | 164 | 95 | ||||||||||||
| ND2 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 27 (7.8%)
Serine (Ser, S)
n = 27 (7.8%)
Threonine (Thr, T)
n = 30 (8.67%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 33 (9.54%)
Methionine (Met, M)
n = 35 (10.12%)
Proline (Pro, P)
n = 24 (6.94%)
Phenylalanine (Phe, F)
n = 9 (2.6%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 11 (3.18%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 31 | 2 | 33 | 12 | 9 | 21 | 2 | 19 | 10 | 0 | 2 | 0 | 5 | 0 | 7 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 4 | 12 | 11 | 0 | 1 | 5 | 8 | 0 | 3 | 10 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 17 | 0 | 7 | 5 | 11 | 0 | 1 | 3 | 6 | 2 | 0 | 0 | 12 | 8 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 1 | 1 | 11 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 87 | 133 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 104 | 62 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 76 | 176 | 91 | ||||||||||||
| ND3 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 27 (7.8%)
Serine (Ser, S)
n = 27 (7.8%)
Threonine (Thr, T)
n = 30 (8.67%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 33 (9.54%)
Methionine (Met, M)
n = 35 (10.12%)
Proline (Pro, P)
n = 24 (6.94%)
Phenylalanine (Phe, F)
n = 9 (2.6%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 11 (3.18%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 31 | 2 | 33 | 12 | 9 | 21 | 2 | 19 | 10 | 0 | 2 | 0 | 5 | 0 | 7 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 4 | 12 | 11 | 0 | 1 | 5 | 8 | 0 | 3 | 10 | 11 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 17 | 0 | 7 | 5 | 11 | 0 | 1 | 3 | 6 | 2 | 0 | 0 | 12 | 8 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 1 | 1 | 11 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 87 | 133 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 104 | 62 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 76 | 176 | 91 | ||||||||||||
| ND4 (size: 1375 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (5.25%)
Alanine (Ala, A)
n = 29 (6.35%)
Serine (Ser, S)
n = 32 (7.0%)
Threonine (Thr, T)
n = 45 (9.85%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 11 (2.41%)
Leucine (Leu, L)
n = 87 (19.04%)
Isoleucine (Ile, I)
n = 40 (8.75%)
Methionine (Met, M)
n = 39 (8.53%)
Proline (Pro, P)
n = 26 (5.69%)
Phenylalanine (Phe, F)
n = 20 (4.38%)
Tyrosine (Tyr, Y)
n = 12 (2.63%)
Tryptophan (Trp, W)
n = 14 (3.06%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 10 (2.19%)
Asparagine (Asn, N)
n = 17 (3.72%)
Glutamine (Gln, Q)
n = 12 (2.63%)
Histidine (His, H)
n = 10 (2.19%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 10 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 34 | 6 | 36 | 18 | 10 | 23 | 2 | 28 | 11 | 1 | 2 | 3 | 6 | 0 | 16 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 4 | 3 | 19 | 7 | 0 | 3 | 5 | 14 | 2 | 5 | 6 | 15 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 19 | 1 | 11 | 6 | 7 | 1 | 2 | 5 | 11 | 1 | 2 | 6 | 13 | 4 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 8 | 2 | 1 | 1 | 13 | 0 | 1 | 2 | 7 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 111 | 161 | 110 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 60 | 125 | 76 | 197 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 20 | 96 | 206 | 136 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 5 (5.1%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 14 (14.29%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 26 (26.53%)
