Viewing data for Mandrillus sphinx


Scientific name Mandrillus sphinx
Common name Mandrill
Maximum lifespan 40.00 years (Mandrillus sphinx@AnAge)

Total mtDNA (size: 16546 bases) GC AT G C A T
Base content (bases) 6962 9581 4930 2032 4205 5376
Base content per 1 kb (bases) 421 579 298 123 254 325
Base content (%) 42.1% 57.9%
Total protein-coding genes (size: 11367 bases) GC AT G C A T
Base content (bases) 4791 6576 3580 1211 2943 3633
Base content per 1 kb (bases) 421 579 315 107 259 320
Base content (%) 42.1% 57.9%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1505 bases) GC AT G C A T
Base content (bases) 579 925 356 223 395 530
Base content per 1 kb (bases) 385 615 237 148 262 352
Base content (%) 38.5% 61.5%
Total rRNA-coding genes (size: 2501 bases) GC AT G C A T
Base content (bases) 1056 1445 612 444 574 871
Base content per 1 kb (bases) 422 578 245 178 230 348
Base content (%) 42.2% 57.8%
12S rRNA gene (size: 946 bases) GC AT G C A T
Base content (bases) 422 524 242 180 208 316
Base content per 1 kb (bases) 446 554 256 190 220 334
Base content (%) 44.6% 55.4%
16S rRNA gene (size: 1555 bases) GC AT G C A T
Base content (bases) 634 921 370 264 366 555
Base content per 1 kb (bases) 408 592 238 170 235 357
Base content (%) 40.8% 59.2%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 293 388 226 67 167 221
Base content per 1 kb (bases) 430 570 332 98 245 325
Base content (%) 43.0% 57.0%
ATP8 (size: 207 bases) GC AT G C A T
Base content (bases) 78 129 65 13 48 81
Base content per 1 kb (bases) 377 623 314 63 232 391
Base content (%) 37.7% 62.3%
COX1 (size: 1569 bases) GC AT G C A T
Base content (bases) 672 897 436 236 454 443
Base content per 1 kb (bases) 428 572 278 150 289 282
Base content (%) 42.8% 57.2%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 290 394 197 93 174 220
Base content per 1 kb (bases) 424 576 288 136 254 322
Base content (%) 42.4% 57.6%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 355 429 248 107 213 216
Base content per 1 kb (bases) 453 547 316 136 272 276
Base content (%) 45.3% 54.7%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 497 644 369 128 301 343
Base content per 1 kb (bases) 436 564 323 112 264 301
Base content (%) 43.6% 56.4%
ND1 (size: 955 bases) GC AT G C A T
Base content (bases) 422 533 317 105 244 289
Base content per 1 kb (bases) 442 558 332 110 255 303
Base content (%) 44.2% 55.8%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 427 615 346 81 253 362
Base content per 1 kb (bases) 410 590 332 78 243 347
Base content (%) 41.0% 59.0%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 135 211 103 32 97 114
Base content per 1 kb (bases) 390 610 298 92 280 329
Base content (%) 39.0% 61.0%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 568 810 446 122 357 453
Base content per 1 kb (bases) 412 588 324 89 259 329
Base content (%) 41.2% 58.8%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 124 173 92 32 83 90
Base content per 1 kb (bases) 418 582 310 108 279 303
Base content (%) 41.8% 58.2%
ND5 (size: 1812 bases) GC AT G C A T
Base content (bases) 742 1070 575 167 464 606
Base content per 1 kb (bases) 409 591 317 92 256 334
Base content (%) 40.9% 59.1%
ND6 (size: 525 bases) GC AT G C A T
Base content (bases) 207 318 173 34 103 215
Base content per 1 kb (bases) 394 606 330 65 196 410
Base content (%) 39.4% 60.6%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 16 (7.08%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 33 (14.6%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 9 (3.98%)
Leucine (Leu, L)
n = 48 (21.24%)
Isoleucine (Ile, I)
n = 20 (8.85%)
Methionine (Met, M)
n = 13 (5.75%)
Proline (Pro, P)
n = 13 (5.75%)
Phenylalanine (Phe, F)
n = 8 (3.54%)
Tyrosine (Tyr, Y)
n = 4 (1.77%)
Tryptophan (Trp, W)
n = 2 (0.88%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 12 (5.31%)
Glutamine (Gln, Q)
n = 11 (4.87%)
Histidine (His, H)
n = 5 (2.21%)
Lysine (Lys, K)
n = 5 (2.21%)
Arginine (Arg, R)
n = 3 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 10 10 5 7 29 4 3 10 1 1 1 6 1 4 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 3 8 5 0 2 2 3 1 4 4 4 1 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 8 2 3 3 3 0 0 4 1 3 0 0 3 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 0 0 0 4 1 0 1 2 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
36 77 87 27
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
17 71 41 98
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 78 93 42
ATP8 (size: 207 bases)