Isoleucine (Ile, I)
n = 0 (0%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 1 (1.02%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 0 | 0 | 6 | 8 | 1 | 6 | 2 | 8 | 2 | 0 | 1 | 0 | 0 | 1 | 4 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 3 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 5 | 1 | 4 | 2 | 2 | 0 | 2 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 1 | 2 | 1 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 15 | 26 | 27 | 31 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 12 | 28 | 16 | 43 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 19 | 40 | 30 | ||||||||||||
| ND5 (size: 1813 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.64%)
Alanine (Ala, A)
n = 40 (6.63%)
Serine (Ser, S)
n = 53 (8.79%)
Threonine (Thr, T)
n = 53 (8.79%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 14 (2.32%)
Leucine (Leu, L)
n = 87 (14.43%)
Isoleucine (Ile, I)
n = 63 (10.45%)
Methionine (Met, M)
n = 50 (8.29%)
Proline (Pro, P)
n = 27 (4.48%)
Phenylalanine (Phe, F)
n = 39 (6.47%)
Tyrosine (Tyr, Y)
n = 10 (1.66%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 10 (1.66%)
Glutamic acid (Glu, E)
n = 12 (1.99%)
Asparagine (Asn, N)
n = 37 (6.14%)
Glutamine (Gln, Q)
n = 20 (3.32%)
Histidine (His, H)
n = 10 (1.66%)
Lysine (Lys, K)
n = 25 (4.15%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 46 | 17 | 45 | 24 | 12 | 21 | 3 | 27 | 18 | 2 | 3 | 4 | 7 | 0 | 31 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 4 | 9 | 14 | 17 | 0 | 4 | 6 | 16 | 2 | 3 | 7 | 17 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 28 | 1 | 11 | 11 | 20 | 1 | 3 | 7 | 9 | 1 | 0 | 0 | 20 | 17 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 11 | 1 | 6 | 4 | 23 | 2 | 1 | 1 | 7 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 104 | 126 | 238 | 136 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 64 | 163 | 124 | 253 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 132 | 269 | 186 | ||||||||||||
| ND6 (size: 510 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (11.83%)
Alanine (Ala, A)
n = 14 (8.28%)
Serine (Ser, S)
n = 13 (7.69%)
Threonine (Thr, T)
n = 4 (2.37%)
Cysteine (Cys, C)
n = 4 (2.37%)
Valine (Val, V)
n = 22 (13.02%)
Leucine (Leu, L)
n = 29 (17.16%)
Isoleucine (Ile, I)
n = 12 (7.1%)
Methionine (Met, M)
n = 9 (5.33%)
Proline (Pro, P)
n = 3 (1.78%)
Phenylalanine (Phe, F)
n = 13 (7.69%)
Tyrosine (Tyr, Y)
n = 7 (4.14%)
Tryptophan (Trp, W)
n = 4 (2.37%)
Aspartic acid (Asp, D)
n = 3 (1.78%)
Glutamic acid (Glu, E)
n = 5 (2.96%)
Asparagine (Asn, N)
n = 4 (2.37%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (1.78%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 0 | 5 | 6 | 0 | 1 | 0 | 16 | 0 | 0 | 11 | 1 | 5 | 5 | 12 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 4 | 0 | 9 | 1 | 3 | 1 | 7 | 0 | 4 | 9 | 2 | 0 | 1 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 1 | 9 | 0 | 2 | 1 | 1 | 0 | 6 | 1 | 4 | 6 | 4 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 3 | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 13 | 31 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 33 | 19 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 35 | 5 | 39 | 91 | ||||||||||||
| Total protein-coding genes (size: 11354 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 224 (5.92%)
Alanine (Ala, A)
n = 255 (6.74%)
Serine (Ser, S)
n = 279 (7.38%)
Threonine (Thr, T)
n = 295 (7.8%)
Cysteine (Cys, C)
n = 28 (0.74%)
Valine (Val, V)
n = 171 (4.52%)
Leucine (Leu, L)
n = 614 (16.23%)
Isoleucine (Ile, I)
n = 325 (8.59%)
Methionine (Met, M)
n = 256 (6.77%)
Proline (Pro, P)
n = 211 (5.58%)
Phenylalanine (Phe, F)
n = 237 (6.27%)
Tyrosine (Tyr, Y)
n = 107 (2.83%)
Tryptophan (Trp, W)
n = 109 (2.88%)
Aspartic acid (Asp, D)
n = 65 (1.72%)
Glutamic acid (Glu, E)
n = 91 (2.41%)
Asparagine (Asn, N)
n = 158 (4.18%)
Glutamine (Gln, Q)
n = 98 (2.59%)
Histidine (His, H)
n = 92 (2.43%)
Lysine (Lys, K)
n = 91 (2.41%)
Arginine (Arg, R)
n = 68 (1.8%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 259 | 66 | 228 | 150 | 64 | 171 | 15 | 197 | 93 | 5 | 53 | 20 | 88 | 10 | 186 | 51 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 28 | 14 | 14 | 55 | 95 | 99 | 6 | 44 | 46 | 115 | 19 | 28 | 48 | 127 | 8 | 62 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 93 | 135 | 5 | 76 | 41 | 107 | 5 | 17 | 33 | 80 | 27 | 10 | 17 | 94 | 64 | 41 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 51 | 76 | 15 | 38 | 27 | 89 | 2 | 8 | 12 | 48 | 0 | 0 | 1 | 6 | 1 | 99 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 806 | 869 | 1176 | 931 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 480 | 990 | 709 | 1603 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 147 | 752 | 1678 | 1205 | ||||||||||||
>NC_006335.1 Plethodon elongatus mitochondrion, complete genome GCTAGTGTAGCTTACTAAAGCACGGCACTGAAAATGCCAAGACAGATAATAATAAATCTCACAAGCATTA AAGGTTTGGTCCCAGCCTTAGTATTAATTTTAATTATAATTATACATGCAAGCTTCAACCACCCCGTGAG AATGCCCACTACTTCTACCTAGATGTAGGGGGAGCCGGTATCAGGCAATATAGCCCACAACACCTTGCTA AGCCACACCTATACAGGAATTCAGCAGTAATAAACATTGAACAATGAGCGACAGCCCGATTCAGCAATAA TTAAATAAGGCCGGTAAATCTCGTGCCAGCCACCGCGGTTATACGAAAGACCTAAATTAATACATGCGGC CCAAAGGGTAGTTAAAGATAATTAAAATTGAATTAAAAGCTCACCCAGCCGTTATACGCAAAGCAAGCCA CAGACTCAACAACGAAAGCGATTCTATAAATACTTGAATCTACTACAACCGAGAAACAAACTAGGATTAG ATACCCTACTATGCTCGATCATAAACTTAGACACCCCGCCAGAGAACTACGAGCTACAGCTTAAAACTCA AAGGACTTGGCGGTGCTCCACACCCACCTAGAGGAGCCTGTTCTATAATCGATATTCCCCGATAAACCTC ACCACCTTTTGCCAATACAGCCTATATACCACCGTCCCAGCTTACCCCTCAAAAGAATAATAGTGAGCAA AATAATTTAAAATAAAAAAGTCAGGTCAAGGTGTAGCATATAAGGTGGAAAGAAATGGGCTACATTTTCC TTACGAAAATACGAAATATTTAATGAAACTTAAATATGAAGGAGGATTTAGAAGTAAAGAGGAAAAAGAG TGTTCTCTTTAAATCGGCAATAGAGCACGCACACACCGCCCGTCACCCTCTCCAAGAACATAATCAATTA AATAAATATATAATTAAATAAGAAGAGGAAAGTCGTAACATGGTAAGCCTACCGGAAGGTGGTCTTGGAT ATCAGAATATAGCTTAAATAAAGCATCTTAATTACACCAAGAAAATATTTATTGACTTAAATTATTCTGA ATCTTAACTTTAGCCTATATACTTTTACATTTACTTTTTTCCCCCCAAATCATTTTTATATATTAGTATG GGCGACAGAAAATTTTTTAGCGCAATAGACAATAGTACTACAAAGGAAAAATGAAATAGAAATGAAATAA ACCATAAAAATACAAAAAAGCAATGACAAAAACCTTTACCTTTTGCATAATGGTCTAGCCAGTCTACACT AACAAAAAGACCTTAAGTTAGATATCCCGAAACCAGGCGAGCTACCTCAAGACAGCAATATATGAGCGAA CCCGTCTCTGTAGCAAAAGAGTGGGAAGACCTTGAGATAGAGGCGAAAAACCTAACGAGCCCGGATATAG CTGGTTACTTGAGAATGAATTTAAGTTCAACTAAAAGCACCGCCATCACACAAAGAACGCTTTTATTATA ATTAATTGGGGTACAGCCCAATTAATAAAGGAAACAACCTAAATAAATGAATAAAGATTATAATATGCTT AAAATTTAATGACTGTGGGCCTAAAAGCAGCCACCACCAAAAGCGTCAAAGCTTAACTTATAAATACTTA TTATACCAATAGACAATCCCAATTCACCAAAAAAATCAAGTAAATTTATAATATAAATAAATTACTGCTA GAATGAGTAACAAGGAGTGACCTCTATAATATATGTGTAAATCAAAATGAACAAATCACTGATAATTAAC AAAAATATTTTAATAATATATACAAAATGTTAACCCAACACAGGAATATTTAAGAAAGATTTTAAATCTA GAAAGGAACTCGGCAAAAAGAGCTTCGCCTGTTTACCAAAAACATCGCCTCTTGCTAAACTAATATAAGA GGTACTGCCTGCCCAGTGACACCTGTTCAACGGCCGCGGTATTATGACCGTGCAAAGGTAGCGTAATCAC