Amino acid sequence: MPQLDTSTWFITITTMLPTLYLIMQLKLLNMNYYRPPLTKNPNLQIHNNYQQSKWTKIYLPYSQLQQC*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 3 (4.41%)
Threonine (Thr, T)
n = 8 (11.76%)
Cysteine (Cys, C)
n = 1 (1.47%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 11 (16.18%)
Isoleucine (Ile, I)
n = 5 (7.35%)
Methionine (Met, M)
n = 4 (5.88%)
Proline (Pro, P)
n = 6 (8.82%)
Phenylalanine (Phe, F)
n = 1 (1.47%)
Tyrosine (Tyr, Y)
n = 6 (8.82%)
Tryptophan (Trp, W)
n = 2 (2.94%)
Aspartic acid (Asp, D)
n = 1 (1.47%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 6 (8.82%)
Glutamine (Gln, Q)
n = 8 (11.76%)
Histidine (His, H)
n = 1 (1.47%)
Lysine (Lys, K)
n = 4 (5.88%)
Arginine (Arg, R)
n = 1 (1.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 3 1 3 4 1 2 7 1 0 0 0 0 0 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 0 0 0 0 0 0 0 0 1 5 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 3 3 1 0 2 0 0 0 3 3 0 0 1 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 0 0 0 1 3 1 0 0 1 0 0 0 0 1 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
1 25 27 16
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 17 27 21
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 23 27 11
COX1 (size: 1569 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.0%)
Alanine (Ala, A)
n = 37 (7.09%)
Serine (Ser, S)
n = 33 (6.32%)
Threonine (Thr, T)
n = 35 (6.7%)
Cysteine (Cys, C)
n = 2 (0.38%)
Valine (Val, V)
n = 31 (5.94%)
Leucine (Leu, L)
n = 64 (12.26%)
Isoleucine (Ile, I)
n = 45 (8.62%)
Methionine (Met, M)
n = 31 (5.94%)
Proline (Pro, P)
n = 31 (5.94%)
Phenylalanine (Phe, F)
n = 40 (7.66%)
Tyrosine (Tyr, Y)
n = 20 (3.83%)
Tryptophan (Trp, W)
n = 16 (3.07%)
Aspartic acid (Asp, D)
n = 15 (2.87%)
Glutamic acid (Glu, E)
n = 11 (2.11%)
Asparagine (Asn, N)
n = 18 (3.45%)
Glutamine (Gln, Q)
n = 7 (1.34%)
Histidine (His, H)
n = 19 (3.64%)
Lysine (Lys, K)
n = 11 (2.11%)
Arginine (Arg, R)
n = 9 (1.72%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
25 20 27 7 8 36 1 11 6 1 6 11 13 1 19 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 1 6 19 11 1 9 17 19 2 7 16 8 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 13 1 8 7 12 1 1 4 8 12 0 1 4 14 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 9 2 6 9 10 1 3 2 4 0 0 0 1 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
141 118 145 119
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
79 131 102 211
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 187 196 124
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%)
Alanine (Ala, A)
n = 14 (6.17%)
Serine (Ser, S)
n = 12 (5.29%)
Threonine (Thr, T)
n = 22 (9.69%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 10 (4.41%)
Proline (Pro, P)
n = 16 (7.05%)
Phenylalanine (Phe, F)
n = 9 (3.96%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 9 (3.96%)
Glutamic acid (Glu, E)
n = 11 (4.85%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 12 9 4 3 18 2 5 6 1 4 4 6 0 3 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 4 4 5 1 1 4 4 2 3 4 9 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 9 1 2 4 4 0 0 2 2 7 0 1 4 5 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 11 0 4 5 4 0 3 0 3 0 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
59 62 66 41
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 62 56 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 73 98 48
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 23 (8.85%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 19 (7.31%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 14 (5.38%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 6 (2.31%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 6 (2.31%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 14 7 4 8 17 1 6 7 1 5 4 4 0 8 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 2 9 3 0 1 11 6 1 0 7 4 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 13 0 1 6 9 1 1 5 6 8 1 0 1 4 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 6 0 0 3 2 1 2 1 3 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
55 70 64 72
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 64 54 99
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 114 98 41
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 22 (5.8%)
Alanine (Ala, A)
n = 19 (5.01%)
Serine (Ser, S)
n = 28 (7.39%)
Threonine (Thr, T)
n = 35 (9.23%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 11 (2.9%)
Leucine (Leu, L)
n = 66 (17.41%)
Isoleucine (Ile, I)
n = 41 (10.82%)
Methionine (Met, M)
n = 19 (5.01%)
Proline (Pro, P)
n = 24 (6.33%)
Phenylalanine (Phe, F)
n = 20 (5.28%)
Tyrosine (Tyr, Y)