TTGCCCCTTAAATGAGGGCCAGTATGAATGGCAAAACGAGAGCCCAACTGTCTCCCTAGATCAATCAGTG AAATTGATATCCTCGTGCAGAAGCGAGGATAGTTATATAAGACGAGAAGACCCTGTGGAGCTTTAAACCT AATCTAATTATACCCAATATAATTAAAGTAAATAATATAGCACAAGGTCTTAGGTTGGGGCGACCCCGGG GTCAAATAAAACCCCCGGAATAATAAACCAAGAAAAACACTTCAAAACAACAGTAAAACTGATATAATTG ACCCAATAATTGATCAACGAACCAAGTTACCCCAGGGATAACAGCGCAATCTACTCTTAGAGTCCCTATC GACGAGCAGGTTTACGACCTCGATGTTGGATCAGGACCCCCAAATGGTGCAGCAGCTATTAAAGGTTCGT TTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTATA AATAGTTTCTCCTAGTACGAAAGGACCGGAAAAACAAGGCCCATAAAAAACTTACGCCTTCCCATCTACC CCTAAAACCAAATGAAGGGGAAAAAATCAAAAAATTAAGTTTAGACATGACTTATTAGGGTGGCAGAGCC CGGTAATTGCAAAAGATCTAAAATCTTTATACCAAAAGTTCAAATCTTTTCCCTAATAATGAATACCCTA TTAATTATTGTAATTAATCCCCTACTTTACGCTTTTCCCGTATTATTAGCAGTAGCTTTTTTAACCCTTG TTGAACGAAAAATCTTAGGATATATACAATTTCGTAAAGGCCCAAATATTGTTGGACCTCTAGGACTATT ACAACCAATTGCAGACGGACTCAAACTATTTATTAAAGAACCAATTCGACCATCAACCTCATCCCAAACT ATATTTTTATTAATACCAATAATAGCCCTTACCCTATCTTTATTAATTTGAATTCCACTCCCCCTCCCAA ATATATTATCAAATCTAAATTTAGGTATTCTTTTTATACTTGCCCTATCTAGCCTAACTGTTTACTCAAT CCTTGGATCCGGATGAGCCTCAAACTCTAAATATGCCCTAATTGGAGCCCTCCGAGCAGTAGCACAAACA ATTTCATATGAGGTAGCACTCGGATTAATTTTATTATGCCTAATTCTGATGGCAGGAGGTTTTATATTAT TAAACTTTAGCACAACACAAGAATATATATGATTTCTAATACCAGCCTGACCATTAGCTGCCATATGATT TATTTCAACCCTAGCAGAAACTAACCGAGCACCCTTTGATTTAACAGAAGGTGAATCCGAACTAGTATCC GGATTTAACGTTGAATATGCAGGCGGACCATTTGCCCTCTTCTTCCTAGCAGAATATGCAAATATTCTGA TAATAAATGTATTAACAACCATCCNTTTTTTAGGCACAACTTTTTATCATCTACATCCAGAATTTTCAAC AATTAGTTTACTTATTAAAGCCTCCTCCCTATCAATTATATTTTTATGAATCCGAGCCTCTTATCCACGA TTTCGATATGATCAATTAATACATCTTGTATGAAAAAGCTTTCTACCAATTACAGTCGCAATAACCCTAC TTCACCTATCTTTTCCAATTATATTAGGTCTACCCCCCGCATCATAGGATATGTGCCCGAAAACTAAGGC TCACCTTGATAGGGTGAATTATAGAGGTTCAAATCCCCTCATATCCTAAAAAAACAGGACTCGAACCCGC CCTCTGAAGATCAAAACTTCAAGTGCATCCACTACACTACTTCTTAGTAAAATAAGCTAAAATAAGCTTT TGGGCCCATACCCCAAAAATGTTGGTTTAAACCCCTCTTTTACTAATGAGCCCATATGCTATATCAATAC TATTATCAAGTCTCTCTACCGGTACACTAATTACTCTTATTAGCAACCACTGATTTCTCGCTTGAATTGG CCTAGAATTAAATACACTAGCAATTATTCCCCTAATATCTAAAATACACCACCCACGAGCAACAGAAGCA GCCATTAAATATTTCTTAATTCAATCCATAGCATCTGCCCTCCTCCTATTTGCAACAACACTAAATGCCT GATATACCGGAGAATGAACAATTATTAATATACAAACTACCCTTCCAACACTTATATTAACAACAGCTTT AATAATAAAATTAGCAGTAGCCCCATTTCACCTTTGACTCCCAGATGTAATTCAAGGACTTGACCTAACA GCCTGCATGATTTTATTAACATGACAAAAACTTGCCCCCATAGCACTCCTGTTCCAAGCAGGACCAAACA TAAACCCAATATTAATAGTTCTTTTAGGCACCCTCTCCCTCCTAGTAGGAGGCTGAGGCGGATTAAATCA ACCCCAAATCCGCAAAATTATAGCCTACTCTTCTATTGCCCACCTAGGATGAATAATTATTGTAATATCA TATCTTCCAAATCTAGCACTACTTAATCTACTAGTATATTTATTAATAAATATAGCTATATTTATAATAA TTATTAATCTTTCATCAACTAACATCAACAAAATAGCCTCCTCATGAATAAAAAATCCCCCCCTTACCTC AGCAATAATAATTATTTTAATATCCTTAGGAGGCCTCCCTCCCCTAACCGGATTTTTACCAAAATGATTA ATTCTAGAAGAAATTGTTAAACAAAACATAACCCCCATTGCCACAATAGCAGCCATTTCTGCCCTACTGA GCCTATTTTTTTACCTACGCCTATCCTATACAACATCTCTTACAAATCCACCCACCCCTCAAAATTCAAA AATTATATGACGACTAAAAACAAACCCCAACCAAATTATACCTATAACAATTATTATTTCAACTATAATT TTACCAATTTCACCCTCAATTATAAATTTAACCTAAAGATTTAAGTTAAAAGACTAAGGACCTTCAAAGC CCTAAGTAGAAGTTAAAATCCTCTAATCTTTGATTAAGACTTGTAAGACTTTATCTTACATCCCCTGAAT GCAACCCAGATACTTTTATTAAGCTAAAACCTTACTAGATTAACAGGCTTTTATCCTGCGACCTTTTAGT TAACAGCTAAAAACCCAAACAACGGGCTTTAATCTACTTCTCCCGCTTTGTGGGGGGGAAAAAGCGGGAG AAGCCCCGGCAGATGTCATCCTGCTCTTTGAAGCTTGCAACTTCATATGCTGTACATTACAGAACTTGAT AAAGAAAGGATTAAACCTTCATTGCCGAGGCTACAACTCGGTGCCTACTTCAGCCACTTTACCCGTGATA ATTACTCGATGACTTTTCTCAACAAACCACAAAGACATCGGCACCCTATACTTAATGTTTGGTGCCTGAG CTGGAATAGTAGGCACGGCCCTTAGTCTACTAATTCGAGCAGAACTTAGCCAACCCGGAGCCCTACTAGG