n = 13 (3.43%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 9 (2.37%)
Glutamic acid (Glu, E)
n = 3 (0.79%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 9 (2.37%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 28 16 7 20 28 2 9 7 2 1 2 7 1 5 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 2 2 6 10 1 1 14 6 1 5 6 12 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 12 2 5 8 10 1 0 4 5 8 1 0 5 12 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 3 0 2 7 10 0 2 2 4 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 109 126 81
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 102 72 157
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 158 145 62
ND1 (size: 955 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 22 (6.94%)
Threonine (Thr, T)
n = 35 (11.04%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 9 (2.84%)
Leucine (Leu, L)
n = 61 (19.24%)
Isoleucine (Ile, I)
n = 18 (5.68%)
Methionine (Met, M)
n = 20 (6.31%)
Proline (Pro, P)
n = 20 (6.31%)
Phenylalanine (Phe, F)
n = 20 (6.31%)
Tyrosine (Tyr, Y)
n = 11 (3.47%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 15 (4.73%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 7 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 12 19 7 18 28 4 3 5 1 3 4 2 0 8 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 5 14 9 0 1 6 4 1 2 13 5 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 17 1 3 5 10 1 0 3 4 7 0 1 7 8 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 0 2 1 7 0 0 1 6 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
63 93 98 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 102 56 128
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 122 135 51
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 12 (3.47%)
Serine (Ser, S)
n = 25 (7.23%)
Threonine (Thr, T)
n = 54 (15.61%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 60 (17.34%)
Isoleucine (Ile, I)
n = 38 (10.98%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.2%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 10 (2.89%)
Lysine (Lys, K)
n = 10 (2.89%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 24 27 6 15 31 4 4 9 1 1 2 2 1 6 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 4 7 1 0 1 6 6 2 0 11 8 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 26 0 1 13 8 0 1 2 2 8 0 0 2 16 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 5 0 0 1 9 1 0 3 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
39 98 152 58
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 107 64 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 141 146 49
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.34%)
Alanine (Ala, A)
n = 12 (3.47%)
Serine (Ser, S)
n = 25 (7.23%)
Threonine (Thr, T)
n = 54 (15.61%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 60 (17.34%)
Isoleucine (Ile, I)
n = 38 (10.98%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.2%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 10 (2.89%)
Lysine (Lys, K)
n = 10 (2.89%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 24 27 6 15 31 4 4 9 1 1 2 2 1 6 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 4 7 1 0 1 6 6 2 0 11 8 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 26 0 1 13 8 0 1 2 2 8 0 0 2 16 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 5 0 0 1 9 1 0 3 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
39 98 152 58
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 107 64 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 141 146 49
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (3.49%)
Alanine (Ala, A)
n = 26 (5.68%)
Serine (Ser, S)
n = 38 (8.3%)
Threonine (Thr, T)
n = 52 (11.35%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 6 (1.31%)
Leucine (Leu, L)
n = 86 (18.78%)
Isoleucine (Ile, I)
n = 43 (9.39%)
Methionine (Met, M)
n = 39 (8.52%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 21 (4.59%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 16 (3.49%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 8 (1.75%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 32 37 11 21 39 5 10 9 1 0 1 5 0 5 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 3 3 12 11 0 2 9 3 2 2 16 5 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 23 0 11 6 9 0 3 9 6 9 3 0 4 19 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 8 0 0 2 12 0 0 2 6 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 133 181 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
51 127 86 195
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 186 186 74
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 20 (20.41%)