AGATGATCAAATCTACAATGTAATTGTAACCGCTCATGCATTTGTGATAATTTTTTTTATAGTAATACCA GTCATAATTGGGGGGTTTGGCAACTGATTACTTCCACTTATAATTGGTGCCCCAGATATAGCCTTCCCAC GAATAAATAATATAAGCTTTTGACTTCTTCCCCCTTCCCTTCTACTACTTCTCGCCTCTTCTGGAGTAGA AGCAGGTGCTGGCACCGGCTGAACTGTATATCCCCCACTAGCAGGAAATATAGCACACGCCGGGGCCTCA GTAGATTTAACCATCTTCTCACTTCATCTAGCTGGTGTATCATCTATCTTAGGCGCTATCAACTTTATTA CAACTTCTATTAATATAAAACCCCCATCAATATCACAATATCAAACCCCACTATTTGTATGATCTGTTCT TATTACTGCCATTCTACTACTACTTTCATTGCCTGTTTTAGCAGCAGGTATTACTATACTACTTACAGAC CGAAATCTTAATACAACATTTTTTGATCCAGCGGGTGGAGGAGATCCAGTACTTTACCAACACCTATTTT GATTTTTTGGTCACCCAGAAGTTTATATTCTTATTCTACCCGGCTTTGGAATAATTTCTCACATTGTTGT ATATTATTCAGCCAAAAAAGAACCATTTGGATATATAGGCATGGTTTGAGCAATAATATCAATTGGCCTC TTAGGATTTATTGTATGAGCCCATCATATATTTACTGTAGACCTTAATGTTGATACACGAGCATATTTTA CATCAGCCACAATAATTATTGCTATTCCTACAGGAGTAAAAGTATTTAGCTGATTAGCAACAATACATGG AGGAAACATCAAATGAGATGCAGCTATACTTTGAGCCCTAGGATTTATTTTCCTTTTCACTGTCGGAGGT TTAACCGGTATTGTATTAGCCAACTCCTCCTTAGATATTGTCCTACATGACACTTACTATGTAGTAGCCC ATTTTCACTATGTGTTATCAATAGGTGCCGTTTTTGCTATTATAGGCGGCTTTGTACACTGATTTCCACT ATTTTCAGGTTTTACACTTCACCCAACATGATCAAAAATTCACTTTGGAGTAATATTTATTGGAGTAAAC TTAACCTTCTTTCCACAACATTTCTTAGGACTTGCAGGCATACCACGTCGATACTCGGACTACCCGGACG CCTATACTCTTTGAAATACAGTATCATCAATAGGATCACTAATCTCACTTGTAGCAGTTATAATAATAAT ATTTATTATTTGAGAAGCCTTCGCATCTAAACGAGAGGTATTAACTACAAAATTTACAACAACAAACATC GAATGACTACACGGCTGTCCTCCACCATATCACACATTTGAAGAACCGTCTTATGTACAAACATACAAGG AGAGAGGGAATTGAACCCCCTTATGCTAATTTCAAGTCAGCCACATAACCAATCTGTCCCCCCCTTAGAT ATTAGTAAAATAATTACAAAGCCTTGTCATGGCCTAATTATAAGTTAAAACCTTATATATCTATATGGCA CACCCGTCACAATTAGGCTTTCAAGATGCAGCCTCTCCCATTATAGAAGAACTTCTCCATTTTCATGATC ATGCCCTTATAGCAGTATTTTTAATTAGCACTCTTGTACTTTATATTATTTCAGTTATGATAACAACAAA ATTAACTAATACTAGTGCAATAGATGCTCAAGAAATTGAAATGGTTTGAACCATCATACCAGCTGTTATC CTTGTTGTTATTGCCCTCCCATCACTACGAATTCTTTACCTTATAGATGAAATCAATGACCCCCATCTCA CAGTTAAAGCTATTGGACACCAATGATACTGAAGCTATGAATTTACAAATTATAATGACCTCATATTTGA CTCATATATATTACCAACACAAAACCTCATACCAGGCCAATTTCGACTACTAGAAGTAGATAACCGAATA GTTGTTCCAATAGAATCTCCAATTCGAATATTGATTTCAGCTGAAGATGTATTACACTCCTGAGCGATCC CCTCAATAGGAATTAAAACAGACGCCATCCCCGGTCGACTAAATCAAACAACCTTTATCTCATCACGACC AGGAACCTTTTATGGGCAGTGTTCTGAGATTTGCGGAGCTAACCACAGCTTTATACCGATTGTAGTAGAA GCAACCCCCCTAAACTATTTCCAAAACTGATCATCTTCTATACTAGACTCCTCATTAAGAAGCTTTCATG GACAAGCAACAGCCTTTTAAGCTGTAGTTCGGTGCCTCCAAACACCCTTAATGATATGCCTCAACTCAAC CCAGGCCCCTGATTTATTATTCTATTTATATCATGACTAATTTATATAACCATTATTTCACCAAAAATTA ATAAATTTAAAATATCACATCAGCCAACAACACAAAATATTAATAAAGATAAACCTCAACCATGAAACTG ACCGTGAACCTAAGCTTCTTTGACCAATTCATAAGCCCCTCACTCTTAGGAATACCCCTTATTACTTTAT CCTTAATTTTCCCCTGTATATTAATCTTAAGTCCTAATAATCAATGGCTAGGAAACCGCCTATTCTCTTT ACAACTTTGATTCTCACATAGTTTTACTAAACAACTTATAAGCCCACTCAACCAAAACGGACATAAATGA TCACTTCTACTAGCCTCTTTAATAATACTTCTACTCTCTGTAAACCTATTAGGTCTACTCCCATATACTT TTACCCCAACAACACAACTCTCAATAAACTTAGGACTTGCTATACCACTATGGTTAGCCACAGTACTTAC TGGACTACGAAATCAACCAACTACATCTCTAGGACACCTTCTACCAGAAGGTACACCAACCCCATTAATT CCAATTCTTATTATAATTGAAACAATTAGCCTATTCATCCGACCCTTAGCCCTTGGAGTACGACTAACAG CAAATCTAACAGCGGGTCACCTCTTAATTCAACTTATTTCAGTTGCAATCTTTACACTTCTACCACTTTT ACCAACAATTGCCATCTTGACAACAGTAATTCTTTTTCTTTTAGTTCTACTAGAGATTGCAGTAGCAATA ATTCAAGCCTATGTCTTCGTACTATTATTAAGTCTCTACCTACAAGAAAATACCTAATGGCACACCAAGC GCACGCTTTTCACATAGTTGACCCCAGCCCTTGACCTTTAACAGGAGCTATTGCAGCACTATTATTAACA TCTGGCTTAGCAATATGGTTTCACTTCGGGTCTACTATATTAATAAATTTAGGATTAATTATTATAATTT TAACAATAATTCAATGATGACGAGATATTGTACGAGAAAGCACATTTCAAGGACATCATACTACCCCTGT