Isoleucine (Ile, I)
n = 12 (12.24%)
Methionine (Met, M)
n = 11 (11.22%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 3 (3.06%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 6 10 3 5 9 1 2 2 0 0 0 2 0 2 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 0 4 3 1 0 2 1 1 2 1 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 3 0 0 3 4 0 0 1 1 2 0 0 0 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 0 2 0 1 0 0 0 1 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
17 27 36 19
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 25 17 48
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 40 37 16
ND5 (size: 1812 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.15%)
Alanine (Ala, A)
n = 40 (6.63%)
Serine (Ser, S)
n = 45 (7.46%)
Threonine (Thr, T)
n = 68 (11.28%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 11 (1.82%)
Leucine (Leu, L)
n = 98 (16.25%)
Isoleucine (Ile, I)
n = 53 (8.79%)
Methionine (Met, M)
n = 40 (6.63%)
Proline (Pro, P)
n = 31 (5.14%)
Phenylalanine (Phe, F)
n = 35 (5.8%)
Tyrosine (Tyr, Y)
n = 18 (2.99%)
Tryptophan (Trp, W)
n = 13 (2.16%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 9 (1.49%)
Asparagine (Asn, N)
n = 37 (6.14%)
Glutamine (Gln, Q)
n = 21 (3.48%)
Histidine (His, H)
n = 13 (2.16%)
Lysine (Lys, K)
n = 22 (3.65%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
24 29 38 15 27 50 2 4 21 0 2 3 6 0 11 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 2 8 24 8 0 1 14 9 1 3 13 15 0 16
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 29 1 2 15 15 2 1 10 11 7 0 0 13 24 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 8 1 4 7 22 0 1 4 4 0 0 0 1 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
96 168 231 109
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
62 173 132 237
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 234 243 118
ND6 (size: 525 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (16.09%)
Alanine (Ala, A)
n = 8 (4.6%)
Serine (Ser, S)
n = 10 (5.75%)
Threonine (Thr, T)
n = 7 (4.02%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 26 (14.94%)
Leucine (Leu, L)
n = 21 (12.07%)
Isoleucine (Ile, I)
n = 11 (6.32%)
Methionine (Met, M)
n = 13 (7.47%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 9 (5.17%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 4 (2.3%)
Glutamic acid (Glu, E)
n = 10 (5.75%)
Asparagine (Asn, N)
n = 4 (2.3%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 3 (1.72%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 0 6 1 0 0 0 10 0 0 12 0 7 7 9 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 2 0 4 1 1 2 16 0 3 9 3 0 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 3 2 4 0 0 2 4 0 8 1 3 10 3 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 8 4 0 0 1 1 0 0 2 0 1 0 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
76 7 41 51
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 24 28 80
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
54 3 34 84
Total protein-coding genes (size: 11421 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 209 (5.49%)
Alanine (Ala, A)
n = 230 (6.05%)
Serine (Ser, S)
n = 266 (6.99%)
Threonine (Thr, T)
n = 388 (10.2%)
Cysteine (Cys, C)
n = 23 (0.6%)
Valine (Val, V)
n = 140 (3.68%)
Leucine (Leu, L)
n = 630 (16.56%)
Isoleucine (Ile, I)
n = 335 (8.81%)
Methionine (Met, M)
n = 244 (6.41%)
Proline (Pro, P)
n = 207 (5.44%)
Phenylalanine (Phe, F)
n = 207 (5.44%)
Tyrosine (Tyr, Y)
n = 135 (3.55%)
Tryptophan (Trp, W)
n = 101 (2.66%)
Aspartic acid (Asp, D)
n = 62 (1.63%)
Glutamic acid (Glu, E)
n = 84 (2.21%)
Asparagine (Asn, N)
n = 175 (4.6%)
Glutamine (Gln, Q)
n = 102 (2.68%)
Histidine (His, H)
n = 102 (2.68%)
Lysine (Lys, K)
n = 93 (2.44%)
Arginine (Arg, R)
n = 65 (1.71%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
141 194 214 73 139 302 28 75 92 10 35 34 60 11 81 126
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
30 8 15 44 111 69 6 35 85 66 23 33 99 73 2 67
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
145 163 13 41 73 88 8 11 45 58 77 8 13 48 127 27
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
75 70 14 23 39 87 6 13 17 33 2 0 1 5 1 93
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
725 1018 1292 770
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
455 1035 759 1556
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
176 1401 1490 738 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​M​a​n​d​r​i​l​l​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ s​p​h​i​n​x​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.