ACAAAAAGGACTCCGCTACGGAATAATTTTATTTATTACCTCTGAAGTCTTATTTTTTTTCGGATTTTTC TGAGCTTTCTATAATTCTAGTCTTGCACCAACTCCTGAACTTGGAGAATATTGACCACCAACAGGAGTTA TTCCACTTGACCCATTTGAGGTTCCCTTATTAAATACAGCAGTCCTATTAGCATCTGGTGTAACTGTTAC ATGAGCACATCATAGTATTATGGTAGGTAATCGCAAAGAGGCCATCCAATCCTTATTTTTAACAGTTATA CTTGGTCTATACTTTACTGTACTTCAAGCTACAGAATATTATGAAACCTCATTTGCTATTGCAGATGGAG TATACGGCTCAACTTTTTTTGTCGCAACCGGCTTCCACGGACTCCACGTAATTATTGGGTCTATTTTCCT TCTAATCTGCCTCCTTCGCCAAATTAATTTTCATTTCACTTCTGATCACCACTTCGGATTTGAAGCTGCT GCCTGATACTGACACTTTGTAGACGTTGTCTGACTATTCCTTTATGTCTCAATTTATTGATGAGGATCCT GTCTTTTTAGTATAAAATATAGATGACTTCCAATTATCAGATCTTAGCTAAAACCTAAGAAAAGACAATG AGCCTTATTCCATTAATAATAATTGTTACAACCCTTATCTCCATTATTTTGATTATTATTGGATTTTGAT TACCAATCAATATCCCAGACGCAGAAAAACTTTCACCATATGAATGTGGATTTGATCCACTGGGATCTGC ACGCCTCCCATTTTCAATTCGATTTTTTCTAATTGCAATCCTATTTCTCCTATTTGATTTAGAAATTGCC CTTCTACTACCCACCCCATGAGCTACCCAAATAATTCCAACTAATACACTAATCTGATCAACCACTATCC TATTACTTCTTACCCTGGGTCTTGTATATGAATGAATCCAAGGAGGCCTAGAATGAGCACAATAAGTATT TAGTCTAAAAGACCATTGATTTCGACTCAATAAATTCAGGTTAAAACCCAGAAATACTTTATGTCTCTAA TACTTTTTATATTATATTCAACATTCCTACTTAGTGTGTTCGGATTTACTCTTCATCGAACCCACCTGCT TTCAGCTTTACTTTGTCTGGAGGGAATGATATTAGCACTATTTTTAACGATATCCCTCTGAACAAAACAA TTAGAAACCACATCTTACTTTTCTCTACCACTACTTTTATTGACCTTCTCTGCCTGTGAGGCAAGTACTG GTTTATCCCTAATAGTTGCGACCACCCGCACACACGGCACAGATCACCTTAAAACCCTTAATATATTACA ATGTTAAAAATTATTATCCCAACAACAATAATAATTCCTATAATTTGATTATCGCCTATAAAATGACTTT GACTTAACACTATCATTAATAGTCTAGCTATTGCCTCTATAAGCCTAACGCTATTTATACTCCCCCTAGA ATTTATGATTAAAACAAATAAATATTTGGGACTTGACCAAATTTCTTCCCCACTATTAACCTTAACCTGC TGACTACTTCCTTTAATAATTTTGGCTAGCAAAAATCACCTAAAAAATAATCCCCTAGGCCGCCAACAAA TATATATTTCAATATTGACAACCTTGCAGATTATACTTGTACTTGCATTTTCTCCAACAGAACTTACATT ATTTTATATTACCTTTGAGGCAACTTTAATCCCAACTTTAATTATTATTACCCGTTGAGGTAATCAAACA GAACGCCTTAGCGCAGGAACATATTTTTTATTTTATACCCTTGCCGGATCCTTACCCCTCCTAGTTGCCC TCCTCCTAATAAACACTACCACTAATACACTATCCATAGGATTATTATTCTCCTCCCCCCAAATATTTAT AATAACCTCTACAAATAATATTCTCTGATTTGGATGTCTCTCAGCATTTATAGTTAAAATACCACTCTAT GGAGCCCATTTATGATTGCCAAAAGCCCATGTCGAAGCCCCAGTAGCAGGCTCTATAATTTTAGCCGCCG TATTACTAAAACTAGGAGGATATGGTATTATTCGAATTACACTAATATTTACACCATTAATTGAATTATC CTACCCATTCATTATTCTAGCCTTATGGGGTATTTTAATAACTGGCCTAATTTGCACCCGACAAACTGAT CTTAAATCTCTTATTGCCTATTCATCAGTCAGTCATATAGGCCTAGTAGTAGCCGCCTCTCTTATTCAAA CCCAATGAAGCTTCACCGGAGCAATTATTTTGATAATTTCACACGGCATAATTTCTTCAGCCCTATTTTG CTTAGCAAACACAAACTATGAACGAATACATAGCCGAACAATACTTTTAGCCCGAGGATTACAAACAGTA TTTCCACTAATAGCCACTTGATGATTAATCTTAAATATATTTAATATAGCCCTACCCCCTACCCCAAATC TTTGAGGAGAACTGACAATCATAGTCTCACTCTTTAATTGGTCTCCATGAACCATCCTTATTACAGGACT GGGAACATTAATTACTGCCGCCTATACCTTATATATATTTCTAATAACCCAACGAGGACAACTCCCTAAA CACTTAAAACATGCCTCTCCCACACTTACCCGAGAACACTGCCTAATGATAATACATTTAATACCAATAG CTCTCCTTATACTAAAACCAGAGCTTATTTCTGGGGGGTTCCCATGTATATATAATTTAATTAAAATATT AGGCTGTGATCCTAAAAATGAAAGTTTAATCCTTTCTGTAAACCGAGAAGAATTTAGAAATACAGAAATT GCTAACTATCTGATCTCGTGGTTAAATTCCACGATCTCCTCAACTTTTAAGGGATAATAGTTAATCCATT GGCCTTAGGAGCCAAAACTCTTGGCGCAACTCCAAGTAAAAGTTATGGACTCTATATTAATCTTTAACTC CTCCCTTATTATATCTCTCCTCTTCCTTATTATTCCCCTTACTACAAATATAACAAAAAATTGACACATC TTTGTAAAAACATCTACCAAATTATCCTTTTTTACTAGTACATTACCACTGATAATTTTTATTAGTCAAG GGATAGAATCAACAGCAATTAACTTCAATTTTATAACGATTTATAATTTCAACATCTCCTCAAGCATTAA ATTTGATCAATATTCAATTATATTTTTACCAACAGCCCTATTTGTCACATGATCTATCCTTGAATTTGCT ATTTGATATATACACTCAGACCCTATAATTAACCGATTTTTTAAATATCTTCTAATATTTTTAATGGCTA TGATAATTTTAGTAACAGCAAACAACATATTTCAATTATTTATTGGATGAGAGGGGGTTGGTATTATATC ATTTCTCTTAATCGGATGATGACATACCCGAGCCGATGCCAATACCGCTGCAATACAAGCCGTAATATAT AACCGAATCGGAGATATTGGACTTATTATTACTATAGCCTGAATTGCAATAAATATAAATTCATGAGAAA TTCAACAAGTATTTATAATAGAAAATAAATCTATAATTCCCCTTCTAGGACTAATTTTAGCAGCAATAGG AAAATCTGCCCAATTCGGACTTCATCCATGACTTCCAGCAGCTATAGAAGGCCCCACCCCAGTCTCAGCT TTACTACATTCAAGCACAATAGTTGTAGCAGGAATCTTTCTACTTATTCGATTTCAACCAATACTTGAAC AAAACCCTCTATCCTTAACAATCTGCCTTTGCCTCGGAGCTTTAACCACCTTATTTACAGCCGCATGCGC TTTAACACAAAATGATATTAAAAAAATTGTAGCCTTTTCAACATCCAGCCAGCTAGGCCTTATAATAGTT ACAATTGGACTTAACCAACCTCAACTAGCATTCCTTCATATCTGCACCCACGCCTTTTTTAAAGCAATAC TATTTTTATGTTCCGGTTCCATCATCCATAACCTAAATAATGAACAAGATATCCGAAAGATAGGCGGACT GCAAAAAGCACTCCCACTTACAACAACCGCCCTTACTATTGGTAGCCTAGCACTAACAGGCACTCCATTC TTATCCGGATTCTTTTCTAAAGATGCTATTATTGAAGCTATAACTACCTCAAGCCTCAACCATTGATCAT TAATTATTACAATAATTGCAACCTCATTTACTGCAGTCTACAGCCTACGAATTATTTTTTTTTCATCAAT AAGCCCCCCCCGACTTTTACCCCTCAACCTCATTAATGAAAATAATAAACTTATCATAAATCCAATTAAA CGTTTAGCCTGAGGAAGTATTATAATAGGATTTATTATTTCCTCTAATATATCACCAATTAAACCACAAA TCATGACAATACCAATAATATTAAAAATATCAGCACTACTAATTACCATTACAGGACTTATTCTAGCCCT AGACACACTCAACCTCTCATCAACAACCAACTTAAAAACAAAAATATATACATTTTCAAATATATTAGCA TTCTTTCCCCTCATCATCCATCGCCTTTTACCAAAATCAAAAATATTAACAGGCCAAAACTTAGCCACTA ATCTCACAGACCTAACCTGATATGAAAAATCGGGTCCAAAGGGCATTTCTAACCAACAGCTGCCACCAAT TAAATCTAATATAGAACTTCAAACAGGATTAATTAAAACCTATATACTAGTAACACTTACCTCTACCCTT TTAATGGCCTCCCCAGTCCTAATTAATTATATCAACTTACCCAAATCTATAATTGATAGAAATTTACACC AAATCAATACTACCGCAGTTTAAGAAAACATCAGCCTTGTAAGCTGAAGAATGGGGATTTAAAATCTCCC GATAGTCCGGGCTCCGCCTAAGGACGTAGACTTAAACCCAGGCAGAGCCTGGGAAAGAATCTAATTTAAA TATATATTCCACATGCGAGTAAAAAGGGGGGGGGTCCTGGCTCTATCCAGGCCCTGCCTTGAGGCATTAT TACCAATCCAGGCTCTACCACCATATAACCCAACCCCACATACCCATATAAACCAAAAGTCACCTAAAAA CAACTACCGCTTATGTCCTTTCTTCACTATAGTAACGCGGTGACATATTATGTATAATAGTGCATTCATC TAATTTCCATACGAATCTGTTTTAGTACCCTCCTGGTTTTTAATTTCACACACGGTAGAGAAATAAACAA CCCGCCCCTCCAGACACGATGTCCAGATCTAAGGACCTATATTGTAGGTCCGCAGCTCGCTATCTTCACG AGACCACTGGTTATGAATCTATGTGCACATAGGCAAGAGTAGGCGGTAACAGTACGACCCCCATATAGTT GAAGGTGATGCTCTCAAGAATCGGCGTACCCCGCACCCACATAACTGGTCTAGATGCATTCATTATTTTT TTTTCTCTTGTGAGGTCAGCCAACACCCAATTTATAACTGGTAAATCTGGCTCTAAAACCTGAACATATA ATGCCCGTGTAGTCTTACTATATACGCATGTTTTAATATAAGTCAATGTTGTATGGACATACACCTTCGT ATTCCTCTGCCTGATTCCCAGAATATTACCTCCCAGTTTCCCCCCCCTCTTGCATTTCACAAAATAATTT TATTATACAATATATTTTTCTACTTTAAACCCCCCTCCCCCAAAATATAGGCTAATCGGCGCCTGAAATC TTTAGTCAAACCCCGAAACCTAAAAACCCATCACACTCACGCACTGAAATAACAAATGATTAATAATAAT TTTATTAACTTTTAATATATTTTAATATATTTTAATATATTTTAATATATTTTAATATATTATAAGATAT ATTAGTGTAACTTACTAAAGCACGGCACTGAAAATGCCAATATAAATAATAATAAATTTTATAAACACTA AAAGGTCTGGTCCCAGCCTTAGTATAAATTTTTAATATGAGAACTTATATAATATATTTAAAATTTCTAA CCAACAGCTGCCACCATAAACCAATACAACTTTTTAACCAAATTTACCAAATACATAAACCCCTCACAGC ACGTAAAGATCCACGAGATACCCCACGAGTAATTTCTAATACCGTAAATAAAGTTAAAAGAAGAGCCCAC CCAGAAATAACTAAAAACACCGCCCCCAAAGTATATAATGACCCAACACCTATACAGTCAGAAACCACAA TATTAACTCCCATTTCCTCCACCAAAAAGAAATCCCCTAAACCATTAATACCACACATCAATATAAAAAA AATGACCCCAACTAAGTATATAAAAATATAAATTAAAACAGACCAATTCCCCCAAGCCTCAGGATAAAGC TCAGCTGCCAAAGAAGCAGAATAAGCAAATACAACTAATATTCCCCCTAAATAAATTAATAAAAGTACAA GAGATAGAAACGAAATACCAAAATCAACCAAAACCCAACACCCACAAACTGCACCTAATACAAGACCCAA AGCTGCAAAATAAGGAGATGGATTTGAAGCCATGGCAACAAAACCAATAATTAATCCAATCACAGCTAAA AAACTTATCATAATTTTCATTCGGATTTAACCGAAACCCCTGACCTGAAAAATCAGTGTTGTATTCAACT ATAAAAACTAATGACCCACACCATACGTAAAACACACCCCCTACTTAAAATTATTAATAACTCTTTTATT GATCTCCCAACCCCAGTAAATCTATCATACTGATGAAACTTCGGATCATTATTAGGTATCTGCCTAATAA TACAAATCATTACAGGCCTGTTTCTAGCAATACACTATACAGCAGATACCACTTCCGCATTTTCATCAGT CGTACATATCTGCCGAGACGTAAACTATGGATGATTAATACGAAACATTCACGCCAACGGAGCTTCATTC TTTTTTATCTGTATTTATCTTCATATTGGACGAGGAGCATACTATGGATCCTATAAATATAAAGAAACCT GAAATATTGGAGTTATTCTCTTATTTTTAGTTATAGCAACAGCATTTGTCGGATATGTTCTCCCATGAGG ACAAATATCATTTTGGGGTGCCACTGTAATTACCAACCTTCTCTCAGCAATTCCATATATAGGAGATATA TTAGTACAATGAATCTGAGGTGGATTTTCAGTAGACAAAGCTACCCTTACTCGATTTTTTGCCTTCCACT TTATTCTTCCGTTTATTATCTCGGGAGCCAGCATCATCCACCTTCTATTTCTACATGAAACCGGCTCTAA TAACCCAACAGGCTTAACCTCTAACTCAGATAAAATTCCATTTCACCCATATTTTTCATACAAAGACCTA CTGGGCTTTTTAATTATACTTCTTTTATTAATTATATTATCACTACTATCCCCAAATCTCTTAACCGACC CAGAAAATTTTACCCCAGCTAACCCGCTAACTACCCCACCTCATATTCAACCGGAGTGATACTTTTTATT TGCCTACGCAATCCTACGCTCAATTCCAAATAAATTAGGTGGAGTAGTTGCTTTAATTGCCTCTATTCTT ATTTTAATATTAATTCCAATTCTACACACCTCAAAACACCAAAGCATTACATTTCGACCTCTTTCACAAG TTCTATTTTGAATACTAATTGCAAACACACTTGTACTTACTTGAATCGGCGGTCAACCAGTAGAACCTCC ATTCATTGAAATTGGCCAAGTAGCCTCAACCCTATACTTTTTATTATTTATATTCTTCCTCCCACTAATA GGAGTAGCCGAAAACAAACTTATAAAATGATAACAATTTAAGTCGGAAGTGCTCCTAATAATCCAGGCGC CGCCACAAGAAACCCTAACTGAGCCCGGGCTCCGCCAAATATAATCTATTAATATATAAAAATAATTTTT AAGCAGGAAGGATTTACACCTTCACCATTGACACCCAAGGCCAAAATTCTAAATTTAACTACCGCTTATG TCCTTTCTTCACTATAGTAACGCGGTGACATATTATGTATAATAGTGCATTCATCTAATTTCCATACGAA TCTGTTTTAGTACCCTCCTGATTTTTAATTTCACACACGGTAGAGAAATAAACAACCCGCCCCTCCAGAC ACGATGTCCAGATCTAAGGACCTATATTGTAGGTCCGCAGCTCGCTATCTTCACGAGACCACTGGTTATG AATCTATGTGCACATAGGCAAGAGTAGGCGGTAACAGTACGACCCCCATATAGTTGAAGGTGATGCTCTC AAGAATCGGCGTACCCCGCACCCACATAACTGGTCTAGATGCATTCATTATTTTTTTTTCTCTTGTGAGG TCAGCCAACACCCAATTTATAACTGGTAAATCTGGCTCTAAAACCTGAACATATAATGCCCGTGTAGTCT TACTATATACGCATGTTTTAATATAAGTCAATGTTGTATGGACATACACCTTCGTATTCCTCTGCCTGAT TCCCAGAATATTACCTCCCAGTTTCCCCCCCCTCTTGCATTTCACAAAATAATTTTATTATACAATATAT TTTTCTACTTTAAACCCCCCTCCCCCAAAATATAGGCTAATCGGCGCCTGAAATCTTTAGTCAAACCCCG AAACCTAAAAACCCATCACACTCACGCACTGAAATAACAAATGATTAATAATAATTTTATTAACTTTTAA TATATTTTAATATATTTTAATATATTTTAATATATATTTTAATATATTGTAAGATATGCTAGTGTAGCTT ACTAAAGCACGGCACTGAAAATGCCAATATAAATAATAATAAATTTTATAAACACTAAAAGGTCTGGTCC CAGCCTTAGTATAAATTTTTAATATGAGAACTTATATAATATATTTAAAATTTCTAACCAACAGCTGCCA CCAATTAAATCTAATATAGAACTTCAAACAGGATTAATTAAAACCTATATACTAGTAACACTTACCTCTA CCCTTTTAATGGCCTCCCCAGTCCTAATTAATTATATCAACTTACCCAAATCTATAATTGATAGAAATTT ACACCAAATCAATACTACCGCAGTTTAAGAAAACATCAGCCTTGTAAGCTGAAGAATGGGGATTTAAAAT CTCCCGATAGTCCGGGCTCCGCCTAAGGACGTAGACTTAAACCCAGGCAGAGCCTGGGAAAGAATCTAAT TTAAATATATATTCCACATGCGAGTAAAGAGGGGGGGGGTCCTGGCTCTATCCAGGCCCTGCCTTGAGGC ATTATTACCAATCCAGGCTCTACCACCATATAACCCAACCCCACATACCCATATAAACCGAAAGTCACCT AAAAACAACTACCGCTTATGTCCTTTCTTCACTATAGTAACGCGGTGACATATTATGTATAATAGTGCAT TCATCTAATTTCCATACGAATCTGTTTTAGTACCCTCCTGATTTTTAATTTCACACACGGTAGAGAAATA AACAACCCGCCCCTCCAGACACGATGTCCAGATCTAAGGACCTATATTGTAGGTCCGCAGCTCGCTATCT TCACGAGACCACTGGTTATGAATCTATGTGCACATAGGCAAGAGTAGGCGGTAACAGTACGACCCCCATA TAGTTGAAGGTGATGCTCTCAAGAATCGGCGTACCCCGCACCCACATAACTGGTCTAGATGCATTCATTA TTTTTTTTTCTCTTGTGAGGTCAGCCAACACCCAATTTATAACTGGTAAATCTGGCTCTAAAACCTGAAC ATATAATGCCCGTGTAGTCTTACTATATACGCATGTTTTAATATAAGTCAATGTTGTATGGACATACACC TTCGTATTCCTCTGCCTGATTCCCAGAATATTACCTCCCAGTTTCCCCCCCCTCTTGCATTTCACAAAAT AATTTTATTATACAATATATTTTTCTACTTTAAACCCCCCTCCCCCAAAATATAGGCTAATCGGCGCCTG AAATCTTTAGTCAAACCCCGAAACCTAAAAACCCATCACACTCACGCACTGAAATAACAAATGATTAATA ATAATTTTATTAACTTTTAATATATTTTAATATATTTTAATATATTTTAATATATATTTTAATATATTGT AAGATAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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